Gene list
Applied filters:
COG category: Secondary metabolites biosynthesis, transport and catabolism
Gene type: CDS
Gene type: CDS
Genomic element: chromosome
Number of genes found: 169
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Bordetella parapertussis 12822, 12822 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | BPP3002 | putative oxidoreductase | chromosome | CDS | 3227989 | 771 | - | 0.687419 |
NA | BPP1604 | probable short-chain dehydrogenase | chromosome | CDS | 1711140 | 909 | - | 0.730473 |
NA | BPP1420 | putative oxidoreductase | chromosome | CDS | 1519345 | 789 | + | 0.735108 |
NA | BPP3099 | putative oxidoreductase | chromosome | CDS | 3340395 | 870 | - | 0.712644 |
NA | BPP2783 | carboxymethylenebutenolidase | chromosome | CDS | 2982164 | 690 | + | 0.724638 |
NA | BPP3739 | putative oxidoreductase | chromosome | CDS | 4041431 | 780 | - | 0.682051 |
NA | BPP3885 | putative exported solute binding protein | chromosome | CDS | 4204641 | 1098 | - | 0.651184 |
NA | BPP0601 | AMP-binding enzyme | chromosome | CDS | 634989 | 1509 | + | 0.709742 |
NA | BPP0455 | putative substrate-CoA ligase | chromosome | CDS | 485298 | 1575 | + | 0.673016 |
NA | BPP3600 | putative oxidoreductase | chromosome | CDS | 3892885 | 711 | - | 0.721519 |
NA | BPP1950 | putative membrane protein | chromosome | CDS | 2088578 | 1668 | + | 0.644484 |
NA | BPP0607 | putative short chain dehydrogenase | chromosome | CDS | 644173 | 750 | + | 0.661333 |
NA | BPP0845 | putative transport protein | chromosome | CDS | 916058 | 1218 | - | 0.736453 |
NA | BPP3640 | putative oxidoreductase | chromosome | CDS | 3935633 | 801 | + | 0.745318 |
NA | BPP3417 | probable short-chain dehydrogenase | chromosome | CDS | 3687922 | 825 | + | 0.69697 |
NA | BPP2763 | Conserved hypothetical protein | chromosome | CDS | 2963075 | 456 | - | 0.679825 |
NA | BPP0542 | putative ligase | chromosome | CDS | 574603 | 1701 | - | 0.678424 |
NA | BPP0284 | putative membrane protein | chromosome | CDS | 295112 | 630 | + | 0.631746 |
NA | BPP0285 | putative membrane protein | chromosome | CDS | 295744 | 1659 | + | 0.653406 |
NA | BPP2186 | Putative decarboxylase | chromosome | CDS | 2337614 | 810 | + | 0.696296 |
NA | BPP0110 | Putative methyltransferase | chromosome | CDS | 115017 | 846 | - | 0.693853 |
NA | BPP3943 | probable short chain dehydrogenase | chromosome | CDS | 4266524 | 792 | - | 0.737374 |
NA | BPP3042 | probable ATP-binding ABC transporter protein | chromosome | CDS | 3281856 | 672 | - | 0.693452 |
NA | BPP2121 | Putative hydrolase | chromosome | CDS | 2268827 | 915 | - | 0.669945 |
NA | BPP1015 | 2-hydroxychromene-2-carboxylate isomerase | chromosome | CDS | 1092103 | 621 | - | 0.703704 |
NA | BPP0273 | probable ring hydroxylating beta subunit | chromosome | CDS | 283025 | 516 | - | 0.643411 |
NA | BPP2546 | putative short chain dehydrogenase | chromosome | CDS | 2740353 | 774 | - | 0.686047 |
NA | BPP1688 | putative inner membrane transport permease | chromosome | CDS | 1796824 | 2532 | + | 0.731833 |
NA | BPP0199 | putative aminohydrolase | chromosome | CDS | 211309 | 1020 | - | 0.678431 |
NA | BPP3069 | putative exported protein | chromosome | CDS | 3308004 | 1125 | + | 0.628444 |
NA | BPP4261 | putative exported protein | chromosome | CDS | 4602364 | 624 | + | 0.652244 |
NA | BPP2784 | Putative dehydrogenase | chromosome | CDS | 2982865 | 780 | + | 0.737179 |
