Gene list
Applied filters:
COG category: General function prediction only
Gene type: CDS
Gene type: CDS
Genomic element: chromosome
Number of genes found: 190
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Rickettsia felis URRWXCal2, URRWXCal2; California 2 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | RF_0525 | unknown | chromosome | CDS | 559127 | 903 | + | 0.300111 |
NA | RF_0354 | Acetyltransferase | chromosome | CDS | 372019 | 429 | + | 0.307692 |
NA | RF_0428 | Acetyltransferase | chromosome | CDS | 455163 | 876 | + | 0.319635 |
NA | RF_0939 | Ankyrin repeat | chromosome | CDS | 996184 | 681 | - | 0.337739 |
NA | RF_0394 | Major facilitator family transporter | chromosome | CDS | 417071 | 138 | - | 0.318841 |
NA | RF_0271 | Toxin of toxin-antitoxin system | chromosome | CDS | 300217 | 426 | - | 0.29108 |
NA | RF_0397 | MFS type sugar transporter | chromosome | CDS | 419509 | 831 | - | 0.305656 |
NA | RF_1227 | Predicted ATPase | chromosome | CDS | 1292823 | 603 | - | 0.303483 |
NA | RF_0742 | Predicted esterase of the alpha-beta hydrolase superfamily | chromosome | CDS | 804456 | 369 | + | 0.355014 |
NA | RF_0777 | Predicted metal-dependent hydrolases | chromosome | CDS | 833495 | 708 | + | 0.314972 |
NA | RF_0444 | TPR repeats | chromosome | CDS | 472670 | 1050 | - | 0.268571 |
NA | RF_1132 | unknown | chromosome | CDS | 1200334 | 483 | + | 0.289855 |
NA | RF_0745 | unknown | chromosome | CDS | 807019 | 576 | + | 0.282986 |
NA | RF_0970 | Na+/proline symporter, signal transduction histidine kinase | chromosome | CDS | 1026387 | 2955 | + | 0.265313 |
NA | RF_0612 | unknown | chromosome | CDS | 654699 | 615 | - | 0.292683 |
NA | RF_1281 | Conserved hypothetical protein | chromosome | CDS | 1361673 | 837 | - | 0.295102 |
NA | RF_0329 | Nucleotidyltransferase domain | chromosome | CDS | 348404 | 705 | - | 0.28227 |
NA | RF_1183 | (Di)nucleoside polyphosphate hydrolase | chromosome | CDS | 1252388 | 564 | - | 0.292553 |
NA | RF_1164 | Predicted sulfurtransferase | chromosome | CDS | 1236685 | 540 | - | 0.35 |
NA | RF_0828 | unknown | chromosome | CDS | 874464 | 720 | + | 0.347222 |
NA | RF_0787 | Toxin of toxin-antitoxin system ParE | chromosome | CDS | 842150 | 285 | - | 0.34386 |
NA | RF_0957 | Probable antitoxin of toxin-antitoxin system | chromosome | CDS | 1015369 | 231 | - | 0.268398 |
NA | RF_0398 | MFS type sugar transporter | chromosome | CDS | 420329 | 204 | - | 0.441176 |
NA | RF_0954 | Proline/betaine transporter | chromosome | CDS | 1013130 | 843 | - | 0.31554 |
NA | RF_0982 | unknown | chromosome | CDS | 1041511 | 804 | - | 0.28607 |
NA | RF_0507 | unknown | chromosome | CDS | 541448 | 852 | - | 0.284038 |
NA | RF_0570 | Phage uncharacterized protein | chromosome | CDS | 605932 | 1260 | + | 0.337302 |
NA | RF_0583 | Predicted permease | chromosome | CDS | 620962 | 933 | + | 0.316184 |
NA | RF_1189 | Serine esterase | chromosome | CDS | 1257757 | 648 | - | 0.373457 |
