Gene list
Applied filters:
COG category: Transcription
Gene type: CDS
Gene type: CDS
Genomic element: chromosome
Number of genes found: 192
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View as list | ||||
# Xanthomonas oryzae pv. oryzae KACC10331, KACC10331 >XOO4506 transcriptional regulator MDTVRTPSDVGNIIRARRKRLGWDQARLAHEIGVSRQWIVDIEKGKPRAE LQLILRALQALGLELILSSDVAQIPPANAPERGTVTPIDLDAIIEHNRSN SRLGTTVLNAFNNNIFKNQFSSLDRLKNADLHRPFSAVDALEQCPAQAAS AVALNRYSSMIDAPNERNLVSEPLQKRFPALDRPTIGETTKISKVISKPS KKKADP >XOO3033 unknown protein MNIRPSDLPLLVSLDALLELKNVTHAAQRLHMSQPALSSQLARLRVLFKD PLLMPSDTGRGMVATPRADQLASPLREAIGKLSLLGKDSAFDPATSSASF RIAAAADAIGTLGAGLAGLIQAQGNRKMRLEFVHVSSDTRLDAFENGELD LLIDHAQAVPDALRLRRLRDERYVLVQRRGHPRGTAALSAASYSRLAHVQ VAHAQACNLAIDAQLRHLGHTRQIAVTVSQCATARDIVLGTDMVATMPAT LAAERGHAPLDCFELPFPLPDMALAMAWHRRNDAHAAHRWLRERVLDLLV PAAPAAAVPAAARRTAGRADLVLSVS >XOO1473 conserved hypothetical protein MAIRNRMPPWHENFSLPNGRTLLLRPIRPEDGPPLQGAFSLLGPEEIRAR FVRSTAEITPEMVQRLTHPNPKSEIVLVAAEQLPPGEALVGAVARAALVP GTRQAEYTILVSSFVAGQGLGRQLMRKLVKWARRKYLDSLFGDVLQSNLP MLQLAESLGFKPQAHPDSPELVRMVLELDA >XOO2343 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog MNDLDPVVTVSDGICALLPRLRRFARAIAGHPADADDLLQVAIERALRHC AQWRPETPLQYWLFGIIRHAWLDEVRAQRRRRQLFVSAAEGEQVGDSPME RQQEWMAVQAAMAQLPDEQRWPIALVLIEGLSYRDAAAVLEIPIGTLTSR LARGREALQALLEEKS >XOO2045 conserved hypothetical protein MTPHASPQIITLNPASDAGALRAVRLACVTDTAGATSGAEWDALDPLSLH LAARTEDGQLIGSVRLTADRRLDRLGILPDWRRRGLADQLLAAAVDTARQ HGWPSLHASPSPNAEAVFARQGFLPDTTLVPLPERIGQTHAAPGGVVHRR LDGPMAVETLTAALAATTGLLCAARRQVLIYTRALDPTLFDNAAVLDALR RFATARHDKRVHVLMQDPASANAGSSAMLRLAQRLPSVFRFRAVSDPVDA SFASVYVVGDDAYYFRPTVHRFDDGETWLSGAARSRQLEREFAQIWERSA LWNEPRALGI >XOO2345 transcriptional regulator marR family MSSFDPTASRVDHTCIRYPAFPREPAVLVRLIKHIYKRLHTHGCTLLKPY GISPPEYEILMMLYGTPAQAITPTEVAEAASEKPANITRLTDQLCEKGLI TRSSSPDDRRKIVLTLLPAGLALIESLLPDVCTLVNAETASMSEAEQVRL ERLLKKLLDGVDAISE >XOO0949 transcriptional regulator MRQNTTPSFVRGAANMQQVITADRGLALTLDSDSESTSTTCLAVSRLGSI RTNAATFTLWVQLRGRAWVESKEGRFRLRAGDWIAFDKDSHPNVQADRSA LCVGVSLDSDSLQSLTELTDATLYPGRAQLSHSDLCIALRLWRNAAAQSV SASARPLLLHLAAMQRDFTEQEQRCPGRSRSRRRQVFGRMQRARLYLEGN SDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLR DTSMMIGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTVNPPDSAKPR NVTRKATVFTQS >XOO3870 two-component system regulatory protein MCQWLTNSVIMMRAPRLAIASTIYPAATTLRGPTSAPQTMTSMDLQPPCV LVVDDDPDLRKLIGEFLSAHGYQVDMAENVAEMRSVMAQRRPDLIVLDVM MPGEDGLSAARTLASERGSPAVIMLSALGNDTDRIIGLEVGADDYLAKPC NPHELLARVRALLRRSQSSNEQSDQRGNVYEFAGWRLDVVRRDLRDPTGI FINLSDGEFALLRTFVEHPQRVLSRDQLLECARGRDTDVYDRAIDSQISR LRRKINERVHTELIRTVRNEGYMLLPSVSRL >XOO1191 TonB-like protein MHLDLPVLLRIALYSSAALLTCLLLRRVLRAWLGATAAYAIWAAVPLAVV AAFIPRLPLAPALPKMPALVAMPLTLQGGEHVWAGELSAVWLAGAVAMAV ALWWRQRRFVRSLGALQALDGGVWAATHDVGLPVSLGIWRPRIVLPMDFD TRYTAAERSLILAHERLRLHLHLHLRRGDLYANLLAALLLCIGWCNPLMH LAWRAFRLDQELACDADVLTRYPGKRRSYATAMLKTQCGAAWMPTACHWN APHALTQRVAALLGPAVDVPRARWNLRLVVALAVLVSGACRALQPAQLQG RRVPGNPLDFSTMQPPKYPADAIAAGLAGFVELQIAVSPNGTPDHIAIVR STPAGVFDRAVLDAARHWRFAPALVDGEAVASDVRVPVKFELDPPDPDPD PASASAIAAMDTDTDAARTPHTVARSERVASCTQAECARRGALQ >XOO3631 ECF sigma factor MRPADHTHAARVQAPVNRIRARPLTSYRVRGSYAVLVGTPFDPQPAAPAA TAPVSLDAFLAGIGPRAFRFAEAGLRHREDALDAVQDAMVKLLGYRERPA AEWTPLFWSILRRRIIDLQRRRSFRLKFWAPAERADDEGPIDWADPDPDP DTGPVDEQQHQQAYQRLVDALRTLPARQREAFTLRVLEDLDVATAAKAMG CSEGSVKTHLSRARDALQKQFEDFL >XOO1109 transcriptional regulator luxR/uhpA family MADLTILVADDHPLFRAAVLHVLQQTLPQANVVEASSAATLSAMLRSHPQ AELVLLDLAMPGARGFSALLHVRGEHPDIPVVVISSNDHPRVIRRAQQFG AAGFIPKSTPAESIGTAVASVLDGGTWFPPMTAERSEADAQLASKLAQLT PQQFRVLLSLADGLLNKQIAHELGLAENTVKVHVTAILKKLDCYSRTQAA VLVKALEPEGEG >XOO3727 transcriptional regulator marR family MAARLSLAADLGYQLQLAALASSHAARQELAELQLTPARATALIHIRDQP GCDQTELGNRLLVNRAAGMKIANALAEQGLIERLAGRDRRSKGLYLTDLG ERTLLVAQGCLARAGERTCTGLQASEQQTLLHLLCKLNASAALERAAAPD TALAEAL >XOO2803 transcriptional regulator tetR/acrR family MTTRPHRAARRSDCDRRIHAAVHALLAERGMRLSMDAVAERAGCSKQTLY SYYGCKENLLRDVLQDHMHLAAGPLGTVSGDLRADLLAFALAHLDRLNNP DVLQTCRLVEAESHRFPDQSQQIFHDGVVGPQQRLAHRFEQAIEAGELRH DDPHFMAELLLSMIVGLDFDRQRFQVSHRAGLPARQQWAQFAVDAFLRAF ATAPAAPTLAPPSLLTSRP >XOO4005 conserved hypothetical protein MDRYERINSLHRLLKSARYPVTVARLQDELSCSRATVYRDLAFLRDALMA PVEGDGESGFRYLTGESDRFELPGLWLSSEELHALLASQQLLARTGGGVL SSMLAPLQQRIEVLLAAQAGVSQWPVDRVRVIPHRGRKLDEASFRTVASG VLERKQLSFDYRARSTDESTKRTVSPQRITHYRDNWYLDAWDHGRDGVRS FAVDRINHARLLDAAPRDVPDSELDEQLAATYGIFSGAPKGWATIVFSAK AARWVADEHWHSKQQGRFLPDGRYELKLPYSNSRELLMDVLHYGSDAEIV EPMSLREQAKTLLSLALSNYD >XOO4072 transcriptional regulator marR/emrR family MNDLAPPHPPQQPVLLDLEQFLPYRLSVLSNRISSNIAKVYGDRYGMAIP EWRVITILALYPGSSASEVSDRTAMDKVAVSRAVARLLERGFIRRETHGD DRRRSMLALSPAGRQVYETAAPLVNEKEQRLMSVFSAEEQQILEKLIDRL AKDGLPRMASKD >XOO3030 VirG-like two component response regulator MSKLHSRSSSSSDASTPRSAPVAKVLVVDDDQAMAHVVMGHIRSHGMEAF VATNSSELAEALRRREPDILLLDLMLKHEDGLDLLRALRKESDIPVIIMS GHRRDEIDRVVGLELGADDYLPKPFGLHELTARIRAVLRRHITSKMAAAR GAGEGRVRFDAWEFDLQARTVGRTGAPAIALTKGEYALLRAFVDAPGRPL SREHLMRATRLHEDVFDRSIDVQILRLRRKLEQDPREPTLIVTQRGAGYV FTPSVEHAR >XOO4618 sugar diacide regulator MASARRIEPRQRRSAPFAQMLGHRRATRPTPNHTRGEQVRTEHATVTSLD RINRPQPMLTLDRTLAQSSVDRAMTIIDGNVDAMDHSGVIIASGAPARFG RLHARAQSVRAHARQQPAADPAGPGPVFSAVQRPGVVAPDRAHHHAHRQG ACAARRCILLRQLSPAAAGRRPASGLASRAIAQAAAGIAGAGPSRPVVED LVGLVWCRHAHGPHRQGAGHPSQYPELPHAAHAGTVRSGPEQHRRLHAPV PGAADARRQRRHRGEHGHGQRRLSAAPPAQRAQCGAVQWRTERRLG >XOO4461 DNA-binding protein MSGKSIHKAEYAILLQQLRDLRLQAGLTQAELSATLGRPQSYVSDVERGE RRMDLLQLRDFCTACDASLANFVADLERRLGS >XOO0312 acetyltransferase MLIRSIDAMTRPLSSEVVKASGGASQTTLPGAQAIALRGEQDADLPWLQY LYASTRSDELARVPWPYATKRAFADQQFALQRTHYRQQFADADFLIVQAN GLSIGRLYLHRATAHHTLVDISLLPDWRGKGIGSQLIAHAQARACDAGCA LSLHVLHANPAAQRLYVRLGFVAGNSTQTHLQMHWHPRDHLLS >XOO4348 transcriptional regulator merR family