Gene list
Applied filters:
COG category: Intracellular trafficking and secretion
Gene type: CDS
Gene type: CDS
Genomic element: chromosome 1
Number of genes found: 28
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# Photobacterium profundum, ss9 >PBPRA0028 Hypothetical flagellar protein MNPMIGKISHSQPMALPPEVTNKTAKPSTSNVAQVELSSELKSLQSAKES MDKTSDVDMNKVAEMKAMLNAGKVSINLDDLAGSMLDFYQDNK >PBPRA0026 Hypothetical protein MNAHQQRLTLLEDLSGQYSVASGSQASALLLKGIGRFRHQLDNLTNLQRQ ELALSQVELRSMNERLVKQHCQVQMGNKIIDKRLTKIQNQRDKQEQKVLD ELSIIRFFHRRS >PBPRA0014 BB2576, Hypothetical flagellar biosynthetic protein FliR MLDISAAQLTAWLGQIWWPFFRLGAAMLMMPVFGGSTIPTQVRVGLAFCI SLLAAPLMPPMPSVDPLSLDALILGVQQMIIGGIMGLMLELLFGVFTTMG QILSMQMGLGMAMSNDPINGVSIPTLGKYYQLYILLLFLALDGHLVALDV VVQSFNVWPVGEMPSQDALYSVVMRLGWLIAAAFLLALPAVCAMLLVNGA FGMMNRAAPQLNVFALGFPMTMLLGLMCLLITTSSIPENFTRLCSETLAM MANLEAVQP >PBPRA0150 BBP399, putative membrane protein MEIMSAAVMLFLIMDPLGNLPVMLSILRHIEPKRRRIIMVRELCFALIIL LLFLFGGKQMLAFLHVSTETVSISGGIILFLIAIKMIFPQPGGVTGLAAG EEPFLVPMAIPMIAGPSVLASLLLLSNQDPSRIWDWVLALLLAWGASFVI LMFHEVFNRLLGEKGLKAVERLMGLLLVMISVQMFLDGIRAYLSIGL >PBPRA0024 CV2997, Hypothetical flagellar assembly protein MNIIHPQSGQYRSYHFPPLVEPEEDLFGDEGGGSYQDEFHNGFQEGQQKG HEQGYQEGLAQGLQAGQQQGIEQGRQQGAREGVEQVRQEIGGTVSSVDGL MQQVQQVFHQHVRLQSEMICDLVQKVARQVIRAELTLKPSQMVHLIEETL AQMPEQKPDLVIYLNPQDCQRLVDLVPEHVATWNLTPDDSLAIGSCRVVT NDSEAFSDSEERLEACMDSVKDNLLTNA >PBPRA0022 CV2999, Hypothetical FliF Flagellar M-ring transmembrane protein MTELMKQRLSNMASPSAMGRLLTGTRLIVLLGLIAALVTTAVVIGLWQGN SQYRPLYGEQEKFDRSQVISVLEQQGMDYYIEPQQGNVMVDRDSVGKARL ALAAAGIEAQLPAGLDILSQDSSLGTSQFIESARYRHGLEGELALSIMAL DAISNVRVHLAIPKKTLFVRREKEQPSASVVLSLSSGRELTTEQVTAIVN LVAGSVPDLNAERVNVIDQKGRLLSSVINREGKHSRNSSSYLEYVQKLEQ SYIKRAARMLRPMVGIDNFQVEVAADINYDRTEATEESYAPDGSVRNEFS TIDRRIGKAAQGVPGALSNRPPEDGEEEDPNAGNERSESSRDYALDRVLK HTLYQQGQVKSLSVSILLNGQPDTFPPEQLANIKQMLADAIGINEVRGDQ FSILVYPFTKAEANLLADEPVWWMQLIWLDYLRYILSAVVALVILLVLVR PAIRQLSGSNKSTALTAPNDKLVAITGESVSENTALNNDTSPEIEAVPAT