NA | RF_0193 | unknown | chromosome | CDS | 210363 | 411 | + | 0.29927 |
NA | RF_0488 | Predicted metal-dependent hydrolase | chromosome | CDS | 521855 | 690 | + | 0.305797 |
NA | RF_0783 | Ankyrin repeat | chromosome | CDS | 838093 | 648 | - | 0.29321 |
NA | RF_0063 | Ankyrin repeat | chromosome | CDS | 65057 | 705 | + | 0.307801 |
NA | RF_1202 | unknown | chromosome | CDS | 1267691 | 411 | + | 0.316302 |
NA | RF_0155 | unknown | chromosome | CDS | 172226 | 387 | + | 0.284238 |
NA | RF_1102 | Transposase | chromosome | CDS | 1171015 | 459 | - | 0.267974 |
NA | RF_0085 | Hypothetical GTP-binding protein | chromosome | CDS | 89980 | 639 | + | 0.320814 |
NA | RF_0683 | unknown | chromosome | CDS | 729716 | 585 | + | 0.316239 |
NA | RF_0987 | Ankyrin repeat | chromosome | CDS | 1046173 | 1701 | + | 0.372134 |
NA | RF_0579 | ABC transporter permease protein | chromosome | CDS | 616306 | 834 | + | 0.351319 |
NA | RF_0955 | Proline/betaine transporter | chromosome | CDS | 1013976 | 465 | - | 0.376344 |
NA | RF_0422 | unknown | chromosome | CDS | 446652 | 1239 | - | 0.283293 |
NA | RF_1219 | Multidrug resistance transporter protein | chromosome | CDS | 1283945 | 336 | - | 0.28869 |
NA | RF_0534 | unknown | chromosome | CDS | 570104 | 1569 | - | 0.288082 |
NA | RF_0922 | Ankyrin repeat | chromosome | CDS | 983033 | 540 | + | 0.35 |
NA | RF_1070 | unknown | chromosome | CDS | 1137036 | 1884 | + | 0.282909 |
NA | RF_0452 | MFS type sugar transporter | chromosome | CDS | 481300 | 723 | - | 0.3361 |
NA | RF_0546 | Predicted hydrolases or acyltransferases | chromosome | CDS | 582698 | 759 | - | 0.285903 |
NA | RF_0820 | Predicted hydrolases or acyltransferases | chromosome | CDS | 868646 | 627 | - | 0.293461 |
NA | RF_0034 | unknown | chromosome | CDS | 35094 | 1605 | - | 0.323988 |
NA | RF_0499 | ABC transporter ATP-binding protein | chromosome | CDS | 532984 | 732 | + | 0.297814 |
NA | RF_0784 | Predicted acetyltransferase | chromosome | CDS | 838757 | 759 | - | 0.316206 |
NA | RF_1277 | Predicted ATPase | chromosome | CDS | 1357514 | 1260 | - | 0.312698 |
NA | RF_1254 | unknown | chromosome | CDS | 1330230 | 1530 | + | 0.332026 |
NA | RF_1203 | unknown | chromosome | CDS | 1268101 | 513 | + | 0.306043 |
NA | RF_0960 | Sco2 protein precursor | chromosome | CDS | 1018003 | 618 | + | 0.305825 |
NA | RF_0521 | Conserved hypothetical protein | chromosome | CDS | 555904 | 1020 | + | 0.306863 |
NA | RF_0075 | unknown | chromosome | CDS | 81916 | 1005 | + | 0.247761 |
NA | RF_0732 | Toxin of toxin-antitoxin system | chromosome | CDS | 793180 | 405 | + | 0.377778 |
NA | RF_0206 | unknown | chromosome | CDS | 225597 | 2235 | + | 0.285459 |
NA | RF_0020 | ComEC/Rec2-related protein | chromosome | CDS | 18494 | 1215 | - | 0.315226 |
NA | RF_0626 | Predicted glutamine amidotransferases | chromosome | CDS | 669573 | 879 | - | 0.360637 |
NA | RF_0749 | Phage prohead protease (HK97 family) and phage major capsid protein (HK97 family) | chromosome | CDS | 809940 | 1110 | + | 0.344144 |