MRATYACRMAASSKPLLRIGALTLQTGAGVRAIRHYDAHGWLTSSRSANG YRVFPAACVAQVRGRFSG >XOO3035 serine/threonine kinase MTTRDHDMTGRTSPPDDDRTRVRPARDLADTPSVPPAADDEVTRLAPLTR QRAAHACDDAATRVNPLAHADDSAGASSWRRVAQLQGDAQVGVGMLLKAR FLLVREIGRGGMGVVYLARDERKVEARDRHPYIAVKVLNDDFRRHPDSLI ALQRESRRAQSLAHDHIVRVYDFDKDGAIVFMTMEYIEGDDLRGLIRSRL GEGMPLAEAWPLIEGMGRALQRAHAAGIVHSDFKPGNVMVGAGNLAKVFD FGIARAAKLAGAESSDDHTVFDAATLGALTPAYASMEMLRGDEPAFADDV YAFGCVVYELLSGRHPFAKQSATQAQAQQLRVAALPTLSRRQMRGLRSSL AFEAAARPTMTVLLEQLRPRSRSERAVPYLLAGVLLLAGGVGATVWMQVH AQREKVAGVLERFSPQAPNRFAHEAHARAALWALGEDDRRRLILDHSSTI EAFLLRRLDHYWQPALGREDYVGAQRILSVRDQWKLFSPRLDARRSAMEQ ERDRLLNGLDTALTGAIAAGALFEDQPGNVVALLDRVRRLAPDSGLLRHA ELELRYRRGCADALTAGRRNEARRWLDTGRRVFPQSALLRECAHELDAAT VTASATPSAPPAPLVEDAQARLAAQIATRIESVRAAAAANDVAKVKRQLA QIAASSPEHPFLRSEGAQRLTDAYLGLARSLCRDGRWKEASVVIGQGLDA QDTPRLRQALGRYRLAMELEQLGTALPAPSVLQRLRERKMALQAQDADGF RAFQSDVAKSARQRVSYTAALLPKLEPVAVMPAPPAKPSDPCRLSAPSSG AATCSDDLGKHGRGPELVVLSKPGRALAMMRREISVADFALFCADTQRCR VSRWTRKSAPVDEVSAALIRDYAAWLSSASGRTYRLPRDAEWLRAARAGE DGCTATVSNSWGLLDMVGGLAEWVQEGEGVSVRGSQRGVAACASPGTVSS NGDAARGIGARLVRDVE >XOO4380 transcriptional regulator acrR family MTALAAAAGVSTGQIYRHFPSKAELFVEVLNEAVQRETTILRAIAATQAS AAGRLRSAIATFVRRALAGPALAYAFIAEPVESEVDAARIRGRRLFGEVF RQLLAEGVAAGEFPQQSLDAAAACIVGAFTEALVGPIAPSRGDPQQGEQL VEAICGFCLRAVGAMQPTS >XOO2206 iron dependent repressor MANSIVLIGCVLQTMCPAPMPATIARTRVGKSEKMEAAAPVLIDAQVHME SFRQVRQARRAELVEDYVELISDLLVDGGEARQVDIAARLGVAQPTVAKM LKRLVRDGWVIQRPYRGVFLTPAGEALAASSRQRHQIVERFLLALGIDEA TARRDAEGIEHHVSEATVAAFAAFLDRQGSSAT >XOO0550 transcriptional regulator pbsX family MSKLYERVREARSLTKLTQEALAGELGVTRSAVAQWEMAEGTAPSVENLI GLAKRSGMAFEYLATGRGDRVFGPPVSAIAEEPAQYRRLDDQQRVLLTRF DTLAPRQRSGLLDLLLAEGKTRRRR >XOO3857 acetyltransferase MSAMRIACVAETPAYLPEIAQAHLQAFGTLLPEWNLDEALSELCSHARDG VIPTTWVAKDEAQWLGSVSLLENDDARIRQWSPWLASLYVQPQARGQGIG EALVAHCVQAAARLCVPLLYLYCQPALVPFYQRLGWQTHAEFLLGPMHIV VMRSAPGAVTR >XOO2674 conserved hypothetical protein MTNASPRASHGNDCSICFHCSPFGRVATRSTRLPLEVSGGAPHRPLRGTF SRWEKRAIAMESMPALRISTDKQELDLPLIHRFLSEQAYWCLGIPLDTVQ RAIAGSLCFGGYCEGVGQVAFARVITDGATFGYLADVFVLDAHRGRGYGK QLVAAVMAHPHLQGLRRFMLATSDAHALYAQHGFAAPARPQALMEIAYPD LYRTTTTAA >XOO1498 conserved hypothetical protein MSIKRNSVLGVYGTFAIWAQLRIAVFSAWPYLYEGDAAYERAYLAADAAS PESVFVLARAGETVIGASTGLPLLDDSGAFHAPFRAAGIDPASVFYFGES VLLPAYRGQGIGHAFFDQREAHARALSRFALTAFCSVERAPEDPRKPGDY RSTMCSGASVAMPRSLACACIWNGPSCNTARSTTA >XOO2124 transcriptional regulator MDACAMHDLNDLYYFAMVVDHGGFAAAERALGIPKSRLSRRISQLETDLG VRLLQRSTRRFAVTDVGTSVHRHAQTMLAEAQAAREVVDRLSAEPRGLVR VSVPVSLAQIQLPKLLPEFLAKYPKVRLQLNISNRRVDVINEGYDIALRV RSRLDDDGSLVMRSFGQVQELLVASPKYLDRAGRPKDPSELANHTTMSTS EDEAHQRWELHGPNGERRVDLQPRLAGFDFPLLQSMARDGFGITMLPETV CAEAVRSGELEVVLPHWSLPQGICHAVFASRRGLLPAVRVFIDFLAEHLP QEIERSRLDCGGTCAELAEKLKRAAGTAPRLVVAEAG >XOO0190 transcriptional regulator lacI family MQRQASLRSTAPPGPVESTQLHWLTAMPARKMPEEGMHGLPKGKVATIND IARMSGVSKKTVSRIINNSPLVRQDTREKVEALMRQVGYAPDPLARGLAF RRSFLIGMVYDHPTAQYIVDMQYGALDALRGSSFELVVHPCDSRSPGYIE GARRFAQAQKLHGVILVPRASEDQALADMLAEIGCRYTRIASIALDATSQ TVITHDRDGAAEAAEYLLSLGHRDIALVTGPSAYRSSIERTCGFADALTR RGIELPPERIVEAGYTFESGVAAAEKLLLGKKRPTAIFTGNDEMAAGIYK VALRAGISIPRQLSVIGYDDSSLASRLWPPLTSVRRHTRDTGRTAAAMLI QPDNAPQLPTASVRPHLIVRESCQPPED >XOO4350 transcriptional regulator lysR family MELRHLRYFLAVAEEGNFTRAAARVGIGQPPLSQQIQTLERELGTPLFRR THSGAELTLAGEAFLGEVRRVLADVERAAETARRVARGESGRLRLGFTAS AAFSPVVPRLIRDFRRTWPQVELLLDETNTASLLVGLAEGRLDAAFVRYG LSTPADLQLLRFTDEPMKIAVPAAHPLATRNSAPLAALAGEPFILFPRSF GSSLYDEILAACRESGVTLRITQEAPQMSSIINLVAAELGVSVVPASTAQ LQRPGVRYLDIEGHMPLARLALAVAPAALETTPLVRHLWALAELI >XOO4549 transcriptional regulator MPPKWVSWRRPYDTAGYAVISRRRVAAALASASQPERQRADRLRVAGVLT RAQLSRGTGLTVQTAVRLIEDLQARGMVQMGEAVARSGRGKPAMAVSLNP GYGHTLGISIATDARTLALADLSGSVLAVSEVALTDDTLCGVLTRLQAAD ATLLACVDAAGTRLGIGVAMSGFFTGDDAFINPPEPLRALGWIALCSWLA EAFGQPVRMDNDGSVAAAGEAMLSVGQRHRDVA >XOO1688 phage-related protein MTVGKRLKEERKRLGLTQDEMAVQLGLTRYAQLNFEKDVNLPGGAYLLAA LERGVDVMYVLSGHRAQLDPADRLLLSAFKDASPAARNAVLAALGLSADA SSSKTGTGPVLSFNKSEIGSIISTTAPIDQSNMQIVVGGRKKKSK >XOO2588 response regulator MSKLTVLLVDDHEGFINAAMRHFRKVEWLNIVGSAANGLEAIERSESLRP NVVLMDLAMPEMGGLQATRLIKTQDDPPYIVIASHFDDAEHREHALRAGA DNFVSKLSYIQEVMPILEGLTVRSQE >XOO3020 unknown protein MRQDDQRLIRLLAATLTRRPRSNLTELAAGAGISRATLYRFAPTRAAIVE KVTAEAWVRLQAALPGGDASPDPMARLRRTTHALVEDLDLVIYIVNEMGM EGAERGNTYYAAPEWESFQAHLDAFFLHGQQRGVFGIEMPASWWSDFYLS CLFGAGWAVATGRLAQASVVRAVLTSFLEGARSGSRMQPSLP >XOO1997 transcriptional regulator MSIENSPTRIDALPPGVRTSFEKADGPVLIAFLAELREVWAPETVWHAHV RGQLMYVEHGMLTVHTEQGTLSLPPGCAGWLPPGRQHTVEPAGPMRGWGV GVRPDACVTLPAQGRVIRLTGLAREAIMRAASWPLDQPLDAAQQRLAAVL LEELRQVQIDHLHLPMPADRRLLRIARQLLDTPADPRSLEQWADWGGLSP RSLSRHFRNETGLSFAQWRQQARLAEGLRRLSQGNAVAQVADQLGYSSPS AFVSVFHRHFGAPPARYFASSHARGLASTAASG >XOO2162 conserved hypothetical protein MRRCNSPANSTTAMPPTNPSEADHRMDQALITRIIEAALLASSQPLTLAQ LQGLFPEEEPAPPGSVERALELLREACAERGVELVEVASGFRFQVKADVH GWVARLWTERRTKYTRATLETLALIAYRQPITRGEIEQVRGVAVSSNIIQ ALEERDWIRVVGHRDVPGKPALFGTTKGFLDYFGLKRLDELPPLSELKDI AELEPQLPLDRDGQLDGAVPASAAMDAAQDQANADTADAEGGDSDAAADD ADGEADANAGAEVDHSNSGSSGSRDGSEADETDAAATPAGTTDAASDHRT KAELDPESEIDTDIDADQHAQEPASDAGWDQQDPDLDEAIGTEATNAVSE QTPQHPEHDSAHDQHTQHPDDAREGDPDTAPGTRADAVNEDEDNAVATTT VAVDEADSDPEADPQRVGRSQTHE >XOO0929 transcriptional regulator MSSSPTLNSKAKSNGPGRPKDLGKRAAILGAARAMFMELGYAGVSMDGIA ARAGVSKLTVYSHFGDKESLFSEAIRAQCQHMMPDDLFDHAPKGALRDQL TEIAHAFFAMVSTESAISTHRMMMAPGTGDVHIREMFWDAGPKRTQRALA DFLSARVADGQLEIPDVTRAASQFFSLLKGELYALMMCGLQGPPTPAQVD EHIDTSVDFFLRAYAPR >XOO2536 transcriptional regulator tetR family MPKSAHFSTKDRILGAAEELFAQHGFAGTSLRQLTTQADVNIAAVNYHFG SKENLVNEVFRRRMDEMTTARLQQLEAAKKSQPGELTAVLAAFVEPALAM AQDRQNGGAFVRVIARAYAEKNDNLRKFLSDHYGHVLREFGKAITGCVPG LSKEELYWRLDFLAGALTYAMADFGLIKRPAGVSEADHRARAARELIRFA EPGFRAHSTP >XOO4219 transcriptional regulator MarR family