EKTETTSLSSVVTSENYLELPSPETGLEVQSSYLQMLSEKEPERVAHVVK QWITPKDDDK >PBPRA0278 EBIG1843, hypothetical fimbrial assembly protein PilP MMFPRYLMIMLCLLLVGCRANDDSISMFISNTHSAAKARIDPLPAQFEFI ADEFVMTDSRVPFVRPYPKQMDTAETSNKSCWQPNLQREFMALESYSLDT LTMKGVLGDRKQLWALIYTPEGQLMKIKEGHYLGLNHGQVQRVGSRSIDI DEILPDGAGCWLKRTTHLALSQQ >PBPRA0120 HD0715, conserved hypothetical protein MFDIGFWELILISVVGLVVLGPERLPVAIRSVSRWVGAARNMANSVKDEL SQELKIQELQENLKKAEQMGMKDLSPELRESVEELKQAASDVQRPYAKKS EPTSTTTSQKQE >PBPRA0012 PP4344, Putative flagellar biosynthesis protein MKQKLAPLLTLLAKGQLGIPLVLMIILAMIMLPIPPLVLDMLFTFNIVLS LLVMLVSVYSKRSLDFSVFPSILLIATLLRLALNVASTRVVLLNGQNGGD AAGKVIQAFGDVVIGGNYVVGMVVFVILIIINFVVVTKGGERISEVSARF TLDAMPGKQMAIDADLNAGIIDHLQAKQRREDVAQEADFYGSMDGASKFV RGDAIAGMLILFINIIGGISIGVFEYGLSFSDAFQTYALLTIGDGLVAQI PSLLLATAAAIIVTRVSDSNDLSQQISKQMLASPVVLFVVAGIMLILGLI PGMPHLAFLCFSAIVAFTGWRMTKKEHSTDNDDDLVRAEEIVEQHGQTEN KELIVSDIPLIHAMSLNVGFRLVSLIDRRQGAELLSRLVGIRKTLTEQRG FVIPKIHVKDDLALEASQYQIAVRGATIVQAELEIDRLLAINPGQVYGNV DGILTKDPAYGMEAVWIAAQEKDKAVNLGYTVVDHATIISTHVSKVINDY IEDILSPEEVAGIIERLATLNSKLADDLQQKLTPQQLLRVFRQLTVDGVS LSDIVSIANSIVESAELSKDPILLAADVRCILRRVLLNNLIGMKTEVPAI TLSSELENMLLGALSQAQSGGHVQLDGFALEPTVIEKLQRSLPEVLDNMR INGHTPILLVLPQLRPLLARYSRVCARGLQVLSFNEIPDDRGVAVVGNMG >PBPRA0279 RS01326, putative fimbrial assembly protein MNRILFIPNVLKHLCLFIVCILLLAVPATATVLIDNQVKKIDFKRDKKGQ GVLNVQFAKSQSLVDIRQSGKQLFVDILDTSISDEMIYTLDVADFATAVN SIETFKIEKGTRLILKMNSAFRYDYTLKGAQFNVMITTKKKTETKKEGIA YKGKPISINFQDVPVRNVLQLIAEYNDFNLVVSDTVQGNVTLRLDDVPWP QVLDIILQAKGLDKRVNNSVVLVAPKAELAQNEQKALEAKRKENELASLR SELIQVNYAKAVDLADLLEGTEDGISMLSERGSLHVDDRTNSIIIKDLPS SIESIKDIISALDIPVKQVQIEARIVTINEGDVDELGVRWGVSKHNGNFT LGGSIESNLGAVGLLKDDVSVDDFLNVNLAAQKAGASSIAFQVAKIGDIL LDLELSALQSESKAEIISSPRLVTTNKQTAYIEQGTEIPYLEASSSGAVS VAFKKAVLSLMVTPQITPDNKLVLDLVVTQDEPGKTVVTGIGEAVSINTQ RIGTQVLVENGETIVLGGIYQHQVNKSVTKVPLLGDLPYLGALFRHSLEE MGKRELLIFITPKIVLQ >PBPRA0226 SO0052, putative protein-transport protein SecB MAEVANNEAQQNFQIQRVFLKDISFEAPNSPDMFQKEWNPDVKLDLDTQS