NA | RF_1081 | Ankyrin repeat | chromosome | CDS | 1147207 | 645 | - | 0.31938 |
NA | RF_1389 | Oxidoreductase | chromosome | CDS | 1474238 | 393 | + | 0.333333 |
NA | RF_1099 | Ankyrin repeat | chromosome | CDS | 1168895 | 804 | - | 0.309702 |
NA | RF_1218 | unknown | chromosome | CDS | 1283490 | 330 | - | 0.369697 |
NA | RF_1217 | unknown | chromosome | CDS | 1282820 | 705 | - | 0.346099 |
NA | RF_0536 | Plasmid maintenance system antidote protein | chromosome | CDS | 572451 | 162 | + | 0.333333 |
NA | RF_0129 | unknown | chromosome | CDS | 146328 | 579 | - | 0.331606 |
NA | RF_0679 | Predicted permease | chromosome | CDS | 725627 | 930 | + | 0.305376 |
NA | RF_1087 | Ankyrin repeat | chromosome | CDS | 1154205 | 375 | + | 0.290667 |
NA | RF_0950 | Ankyrin repeat | chromosome | CDS | 1009261 | 1188 | - | 0.33165 |
NA | RF_0127 | Tellurite resistance protein-related protein | chromosome | CDS | 144931 | 633 | - | 0.295419 |
NA | RF_1194 | Conserved hypothetical protein | chromosome | CDS | 1261415 | 840 | - | 0.307143 |
NA | RF_0226 | Predicted ATPase | chromosome | CDS | 251243 | 1206 | + | 0.310116 |
NA | RF_0591 | Ankyrin repeat | chromosome | CDS | 634352 | 726 | + | 0.305785 |
NA | RF_1088 | unknown | chromosome | CDS | 1155128 | 756 | + | 0.351852 |
NA | RF_0814 | Na+/proline symporter and signal transduction histidine kinase | chromosome | CDS | 862557 | 1725 | + | 0.30029 |
NA | RF_1233 | Predicted permeases | chromosome | CDS | 1297841 | 1089 | - | 0.227732 |
NA | RF_1134 | Integral membrane protein | chromosome | CDS | 1201607 | 711 | + | 0.337553 |
NA | RF_0680 | Predicted hydrolases or acyltransferases | chromosome | CDS | 726615 | 873 | + | 0.273769 |
NA | RF_0764 | Putative methyltransferase | chromosome | CDS | 820495 | 1317 | + | 0.301443 |
NA | RF_0372 | Tryptophan repressor binding protein | chromosome | CDS | 394865 | 591 | - | 0.384095 |
NA | RF_1186 | Conserved hypothetical protein | chromosome | CDS | 1254367 | 504 | - | 0.257937 |
NA | RF_0309 | MFS type sugar transporter | chromosome | CDS | 323763 | 1278 | + | 0.283255 |
NA | RF_0754 | unknown | chromosome | CDS | 812652 | 285 | + | 0.25614 |
NA | RF_0578 | unknown | chromosome | CDS | 615504 | 798 | + | 0.33208 |
NA | RF_0887 | Large extracellular alpha-helical protein | chromosome | CDS | 944569 | 5679 | + | 0.322768 |
NA | RF_0011 | Ankyrin repeat | chromosome | CDS | 11601 | 978 | - | 0.299591 |
NA | RF_0980 | Acetyltransferase | chromosome | CDS | 1038698 | 420 | - | 0.261905 |
NA | RF_1175 | TPR repeats | chromosome | CDS | 1246110 | 447 | - | 0.277405 |
NA | RF_0676 | Conserved hypothetical protein | chromosome | CDS | 722071 | 1683 | + | 0.3571 |
NA | RF_0500 | ABC transporter ATP-binding protein | chromosome | CDS | 533782 | 825 | + | 0.311515 |
NA | RF_0399 | MFS type sugar transporter | chromosome | CDS | 420584 | 240 | - | 0.320833 |