MRMGHIARTGTPAAFVARTAMPVTALAAPLPDAVTEVDQARLLRLLGYRI TRTELLVRRMFQECVAAFDLKPVDFSLLMLVDGNPGINQRQIGDVLHVSP PNLAIVVARLVKRRLLRQVRGRQDRRMQHLSLTASGAALLTAAEAEVRRM EQQLSAVLGSSEAPLLRALDRLDRLDSRP >XOO0859 putative transcriptional regulator MSVSRQHTITEAISAQIAAGEWGQDQRLPVERALAERFGCTRITLREALQ QLEAEGRIYRENRRGWFVSASRVRYDPTSIAGFMQYVAAQGRKPRTELLS ATRQVAGAAYAAALRLDSPYDEVFVLQRRRWIDRRAVLLETNVVLAAWAP GLLEHDLAGSLSTVFNQQLGLFLSRAQLSMHPAGLDAAQAMLLQSAPGTP CFRLQRISFAEDGRAVELDIESWRHDAVDVVVRTEAPTRSAL >XOO1507 transcriptional regulator MAPCLRRSTPAAQQALVQATALRIAQQMPMRTQQPQDLQMRLRGALVQLC CGSGLQPLPLGGTGRHREAGTFCGHGMTNVRETAHMIRPARERPISAEAV SAQSQPQLPLHCPADATLHTAGLAADTTCTLAGSVPSRLERIASSTGFRM SSLTELSTILLRHAPGDGMHPTQIVGLQIMRSGSPTVAMPSVYTPMLCLV AQGRTQAMLGAQAYVYHPQMYLVASVDLSIVGSVIEASNAQPYLCFCLDL DTAVLSELAINHPELVDTQRDAASAGLLLNHSTPQLQDATEAARGLPCSA RAAQRPLQSAAAFAHVEAAPSPPQHRHHSCLLCRLLRLAHLLQPGDGRAA LRLGNGDMRHRHVGIAAVPMLDAGRNPHDVARADLLRRLAPLLHAPGAGG DDQRLAQRMLMPRGARARLDGDGGTAYPRRRVGLERCVDAHLAGEILGRP HCRWRPARLVHLDRRCGFARSTSGHHR >XOO3710 two-component system regulatory protein MAGMTREEILGSRILIVDDEPANVRLLEDLLQREGFQHVIATTDPLRVMG LVSAFAPDLILLDLKMPELDGYALLEQLARLSDPGQFLPVIVLTADPSRS ARHRALGLGAKDFLTKLLDTFEVALRVWNVAETTLLFKRLRALAAPDATP PGWRRQS >XOO3142 transcriptional regulator MTATMTLMDLNLPALEMQTLFDALPDVVFFIKDSEGRYTHCNLTLVRRLG SKLRSEIIGHSPLEVFPLPLGGSYMMQDRRVLCGELIDNQLEVHLYPNRL PGWCLTFKRPLCEANEVIGVVGISRDLGQPDSRHSAYERLSQVMEHMQAN FGDNLRVQSLAALAGLSVAQLERHFRRVFQVTPQQLLTKLRIESAMRLLY GDDSIASIGQQCGFADQSAFARQFKATVGMTPRDYRALKGQL >XOO3155 hypothetical protein MLSGPTTTIRPCCGSSPGQQTSRPPARREGQGWRARYACLIGNRIRRQFA QWRGSYPSVVIDIYRFYGTICRIMDTTVDKLLELVRTRGLLRPHDLAPLG IPRVALTRAVRRGQLERVGRGLYGLVARPVSAHGTLAEVARRVPKGVVCL LSALRVHDLTTQAPFEVWLAIDNKAAAPKLDYPPLRLVRFSGPALSEGVE EHVVDGVPVHVTSVAKTVADCFKYRNKIGIDVALEALREAWVARRMTSDE IWHYAKIDRVANVMRPYLESLA >XOO1657 acetyltransferase MPKCTCRSARSRSDPRSSTATPSAWPCYLCAASDLPGTASLGQSARRSMS WRTSACAAWRMGGASRQWRTATFPGAVAASRAARVRLMMREILVEPANAT RATSGGGSELRAGDQAWGAALSMRGAPQHVAPDLVMLRPASSAGAAMSES QDALLFHIPHSRFPTCSSAAACEKLPRRLARGARMTRIRRATPDDAEALS LLAAQTFTETFGHLYPQEDLHGFLEETYAVERARIVLAHPDYAIWLLEMD NLLVGHAAAGPCGLPHDDVRPGDGELKRLYLLKDYQNSGWGSRLFETALQ WLERDGPRTLWIGVWSENFGAQRLYARYGFEKVGEYDFPVGKIVDREYIL RHRPVLAAA >XOO3918 transcriptional regulator lacI family MRSDGQGTSMRRPTIKDVAERAKVSLKTVSRVINNEPSVMQATRARVLRA IADLDYEPDPSARNLRSGTPFVIGVVYDNPNPYHIIGIQNGVLAACRETG FGLQIHPCDSTSPLLAEELAEWVQRSRLAGVVLTAPISERPELLAGLAAR GIKSVRIIAATDDPGNGPCVYIDDRDAAYEITEHLIQLGHQRIGFLWGGP QHRSSGERYAGYEAALKDYGIALDKHLVIPGDYTFDDGFRGARRLLSLRE PPTAIFGSNDEIAAGVLAAARSTSMNVPYDLSIAGFEDSPFSRQSWPALT TAKQATDDIARHAARLLISQLRSDAYDDQPAQLQNRGFVPQLVVRGSTAP APASTGKPLPPNPPEPR >XOO3104 AraC-type DNA-binding domain-containing proteins MMFDLEIEPYLIKEAFAGALNVSRCMLGPDIRPRAVESAFAQAAPVEAYT RFFRCAVRFDAGRNRMTLDAKWLAARLPGYDRTTCGLLRHQLETLIQRPP SRNDLVESIALRLRSDAGRAPWQPELARQAIAARARCGVGSARSRSATGR CAMPPATNARRICCAIRR >XOO4358 transcriptional regulator, LysR family MAAMPDICPHSLLMRDRRTAHRHFGRLLRSDIVERAAHVDRTQEMTLFAA LAEQASVAAVARRLGISNATVTRLTQVPSYQVREHLQNATLVCVLDAFEI AAEPVQVVYAEGRRGSSKMRIFIDECVAALRQDLGFSTHVY >XOO4448 transcriptional regulator tetR family MTSIALPSHDAPPSRKPAISREDLIAAALSLIGPHRSLSTLSLREVAREA GIAPNSFYRQFRDMDELAVALIDLAGRSLRTIIGQARQRATSTDRSVIRV SVEAFMEQLRADDKLLHVLLREGAVGSDAFKLAVERELSYFEDELRVDLI RLAAADNAKLHAPALVSKAITRLVFAMGAVAMDSPPEKDPELIEQISQML RMILTGARTLGTHGGGFNSGSQHQRL >XOO4194 conserved hypothetical protein MQVHNTPAEHCGMMPPLAVFQCLPMTPSCTLASALQSLQSQFIAMPPVLS MGIAVDGLHDGALRLRAPLQANVNDKANAFGGSLASLMTLASWGWLTLQL QLAGHSADVYVADSQLRYVAPVYEDLVANAEPSELGSWETFLATFRQRGK ARIGMRAEIALGSGAAAATLSGRFVAFPKR >XOO2864 conserved hypothetical protein MHTFWSVLMEATVAERGQITLPKAVRDALGLTKGTTLKIELDGGRIILRK DVSEALRKVRGKFKLVDGLTSTDAAMRVIRGRAPGDPFDP >XOO0026 transcriptional regulator MRAQLRTATATDLRSGELCCFSAPPCRAWSHLLAIVEAPSSCAAGISAMS LRRERVTQLGSVSRFRLGRLLVEPERLTLIDDGQTIALEPRMMEVLIALA ERPGEVVSAEQC >XOO2075 transcriptional regulator MDLEDWSARLKVFADATRVRLLALLEQEELTVAELSAITRLAQPRVSTHL AKLKEAGLVRDRRAGVSAYYRFDEVSLDPAQRALWLALSTGSDDPLLRQD AERVAAVLANRAADQNWADSVAGDMERHYSPGRTWEALARTALPLLETGD VLDIASGDGVLAELVAPHATRYICIDTSARVVAAASERLRKLRNVEVREG DMHALPFPDASFDLVVLMHALTYAAKPAQAVAESARVLRPGGRLLLCSLA KHEHRAAVHAYGHVNLGFAAKELRKFAEKAGLDVSSLETVTREKRPPHFE VISLIAMKPGMGSRDSGLVENKDTAARRTGP >XOO2029 Heat-inducible transcription repressor hrcA MRASQSPMLDPRTRQLLRTLIARYIRDGEPVGSKTLAQHAGLDVSPATIR NILADLEDVGLLSSPHTSAGRVPTAHGYRVFVDSLVQMQPPGEEEVRRLR AELASGNGTQSLLGSASQMLSAMSHFVGVVSAPRREQFAFRHIDFVALDA RRVLAILVFADNEVQNRVIEPRRAYEPAELERVANYLNAQFAGRALADIR ACLLRELRMAKNEMEQLLAHSVDLASEALVPADADDMVMAGQTRLMGVQD LSDLDRLRELFEVFASKREILQLLERTIQAPGVRIFIGEETGMVSLEDVS LVTAPYTAHGQVLGVLGVIGPKRMAYDRLIPLVQTAADVLGAAMESPGTR >XOO0252 transcriptional regulator lacI family MSRPRSEGGSVTIKDVAREAQVSVATVSRTMNGHQHVAESVRERVLQVAR ALNYIPHHAARSLSSRRTHTIGVVLPDLHGEFFSELIRGIDQVAHHQGYH LLVSSSHGDPQAQRRALERLPGRVDGVVVMSPSLGDSGVHEDALPGCLPA VLLNCAGSASQRPVLNVDNYGGARVMTRHLRDGGHRRIAFIAGPDDNFDA HERLRGYHDEMAMDADAQPWVLPGNFDEESGYRAGQSLAQDTRPDAVFAA NDMMALGCLFALGHAGLKVPQDIALAGFDDVPMARYVLPALTTMRVDIAG LGAGALQLLLGQQLVDAPALPADAAPPALSEMVPELIVRASSAARGTPGQ >XOO2344 hypothetical protein MKDIDESTLLAYADGALTPDQAGRVEAVLAADPQRAADVRQLQQVKARLR NGYASVLEEPIPAHLLDAARQRPPPSPQTSVVTATAPIQAPATRQHATRR WAVPTSIAAALLIGLWLWQRQPAQPAPSALLAEQGHDASGTLALALDRQL SGEQQGKIRMGLSFRAHDGRYCRSFSLQSSHAGLACRQGERWRIEAVSPL QPQRNDSELRMASSTLPAALLDAIDARIDGQALDAEGERSARARHWR >XOO1804 transcriptional regulator MMHTATDSSVWLNRAMNDTTDSSRTTPRAGSGRGNRLSADDWAQAALDLI AEQGVGAVAVEPLARRLGVTKGSFYWHFPSRDALLQAALERWEIFEQKEV FGSLEDVPDPSARLRALFQLVAHEVKPHVIYSELLKALDHPAVRPVIDRV SQRRLDYLIASFRQAGLSRTDAQHRARLAYAAYVGFLQLSLQLQQPKQAR EDFEAYVEHVIQTLIPG >XOO0600 unknown protein MSIKAMNWAWEQRLPPNSKLILMALADSADEIGKCWPRVRLIAEKCCASE RTVQRVLKELEERGFLHIERRFRGDGGQSSNAYYLCLESPPVNLSSPSLT PSDKLSPGGDAAVTPPVTRQTSQGDRTVSPHEPPTRTINKSSLQLPAKVI