NA | BPP2559 | probable short-chain dehydrogenase | chromosome | CDS | 2753684 | 759 | - | 0.679842 |
NA | BPP2192 | Putative dioxygenase | chromosome | CDS | 2342977 | 1119 | + | 0.661305 |
NA | BPP0910 | putative long-chain-fatty-acid-CoA ligase | chromosome | CDS | 982602 | 1620 | - | 0.701852 |
NA | BPP1392 | probable short-chain dehydrogenase | chromosome | CDS | 1494036 | 741 | + | 0.684211 |
NA | BPP2193 | Putative dioxygenase (small subunit) | chromosome | CDS | 2344103 | 519 | + | 0.641618 |
NA | BPP3892 | putative hydrolase | chromosome | CDS | 4211658 | 693 | + | 0.701299 |
NA | BPP0277 | putative exported protein | chromosome | CDS | 286926 | 1104 | + | 0.63587 |
NA | BPP3149 | putative CoA ligase | chromosome | CDS | 3387622 | 1464 | + | 0.666667 |
NA | BPP3070 | putative membrane protein | chromosome | CDS | 3309255 | 624 | + | 0.620192 |
NA | BPP0964 | conserved hypothetical protein | chromosome | CDS | 1034288 | 435 | - | 0.68046 |
NA | BPP0370 | putative short chain dehydrogenase | chromosome | CDS | 389466 | 783 | + | 0.697318 |
NA | BPP0577 | putative ligase | chromosome | CDS | 609975 | 1686 | - | 0.68624 |
NA | BPP3583 | conserved hypothetical protein | chromosome | CDS | 3870786 | 540 | - | 0.67037 |
NA | BPP2046 | probable short chain dehydrogenase | chromosome | CDS | 2185406 | 756 | - | 0.72619 |
NA | BPP4410 | putative taurine catabolism dioxygenase | chromosome | CDS | 4753501 | 924 | - | 0.661255 |
NA | BPP1322 | putative sigma-54-dependent transcriptional regulator | chromosome | CDS | 1425368 | 1869 | - | 0.741573 |
NA | BPP0831 | putative taurine dioxygenase | chromosome | CDS | 898165 | 783 | - | 0.65645 |
NA | BPP0699 | extracellular solute-binding protein | chromosome | CDS | 735999 | 1125 | + | 0.690667 |
NA | BPP1089 | putative oxidoreductase | chromosome | CDS | 1162064 | 705 | - | 0.695035 |
NA | BPP0340 | putative acetyl-CoA synthetase | chromosome | CDS | 359632 | 1551 | - | 0.710509 |
NA | BPP4082 | conserved hypothetical protein | chromosome | CDS | 4415766 | 615 | - | 0.671545 |
NA | BPP1128 | probable hydrolase | chromosome | CDS | 1203338 | 720 | + | 0.643056 |
NA | BPP3872 | hypothetical protein | chromosome | CDS | 4192562 | 564 | + | 0.675532 |
NA | BPP2200 | Putative oxidoreductase | chromosome | CDS | 2350513 | 744 | + | 0.733871 |
NA | BPP3602 | putative fatty acid CoA ligase | chromosome | CDS | 3894692 | 1632 | + | 0.728554 |
NA | BPP1651 | putative exported protein | chromosome | CDS | 1762215 | 1092 | + | 0.684982 |
NA | BPP3258 | probable D-aminopeptidase | chromosome | CDS | 3513879 | 1149 | - | 0.704091 |
NA | BPP3170 | putative hydantoinase A | chromosome | CDS | 3410115 | 2136 | + | 0.68633 |
NA | BPP1116 | putative hydrolase | chromosome | CDS | 1189938 | 906 | + | 0.717439 |
NA | BPP3441 | putative oxidoreductase | chromosome | CDS | 3717545 | 783 | - | 0.687101 |
NA | BPP2713 | conserved hypothetical protein | chromosome | CDS | 2908278 | 1731 | - | 0.699596 |
NA | BPP0971 | putative isochorismatase | chromosome | CDS | 1042153 | 627 | + | 0.636364 |
NA | BPP3037 | hypothetical protein | chromosome | CDS | 3277757 | 621 | - | 0.647343 |
NA | BPP2711 | probable short-chain dehydrogenase | chromosome | CDS | 2906519 | 714 | - | 0.728291 |
NA | BPP2770 | Conserved hypothetical protein | chromosome | CDS | 2969115 | 885 | + | 0.698305 |
