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Gene list

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COG category: Unclassified
Gene type: CDS
Genomic element: megaplasmid

Number of genes found: 43

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# Shewanella oneidensis MR-1, MR-1

>gid:864761  SOA0001  replication protein RepA
MDRSENALLPIPVTENLNSGKLLTISSTTSVQPNVLLRTGVFTPVGRRTN
ANDVKAQDLSNDLVNLDVCQKEGYDLVTVRGQRLNIETDFKVWCGIVLVF
SKYGYSSNTVKLTFSEFAKFCSYPSRRFDKNLRKQIGDSLGRIQSQSLSF
RRKNSEKAVHTGMLLRAMYDGEEDIVELMADETLWDLYRLDYQVLVSLRV
LEKLPRAEVAQCLYLYFTSLPENPHPVSFERLRERLRLETSKKEANRKIK
TGIQKLESIGYLSGSFAVKNGEQYYLIDQRYKKLEAAITGSLF
>gid:864763  SOA0003  type II restriction endonuclease, putative
MNSLMTGLIKVDNITRSGLTIYDRIRTGDQQFWLTSEELSAVLNLRLKGT
SFYGLAIRTRSKVAKELVCNALGYKVPSSFVKCQPRFSGQMFDTYVQKSN
NLQVWNEELDVERRYVIIRTDENDIITQVKVIAGSDLAVLDTTGTLTQKF
QARLTLSDQKMELISHFDTLNIQKILAPISLNLEIDSPVSQPQNGKLLPI
GECFRRLSKIVGCSFTDAGRTQERNRGAALHALVCKALGYTDYRDNGQFP
DIKHQLLEVKLQTSPTIDLGLVCPNSQANLDIEQLGLQQIRHCDVRYAIF
YGYIVNGLVHITNLYLTTGEDFFNRFEQFGGKVLNKKIQIPLPRDFFS
>gid:864765  SOA0005  hypothetical protein
MSKLTGVTGLNRRKSGKESQESPKPQEKITTVSTRRNITTGTSPLPLRLT
ENDRADLNLWLEALEAESGKNITAAKLFRGLISMRDKINTKALIRAINDV
T
>gid:864767  SOA0007  hypothetical protein
MYENKHGTPEHARMQPMRFLKLKSTAPRANGAAYKHALIVDAPRRFAPSS
QRTETSLSRQKNHLIEGAHDSGKTRWLVRLYENWADIWGAKIQEEPLYLS
ALEPITDWIDAPHVEAWWAEVECERALAADEPPRKWYKLSQKHKLEALSN
YLHATKTLLFLDDAHRLTGRKLQVARQCVLGSKYWIISCSSENRLPPTLR
TIVERGAPQRTRLESDASYDSTKVLMWMLIVGFAAAGVWEAAIVLGGFQM
LGTGRRAARAD
>gid:864768  SOA0008  hypothetical protein
MLIKRYAQILWISGFLLSNTACARDPWNDKEQKPDIRPFEVPRLQGDTQY
QDPIPSLLPAPEIDPDSIYTAALNCYPEESKFKVDVDLVAGYRRVSDQYD
TSGWPALSEHYIGVVGKIPLLSDSEDSRARDREYLRRTRTAEAVAGFAQA
LANRNFAYREIGLYMALEARAIVRVGKGIAPTEEQITMMEKVAEAQRNVT
KYSAEAVQFRLAIIAMCDDQKAPVLNDYLKQIAFLPKAK