HTPPPSPVPGEAEKGACGALVWPSRLNERERSAIASMVSGLDANDAQMLL DELAGVMATQSIKTSPERWFRAVLDRFHQGRFAPSAGLAAKEKRLRIQST PAETPVQTASPEVIRHHLERIQTMLGRKGATVE >XOO2586 response regulator MRVIIVDDHTLVRAGLSRLLQTFAGIDVVGEASNAQQALDMTSLHRPDLV LMDLSLPGRSGLDAMTDVLRAAPRTHVVMMSMHDDPVHVRDALDRGAVGF VVKDAAPLELELALRAAAAGQVFLSPQISSKMIAPMLGREKPVGIAALSP RQREILREIGRGQSNKEIAADLGISVKTVETHRARMMESLGCRRANDLVL LAAKHHNELV >XOO3188 maltose transport gene repressor MVNEETRKRILRIAHELNYKVDKNPSPLRL >XOO0935 transcriptional regulator lysR family MAMDLASLNAFVAVAASGSFSAAGEALHLTQPAVSKRIALLEAQLSARLF DRLGRQVVLTEAGQALLPRAQRILAELQDTRRVLEHLGAAFGGRLSLATS HHVGLHRLPALLRSFATQHPQAALDIQFLDSELAYAAVLRGELELAVTTL APETHAPLRAQPIWHDRLHCVVAPDHPLAARPAVSLDDVVAHPAVLPDPG TFTHRIVANLFAERGLAPSLRMTTNYLETIKMLVSVGLAWSVLPERMIDH QIVALPLADVALSRELGCVTHGGRTLSRAARAFVALLHAQADQAQA >XOO1247 conserved hypothetical protein MSIFSKLITLLRGTAHETGQKAVDANALRILDQEMRDAGAQLTRSREELT KLMAQSKLAQQKIDARAGKMAEYTRYIEGALAKNDEALAHEVAVKLAALE SEDAGDKAAKTALDQSVVTLKATIQKTENQLRGMRQQIDTVKATDAVQKA QAAIAARHSGASSKMGSALESLERIKARQAETSARIASAEELESSTGDGD LNRRLAAAGLMEGESNAAAVLARFKKPAAQLGHENTSGSAPLIGQVRDVQ QVPRSDS >XOO1188 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain MCGRSLPSSEQTSRLHCMRILLVEDDLSLGEGIRTALRRAAYAVDWVHDG VSALMALQEQTMDLVILDLGLPRMDGIGVIRTARARAVDTPILVLSARER AADRALGLDVGADDYLGKPFDTNELLARTRALLRRSAGRTQPALQAGALR LDPAGMSVRWHGRDLDLTRREFALLWLLMEQRGRPIGRERIQQHLYGWDE DVASNAVDVHVHQLRRKLSAAVIRTIRGIGYALDEQAAQAAAAPPQAPQ >XOO0532 transcriptional regulator lysR family MRDCMPTLRQLELAVAVAEEGGFTAAARRRNTVQSALSHQVAKIEETFGA CLFERGTRQVRPTTADEVFLHNARQTLRAAERLHEEMAQALGTVRGRLAL AQISSLTTVQLPG >XOO2798 two-component system regulatory protein MPSRPLLCVDDESSNLATLRQLLRDDFALVFAKSGGEALDAVTRHTPKLI LLDVELPDMDGYAVARALKQQPSSNAIPILFVSSRNSEHDERLGLEAGAA DYVSKPYSPTLLKARIATQLKLAENVRLAQQYRDAIHLLGTAGRGQDANT GAHIWRMAVYARVLAEAVGWSPQQAQTLQDAAPLHDAGKIAVPGSILQKP DSLDEHERSMVRQHPQAGHDLLRHGRGAIFQLAAEIALHHHECWDGSGYP EGLSGDAIPESARIVAVADVFDALCGRRAYKAPWTVEDAMRKLDSMAGKQ LEPRLVQHFREALPQILQIKDAWDSPAP >XOO2069 transcriptional regulator MDRSNLMPMYAPFFHRKACHVTPAKPTPECTAGGDARRARRGAVTLRDIA GAIGVSRATVSLVLRGSPLVHASTRACVEAELDRQNYVYNRTAANLRQRT SSSIALVINDLSNPFFAEFAAGVNEALGAAGYVTLLGSTGESTQRQQVVL TSLMEHTPAGIILSPAEGSQAQALSQVLGRQRNVVLFNREVEGAQWDLLA LDNAQGAFLACTHLIAQGHRRIVFFGGHAASSSCRQRRAGYARAMQEAGL DTLYFEAAPNRQEAALCGVRLLSSDAQAATAAVCYNDSVALGLMAALAKH GILPGRDFAMTGFDDIAEAALFTPALTTLAAHPRARGRQAAQLVLQRIGS PELAAQQLTAAVALKIRASSACAPVARMSSPPPSSPFAHSPTKASGR >XOO3180 conserved hypothetical protein MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKR RGNRRYYQRHDVLMVRQIRGLLYEQGYTIGGARLRLEGDGAKSESALSNQ IIKQVRMELEEVLQLLRR >XOO4051 N-acetyltransferase MSQPAPQIRGATPDDVPLLHELITALALYERAPDAVKASLEDLRTSLFGE GVTAHALICEQDGQALGFAVYFFNYSTWLGRNGLYLEDLFVRPEARGRGA GLALLRHLAQLAVQRGCGRFEWSVLDWNQPAIDFYRAVGARPMDDWTVYR LDGERLVAFATGS >XOO4328 conserved hypothetical protein MNAIALFPPPSSLEGPFDATKCPVRDVLDQIGDKWTLLILLTLIPGPSRF SAIQRAVPDISKRMLTQTLRNLERNGMITRKVYATKPPSVEYALSKLGIA LLGPVSQLLNWAGEHHADIRAARERFDRAQQTVVTLDRDEAMA >XOO1406 conserved hypothetical protein MLRVTKLTDYATVVLTVLAARCDQVLSASELAEQAGLEAPTVSKILKPLS QAGLVEGLRGVHGGYRLARAASDITLVEIVEAMEGPLAITECSHNHSQCG IAHTCGVRSNWRLINDVVGDALRRVTLAQMLQPLSHPDDTRQRSIAARVA TT >XOO4619 sugar diacide regulator MRWTTPASSSPAARRHVSAGCTRVHSLFERMRASSRLRIRLALVQYFPQS NGLALSHQIARTTMRIGKARAPHADAFFYDNYRLPLLADDLRQAWQAEQL RKPLQALLAQDRRGQLLKTLSVWFGAGMRMAPTAKALGIHRNTLSYRMQR MQELCAVDLSNTDDCMRLYLALQMRDDSAATVANMDTASAD >XOO3527 two-component system regulatory protein MMIRVCLVDDQTLVRQGIRSLLALDDGIEVVAEASDGKQAVEQIPQIQPD VVLMDMRMPVMSGLEALQMLSRNGTLPPTIILTTFDDDQLVLAGLKAGAK GYLLKDVSLEQLVGAIRTVADGGSLVQPAVTQRLLSGLEHMRNEFVSLDR PDPLTDRETEILRLMASGFSNKEIANSLGVAEGTIKNHVSNILSKLGVRD RTRAVLKAFELQLV >XOO2809 transcriptional regulator lacI family MARVAGVSKSTVSRALGTGPVSEDVRAKVEAAVRQTGYRPNLMARRLRSQ QSGILGVIVADIRNPYFTALIRAVEEVAYKAGMRVTLCNTDEDTEREALY LDLMQEERITGLIFAPTRVTVGRMHELSLDYPTVLVDRAGPGSRYDSVVL DNGAAMAELVAHLQAQGYRRIGGLFGSTSTTAAERRDGYLAAMRAQGLEP DYREVAPAAEAAIAELGGWLANDTRPEAIVTSNSLLLMGALKAARTAGLR LPQDLALAGFDNERWTDLVEPGITVVEQPVEDMGRAAMSLLLERLSNPQL PIRRMVMTGRCVMRGSTGARVAGV >XOO2222 conserved hypothetical protein MSTTTLSRSRNDRMIAGVVGGIAHRFGWSSTLLRVLFVIVSIASAAFPGI LVYLILWLLIPNQAD >XOO0683 probable two-component response regulator MSIRASLPDADSLLSVAVLEDDALLREDILIPGLREFGFRVSGAGTAGEL YRLMLQQAFDLVVLDLGLPDESGLSVVTYLRSLFAGLGIVVLTGNRGRSD HARALHGGADAFLRKPTDPEILALTLRNLAQRLRTAHISVTTPSQAWRLQ SDGWCLLAPDGTVMVLTSLERCLMRCLDAQRGQAIERETLVSALEAATGD FDLHRLEMLIHRLRRKAARISSDRTPALPLLSSRGMGYLLAD >XOO3920 transcriptional regulator gntR family MLRAFGGEYGLVHAGQIGTILDLTNPRRSGGQAMAKPRTNARTDDDPRVE ALALDVSAPTPLYLQLATKLTDAIRGGQWKAGEALPAERQLCERLQISRV TLRQAVDVLVEQCLVSRRQGAGTFVTTQIQHQLSGLASFSETLRIKGYEP GTRWLERRLRPAHGEEILRLGLSPDAAVASLTRLRSADDRVMAYEHAVLP QRIVADPQHIGDSLYSYLDAQGTPVVRALQYFRAINLPARLAEHLRMKTG EAILHVVRVGYARDGSAIELTDTYCHNDFYDFVAELRR >XOO0958 conserved hypothetical protein MSHHAAQKYAAMLATLLLTSQAFAADPTPELKQRPPGTAQAVGAVHTLRQ IPEACARLEGVFTGNAAQPYTLSVVRSSPTCQPRARFVDFAKAAPSVASG WIFNDVIRVPSAACPAQQAVVRVWRKPVDAKPQLDGQGQSRIYLEEAKQQ AAAGKIPQVPMFAAQMTVEGKGCQ >XOO2165 transcriptional regulator lacI family MVSSYHGDPGAQGRALRSMRGRVDGLLVLSPYAEQPGFLTDNLPQSLPTV LINAHLPGADYPVLSIDNHAGAMAMTEHLLRAGHRRIAFIGGPALNFDAR ERLRGFRDALAAFGAQAQGVEYPGGFDEASGHRAGLAMLADGSLPDAVFA ANDMTALGCLYAFAQADVSVPGDVALAGFDDIPLARFVHPALTTMRVSIA RLGEQAMTRLMRLVEMPGRDDGIRQLLTPELVILASCGAGEPGQ >XOO0405 transcriptional regulator lysR family MHLCMADTISWERYRSFLAVLEEGSLSAASRALGLTQPTVGRHVAALEEL LAVPLFVRSQTGLLPTDAAQALRGHARAMADIAAALQRAAGRHGALQGTV RISASEVVGAGILPPILATLRHVQPQLRTALVLSNRVQDLLQRQADVAVR MIRPQQDLLVARCVGEIAFGLYAHPDDVDRHGVPQRPDELTQHALVGFDT DTPFLRGACKGFPFWEHAAFALRADSDLAQLALIRAGCGIGVCQAALPQR TPRLLPVVPQQVGVVLDVWVTMHQDLRASAACSAVFAAWATGLSAHCATP EIGTGIN >XOO3795 transcriptional regulator tetR/acrR family MSEPRAAGPSGGQFHRKATATMRLVGEGAQPASGLWHCRTNLSDNAGMTT