NA | RF_0451 | MFS type sugar transporter | chromosome | CDS | 480716 | 432 | - | 0.270833 |
NA | RF_0585 | unknown | chromosome | CDS | 624596 | 1950 | + | 0.302564 |
NA | RF_0247 | Predicted ATPase | chromosome | CDS | 275336 | 1143 | + | 0.329834 |
NA | RF_1228 | Predicted ATPase | chromosome | CDS | 1293674 | 303 | - | 0.280528 |
NA | RF_0026 | TPR repeats | chromosome | CDS | 28998 | 1650 | + | 0.287879 |
NA | RF_0580 | Ankyrin repeat | chromosome | CDS | 617306 | 918 | - | 0.287582 |
NA | RF_0412 | unknown | chromosome | CDS | 433091 | 537 | - | 0.32216 |
NA | RF_0743 | Predicted esterase of the alpha-beta hydrolase superfamily | chromosome | CDS | 804933 | 1113 | + | 0.314465 |
NA | RF_0924 | Lysozyme | chromosome | CDS | 984883 | 207 | - | 0.405797 |
NA | RF_0750 | Phage prohead protease (HK97 family) and phage major capsid protein (HK97 family) | chromosome | CDS | 811007 | 411 | + | 0.355231 |
NA | RF_1394 | TPR | chromosome | CDS | 1477380 | 822 | - | 0.261557 |
NA | RF_1366 | Conserved hypothetical protein | chromosome | CDS | 1456452 | 696 | - | 0.313218 |
NA | RF_0923 | Ankyrin repeat | chromosome | CDS | 983717 | 936 | - | 0.287393 |
NA | RF_0248 | Conserved GTP-binding protein | chromosome | CDS | 276622 | 1344 | - | 0.338542 |
NA | RF_1322 | Conserved hypothetical protein | chromosome | CDS | 1407055 | 465 | + | 0.344086 |
NA | RF_0266 | Ankyrin repeat | chromosome | CDS | 294891 | 1221 | - | 0.287469 |
NA | RF_0857 | unknown | chromosome | CDS | 909006 | 1032 | + | 0.29845 |
NA | RF_0542 | unknown | chromosome | CDS | 577562 | 669 | + | 0.273543 |
NA | RF_0782 | Ankyrin repeat | chromosome | CDS | 837539 | 546 | - | 0.291209 |
NA | RF_0194 | unknown | chromosome | CDS | 211237 | 771 | + | 0.309987 |
NA | RF_0326 | unknown | chromosome | CDS | 346352 | 255 | + | 0.345098 |
NA | RF_1390 | Oxidoreductase | chromosome | CDS | 1474721 | 306 | + | 0.398693 |
NA | RF_0356 | unknown | chromosome | CDS | 373713 | 255 | + | 0.309804 |
NA | RF_0421 | unknown | chromosome | CDS | 445577 | 528 | - | 0.270833 |
NA | RF_0310 | Tetratricopeptide repeat domain containing protein | chromosome | CDS | 325405 | 2121 | - | 0.283357 |
NA | RF_0021 | ComEC/Rec2-related protein | chromosome | CDS | 19611 | 903 | - | 0.332226 |
NA | RF_0899 | Probable antitoxin of toxin-antitoxin system | chromosome | CDS | 962370 | 276 | - | 0.315217 |
NA | RF_0439 | MFS type sugar transporter | chromosome | CDS | 466054 | 1308 | - | 0.312691 |
NA | RF_0009 | Predicted esterase of the alpha-beta hydrolase superfamily | chromosome | CDS | 9700 | 741 | + | 0.334683 |
NA | RF_0314 | Ankyrin repeat | chromosome | CDS | 329513 | 684 | - | 0.261696 |
NA | RF_1374 | Predicted permeases | chromosome | CDS | 1461843 | 1110 | + | 0.276577 |
NA | RF_0043 | Sco2 protein precursor | chromosome | CDS | 45059 | 597 | + | 0.271357 |
NA | RF_0017 | Conserved hypothetical protein | chromosome | CDS | 15840 | 516 | - | 0.294574 |
NA | RF_1306 | Ankyrin repeat | chromosome | CDS | 1392427 | 1143 | - | 0.321085 |