>gid:864769  SOA0009  hypothetical protein
MPFYLKLNKRGNAMKTMRWKQVIIYSSIMSATFYIAAFAYFWLQPVPPMR
CMNELSELADIALQEYKAGRTKAFTQDMYFNEETKQWCYFDEVD
>gid:864771  SOA0011  conserved hypothetical protein
MKHYQEIFSKIKAAIANAPRNQATAEMHLQMIKYADQLEHITAKEFCEGT
DLKASFGTEFSKMRNISARLKAAGLDVAKI
>gid:864774  SOA0014  hypothetical protein
MPARVTCYELLLVLAVLPYNGWEALKAQIFR
>gid:864775  SOA0015  hypothetical protein
MRAHCCLAHTVACRGKSKGELVIATVRPAAMRAQSATPNARLSGASGI
>gid:864787  SOA0030  hypothetical protein
MASRNVEPRQACLPLVDHVIAGSEAKSPTEGNAQFKTNLL
>gid:864790  SOA0033  hypothetical protein
MGKVTGIPFSEVKAQLMDNPEVVAAYEQAVQADEPIHIIPVQHSEGVIMP
INNIVSCTRQPNRASFSFVNLFGGHHYPVTMIFMPSGAVNVVVAGARYRC
QANQVQRVIDESGLEHEGLACLKYSIEAGELNFHIPADVHEQLKEHPEFQ
KCRLIEWEDEEM
>gid:864791  SOA0034  hypothetical protein
MSQRAIEIVKISDLKSVKQGEVFEWCIDYEEFQWRKGDSILRSRTGVDSP
WEIWPLTDNTKTAVNRKVFTLIK
>gid:864796  SOA0039  conserved domain protein
MSDGIRPEQIVDINFFWSWYEKEYSELEIYVTVIDGVLTKVRFSDCPYHF
SDDIVLTFEEVKAKKPHFTYAQVKQALLDGYLCPLSNDSKAPEPTPPNDD
NTRKVVSFGDFQDRLESKRDRLENASSKAAAESNKFYESSRSLASCIPFG
QPILVGHHSEGRARRHADKIFNDMGKSVAASKKAGYYADRAASVGTNGIA
SDDPEAIAKLKEKLAGLERSQETMKAINKVIRSKHMTDADKIEYMTQTHK
LTEKEAEELLKGDFCGRVGFASYSIANNSATIRTVRDRIEDLEKLHNQEA
LSASGKIEGLSWALYEEDGRIKITFDDIPSEALRLTIKNYAFKWSRYSKA
WVRKITPNAIYSAKQLIGKLTEN
>gid:864797  SOA0040  hypothetical protein
MQRIYELKKSGNSTVIRIPYDELKANDCAAGDKVIMSFHKVKTPRENWFN
KVSAAQAQEEVELMNKDFSNVDLELTDEWGTEW
>gid:864799  SOA0042  hypothetical protein
MSKFLFITLLAVISASFTTHANDYFVSINVLDSQKQSLSIPLTLIASEPA
GYKSDLEKIPYPVKECSSSNGKITERFYGKEFKRGYAINFSSGLPDKEFK
VTEYLIDDKEYPLYDFKKDCFANQVVQIVNEYSFTLNVLQATSKIVELQS
GGEVSIMVHASK
>gid:864800  SOA0043  hypothetical protein
MGIFWGFSIFARRLPYEAAKVSGDFQAKKNALNECVFCKRGGLIFACQ
>gid:864803  SOA0046  hypothetical protein
MAEILANNIMPITIFLPAINLSVFLSFIGINQL
>gid:864804  SOA0047  hypothetical protein