SRPDAALRRRQILDAADEVFSEHGVNAPLELVVERAGLGRATLYRNFPDR LALMTALMARGLDGLERMAADLADRPEGLAILLHDVAEHIAQSAPLVDFW RSIGRAHPAVDAADRRAVSIFLPFVHRARDAGLCRADVDEEHVLLVIDML GSCLRGNNEAERKRLAHRSADLLMHALGMQVS >XOO2198 transcriptional regulator lysR family MGLKKNSLLLRICSLLSNDMAALNYNHLRYFWAVAHDGNLTRTAERLNLT QSALSVQIRKLEERLGHALFERRGRQLHLTEAGQIVLDHADAIFATGEEL LGTLRQTGAARQALRVGSLATLSRNFQMEFMRPLLGRTDIDLILRSGSAG ELLRALEALNLDVVLLNRAPAGDALSPFVTDRLAEYPVSLVGTPDRLGHA ASFAERLRNHPIILPTVDSSVRIGFDALADRLGVRPQIVAEVEDMAMMRL LAREDIGLAVLPPIVVKDEIAAGALMEGDQLPDIVETFHAVTMSRRFPNP LVRLLLQPAALSGSL >XOO1401 acetyltransferase MENGLSGSATLFPIPDSRFPIPDSRFPIPDSRFPIPDSRFPIPDSRFPIP DSRFPIKLPPMQTTTFRTATVDDIEALVLLVTSAYRGDSSRVGWTNEADI LDGARIDPAMLREDILRERSLVLLAEQDGRLQACAHIADDHGAGYFGMFA VDPSLQGSGLGKTLLAEAERIAHSEWQLPVMRMTVIDVRNELIAFYERRG YRRTGIVKPFPYDDERFGIPLRQDLRFEVLEKQLNGPTP >XOO3858 conserved hypothetical protein MAARVCPAARNVGRTPLMHCPFCQHSDTRVIDSRVSEDGTTIRRRRECEA CGERFSTLETIELKLPTVVKSDGGREAFDARKLRTSFDRALQKRPVAEEQ IEAAVRSVVHQLRMSGEREVGSLRVGEYVMVELRKLDHVGYVRFASVYRS FQDVADFREEIEKLERELPVGSEQLPLLEVALERAGKPGKR >XOO1057 conserved hypothetical protein MVSFDATEALAPYREGRGYGAIVFDRERLRQADASLFSPQSWGDRARPVD KGGRGGAWFVDAPFGRSVLRQYLRGGMAARVSRDRYLWKGAGRTRSFAEF RLMRELIKRKLPVPRPLAACYLREGLGYRAALLMERLENVRSLADHAQLA GRGAPWEATGQLIARFHRAGLDHPDLNAHNILFDAGGHGWLIDFDRGVLR IPATRWRERNLKRLHRSLLKLRGNRSGEDVDKDYERLHRAYELAWGRGY >XOO0386 transcriptional regulator MNSRVRELREASGWSQGELGERLGVSRQTINALETGKYDPSLPLAFRIAR LFGESIEHVFLYEDAQ >XOO3659 two-component system regulatory protein MALRQTHSPEQACDAVLGRVLLLLGLKHGAVLAQRGPRAQVLASRGRALP PGASAAGDGHEAAWLMPPRPAAIGEARVPIHALGTTHGMLCVAWSEDRPA PGNDDVQALQAFALLLPAMVAEPAKQIPTRRRKPLQDDRLGALSKREKQV LSLLPRGLTNSTMLLNPNPLVR >XOO2486 transcriptional regulator asnC/lrp family MKITPSDERLLSLLREDARASTAQIARRLGLSRTTVQSRIEKLERDGVIS GYTVRTHDDYEQGRIRAHILITVLPKKMPAVVKALRDIPEVRLLHSVSGA YDLIALGVVGGVNEMDVLTDAIGAIDGVERTTTSIILSTKFER >XOO1213 conserved hypothetical protein MPHGCAASQTSRLQSRMSHDPTGNMPLKSDTFGRILLIRDGEHVFVRRDL SVAPWVLRGIAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLAGA AMYQRPPHGDLAYFHSARRLLQQLHRCGVAHNDLAKEANWLVQDDGSPAV IDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRT SWLRELWFATGKPVYRFVTRRVLHWEDNEGQGPKP >XOO4455 transcriptional regulator marR family MDTAAVTNAGSDALQLDNQLCFALYSTNLAMHKLYRGLLKALDLTYPQYL VMLVLWETDERSVSEIGERLYLDSATLTPLLKRLQAVGLVSRTRAVNDER QVIIALTETGRALRSRAGAVPEQVACASARSLDELRQLKQELEKLRSSLG TG >XOO2202 unknown protein MLDGVQEIERQFGLGAAGVAAAPVPTRLRVGASTTIGNYVLPSLIAGYRT AWPGAAVDVVIGNTREVAAAVSRLEVDIGLIEGPCHEADLEVVPWRQDAL VIVAAPTHALAQAAKQALVPLKALRQARWLLREPGSGTREAVEHVLLPHL HHLDSEMQPGSTEAIKQAAAEGLGLACLSRCAVQDLVTLGRLVIVHTTLP RLTRRFYRIQHRQKRLSGNLQRFAAHCDRLEVEPF >XOO2063 transcriptional regulator gntR family MSGSRFQSGDGVRRRLWRVGGGYGKRDNSPRSAFPAWPACARFAVDALFL LRASAAPTELIMNDIQWSDGAPIYRQLKERVIAMMLDGILKPGDALPSVR QVAADYQLNPITVSRAYQELADENLVEKRRGLGMFMTQEAAQKLRGSERE RFLTEEWPAVLERIQRLGLSIDDLLPQGKTP >XOO0268 transcriptional regulator asnC family MRCGAVFMQRHFPMISPHLSRMAAQRDCKSCVFRLQRRKIRASSFASAQH MDHPIALDRTDLRLLALLQAQGRTSNAELAVQVNLSASACLRRTQRLEAA GIIAGYGARLDARALGLGLQAFVRVQLEQHGQADIEHFAQGVRGWDEVVA CWALTGDMDYLLQVQVRDLEHFSRFLLDRLLNATGVSDVNSSFVLRMVKA PEGLPLSHLA >XOO2932 transcriptional regulator MKISLEALQILDAIDRRGSFAAAAKVLFKVPSTISYTVAKLEEDLGVQLF ERVGPKATPTQAGRELLREGRHLLRAAQELEVRVRRVASGWESDVAIGLD AVLPAALLQPQILDFYTVADSTRLRVLSESLSGGWEALLDRRVDLIVAAG EGPSGGGYVAEPIGTLRFVFAVASTHPLASAGVLGAAELAEHRAIAVADS ARRLLPRTVGLLSGRDVLTVPDMRTKLLLQLAGAGYGFLPEPYARGALQD GRLREVQVETHKPDETFYLAWRPGEEGEALGWWRRALRSEGLFDSWLHAL AATYRSVAAGQSPR >XOO1231 acoK, transcriptional regulator MQCARCYAISTTAPSATAVRQRDDSGRLLARLEHFHGLLVPLDGEREWFR YHPLFADFLQQLLDREHPGQSVQLHQRAARWFGEHQRLAEAVRHAACGAR RLRRSCSELHRACRQLAITADPRHACSARAATPFRPPHHPRHTGVEFHPG APASEAWRVQSCAAVAGASA >XOO1230 acoK, transcriptional regulator MDEAQARPLTLLLAPAGFGKTTLLAQWHAQLSAREPGAVAWLSLDEEDAD AARFLGHLALALQSAGADHALCAAVLHTRDQNPRETAMLLIRALRTAPRR ISVIVDDYDRLGSSLVDDVVLRLIEHSGGRLHLLLATRRVPNLPLARLDL QAQLSRIGSAHLALDDVEAQALLGPHVPASVVDELRRYTEGWPVALQHAR LWLEGDAQRQQEVAARFSGRSAQIAAYLAEQVVDDLDADTRDLLLRTSPL ERINATLADAVRQRDDSGRLLARLEHFHGLLVPLDGEREWFRYHPLFADF LQQLLDREHPGQSVQLHQRAARWFGEHQRLAEAVRHAACGARRLRRSCSE LHRACRQLAITADPRHACSARAATPFRPPHHPRLPCASATTAAACWHGWS ISTACWCRWMASANGSAITRCLPTSCSNCSTANIPDKACSCINAQHAGSA SISVWPKRCGMRHAARGDCGDLAASYIARAGSWQLLLTHGTHAVRALLRH FDHRTIRDTPALNFTQAHLHLKLGEFSHARLLLERLRDFPAALREPLQRD YTVMVALLRDRLDEICGNPHGLTQIAAQAGALDEDDHLGRGMLLCICATT AIAQGAFAVAEHYARNARAAMQRGGSDLGASQAMLSLGQSLFYRGQLRDA EACYRQALRWCARTPQLDRVLESAAQCLLAQLHYERGRHDDAADLLYPAL ELLEQHDGGMDVLAAGYGTALGLERLRDHSGRSALLLLEHIEQIAHGRKL ARLSELAAAWRLMLLLEHPGNAAIDVLIARTGGESGLAHTLRSSHRWHDR AAMGFALARWHRLAGRSSAALVILGQIEQACLANDNAWHLARTRARIALV LQQRGEPLAALPYLYSALEHVALTQSWQSIVELGLPAKAMLRSLRQHDPH TVGGSTRALTIQALLERLSDDDDPAGDIFSERELEVLAQLARGYSNKQIA RRLHLSENTVKFHLKNLYRKLDARSRESALAQAQAVQRGLLRGSEPHADQ AVATD >XOO1268 ahyR, transcriptional regulator AhyR/AsaR family MAKVLGFPCWLSLVGNHRYRGITMFEILASLGRDLQASQTVNSCLDRVFR DVCALGFQSLVYDYAPVPLSMEGALITPTVFMQRNAPGDMQHVWCEHGYY QHDPVQQRATRRNTPFVWSYRTDGDCAGVEYVGGQHRQVTRYLCDSGMGT GVTVPLHLPGGAFATFSAAIDAVAAEALRLAESQLLPFLLLAHAFQARAQ ELLDPQERRCHHIPLTRRERECLQYSAKGLTSKRIAAALNRSTATVNLHL NSAARKLGARNRVEAVVRGMHYRLLEP >XOO1425 algH, transcriptional regulator MSVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEY TLGEVLSQMGIDTDDEPLREQIVLSGGPVHPERGFVIHDDAREWDSSLEV GQGVFLTTSRDILEAMAAGNGPRNVLVALGCAGWGAGQLEFELGENSWLT APSDANVLFATALEDRWQTAAGRIGVDLFRLTDYSGHA >XOO0653 algR, transcriptional regulator protein MIALEEVAYFQADQKYTTVMTAAGEAVLRTPLRELLDVLDPQVFKQIHRS TIVNMKGSLKI >XOO4008 algR, two-component system regulatory protein MTATQVRVLIADDEPLARERLRMLLGEHPQVEVIGEAENGQQVVQQCEHL HPDLVLLDIAMPGVDGLGTARLLRQSQPPPAVVFCTAYDQHALSAFDAAA LDYLMKPVRPERLASALEKVATFLAGRAPGTAPRPVRTHLCARLRGSLRL IAIGDIRYLQAEEKYVIVHHTRGEDLIEESLKSLEDEFADHLVRIHRNCL