RELGEGVYEVILRLTVTVKNAEETAFLCEVQQGGIFTVSGMEAPQLAHCL GAFSPNILFPYARETISSLVVKGTFPQLNLAPVNFDALFMNYLQNQAEAN TESTEKA >PBPRA0016 SO3218, Putative flagellar assembly protein MRLLGILLTLLLFSHPAFAQDLPLLTINGPNGQEEYSVKLQIFLLMTALA FLPAMLLMTTSFTRIIIVLGILRQAMGLQQSPPNRVLVGIALTLSLFIMR PVIYDIHDNAVVPYQKGEMTMFEAAKVAEQPLRQFMLQQTRETDLEQILR IADEPTPDNVDDLDFLLVMPAFILSELKTAFQIGFMLFIPFLIIDMVVAS VLMAMGMMMLSPLIISLPFKLMVFVMVDGWSMTVGTLSASFG >PBPRA0025 SO3225, Putative FliI, flagellum-specific ATP synthase MRDLFQELNARLSLAVEHVPDVPIARTYGRLTRMAGLTLEAVGCRLCTGQ RCMIETDHGTLVEAEVVGFDRNASVLMPIRHTTGLRPGSRVFPLHGDSKI NVGYSMLGRVLNGLGEPLDSRGPITADQRINLQGETINPLQRLPISTQLD VGVRVINSMLSVGKGQRMGLFAGSGVGKSVLLGMMTRNTTAEITVVGLIG ERGREVREFIEHSLGPEGMKNAVVIASPADDPPLMRLRASMLCHRIAEFF RDQGHDVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFSMLPQLVE RAGNGATEKGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLNRELAEQ GHYPAIDIEQSISRAMPQVVTPEQLQKAQQVKQLYARYRQVQDLISLGGY QQGQDQNLDMAVHYYPEICDFLQQGMNERVLLADSQQQLMQLTGGQ >PBPRA0119 SO4202, putative TatA protein MGGISIWQLLIIALIIVLLFGTKKLRSLGGDLGSAVKGFKKAIGDEELTV KKDNTEADADFEQKTLSKEEQQSEDPVQKSQKDKEQV >PBPRA0340 STY4378, putative preprotein translocase, SecY subunit MAKQPGKDFRSAQGGLAELKTRLLFVLGAILIFRAGSFVPIPGIDAAVLA DLFEQQKGTVIELFNMFSGGALERASILALGIMPYISASIIVQLLTVVHP ALAELKKEGESGRRKISQYTRYGTLVLATFQAIGIATGLPSMIPGLVLNP GLGFYFVAVVSLITGTMFLMWLGEQITERGIGNGISVIIFTGIVAGLPPA IGQTVEQARQGELHVLLLLLIAVISFAVIYFVVFMERGQRRIVVNYAKRQ QGRRVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNENLGW LSDISLALSPGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAF VPGIRPGEQTAKYIDKVMTRLTLAGAMYITFICLIPEFMMIAWNVRFYFG GTSLLIVVVVIMDFMAQVQTHMMSQQYESVLKKANLKG >PBPRA0153 T3951, putative cell division protein FtsY MAEKKKRGLFSWLGFGSDEKTEQTEQTIENQTNEVDVDSLQSTDDKENIE ALAQQEADALAQAKADEEAEALAIAKAAEEAEALAVVKAAEEAEMAAKAE AEAQAAKAAEVIIHEQEKPQSDGFFARLMRGLKKTKTNFGSGFFGLFSGK KIDDELFEELEEQLLIAXVGMDXTLXIIENLTDKAXRNELKDGEALYGLL KEELADMLSTVEQPLIVDTTQKPFVILMVGVNGVGKTTTIGKLAKQFQSE GKSVMLAAGDTFRAAAVEQLQVWGERNGVPVVAQHTGADSASVIFDAIES AQARNVDVVIADTAGRLQNKGHLMEELRKIVRVMKKVDPAAPHEIMLTVD AGTGQNAISQAKLFSEVAPVSGITISKLDGTAKGGVIFAIANQFSIPIRY IGIGEGIDDLRPFVADEFIEALFSDEE >PBPRA0275 VC2634, hypothetical fimbrial assembly protein PilM MFRNPLSIGIDIGNHSVKAVALSQKKERLELAAYAEVVLTSPVINEQHSV DSTVLLSAIRKLKKSLPFGSKIVTLALPDSAVISKVIQLDTNLKEDEAVF AVSQALGSSSPFPVEELWVDFFPLESNVFPDASTTMPYQIFATRKETVDT RIVAIKKAGLSPKVMELQTHALLWLVEHSAEMSGIHKQWGVVDVGDCLTE FCIKPQNAAAYHREIAFGLRKYSSSPHRNTLVNDLYEDEPVMKEPLSSDE IERFTQQLADQLKRQFQLYNSTHPRSSLKGIWLCGGGQHVISSELLQRLL GVEVELMNPFAHFNRHKRLDTVSDTALNSQFAVAAGLAIRGVNQ >PBPRA0013 VP2236, Hypothetical FlhB flagellar biosynthetic protein MSENSSQDKTEQPSQQKLRKAREEGNLPRSKELVTALMTLGAALLLSAFS SDLAHMFDEVATLNLALPKKAAFEPEFMLKHLSFSLTSMIFTISPIFGLL LLVTILANIIRGGWNISVTAAQPKLSKLNPLSGIKRMFSTKSLVELVKSI LKVSLIGGTLYWLLSNHLTQIIALQRLPMTEAILQTVDILWQGLFSFGLA LLLIAVLELPYAGWDYTKQLKMTKQEVKEEHKNSEGKPEVKAKIRQLQQQ MSQRQMHKTVPQADVVITNPTHYAIALKYDLDKASAPFVLAKGTDQMALE MRKIARHHNCPIVEIPALTRAVYYSTNEWQEIPAPLYVAVAHILTFVFQM EQYKQGRQPSKPEFPQVSIPKELHR >PBPRA0015 VP2238, putative flagellar biosynthetic protein MNSEFVATFFGDALMIIVSMVCVLIVPSLLVGLVVSIFQAATQINEQTLS FLPRLLMTFAMLGFAGPWLLRTLSDLFTRLFLNIPHLIG >PBPRA0282 VP2743, hypothetical DamX-related protein MTNGSNARELDLDSQIQLLSRIQFLTRFNSNLIQITGTEGAGKTWLAQHY IEHYSQHCNQALLLCHPAQTDSQHRSIVLKQLVNQPLFNDQDPLIQSLER MLEGHRCNVLLIIDDAHLLSPVLIAELWAVITRAQSEPLWQINVLLFSQT GRLNKYLDQVSHGQGQMPLELEISDLTEQEVQTFIEVVLSSDALDANGRR ELKEKAALAEPKPRALMQLNNTDNNMANSSSRTLSPLALLVVVLAILTAG VVFWFFPANDEPAPSANNTIVTDTAKENLKTGHYDDGDTEQSATIAAQQA KKLALSSSDRAIDDARVLPQEISSEGLTVGRNDDSQRIVVPSQVVDAMLS EQALETTQSNTDVNTTDVNTNDVATASNDSVRSQHQTAAPALPTQQETSV PVVNVLGEELKGVNSRHYALQLAALQSLSTAKKFVAEHKIQNIATLYETR RKGEAWFIVITGDYKDIVTARRAELLLPDSVQAVQPWVKSYAQIHREIEQ AR >PBPRA0233 VP2857, Hypothetical periplasmic protein CpxP MTSFKKALVIAIALPMALGSASALAFGGGNHHGGKGSCGMQDGRKVFSQL DLTDAQKEQMKSMREMNRDEMKSKRLEKHAEMKANHDKMQELVLASDFDE NAVRDLAQQMSTAQVERRVAMLEKRHEVLNILTPEQKTQYQTLQAERAEK CQARMADRQK >PBPRA0003 VV0003, Putative inner membrane