MFPNRDFRKMLSYEKDVKINDETFSFKYKIVTGELSCKKDDILIFHQFLW
LPYKTFNIKINEKDYKLKTILLPINKCSLYYGKVPICRDLFPRLKRYTLI
SFTLSTIKKIAIVIALIFT
>gid:864808  SOA0051  hypothetical protein
MARNKVIQVACPPDLYSKIKDYKGAKNLASDADAMRELTLFALRIIEHSN
DKDEGISTRELLEVLLDNVIKIHHQTSINYYQNFNAEQYNANMKEPDVVP
SYKRLMAKAEERTQQILAGDNP
>gid:864812  SOA0055  hypothetical protein
MTSTAVACSILITTLLRNIVLISFDDAQPNSARRSAKCFSIAVREQLPLL
CSCAVVIPSEKFFITSSCLVVRVGKSSFSRLFSFSFWVIVLLLYRKNNMF
YHQNE
>gid:864813  SOA0056  hypothetical protein
MKKKYKPSTTSKTELIAFRCPVELKKKINDAVEKQQFQSVTDLIVQSVSE
KLGGESDLGS
>gid:864814  SOA0057  hypothetical protein
MCDEQLKYGVDFEAKVHYIARYYIVFYVVYFSKLECVGGGSLTLSIRQRS
RLTEWVGFFVPKFQGIERSLIFAIV
>gid:864819  SOA0062  hypothetical protein
MDNPRSKIVIDDNDEDISLLKVLAATSSKAAPLTDRQLKEVEAQSETLGF
KRRENRKRSPYIIQKNIKIRVGMDELLGEIGKAIGSKSDQETFDIAISKL
VESIGSVRLSSMLEELSKR
>gid:864823  SOA0067  hypothetical protein
MKSYPKKDRDQALSVLQKLAENDEQLTQPQAVKLALLDQYLIKNRELVAS
EFIDRFRYIEYELTELAIIQRVAFDNFAEFTNCLTLAGRFGCLVRLVRGG
YFSGTDSLHIWPLLAALAINDSPTIAAYKKQFVPPFVTGHKVTVLACNAV
YAILGVTPVTDNLREKLTSLKDSKYSMAMLRSLAAIINQDMDSFIDNISI
MVKSNRSQQEYSPLEKCYCVNAHGLVNLWRFHTTNAPLRQLDLPLPWQNE
LNAFFTSGHESIPITFDPLGECDLSNLPIDQNTLVLIHSLTT
>gid:864830  SOA0075  hypothetical protein
MFSRDKMKKSESNIKAIDDFVDGADSNIRTKKVVDKKKPVSFSATDKQLA
EIQGLVKKYNALAYKNDNRQEINRSDLIMAMKSHFEKMSDIEFYKEINKL
GSVDLSRVIFRQHAKTL
>gid:864843  SOA0094  hypothetical protein
MDKNTANDDDQDHHRPVPQSRIKVTKLISQFQYGG
>gid:864851  SOA0104  hypothetical protein
MNSPMLKWASRRGVGRCEGDEQVVFIILCHFSKIFKNRNDT
>gid:864854  SOA0107  hypothetical protein
MTQNYEHYHGCRPQSSFVHDDKNIYPIKFFFSTSEILESFNDFEDESLPD
SFRKYEMLSFAYDPGSDIYSISLSKVDFGKVYFYVLHEDAEIFGIWSSFQ
LFIESIVDDSNV
>gid:864858  SOA0112  lipoprotein, putative
MQNKHSIFPLAPAALLSLLLAGCGGDKGFLDPVPEVSSLTASPQVFVLKQ
GETQRVDLTQSVVAKNVASWKIADLDDKTGLGTILNPQATYFDYQATQSG
AGSFNYTVKGDNLTATSQIVLAVNAGETPGNNIPVADNITLSTFNNVDAI