NA | BPP2761 | probable short-chain dehydrogenase | chromosome | CDS | 2961393 | 759 | + | 0.725955 |
NA | BPP2296 | probable short chain dehydrogenase | chromosome | CDS | 2442610 | 768 | + | 0.722656 |
NA | BPP3698 | putative enzyme | chromosome | CDS | 3998018 | 882 | + | 0.623583 |
NA | BPP1749 | putative malonyl-CoA synthetase | chromosome | CDS | 1872936 | 1542 | + | 0.696498 |
NA | BPP0513 | putative hydroxylase | chromosome | CDS | 545639 | 459 | + | 0.444444 |
NA | BPP0915 | putative long-chain-fatty-acid-CoA ligase | chromosome | CDS | 988071 | 1878 | - | 0.719382 |
NA | BPP0940 | probable short chain dehydrogenase | chromosome | CDS | 1012183 | 780 | + | 0.74359 |
NA | BPP0698 | putative membrane protein | chromosome | CDS | 734603 | 1356 | + | 0.682153 |
NA | BPP0161 | putative integral membrane protein | chromosome | CDS | 176162 | 1137 | + | 0.687775 |
NA | BPP0287 | conserved hypothetical protein | chromosome | CDS | 299010 | 1035 | - | 0.725604 |
NA | BPP2513 | conserved hypothetical protein | chromosome | CDS | 2707212 | 648 | + | 0.692901 |
NA | BPP0162 | probable ATP-binding component of ABC transporter | chromosome | CDS | 177298 | 840 | + | 0.679762 |
NA | BPP2429 | putative acetylpolyamine aminohydrolase | chromosome | CDS | 2603270 | 1065 | - | 0.690141 |
NA | BPP3118 | histone deacetylase family protein | chromosome | CDS | 3357626 | 915 | - | 0.661202 |
NA | BPP4380 | alcohol dehydrogenase | chromosome | CDS | 4722848 | 759 | + | 0.681159 |
NA | BPP3154 | putative fumarylacetoacetate-family hydrolase | chromosome | CDS | 3393157 | 861 | + | 0.684088 |
NA | BPP0438 | conserved hypothetical protein | chromosome | CDS | 463984 | 765 | + | 0.671895 |
NA | BPP4161 | 2-hydroxychromene-2-carboxylate isomerase family protein | chromosome | CDS | 4495561 | 600 | - | 0.681667 |
NA | BPP3638 | beta-D-hydroxybutyrate dehydrogenase | chromosome | CDS | 3933869 | 801 | + | 0.731586 |
NA | BPP1369 | conserved hypothetical protein | chromosome | CDS | 1470822 | 624 | + | 0.697115 |
NA | BPP1634 | conserved hypothetical protein | chromosome | CDS | 1743881 | 510 | - | 0.662745 |
NA | BPP0988 | probable short-chain dehydrogenase | chromosome | CDS | 1067129 | 738 | + | 0.716802 |
NA | BPP1871 | putative carboxymethylenebutenolidase | chromosome | CDS | 1996857 | 789 | + | 0.69455 |
NA | BPP4160 | short chain dehydrogenase | chromosome | CDS | 4494730 | 765 | - | 0.703268 |
NA | BPP2190 | Putative oxygenase | chromosome | CDS | 2341076 | 864 | + | 0.702546 |
NA | BPP1949 | putative membrane protein | chromosome | CDS | 2087946 | 630 | + | 0.626984 |
NA | BPP0333 | putative acetoacetyl-CoA reductase | chromosome | CDS | 353036 | 753 | - | 0.709163 |
NA | BPP1064 | putative exported protein | chromosome | CDS | 1139661 | 909 | + | 0.705171 |
NA | BPP2647 | conserved hypothetical protein | chromosome | CDS | 2847204 | 696 | + | 0.659483 |
NA | BPP4259 | mce related protein | chromosome | CDS | 4600945 | 507 | + | 0.621302 |
NA | BPP1821 | N-acyl-D-glutamate deacylase | chromosome | CDS | 1945097 | 1443 | + | 0.722107 |
NA | BPP0163 | putative exported protein | chromosome | CDS | 178124 | 948 | + | 0.716245 |
NA | BPP3704 | putative short-chain dehydrogenase | chromosome | CDS | 4003808 | 741 | - | 0.744939 |
NA | BPP3835 | conserved hypothetical protein | chromosome | CDS | 4153332 | 771 | - | 0.713359 |