protein, 60 kDa MDSQRNILLIALLFVSFLLYQQWNMDNSPQPQGQGTEQQVNNSGDVPSHS GDGQPIPDQETTSKDLITINTDVLALSVDTLGGDVIEAKLLAYNNELDSA DSFILLKDEPGLSYIAQSGLIGANGIDSANGRAQLAVTAKDFTLADGQDE LRVPMTYVKDGITYTKTFVLKRNSYAVDVEYTIDNQSASAASVQMYAQLR QNLMDDGGSLTMPTYRGGAYSTDTTNYKKYSFDDMQDKSLNMTTTNGWAA MLQHYFVSAWIPRSEEASNLYTRASNGLGYIGVRLPTTTIAAGTEQTLTA TLWVGPKLQKEMEATAANLNLTVDYGWLWFIASPLHKLLSFIQSIVGNWG LAIMMLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERLGDDRQRMS QEMMELYKKEKVNPLGGCLPIVLQMPIFIALYWSLMESVELRHSPFFGWI HDLSAQDPYYILPLLMGVSMFMIQKMSPTTVTDPMQQKIMTFMPVMFTFF FLFFPSGLVLYWLVSNVVTLLQQTLIYRSLEKKGLHTK >PBPRA0277 VV11379, hypothetical fimbrial assembly protein PilO MNDWQDLDFDEITEWPLGPQSVVALLLSLVVVAVGYWYWLTPLQGELTQL KQTEVELRSRVINRASQVAALPTVKQQIDELNQRYQTVIVQLPVEKELAS LLSGINDIGVNNGLEFQGIQWADRIEKAQYYELPLNMQLTGNYEQIGKFA ASIAHLPRIVTLKDVDLKVTEHVQNKNTLSLKVSASTYRFKVTPEKVNL >PBPRA0276 XCC3231, hypothetical fimbrial assembly protein PilN MIAKLNLLPWREEKRLQHKRRFMGLLGAAVFVAAAGHWLTAEFIGYQKEL QQVRNDQLQLEVDTLERQLSFLPELEKQREALNSRLRIIEDIQSERNRVT HLFSMLPALVPQGVYLDNISLKEGNVLLNGVGDSNGRLASLLSNAERSEW LKDVAMHSIEATKGINSEDLTSFKASFSMKTPAMVASTYDAGYELVKKID GSSCNKDNTLIVCKEVHSE >PBPRA0021 Y3465, Hypothetical FliE-like hook basal body protein MQDNVMSMNLPLSQMSEIQAQMKTLEPIQIAPNPMTVNQANSVNFTDVIS QTLNNVDLQGKEASALMTAVDTGKSDDLVGAMVASQKASLSFSALVQVRN KLLTAYDDVMKMPV >PBPRA0017 Y3468, putative flagellar motor switch protein MSEKNNDLSLDLDDLDLGTLGQVQAPEATSSQDMNFIRNIPVNLTLEVAS TELMVGDLMNIGLGTVIELDKISGEAMDVKVNGTLLGHAEVVIVNNKYGL RLVSVVDDNDMLKGLTK >PBPRA0043 YPO0741, Hypothetical LafC MMNQEGLGAYQHSQNHAQAAAASPHRLIQMLLEGLLDNLSRARGFMERGQ VADKGMMISKCLDILNGLSSVLDEEKGGDVTVELFRLYDYCGRRLFEANI NDELEGIDEVTRLITDILEGWVVLKPNRVQVGNES >PBPRA0121 YPO3776, conserved hypothetical protein MSTVEETQPLFSHLVELRNRLLRSILSVLVVFLGLVWFANDIYAFMAAPL VERLPEGATMIATDVASPFFTPIKLTLVTSVFVAVPMILYQVWGFVAPGL YKHERKLIMPLLFSSSLLFYGGVSFAYFVVFPLVFSFFTGIAPEGVQVAT DIASYLDFVLALFMAFGIAFEIPVAIILLCWTGATDPQSLKTKRPYIVVG AFVVGMMLTPPDIISQTLLAIPMCILFEVGLFFSRFYVRDQEEDDDIEQS EEQ