IDLSAYITDADGDTLRINKLVSASNRFTLNGFQVTFAPDGFVGVDQAVYS
VDDGRGGYALAYIVVTSNDANPPAPNTAPVAKDDSLSMDVAKQSVLNINL
SGLISDADGDSLKVVTLYSHNDRAVLKENASVDYTPGNFRGVDQFTYLVS
DGKGGYDLGTVTVTVGDSTPPTPPTPSLVAYQQAFVLDVDQLQTIDVTQS
VTSEHLDAWSLTTVQDSTNLGVVSAKTATTFNYLAQTPGVAQIDYSVQGG
SLSANSTITVAINAPVTPDNHRPEAQDTQLETLNNASKTIDLQGKISDVD
GDTLSITLHGSARFSLNGTQVTFTPNGFVGLDQAVYSVEDGKGGYALANI
VAISEDANPPVPNMAPTANDAQFTLDVAKNVTFNIDLVAQRLIADADGDA
LSIAHIYTANNRATKQGATGITYTPGAFRGVDQFTYVITDGKDGYAINAI
TVVVNDSTPANKIPTAGPVTAKMLHNDPAITISVNSAVSDADGDTLKIVS
ISGALGQASINPANALEMLYEPKGFVGTDRFVYVVSDDNGGYAMGEVTVT
VTDSNPTAPVANTVQENTLLDTPINIDLSAYISDKETETANLVISNVTNA
TSPAVATLSGQTVIYTPNGFTGNDILTYTVTDGRHSTNGTIVISVNAHGA
HAIQADNLEGGTEPNAPFIHDLSALISTTDPTAGELIVVNAIGGALGTAT
VTNNILTYTPKLGVFGKDRLIYTVKDSHNPAHYTQGTISITIFAPAKPEI
TKLEAKKETDGYLKAYVTCRTCDVTQYKYAWIINGLTKSTGETYIPTAAD
DGFNIRLEVTGQDAYGQVTEMQYVVYAFSKVETIFSAKYTFAALKTDGSV
VTWGYSDYGGDSSSVAGQLTSGVKVIYSNSSAFAAVKEDGSVVTWGSYYD
GGDSSSVAGQLTSGVKVIYSTGSAFAAVKEDGSVVTWGSYGGNSSSVAGQ
LTSGVKVIYSTDNVFGAFAAVKEDGSVVTWGGSSYGGDSSSVAGQLTSGV
KVIYSNSGAFAAVKEDGSVVTWGNSGAGGDSSRVAGQLTSGVKVIDSTNN
AFAAVKEDGSVVTWGNSGAGGDSSSVAGQLTSGVKVIYSTNNAFAAVKED
GSVVTWGDSGAGGDSSSVAGQLTSGVKVIYSTGSAFAAVKQDGSVVTWGD
SGYGGDSSSVAGQLTSGVKVIDSTNNAFAAVKEDDSVVTWGSSGNGGDSS
SVAGQLTSGVKVIDSTSSAFAVVKEDGSVVTWGRSFYGGDSSSVADKLAP
NLFLIETSIN
>gid:864860  SOA0115  lipoprotein, putative
MQNKHSIFPLAPAALLSLLLAGCGGDKGFLDPVPEVSSLTASPQVFVLKQ
GETQRVDLTQSVVAKNVASWKIADLDDKTGLGTILNPQATYFDYQATQSG
AGSFNYTVKGDNLTATSQIVLAVNAGETPGNNIPVADNITLSTFNNVDAI
IDLSAYITDADGDTLRINKLVSASNRFTLNGFQVTFAPDGFVGVDQAVYS
VDDGRGGYALAYIVVTSNDANPPAPNTAPVAKDDSLSMDVAKQSVLNINL
SGLISDADGDSLKVVTLYSHNDRAVLKENASVDYTPGNFRGVDQFTYLVS
DGKGGYDLGTVTVTVGDSTPPTPPTPSLVAYQQAFVLDVDQLQTIDVTQS
VTSEHLDAWSLTTVQDSTNLGVVSAKTATTFNYLAQTPGVAQIDYSVQGG
SLSANSTITVAINAPVTPDNHRPEAQDTQLETLNNASKTIDLQGKISDVD
GDTLSITLHGSARFSLNGTQVTFTPNGFVGLDQAVYSVEDGKGGYALANI
