Gene list
Applied filters:
COG category: Intracellular trafficking and secretion
Gene type: CDS
Gene type: CDS
Genomic element: chromosome
Number of genes found: 48
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Chlamydophila caviae GPIC | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | CCA00205 | polymorphic outer membrane protein B/C family protein/autotransporter, putative | chromosome | CDS | 216409 | 5388 | - | 0.426132 |
NA | CCA00277 | polymorphic outer membrane protein H family protein | chromosome | CDS | 306379 | 2946 | - | 0.421249 |
NA | CCA00972 | MotA/TolQ/ExbB proton channel family protein | chromosome | CDS | 1132565 | 699 | + | 0.402003 |
NA | CCA00127 | protease IV, putative | chromosome | CDS | 132894 | 999 | + | 0.377377 |
NA | CCA00283 | polymorphic outer membrane protein G family protein/autotransporter | chromosome | CDS | 323820 | 2601 | - | 0.425221 |
NA | CCA00280 | polymorphic outer membrane protein G family protein/autotransporter, putative | chromosome | CDS | 315525 | 2532 | - | 0.405608 |
NA | CCA00472 | inner membrane protein, putative | chromosome | CDS | 533148 | 2385 | + | 0.372746 |
NA | CCA00282 | polymorphic outer membrane protein G family protein/autotransporter, putative | chromosome | CDS | 320877 | 2829 | - | 0.425592 |
NA | CCA00272 | polymorphic outer membrane protein E/F family protein/autotransporter, putative | chromosome | CDS | 296044 | 2826 | - | 0.40092 |
NA | CCA00908 | conserved hypothetical protein | chromosome | CDS | 1048582 | 552 | + | 0.38587 |
NA | CCA00909 | virulence factor transport ATPase, putative | chromosome | CDS | 1049130 | 1305 | + | 0.425287 |
NA | CCA00624 | polymorphic outer membrane protein G family protein/autotransporter | chromosome | CDS | 714234 | 2526 | + | 0.425574 |
NA | CCA00943 | conserved hypothetical protein | chromosome | CDS | 1093698 | 543 | - | 0.41989 |
NA | CCA00945 | conserved hypothetical protein | chromosome | CDS | 1094671 | 378 | - | 0.402116 |
NA | CCA00663 | signal peptidase I, putative | chromosome | CDS | 754762 | 1890 | + | 0.392593 |
NA | CCA00806 | polymorphic outer membrane protein D family protein/autotransporter | chromosome | CDS | 926134 | 4614 | - | 0.392284 |
NA | CCA00279 | polymorphic outer membrane protein G family protein | chromosome | CDS | 312634 | 2607 | - | 0.397392 |
NA | CCA00697 | preprotein translocase SecE subunit, putative | chromosome | CDS | 806045 | 246 | - | 0.341463 |
NA | CCA00281 | polymorphic outer membrane protein G family protein/autotransporter, putative | chromosome | CDS | 318210 | 2532 | - | 0.415482 |
NA | CCA00750 | conserved hypothetical protein | chromosome | CDS | 861051 | 609 | + | 0.394089 |
NA | CCA00973 | ExbD/TolR family protein | chromosome | CDS | 1133260 | 408 | + | 0.362745 |
NA | CCA00460 | type III secretion protein, hrpY/hrcU family | chromosome | CDS | 519872 | 1083 | - | 0.379501 |
NA | CCA00284 | polymorphic outer membrane protein G family protein/autotransporter | chromosome | CDS | 326543 | 2781 | - | 0.421431 |
NA | CCA00975 | conserved domain protein | chromosome | CDS | 1134451 | 1284 | + | 0.387072 |
NA | CCA00178 | secDF protein, putative | chromosome | CDS | 186476 | 4215 | + | 0.398814 |
NA | CCA00206 | polymorphic outer membrane protein A family protein/autotransporter, putative | chromosome | CDS | 221997 | 2805 | - | 0.3918 |
NA | CCA00751 | conserved hypothetical protein TIGR00427 | chromosome | CDS | 861672 | 609 | + | 0.376026 |
clpP-1 | CCA00920 | ATP-dependent Clp protease, proteolytic subunit | chromosome | CDS | 1066098 | 612 | + | 0.408497 |
clpP-2 | CCA00225 | ATP-dependent Clp protease, proteolytic subunit | chromosome | CDS | 241676 | 576 | + | 0.411458 |
ffh | CCA00658 | signal recognition particle | chromosome | CDS | 749587 | 1344 | - | 0.412202 |
flhA | CCA00428 | protein export protein, FHIPEP family | chromosome | CDS | 482340 | 1758 | + | 0.390216 |
ftsY | CCA00785 | signal recognition particle-docking protein FtsY | chromosome | CDS | 899757 | 858 | + | 0.413753 |
gspD | CCA00948 | general secretion pathway protein D | chromosome | CDS | 1097741 | 2262 | - | 0.417772 |
gspE | CCA00947 | general secretion pathway protein E | chromosome | CDS | 1096258 | 1494 | - | 0.419679 |
gspF | CCA00946 | general secretion pathway protein F | chromosome | CDS | 1095068 | 1176 | - | 0.427721 |
lspA | CCA00210 | lipoprotein signal peptidase | chromosome | CDS | 227329 | 498 | - | 0.371486 |
sctC | CCA00040 | type III secretion protein SctC | chromosome | CDS | 49349 | 2730 | + | 0.399267 |
sctJ | CCA00935 | type III secretion protein SctJ | chromosome | CDS | 1087271 | 993 | + | 0.418933 |
sctL | CCA00937 | type III secretion translocase sctL | chromosome | CDS | 1089263 | 690 | + | 0.365217 |
sctN | CCA00035 | type III secretion cytoplasmic ATPase SctN | chromosome | CDS | 43995 | 1329 | + | 0.441685 |
sctQ | CCA00038 | type III secretion translocase SctQ | chromosome | CDS | 46714 | 1116 | + | 0.40233 |
sctR | CCA00938 | type III secretion inner membrane protein SctR | chromosome | CDS | 1089967 | 912 | + | 0.405702 |
sctS | CCA00939 | type III secretion inner membrane protein SctS | chromosome | CDS | 1090888 | 285 | + | 0.375439 |
sctT | CCA00940 | type III secretion inner membrane protein SctT | chromosome | CDS | 1091179 | 870 | + | 0.402299 |
sctV | CCA00459 | type III secretion inner membrane protein SctV | chromosome | CDS | 517743 | 2130 | - | 0.412676 |
secA | CCA00925 | preprotein translocase, SecA subunit | chromosome | CDS | 1071456 | 2913 | - | 0.393066 |
secY | CCA00111 | preprotein translocase SecY subunit | chromosome | CDS | 116494 | 1374 | + | 0.400291 |
yajC | CCA00884 | preprotein translocase, YajC subunit | chromosome | CDS | 1014342 | 354 | + | 0.378531 |