NA | RF_0260 | TPR repeats | chromosome | CDS | 289490 | 642 | - | 0.252336 |
NA | RF_0558 | unknown | chromosome | CDS | 598139 | 348 | + | 0.33046 |
NA | RF_1327 | MFS type sugar transporter | chromosome | CDS | 1412842 | 924 | + | 0.325758 |
NA | RF_0969 | Acetyltransferase | chromosome | CDS | 1025565 | 705 | + | 0.262411 |
NA | RF_0933 | Phage-related lysozyme | chromosome | CDS | 992495 | 201 | - | 0.412935 |
NA | RF_0441 | MFS type sugar transporter | chromosome | CDS | 468284 | 1308 | - | 0.308868 |
abcT1 | RF_0115 | ABC transporter ATP-binding protein | chromosome | CDS | 131776 | 1668 | - | 0.302158 |
abcT2 | RF_0717 | ABC transporter ATP-binding protein | chromosome | CDS | 776284 | 732 | - | 0.336066 |
ampG1 | RF_0834 | AmpG-related permease | chromosome | CDS | 879252 | 1326 | - | 0.301659 |
ampG2 | RF_0265 | AmpG protein | chromosome | CDS | 293766 | 960 | + | 0.304167 |
ampG3 | RF_1247 | AmpG protein | chromosome | CDS | 1318488 | 1266 | + | 0.318325 |
ampG4 | RF_0608 | AmpG protein | chromosome | CDS | 651320 | 1245 | + | 0.333333 |
aprD | RF_0511 | Alkaline protease secretion ATP-binding protein AprD | chromosome | CDS | 546302 | 1755 | - | 0.357835 |
bcr1 | RF_0358 | Bicyclomycin resistance protein | chromosome | CDS | 374871 | 1218 | + | 0.333333 |
bcr2 | RF_0212 | Bicyclomycin resistance protein | chromosome | CDS | 235334 | 1176 | - | 0.317177 |
bioC | RF_0806 | Biotin synthesis protein BioC | chromosome | CDS | 854175 | 831 | + | 0.315283 |
bioY1 | RF_0526 | BioY family protein | chromosome | CDS | 560157 | 585 | + | 0.309402 |
bioY2 | RF_0739 | BioY family protein | chromosome | CDS | 801614 | 573 | + | 0.335079 |
chaB | RF_1086 | Cation transport regulator ChaB | chromosome | CDS | 1153603 | 216 | + | 0.347222 |
comF | RF_0891 | Competence protein F | chromosome | CDS | 954211 | 357 | - | 0.316527 |
cvpA | RF_0045 | Uncharacterized protein | chromosome | CDS | 46470 | 669 | + | 0.26009 |
ecoT | RF_0268 | Ecotin precursor | chromosome | CDS | 297194 | 489 | - | 0.321063 |
emrB | RF_1124 | Multidrug resistance protein B | chromosome | CDS | 1192534 | 1560 | + | 0.341026 |
era | RF_1174 | GTP-binding protein Era | chromosome | CDS | 1245203 | 882 | - | 0.335601 |
exsB | RF_0217 | Trans-regulatory protein ExsB | chromosome | CDS | 240358 | 675 | + | 0.36 |
fabG | RF_1222 | 3-oxoacyl reductase | chromosome | CDS | 1286922 | 726 | + | 0.352617 |
gcvT | RF_0811 | Glycine cleavage T-protein | chromosome | CDS | 859517 | 849 | + | 0.319199 |
imp | RF_1066 | TRAP-type uncharacterized transport system | chromosome | CDS | 1127601 | 975 | + | 0.284103 |
kpsF | RF_0720 | KpsF protein | chromosome | CDS | 778184 | 960 | - | 0.322917 |
lysE | RF_0832 | Lysine efflux permease | chromosome | CDS | 878027 | 642 | - | 0.283489 |
mpp | RF_0338 | Mpp | chromosome | CDS | 357382 | 1239 | + | 0.338176 |
mviN | RF_0963 | Integral membrane protein MviN | chromosome | CDS | 1019942 | 1671 | + | 0.322561 |