VAISEDANPPVPNMAPTANDAQFTLDVAKNVTFNIDLVAQRLIADADGDA
LSIAHIYTANNRATKQGATGITYTPGAFRGVDQFTYVITDGKDGYAINAI
TVVVNDSTPANKIPTAGPVTAKMLHNDPAITISVNSAVSDADGDTLKIVS
ISGALGQASINPANALEMLYEPKGFVGTDRFVYVVSDDNGGYAMGEVTVT
VTDSNPTAPVANTVQENTLLDTPINIDLSAYISDKETETANLVISNVTNA
TSPAVATLSGQTVIYTPNGFTGNDILTYTVTDGRHSTNGTIVISVNAHGA
HAIQADNLEGGTEPNAPFIHDLSALISTTDPTAGELIVVNAIGGALGTAT
VTNNILTYTPKLGVFGKDRLIYTVKDSHNPAHYTQGTISITIFAPAKPEI
TKLEAKKETDGYLKAYVTCRTCDVTQYKYAWIINGLTKSTGETYIPTAAD
DGFNIRLEVTGQDAYGQVTEMQYVVYAFSKVETIFSAKYTFAALKTDGSV
VTWGYSDYGGDSSSVAGQLTSGVKVIYSNSSAFAAVKEDGSVVTWGSYYD
GGDSSSVAGQLTSGVKVIYSTGSAFAAVKEDGSVVTWGSYGGNSSSVAGQ
LTSGVKVIYSTDNVFGAFAAVKEDGSVVTWGGSSYGGDSSSVAGQLTSGV
KVIYSNSGAFAAVKEDGSVVTWGNSGAGGDSSRVAGQLTSGVKVIDSTNN
AFAAVKEDGSVVTWGNSGAGGDSSSVAGQLTSGVKVIYSTNNAFAAVKED
GSVVTWGDSGAGGDSSSVAGQLTSGVKVIYSTGSAFAAVKQDGSVVTWGD
SGYGGDSSSVAGQLTSGVKVIDSTNNAFAAVKEDDSVVTWGSSGNGGDSS
SVAGQLTSGVKVIDSTSSAFAVVKEDGSVVTWGRSFYGGDSSSVADKLAP
NLFLIETSIN
>gid:864861  SOA0117  hypothetical protein
MTLFKLILESVMTSIIKRTQRDYSLAFKLAVVDQVEKGELTYKQAQDKYG
IYRVSLVTQAWQTGLVPRNTVYINARTVDD
>gid:864864  SOA0120  ISSod12, transposase
MSKPRYKTTNWKQYNQALINRGSLTFWIDEDAIAKWKAKVEPPKKGRPQL
FSDLAITTALMVKRIFSMPLRALQGFINSVFKLGDIPLSCPHYTCISKRA
KTVNIAFKTKTRGAIEHLAIDSTGLKVYGEGEWKVKKHGTDGKRRVWRKL
HIAVDTHSHEIIAAELSLSGVTDAEVMPNLLQQTHRKIRNISGDGAYDTK
ACHEAVRRKRALVLIPPREGAALWEKGHPRNLAVSWQQLHGSNKQWKKRY
GYHRRSISETAMYRIKQLLGGTLSMRNYNAQVGETYAMIRALNKLTGLSM
PETHYVA
>gid:864865  SOA0121  hypothetical protein
MFYSEALTRLMGKLIGDADQICGYGFSSTYLGNKAMFIKYR
>gid:864868  SOA0127  hypothetical protein
MRILAHLCVPVVPVVPVVPVVPVVPVVPVVPVVPVVPESLSP
>gid:864871  SOA0131  hypothetical protein
MDYITMKKIFYWNIFTILVLLLYPLIQGVFFSEVRQISFVENGKRISTKI
SHTAGFATIITSVDSEPIFINIAIALKFTDEKIIYIPFSRKSNKNGFVIN
KIRIIEHWPIDPFNIYYVIMYKKNKAIVHMSNKKLELTRDI
>gid:864877  SOA0139  hypothetical protein