NA | BPP2732 | Putative short chain dehydrogenase | chromosome | CDS | 2928375 | 939 | + | 0.641108 |
NA | BPP0871 | conserved hypothetical protein | chromosome | CDS | 941787 | 702 | - | 0.606838 |
NA | BPP4258 | putative membrane protein | chromosome | CDS | 4600147 | 786 | + | 0.684478 |
NA | BPP0272 | putative isochorismatase | chromosome | CDS | 282293 | 618 | + | 0.699029 |
NA | BPP3911 | acyl carrier protein | chromosome | CDS | 4236928 | 240 | - | 0.608333 |
NA | BPP0368 | putative short chain dehydrogenase | chromosome | CDS | 388362 | 762 | + | 0.688976 |
NA | BPP4209 | hypothetical protein | chromosome | CDS | 4541030 | 456 | + | 0.677632 |
NA | BPP4257 | putative ABC transporter, ATP-binding protein | chromosome | CDS | 4599254 | 897 | + | 0.695652 |
NA | BPP3171 | putative hydantoinase B | chromosome | CDS | 3412247 | 1662 | + | 0.684116 |
NA | BPP3804 | putative fatty acid CoA ligase | chromosome | CDS | 4117690 | 1665 | + | 0.659459 |
NA | BPP0649 | putative acetyl-CoA synthetase | chromosome | CDS | 687644 | 1509 | + | 0.709742 |
NA | BPP1836 | probable short-chain dehydrogenase | chromosome | CDS | 1959319 | 693 | + | 0.65368 |
NA | BPP3394 | conserved hypothetical protein | chromosome | CDS | 3659628 | 435 | + | 0.726437 |
NA | BPP2134 | Putative decarboxylase | chromosome | CDS | 2282418 | 798 | - | 0.695489 |
NA | BPP2603 | hypothetical protein | chromosome | CDS | 2805298 | 714 | - | 0.662465 |
NA | BPP0573 | conserved hypothetical protein | chromosome | CDS | 606409 | 804 | - | 0.687811 |
NA | BPP2824 | putative 3-oxoacyl-CoA or-ACP reductase | chromosome | CDS | 3025158 | 723 | - | 0.739972 |
NA | BPP2331 | putative isochorismatase | chromosome | CDS | 2479522 | 618 | + | 0.699029 |
NA | BPP2826 | putative dioxygenase component | chromosome | CDS | 3026700 | 528 | - | 0.632576 |
NA | BPP1248 | conserved hypothetical protein | chromosome | CDS | 1344426 | 837 | - | 0.666667 |
NA | BPP2768 | Putative dipeptidase | chromosome | CDS | 2967262 | 1353 | + | 0.670362 |
NA | BPP0574 | short chain dehydrogenase | chromosome | CDS | 607206 | 768 | - | 0.674479 |
NA | BPP0959 | putative acid CoA ligase | chromosome | CDS | 1028891 | 1491 | - | 0.692153 |
NA | BPP3210 | probable short-chain dehydrogenase | chromosome | CDS | 3458580 | 723 | + | 0.710927 |
NA | BPP4337 | putative membrane protein | chromosome | CDS | 4670776 | 648 | + | 0.700617 |
NA | BPP4128 | hypothetical protein | chromosome | CDS | 4460855 | 906 | + | 0.700883 |
NA | BPP1555 | conserved hypothetical protein | chromosome | CDS | 1661957 | 438 | + | 0.675799 |
NA | BPP3372 | short-chain dehydrogenase | chromosome | CDS | 3634515 | 777 | + | 0.698842 |
NA | BPP0882 | probable hydrolase | chromosome | CDS | 952891 | 687 | - | 0.631732 |
NA | BPP2663 | Putative short-chain dehydrogenase | chromosome | CDS | 2859432 | 1008 | - | 0.71131 |
NA | BPP3071 | putative membrane protein | chromosome | CDS | 3309875 | 1911 | + | 0.675039 |
NA | BPP1414 | putative isochorismatase | chromosome | CDS | 1513135 | 627 | - | 0.685805 |
NA | BPP3692 | putative ring-hydroxylating dioxygenase small subunit | chromosome | CDS | 3992767 | 522 | + | 0.609195 |
NA | BPP0576 | short chain dehydrogenase | chromosome | CDS | 609205 | 753 | - | 0.662683 |
NA | BPP0414 | probable short-chain dehydrogenase | chromosome | CDS | 431130 | 726 | - | 0.702479 |