n2B | RF_0328 | Putative ATPase n2B | chromosome | CDS | 347355 | 1053 | - | 0.279202 |
nudH | RF_1051 | (Di)nucleoside polyphosphate hydrolase | chromosome | CDS | 1110575 | 486 | + | 0.353909 |
obg | RF_1337 | GTP-binding protein | chromosome | CDS | 1423188 | 993 | - | 0.375629 |
paaY | RF_0698 | Carbonic anhydrases/Acetyltransferase, isoleucine patch superfamily | chromosome | CDS | 755687 | 510 | + | 0.315686 |
panF | RF_0906 | Sodium/pantothenate symporter | chromosome | CDS | 970343 | 1437 | + | 0.331942 |
pat1 | RF_0360 | Patatin-like phospholipase | chromosome | CDS | 377964 | 1650 | - | 0.345455 |
perM | RF_0401 | Permease PerM homolog | chromosome | CDS | 421791 | 1056 | - | 0.267045 |
phbB | RF_0153 | Acetoacetyl-CoA reductase | chromosome | CDS | 169948 | 726 | + | 0.373278 |
pheT | RF_0648 | Phenylalanyl-tRNA synthetase beta chain | chromosome | CDS | 694419 | 2457 | + | 0.341066 |
phnP | RF_1371 | Metal-dependent hydrolases of the beta-lactamase superfamily I | chromosome | CDS | 1459805 | 765 | - | 0.317647 |
pkcI | RF_0513 | Protein kinase C inhibitor 1 | chromosome | CDS | 549080 | 360 | - | 0.288889 |
proP | RF_0391 | Permeases of the major facilitator superfamily | chromosome | CDS | 414568 | 1194 | - | 0.291457 |
proP1 | RF_0062 | Proline/betaine transporter | chromosome | CDS | 63358 | 1257 | + | 0.322991 |
proP10 | RF_0186 | Proline/betaine transporter | chromosome | CDS | 203457 | 1311 | + | 0.314264 |
proP2 | RF_0509 | Proline/betaine transporter | chromosome | CDS | 543109 | 1317 | - | 0.307517 |
proP3 | RF_0586 | Proline/betaine transporter | chromosome | CDS | 626797 | 1221 | + | 0.305487 |
proP4 | RF_0233 | Proline/betaine transporter | chromosome | CDS | 259201 | 1395 | - | 0.360573 |
proP5 | RF_1208 | Proline/betaine transporter | chromosome | CDS | 1270770 | 1272 | - | 0.333333 |
proP6 | RF_1349 | Proline/betaine transporter | chromosome | CDS | 1435538 | 1248 | - | 0.367788 |
proP7 | RF_1395 | Proline/betaine transporter | chromosome | CDS | 1478340 | 1272 | + | 0.352987 |
proP8 | RF_0885 | Proline/betaine transporter | chromosome | CDS | 942233 | 1356 | - | 0.311209 |
sam | RF_0061 | S-adenosylmethionine transporter | chromosome | CDS | 62487 | 885 | + | 0.333333 |
tlyC | RF_1185 | Hemolysin C | chromosome | CDS | 1253451 | 900 | - | 0.314444 |
traX | RF_0964 | F pilin acetylation protein TraX | chromosome | CDS | 1021593 | 744 | + | 0.266129 |
trmE | RF_1214 | tRNA modification GTPase TrmE | chromosome | CDS | 1278102 | 1443 | + | 0.340956 |
ubiB | RF_0244 | 2-polyprenylphenol 6-hydroxylase | chromosome | CDS | 271059 | 1437 | + | 0.365344 |
uup | RF_1225 | ABC transporter ATP-binding protein Uup | chromosome | CDS | 1289523 | 1842 | + | 0.312161 |
vapC1 | RF_0456 | Toxin of toxin-antitoxin system VapC | chromosome | CDS | 487123 | 405 | - | 0.293827 |
vapC2 | RF_0095 | Toxin of toxin-antitoxin system | chromosome | CDS | 109736 | 405 | + | 0.25679 |