MIERWIKPLHSPSFDALLWNPVIYIGASVFSTCFLVLKRVRQGLRGGTWK
DRVSICLGMICLGPLIVFSFMLSFGTYWHMLTKKPASQVEVVAELPSTWS
STGRGSCTGKLWVHPPGEPQHERILCYVPKELWAELKVGDRLLLNGDRSS
VAFTPADILILPN
>gid:864878  SOA0140  hypothetical protein
MTIVKYKAVNPVIGITVLGIAVMLAACDNSSTDSNNISIPTEREYQIISS
ETNLTDRDYSGNNNTMQARMILKYQLQSTHNDAATLSSPLSTSGNFIITP
SLLQFADRAIPLPISNIDERIQSNELSLMIKDGFNLSVNEGEVMALSPID
KPQEQDLAKMFEQWDNLKSLFQQVPMLPVKLEPKVGFSKVSPKDKHLTWT
VEQVTEDTLVAVLQGENTESPEQYQKTYGAFEVDRKTGWLNSLVLINQSM
RNGRLVNHRLAMAPKDKPFVMSIIWHAYADYDALRIAEDSQRTLNDIHKD
NLIYQDMDSQIVQALLPEHQGIIDNIGSWGEDAMKELQLRFVHGLTKKYF
SGEVLYQDIQAFDDKNNPIDIQFWQHNRSWVNNYGGKIESASDLLPIGWD
NTASKIKKINHISAKLTLIPEKNRLVTRPWSELLAKPYHFGGASLQITLI
DANTHLYKVVMRQTAEKGININFSQFNGQMGDAMVDQGYPTWLSASEQDL
LNVLFKYGEKHVNSNATAFLLKLTDIPETMSFYETEPQPQMAHTNPVTFM
HISDYYKDLANPTSGFDYSRETDFFLTDPSQLQLSVKEISDVKDIKSISD
DGHNFYIPMSPALAMSCKPEIEQGFTEGKQPVTWVYDTKALTGPAYHLAS
PDGVRRYFYDKKIQGKIHCQGDVTWQHVTLQPGERPWLVDIGPWLTQPSM
AENPSELLKQYFKIQDDEGTNLTIRLPENSAELSIKDVLVDGKFISVSGA
AAKVSIMQISAKPIELPYQFTFKPLP
>gid:864884  SOA0147  hypothetical protein
MHILVFEVTSAMSSVTANTTENQIDFTGSVEKSLSGFLSGTGGVF
>gid:864885  SOA0148  hypothetical protein
MPMFSANNLDVKYCSICITLNIMNDNPPSHILGRFY
>gid:864892  SOA0155  conserved domain protein
MKTLTNLALIAFLLTSTSVFATAAPHAHQHDNANPQQQAHTHVCPMHPEV
TGNKGDTCPKCGMDLEPKATEVKTAEGTMHNAHEHH
>gid:864893  SOA0156  hypothetical protein
MLESSRSSFGRLMHHTLGRYFLVIFTLLALVGQSVMSNGHAMVPHTMDMS
AMNHEVPSQMHHATMMQMDTENSSDSHSMANTDCCNDKMLPGAKQHCCDG
TTSCSNDCGHCLTISVAGTLFSPHLWSSVSMSDTAMATPMPHFHSISLSS
AFKPPIA
>gid:864894  SOA0157  hypothetical protein
MKTTLLNKSLLGLTFVIGALLSSATVTAASLKSTDALSVISINGVPAKPF
KPIQLSAGKVLLELKYQEIFDYRADDSGNWVKSEPLYLVLDVKANDSYQI
TQPKIMTEAEARQFIKYPTIQLSINGDKAGEYPLQSHSQLMVKMLVSNPA
F
>gid:864906  SOA0171  hypothetical protein
MKNLLIFSFILLAVAFSITQISPYYHKYSYCKLQSEEQTQPNYGYKLPKE
FENIGKNSDTNNLSDKDLTQLKKERELSFQKCMTK