NA | BPP2100 | Putative short chain dehydrogenase | chromosome | CDS | 2248406 | 750 | + | 0.692 |
NA | BPP0697 | putative membrane protein | chromosome | CDS | 734082 | 525 | + | 0.647619 |
NA | BPP0643 | probable short chain dehydrogenase | chromosome | CDS | 681796 | 750 | + | 0.729333 |
NA | BPP2055 | probable short chain dehydrogenase | chromosome | CDS | 2197931 | 765 | + | 0.726797 |
acpP | BPP3304 | acyl carrier protein | chromosome | CDS | 3562283 | 297 | - | 0.521886 |
alcA | BPP3443 | alcaligin biosynthesis enzyme | chromosome | CDS | 3720307 | 1386 | + | 0.575036 |
alcC | BPP3445 | alcaligin biosynthesis protein | chromosome | CDS | 3722313 | 1857 | + | 0.586968 |
benE | BPP0702 | benzoate membrane transport protein | chromosome | CDS | 739973 | 1236 | - | 0.702265 |
catC2 | BPP0410 | methylmuconolactone isomerase | chromosome | CDS | 428436 | 276 | - | 0.65942 |
copA | BPP4109 | copper resitance protein | chromosome | CDS | 4441078 | 1758 | - | 0.668942 |
cyaA | BPP0321 | bifunctional hemolysin-adenylate cyclase precursor | chromosome | CDS | 336053 | 5223 | + | 0.66322 |
dltA | BPP3907 | putative D-alanine-D-alanyl carrier protein ligase | chromosome | CDS | 4233044 | 1464 | - | 0.685792 |
fabF | BPP3303 | 3-oxoacyl-[acyl-carrier-protein] synthase II | chromosome | CDS | 3560864 | 1230 | - | 0.64065 |
fabG | BPP2016 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 2155777 | 792 | + | 0.669192 |
fabG | BPP2625 | probable 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 2821995 | 747 | + | 0.677376 |
fabG | BPP3305 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 3562705 | 753 | - | 0.697211 |
fabG | BPP3213 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 3461358 | 759 | + | 0.706192 |
fadD | BPP2338 | long-chain-fatty-acid--CoA ligase | chromosome | CDS | 2489440 | 1674 | - | 0.702509 |
fadD2 | BPP3729 | long-chain-fatty-acid--CoA ligase | chromosome | CDS | 4031182 | 1692 | - | 0.674941 |
fahA | BPP0806 | fumarylacetoacetase | chromosome | CDS | 866410 | 1359 | - | 0.6961 |
hmgA | BPP0807 | homogentisate 1,2-dioxygenase | chromosome | CDS | 867832 | 1299 | - | 0.675135 |
hyuA | BPP3408 | hydantoin utilization protein A | chromosome | CDS | 3674803 | 2049 | + | 0.690581 |
hyuB | BPP0316 | hydantoin utilization protein B | chromosome | CDS | 329130 | 1998 | + | 0.675175 |
idnO | BPP4378 | gluconate 5-dehydrogenase | chromosome | CDS | 4720534 | 780 | + | 0.714103 |
oplaH | BPP3012 | 5-oxoprolinase | chromosome | CDS | 3237394 | 3624 | - | 0.697848 |
paaB | BPP1674 | phenylacetic acid degradation protein | chromosome | CDS | 1784484 | 285 | + | 0.621053 |
paaI | BPP1680 | phenylacetic acid degradation protein | chromosome | CDS | 1789665 | 471 | + | 0.687898 |
phbB | BPP3195 | acetoacetyl-CoA reductase | chromosome | CDS | 3439758 | 738 | - | 0.639566 |
smoM | BPP1948 | putative periplasmic solute-binding protein | chromosome | CDS | 2086640 | 1095 | + | 0.645662 |
tauD | BPP3209 | alpha-ketoglutarate-dependent taurine dioxygenase | chromosome | CDS | 3457735 | 849 | + | 0.62662 |
tpm | BPP2160 | thiopurine S-methyltransferase | chromosome | CDS | 2310091 | 660 | + | 0.686364 |
wcbP | BPP2953 | putative oxidoreductase | chromosome | CDS | 3170842 | 774 | - | 0.728682 |
wcbR | BPP2950 | putative type I polyketide synthase | chromosome | CDS | 3160518 | 7584 | + | 0.719805 |