VARDELVELRRSGDGQVHAVLRNVPQTLEVSRRCVASLRDQLRQL >XOO0651 algR, transcriptional regulator protein MRARCWRLSGSVCGGRRQQLRKRRGDQSRGGAPGRRAASRRTGRRRAIGD GKGTGRGASESAACAGRTALSLQHAGERARAGAHRSAACGDHDRRFDPVP APLAAERRRCHRHPARRTRTHPGVPGDPAHPHGHAARLAGGSAVRTACAS AAVDDVADAGGKRDQARAGSQARRRHRVDSGASPRRPCHAHRGRRWPGLQ HAQPGHRHRPEAPARAAEVDLCRQGDLCHRVQFPQRGGGHHQPAIAGAAG CCTLTAADAYRGCARPAGAGMSALRAVVAEDEALLRQSLLTLLAEVCPQL QIVGGCEDGASALETIATQQPDVAFLDIRMPGLTGIEVARAMRQVGPRSQ VVFVTAYDQYAIDAFEHGAVDYLLKPISHERLQAAWQRVQHAPLLASRMA RCWRPCCSVCRHARRRPVLRRRWPGSPPAAAARRA >XOO1849 algU, RNA polymerase sigma-H factor MQRRQRCIGAATLMRDGRTDRYELFFSMAVSLPDFGGLTGVRPDMAEVDT PQELDLELVRRVQRGESAAFDVLVRKYQHRIVALIGRYIADWSECQDVAQ DTFVRAYRAINSFRGDAQFYTWLHRIAVNTAKNHLVAHNHRPPSDDIEIS DAEHFDGATRLRDTDTPERELMRQELEQTVMRAVQALPEELRSAITLREV EGLSYEDIARKMDCPIGTVRSRIFRAREAIDIKLRPLLETESATRERYRV >XOO1369 ampR, transcriptional activator ampR family MPRPRLPLNALRAFEAAARHQNLTRAADELCVSQAALSHQIKALEQQLGT SVFHRLPRGVALTDEGAALAPVLGEAFDRIAATLERFADGRYCEVLSVGV VGTFATGWLLPRLAAFHAAHADIELRLSTHNNRVDLAGEGLDLAIRFGDG DWQGQVADAVMEAPVAPVCAPAMARVPLLRSYRLDEWPQWFRAANVTEVP ARGTMFDSSLTLASAAAAGIGVALLPLPMFRQDLDAGRLVCPFPITIDAG RYWLTRLRSRPESDAGRRLRDWLLAEQQINS >XOO4166 ampR, B-lactamase regulatory protein MLDESEAHHRAALEGVGVALGRVTRARLLLESGQLVALSTQRLKTSWSHY LVYPPRSSTHGGFLAFRAWLQAQA >XOO2895 avtA, valine-pyruvate aminotransferase MTTSFQISRRAQALTSSAIREILKVTERPEVISFAGGLPSPATFPVERMR AASDQVLRDAPQAALQYGPTEGFAPLREWVAARLSRDGASIRPSQVLITT GSQQGLDLLGKLFIDEGSKVLVETPSYLGALQAFSLFQPGFVGMPSDEDG VVVDALDPALLADARFLYCLPNFQNPTGRRLPLARRQALVARAAEAGVPI VEDDPYGELYYSGQPLPSLLSMQPDGVIYMGSFSKVLAPGLRLGYVVAPE AVLGKLIQAKQAADLHTPSFTQRVVYQTLQDDFLDTHIPQIRALYARQCS LMLEALDRHFPAQVQWNRPEGGMFLWVTLPPGLDGTALLARAIARNVAFV PGAPFFATLPQTNTLRLSFVTVPGEKIDAGIQVLGELLREALDALAGQGA >XOO1559 baeR, two-component system regulatory protein MRTARVPRRRLKDVAFIGSLRRKSGSGGQAHAVERLKQRNTAQHALTCGV QVIEFGLGDARTLGQQRAAVFQTGIHARVHSRKTQLLAFDLRARARLGLR QSGVRVERVGDLTKCRLDYLLVGDDIGAFAHLRQLQIGAVTATIEQRQIQ LRHEAPQAVACGKQTVQSVAGSAHAAAQGDRRKKRRTRRADIGIGRAQLQ LGLLDVRALQQQRRIQGAPGTGRRISSDQTLQIAGYRRAVVADQQLQRTH RRSVIVVALQGRHMGLIGLTALRIALVARNQPHLIVPLGNGKQRSAVGIE RLQLLQRLRSGALGGVGTQHLSNQGTTRGIAAVGAGQVTLACGLGHRLQL AKEIHFEIADPGIGNHQVLLVPRIQRRVVEMLPELLCADGERRQSRRLRD TGVRTRLLYLQRSAADIAVVRQRTFNQRPQVAVWCEALQERARLFVQSDG GRRVGVGPIGCRRGCSLRTAERGRHADRRALVGRRERAPSRQHRTGGNQA HARPTMRNNLWNHDVGAQSQSRPTSSTRSVQVVFGNYPDLIETTGQHAMT GKKVLLVEDDADSASILEAYLRRDGFDVAVAGDGERAIQLHRQWAPDLVL LDVMLPKLSGIEVLSAIRRASDTPVIMVTAIGDEPEKLGALRYGADDYVV KPYSPKEVVARVHAVLRRSVAVRAPGEPLQHGRLSVDPAAVVASVQGENG DSVALDLTPTEFNLLALLLKTPCKAFTRSELLDACLPDSDALERVVDSHI HNLRRKLEVHGITGVLVTVRAVGYRFQ >XOO0429 baf, transcriptional regulator MSEWLFDLGNSRFKYAPLHGNRAGQVQAWAHGAEAMDAAALAALPSGQIA HVASVAAPALTQRMIACLQERFTQVRIVRTAAECAGIRIAYADPSRFGVD RFLALLGARGDAPVLVAGVGTALTIDVLGADGLHHGGCIAASPTTMREAL HARAVQLPASGGDYVELAIDTDDALTSGCDGAAVALIERSLQHAQRSLGA PVRLLVHGGGAPPLLPLLPGATFRAALVLDGLATWATAAASP >XOO1190 blaI, transcriptional regulator blaI family MTSNSFTRVIDKNYGCNRMSISDAEAVVMQVLWDGAPREAEEVIAALAHT GWAEPTIKTLLNRLLSKGAVAAEKHGRKYHYAPLLAREQWVQQQSEGLLQ RLFGGRVAPLVAHFSERGKLSASDIAELKRLLKELDDAP >XOO1101 cebR, transcriptional regulator MPRQRKHQGVPGLRSRRACRRRRASRRSSCGGLAHRRASDRHRANNPPLV RTDYTLAFPQRAAMAKPSERTTLTARPQMADIARMAGVSESTVSRALAGS PVVAERTRAYIKQIAADAGYQVDPVARSLRAKRSNTVSVAVPMMHALDQP LSDPFLMTMLALLAEELTGRGYSMLLSKLDRHQDGWVEQLARGSRSHGVI VLGQSFEHAALDAAARDGLPMAVWGSRIDGQSYISVGSDNFQGGVLATEH LIASGRQRIAFLGDDQLPEVAPRFAGYRHALERHGLEFDMRLHARSHFVS EDAYRLTRAMLKKADPPDGLFAASDVIAVGAIRALFEAGHRVPQDISLVG FDDIPLAAYSQPPLTTVQQDLGLAARLLVDRLLTLIAGEPVQSIEMPVKL VVRESA >XOO3763 colR, two-component system regulatory protein MASRSTTRRTAWDGYRLAAENSYDVVVLDLMLPRLDGIEVCRRLRNDARK STPVLMLTARDTLDDKLTGLGFGADDYLTKPFAIQELEARLRALIRRERR QVGSEVLKVADLVLDPVSMRATRAGTELQLSPIGLRLLTILMRESPRVVT RQEIEREIWGNGLPDSDTLRSHLYNLRKIIDKPFDRPLLHTVQSAGYRIA DIAQPMA >XOO3535 colR, two-component system regulatory protein MREHTILQVGRKFVEAERAACRVAAQASQLRGGFERNRWEGRTGDTGRVW LASVRMRTPCLLGRPGTPLMRLLVIEDNRNMVANLFDYFEARGYTLDAAP DGITGLHLATTHHYDALILDWMMPRMDGPEVLRRLREQHQSELPVIMLTA RDELPDKIAGFRAGADDYLTKPFALPELEVRIEALLARAHGRRRGKLLQV ADLRLDLATLEATRAGQVLHLYPACRKLLEVLMQASPAAVTRQRLEQSLW DDDPPDGDMLRSHIYELRRSVDGPFAEKLIHTLPRLGYRLAQLYAAEAPG AGDSSDV >XOO1208 colR, two-component system regulatory protein MWVETKFLGASAKNSLTNEVPVRILVIEDNSDIAANLGDYLEDRGHTVDF AADGVTGLHLAVVHEFDAIVLDLNLPGMDGIEVCRKLRNEARKQTPVLML TARDSLDNKLAGFDSGADDYLIKPFALQEVEVRLNALSRRGKGVHTRVLE TGDLEYNLDTLEVRRRGKLLQLNPTALKILQALMEASPAVVTRQELETRV WGEELPDSDSLRVHIHGLRAVVDKPFDVAMIQTRHGIGYRIASPDA >XOO2721 cspA, major cold shock protein MFARVTVNRGLVQPDRYRSCFIVPLYQRLQLSLSSGFSDAAIYPSIVSGV SKMSERMNGIVKWFNDAKGFGFITPESGPDLFVHFRAIQGTGFKSLQEGQ KVTFVAVQGQKGMQADQVQAV >XOO1510 cspA, major cold shock protein MSNIERENGLVKWFNDAKGFGFISRENGEDVFVHFRAIQIQGFKSLKEGQ KVSFTVVQGQKGLQADAVQVV >XOO3407 cysB, transcriptional regulator lysR family MTLTQLRYLVAIADAELNITLAAGRVHATQPGLSKQLKQLEDELGFLLFV RKGRSLDGATPAGVEVIERARAVLSEVNNIRTYAANQRRESQGQLTLTTT HTQARFVLPPAVAQIKNAYPQVSVHLQQAAESAALDLLGQGDADIAVVST AGGEPSAGIAVPLYRWRRLVVVPRGHALDHPRTAPEMHALSEHPLISYDS STRPGSSLQRAFAQMGLEPSIALTALDADLIKTYVRAGLGVGLVAEMAVN AFDKDLRAWPAPAPIAECIAWAVLPRDRVLRDYALDLVHVLAPQIDKRDL RRVLDGNQAPNWPLPPTWESLTQTITS >XOO2716 dbpA, ATP-dependent RNA helicase MGIGKSTGCCSDESRIPNPGLKCAMNEFSALPLSPALAPGIDALGYTVLT PVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVL CPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDPHVV VGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDK HRQSLLFSATFPDIIRTLAREILKDPIEITVEGADNAPEIDQQFFEVDPT YRQKAVAGLLLRFTPESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDME QRDRDEVLVRFVNRSCNVLVASDVAARGLDVEDLSAVVNYELPTDTETYR HRIGRTARAGKHGLALSLVAPRETARAQALEAEQGQPLKWSRAPLATARP AQLPQAAMTTLRIDGGKTDKLRAGDILGALTGEAGLSGAAIGKIAIYPTR SYVAIARAQVAKALAHLHAGKIKGRRFRVSKL >XOO1550 deaD, ATP-dependent RNA helicase MTQESSAPLLFADLGLSGAVMRAVANVGYESPSPIQAATIPALLAGRDVL GQAQTGTGKTAAFALPVLSNADLNQVKPQALVLAPTRELAIQVAEAFQKY AEAIPGFRVLPVYGGQPYAQQLSALKRGVHVVVGTPGRVIDHLDRGTLDL SQLKTLVLDEADEMLRMGFIDDVEAVLKKLPEKRQVALFSATMPPAIRRI AQTYLKDPAEVIIAAKTTTSANIRQRYWWVSGLHKLDALTRILEVEPFDG MIIFARTKAGTEELAQKLQARGLAAAAINGDMQQAAREKTIAQLKDGKLD ILVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRTGDAIL FVTLREKGMLRSIERATRQPIEEMQLPSVDAVNDTRVARFMTRITETLAG GQIDMYRDLLQRYEAENNVPAIDIAAAMAKLLQGDAPFLLTPPVRGARED AAPRERHQRADRGDRPRFEPKFERGPRADGERAPRPPRGDDAGGERPRRD PVAPRGEPELGMESYRIEVGHSHGVKPANIVGAIANEAGLESRYIGRIDI QDDYSILDLPADMPRELLTHLKKVWVSGQQLNMRKLEEGEAAASPAKPRF PRGGKPSGRSNGPVRPMDRAGAPHRKGPPKPRGE >XOO2764 dnrO, repressor MLQGGRSWSGVALAERLDIHPRSLRRDIERLRALGYSVHAAPGSGGGDRL GQGAAALPLLFERRRSADRGSRPARRRAAAPAVRGMGAAAARVMARLDPL LPRRSGQRASAAHAAMASMPAAEAEPLVDAALLAQLAAACRDRVTLRLDY RRHSGAAITRSVEPTLRVNDGRRWYLLVWDCERQDWRSLRPARIDRAAAT GAQFAPRSVPEEPLQLLCKAVGEAPFPCRARFRLAGTVEILAARIPPWLG ALEADGPAHCWLGLGAPSMPALAANLLPLDLPFDAIAPDQARAALTQALN ALCAQLARKSGQQTLRAVVRWA >XOO0548 fis, DNA-binding protein MNAAPSRPDSSRGAPKSPLREHVAQSVRRYLRDLDGSDADDVYEIVLREM EIPLFVEVLNHCEGNQSRAAAMLGIHRATLRKKLKEYGMT >XOO4566 fldY, transcriptional regulator MQPTPEPNLRHLYALAVVHQAGSINAAAPQVNLSQPALTQAVARLEQQLG VRLFDRHPGGMLATEATQLLVPRIERALTHLGRGIGVARRALRLPARPGL ERRVSLGQLQALVAVDVAGSYSLAAVRAGVSQPAIYRAVQSLADVIEVPL TVRRGKTMQPTPVAVRLLRQVRLALAELRAGLDDVATLRSQHAGRLTLGV MPLARAILLPQVLARFARAHPGASVQVVEGPYDELLAHLREGGLDLLIGA LRDPLPVRDVLQEPLFDDEPVIVARSGHPLAGQAYAFAQLLDYPWVIAAA GTPVRARWEQLFRGHQLEPPPLRIECGAELTVRGLLLEDDWLTLMSRDQF VFERLAGLLAEIGSAGPQLRRQIGMTIRSDWYPTRAQSAFVQTLRQVCAE RVQTADAQGGPFRYCTQASIATPLRLCAAKSESGS >XOO2566 flgM, flagellar protein MTQKIEGNLPTAATLRTAATSSKIASAGEDGASPVAVTPPTDSVKLTGEA TNLQNLQRELSQSSAIDTGRVQAVKDALQNGSYSINPDAIASRMMDLNQQ LAG >XOO2621 fliA, RNA polymerase sigma factor FliA MNTTAAAQYRAVQRNNADNVVTQHADLVRRIAHHLAARLPASVEVDDLIQ AGMIGLIEASRSYDSEQGASFETYASIRIRGSMIDEIRRGDWVPRSVHRR ARDAAAAVRKIEQNTGRAAAAAEVAAAMEMPLPDYLRLMEDAARGQVLSL ESRIEDHGELDTTAKGGPNPQQMMERSEFGRELGKAIGQLPEREQLVLSL YYEQELNLKEIGAVLGVSESRVCQIHGQAVVRLRGRLKVFELADAGVEID E >XOO3077 gacA, transcriptional regulator luxR/uhpA family MHRACPELFTEIGCTSQQLARKTRMTIRVFLIDDHALVRTGMKMILSKEV DVCVVGEAESGEAALPQIRQLKPDIVLCDLHLPGVSGLEITERIVKGDYG TRVIIVSVLEDGPLPKRLLEAGASGYVGKGGDAHELLRAVREVALGRRYL GNTIAQNLALSNLEGGGSPFDALSPRELEVALLLTQGLRQEDIAKRLNLS AKTINTHKARLFEKVGIQDNIALARLANQYGLTDPSRVL >XOO2916 gbpR, galactose-binding protein regulator MLQMKFSAYSIPPKNTPPQPHAMATSGIPWFNAARLKTRQLLLLLHLHEQ RSVLRAAEAASMTQPAASKLLAEMEDMLGVKLFERHARGVEPTWYGHVLI RRARAAMSEIGRAQEEIAALRAGCMGQASIGTVVNPGTNLVPQAIAEVKR EFPDILVRVEMDYSRPLVAKLLDGQLDIVIGRILGPEGVGELAFEPLADE PHSVIARAGHPLASRAGLQHADLVRHGWILPPADSVLRARLDSMFMEHGV QAPTNAIETSSLPVTSTLLRGTDMLTALPVESVAPLIQAKLLTVLPIKLG VRMESFGIIRRRDYNLPPGAERILQALRTTARRLYPGLRAPESSL >XOO2886 greA, transcriptional elongation factor MVAAGTAQGAGSMRAPMTSKGALRLREELEQLKSVKRPEVINAIAEARAH GDLKENAEYHAAREQQSFIEGRIKQLEGELSHAEIIDITKLSAGNKIVFG ATVTLADTETDEEKRYQIVGDLEADIKMGLIAISSPLARALIGKLEGDSV TIDAPAGQREYEVVSVAYLD >XOO3271 greB, transcription elongation factor and transcript cleavage MRTHVMRASIAAPPFESACPMSRWRPPAEKSTALITPEGHARLKAELDDL WRVRRPEVVRALAAAAAEGDRSENAEYTYRKKQLGEIDRRVRYLSKRLEA LRVVDTAPTDPNAVFFGAQVDLEDADSGELLRYRIVGPDETDAGRGWISI DSPLARALLKKRVDDEFDAHLPAGKHTFVVVSVDYTSQ >XOO1379 hrpG, HrpG MKLFLVAMVNSIGPALPDAPPTTNWSDDASISPCGFCPGVGRQASASGPR VVCARPRDVHLMNDPCPLAHGSAFLLTQDARLASQVNASIAPLSRNVSVF SDELELLRSLRHSPCELLVFDASCVASDESSLLAWQRCHSGHPTPLIVLG RFDCANDILDWYRAGAQEVLALPFNPHELQVRAALALSPVAHACPETQQL SVGPYQLLRDENTVYLHGKPIVLTAREFSIAWLLFSSPGVCFRRCQLAKA VWGSHTEFTDRTMEQHIYKLRKKLQLGNHNGAVRIRTVYSHGYKLELALQ DKDATTMSKAVSLSLSPAHRTAAC >XOO1380 hrpXct, HrpX protein MTNSIGSAAYNRVRRRARRLLSFAPPPKRETGMILSTYFAAISALSYAER LPTYTSRMLVGAWPQGLQHLQQRRDGQGAADGADDEVSLFGASGDALLIL EYQEEAEDAYRQALKAMRGQQRQLRLLSCRNTAWLMLSQRRLSAALNCFA QLAMDRETPPSLCGESLLGKALTHFHLGQSTLALQTLERANEVLAELESG ASDWLRVATALRLDMIAQLRIRRSDRMVDHVFWQATLRQEDAAHAFEPSD LRACIADLAESMPVLAQRMRHVRNLLRIVGGDTFGFDAQIDALPAAATGC PPCARQDAQVELALAALAVGRADLAERALAGAGRHHAPRWNLEFEYCQAK ISQALGRTEQALLLYNRYALDAVQCLRSEVQAPRLLESGTPAHVSDDISA RLPAKYRRAYSYMITNAHRSDLSINEVAAQIGVTGRALQQAFKSATGLSP TQVLRRYRMQSIRDELLAEGGCGSVLQAASRWGVGSRSALAKGYRQHFNE APMETLQR >XOO2395 hutC, histidine utilization repressor MTAPPPIAPGTLHQRIRQDLEQRIHSGDWPPGHRVPPEHELMAQYGCSRM TVNKVLGLLADAGMIERRRRTGSFVARQHPYLEQVALSIPDIEVEMTTRG HVYRFALLSRQLRNVRQRVPQERALGSTGKLLALQSVHLADGRPFALEQR VIDITTVPEALAQPFTEMAPGSWLLRNVPWTRAEHRISAISADAAQARQL QADDGAACLVIDRHTWRGDQPVTYVRQMFLGGSYDLVARFAPGMR >XOO4263 icfG, IcfG protein MRNRSPSLPQQTSVAARMPWRSSLRMRVLLAATAVLVVLLAALGTVFYLG ERAELVEAARTEVDGLTEQTAGSLAALLDSVQVSGHMLAASSSGVGLQPF NLRALLLATLTGDPDIAAARLIIQPRTQKAGDSGFVWYVHRRGTRVVEKS ALELGYDYRAMPWYLRTQREGRAWWSEPSLDTDGGDLYTSYNLPLRRPGD APDTASVGMVSVDLPLQHLRKIIDQLPRDIGIQPMLLSPEGMLVLGPGPA LNLHYSFNTYVRRSRPDLRPLQRAVAAGQPISFTHTSPDGERFLTHSAAV GRSGWTFVLSASEGYVLAGLNWLAAWVALAALLGAVMWWWLMRQITRKLT RPIDELTDTAEHFRRGEFEYPLQHIERDDEVGVMARAFDSARDAIRHHIA EIGEMTAARERMHSELQIAREIQKAMLPSGRTFERASSHLETCAWLEPAK AVGGDFYHFVETEPGLLWFVVGDVSDKGVPAALFMARAVSVLEIAARRYK RPDTILIAASRRLAENNETCMFATVLCGLINVVSGDYWLASAGHEPPLLI DIDGKARPLPLETGALLGIEPQESYPVLQGRMRAGQTMLGYTDGVTEAMD EHGARYGLERLLAALRPHRSAAAQCKAVIANVARFTGKADPYDDITLLAI RLRQEHAGRNVAGEATTR >XOO0338 kdgR, transcriptional regulator MLCNRASVLRRPAPCKYKIFVYICTDTRHLTPTPRCLYPGAPHLARTCKR MSTEHAKYRAPALDKGLDILELLARDAHPMSMGAISQGVGRSRGEIFRML QVLEERGYLMRDADGDYVLSNRLFMLGMQQPQVQNVTEAALPVMRRLADA ICQPCHLVAPSGDQIVVIAQMDVPSDLGLVVRPGHRRPLAHSTSGLVLFA FQQPDVQARWLNALDTSDVAYDRARFLEDAQQTRNDGYAMHASEAVVGVV DLTAPILQDGSATYTLTVPFIERRPELVNPQAALQALCAATAEISEALMY HPPRALGH >XOO3842 kdpE, two-component system regulatory protein MVTAPQFALRCRCSFPPRHLAPMPTDLTAIPPARVLIVDDEPQIRRFLDI SLRAQGYRVLQAGTAEEGMALLAGQGAELVVLDIGLPDRDGHEMLREIRQ WSNVPVIMLTVRAGETEKVAALDAGANDYVTKPFGVQELMARIRVLLRQA GAGSTVEESVFDDGRLHIHLGLREVTLNGEAVPLSRKEYALLALLLKHAG RVVTQPQLLRELWGPTHEEDTHYLRILVGKLRQKLQDDAAAPHYIVTEPG VGLRFIGVTR >XOO2942 lexA, LexA MRKYSLVVIILNMDLTDTQQAILALIAERIDADGVPPSQTEIARAFGFKG VRAAQYHLEALEQAGAIRRVPGQARGIRLAGQGGQTRAAAVSEPVRDDVL RLPVLGRVAAGLPIGADIGSDDFVVLDRVFFSPSPDYLLKVQGDSMRDEG IFNGDLIGVHRTRDARSGQIVVARIDEEITVKLLKIGKDRIRLLPRNPDY APIEVLPDQDFAIEGLYCGLLRPNR >XOO3442 lexA, LexA repressor MPPLTPQRAAVLAFLQEQAQAGVSPSLAEIAQAFGFASRNAAQKHVQALA EAGLIELLPNQKRGIRVPGGAGRDALLNLPVLGRVAAGVPIGADIGLERQ LWLDRALFSLRPDYLLQVQGDSMIDDGILDGDLVGVHRSKEARDGQIVVA RVDGEITIKRLERGTERIRLLPRNRAHAPIVVAADADFAIEGLYCGLIRQ G >XOO0692 lrp, leucine responsive regulatory protein MTSRARELDKIDRKILRILQQEERISFTELGERVGLSTTPCTERVRQLER DGAITGYYARLDPHYLKASLLVFVEISLAYKSGDIFEQFRRTALKLPNVL ECHLVSGDFDYLLKARISEMASYRKLLGSTVLTMPHVRESKSYIVMEEVK ETLALPIAD >XOO4336 metR, transcriptional regulator metE/metH family MLNLTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLAVASRVLP QLDLAEERLGQFAQGERGALRIGMECHPCYQWLLKLVAPYLATWPDVDVD VKQKFQFGGIGALFGYEIDLLVTPDPLFKPGLTFEPVFDYEQVLVVAKSH ALASATYVKPQQLTREVLISYPVDLERLDIYSQFLLPAGVTPRRHKAIET TDIMMQMVASGRGVAAMPRWLVEEYAARMDVAPVRLGARGIPKQIYLGAR ATDIAIDYLRAFIELARAPASASAYTQGPN >XOO1472 mfd, transcription-repair coupling factor MPSPTFPSPPLPRSGQLRAYWRAPSSPTALAWSIARAAEAHAGPLLVIAR DNQSAHQIEADLHALLGEHSALPVVPFPDWETLPYDQFSPHPEIISQRLA ALHRLPGLSKGVVIVPVQTLLQQLAPLSYIVGGSFDLIVGQRLDLGAEKR RLESAGYRNVPQVMDPGDFAVRGGLLDVFPMGADTPLRVELLDEDIDSIR VFDPESQRSLDKVEAVKMLPGREVPMDDASVERVLACLRERFDVDTRRSA LYQDLKSGLAPSGIEYYLPMFFAKTATLFDYLDKRVLPVIATGVSTAADT FWAQAQNRYEQRRHDIERPLLPPDELYQSPDALRERLNKLARIEVWASDH ARIEEAAPLGDQPLPPLPVAAKDAPAGQALASFLSHYPGRVLVAADSAGR REALMEVLAAAQLKPEVVADVPAFLAGTLRFGMTVAPLEDGFALDQPQIA LLTERQLFPERANQPRRTRRVGREPEAIIRDLGELSEGAPIVHEDHGVGR YRGLIVLDAGGMPGEFLEIEYAKGDRLYVPVAQLHLISRYSGASAETAPL HSLGGEQWTKAKRKAAEKVRDVAAELLEIQARRRARAGLALQVDRAMYEP FAAGFPFEETADQLAAIDATLRDLGSSQPMDRVVCGDVGFGKTEVAVRAA FAAASAGKQVAVLVPTTLLAEQHYRNFRDRFADYPMKVEVLSRFKSTKEI KAELEKVASGDIDVIIGTHRLLQPDVKFKDLGLVVVDEEQRFGVRQKEAL KAMRANVHLLTLTATPIPRTLNMAMAGLRDLSIIATPPPNRLAVQTFITA WDNTLLREAFQRELSRGGQLYFLHNDVESIVRMQRDLSELVPEARIGIAH GQMPERELERVMLDFQKQRFNVLLSTTIIESGIDIPNANTIIINRADRFG LAQLHQLRGRVGRSHHRAYAYLVVPDRRAMTSDAEKRLEAIASMDELGAG FTLATHDLEIRGAGELLGEDQSGQMAEVGFSLYTELLERAVRSIRQGKLP DLDAGEEVRGADVELHVAALIPEDYLPDVHTRLTLYKRISSARDPEALRE LQVEMIDRFGLLPDPVKHLFAIAALKLQANALGVRKLDLGENGGRLVFEA KPTIDPMTIIQMIQKQPKIYTMDGPDKLRIKLPMPEGADRFNAARGLLAA LAPG >XOO3219 nusA, N utilization substance protein A MSKELLLVVDAVANEKGVPREVIFDAIEAALASAAKKRYPDQDVLARVTI DHKDGTYETYRRWEVVADDVVMESPDRQVRLMDAIDEADGVDVGDYIEEQ IENPDFGRIAAQAAKQVIVQRVREAERQQVVDAWKDRVGELITGVVKRAE RGNIFVDLGGNAEAFIPKDKGIPRDVLRPGDRVRGYLAEVRSEPRGPQLF ISRAAPEFMIELFKLEVPEVGQGLVEINACARDPGDRAKIAVIAHDARTD PIGACIGMRGSRVQAVSNELNGERVDIVLWNENPANFVINAMAPAEVQSI IVDEDKHSMDLAVAEDRLAQAIGKGGQNVRLASRLTGWQLNVMTADQVAA KSEAEQAAARKLFMDRLEVDEEISAILVSEGFNTVEEIAYVPVGELLAVE GFDEDIVEELRARARDALLNAALAEEEGLEGTQPTEDLLALEGMDEETAV ALAEHGVRTSEDLSDLAADEIVDFGIEGLTQERAAALILAARAEEIARLE RGE >XOO3851 nusB, transcription termination factor NusB MSKPGGHPRHGRRDGIDPVLRSRARRRALQAVYAWQISGGFAKQVIAQFA HEQAHEVADLAYFENLVEGVLTNRAELDTALTPYLDRGVEEVDAIERAVL RLAAYELLYRQDVPYRVVINEAIETAKRFGSEHGHTYVNGVLDRAAVEWR KVESGA >XOO3597 nusG, transcription antitermination factor MSSRSSRSGSWLVEENQAVKRWYVVHAYSGFEKSVAQALRDRIARTEMED RFGDVLVPTEEVIEMRAGQKRRSERKFFPGYVLVQIETHEEAGIPRIDNE SWHLVKETSRVMGFIGGTADRPLPIRDEEADAILQRVQDGVEKPRPKVLF EPGQMVRVTEGPFNDFNGVVEEVNYEKSRLRVAVLIFGRSTPVELEFGQV EKG >XOO3647 oxyR, oxidative stress transcriptional regulator MNLRDLKYLVALADHKHFGRAATACFVSQPTLSTQIKKLEDELGVSLVER APRKVMLTPAGREAALRARSIVAEVEQMKEAARRSQDPEAGTVRLGIFPT LAPYLLPHVVPRIRERFPRLELLLIEEKSDQLMHQLREGRLDAALLALPL QDDQLHAEFLFEEPFVLAVPEGHPLSRHDNMTLDALSEQRLLLLGDGHCL REQALDVCHLAGALEKSEFQATSLETLRQMVAANVGVTLLPLLAVKPPVA RSDNIRLIRFRDDKQPSRRIGMAWRRSSAMTAFLDQLSQLFKELPDSLFT LDQPAAGPKAVAA >XOO2038 oxyR, hydrogen peroxide-inducible genes activator MSQQIRALEAIIGTPLFERGAQAILTPLGRDLLDRARSILLDVTDLEEVR ATAADTLVGTIRPGVSPTLGAYLMPSLVARLHREHAALRVHVREGLPTAL ASSGLHDLVLAQLPVPGRGLHSERLLRELLHVTMAADHPLRTKACITPAD LRGANLLTLMPDYRLAEQVAAIAMEVGANVLRDYGGYRSSRGSFPVYEDK S >XOO2422 paiB, transcriptional regulator protein Pai2 MRDEDALGALIGRMSAHFEQCVGSGWLFEMERDRHPKPLRGLVGFRLVPS RIELTFELSQNHPAGNIAALSDALARQASADSHAVATLMCDTLRARDGAA >XOO2421 paiB, transcriptional regulator protein Pai2 MDALRAFAQTDLALLDWLFARDAFVALISQGEDGHPAISHLPVLYQRDGQ HVVIEGHWARPNPQARTPGDAVIVLQGPHAYVSPTWYLDKDAAARVPTWN DAVAHLH >XOO0504 parB, chromosome partitioning protein MNKPMPAKKRGLGRGLEALLGPKGAAAAAAPSAASEDALQPGDSLRQLPV TQLQPGKYQPRREMDEVKLSELAESIKAQGVIQPIVARALAPGQFEIVAG ERRWRASQLAGLTEVPVVVRELDDRTVIAMALIENIQREDLNPLEEAQAL QRLIDEFSLTHAEAAGAVGRSRASVSNLLRLLELPVAIRVLLETRRLEMG HARALLTLAPELASKLAQEAADQGWSVREVEHRAQQFAAGKVPSALRKGK PAPVAPQADIASLETELSESLGTKVVFNHGRGGKGKLVIHYTDLDTLDGV LERLRMQRS >XOO3731 pcaQ, transcriptional regulator MPRYPTSQRKAHPMTMSSVFFEHRIKVRHLRVIEALDRQKSLLRASRVLN VTQPALTRALQEIEEIVGAPLFERHSRGVRPNAMGEVLVQTAHVVLGQLR RAQDNFEGLLQDDALTITVGALPVAASGLLPAVLAALYRTEPTLRVRLLH GRTDELLPKLAGNEIDLVVGRLYPLARYDALIRKVLYQDPIALVARSDHP LFANGPVRIAEAAAYRQVLPTLSQHVERDVAQVMREHGLATRDQLRSSSA SFTREILLGTDSIAVMPSMMVAGDIARGELRAFQLQQASQARAGGVIYRD GAAIHKPGVRLLMRELENQLALMAEQGAVCVDDLIGEDHVLLDESA >XOO0488 pcaR, transcriptional regulator MSRISLETGISRAAVRRVLHTLAKLGYVGEQGRDYVLLPRVLGIGGAYAA SSSMTAAAQPVLDGLRDQLHESCSLGVLDGDDLLYVARSETVRIMSIGLR PGTRLPAYCTSMGRVLLAALPADTLQAYLERTTLRPPTDRTVTQAAALLE VLARTRRGGMCLTDQELEIGLRSIAVPVRNLRGEVIAALNVGAQAGRVSL QTMQTQLLEPLKQAAQRLGTLLS >XOO3666 phoB, two-component system regulatory protein MQKRILIVDDEPAIRDMVAFALRKGEFEPIHAGDAREAQTAIADRVPDLI LLDWMLPGTSGLDLARRWRKEQLTRDIPIIMLTARGEENDRVGGLEAGVD DYVVKPFSARELLARIRAVMRRTREDDEDGSVAVGRLRIDGAAHRVFAGD APVPIGPTEYRLLHFFMTHPERVYTRTQLLDHVWGGSVYVEERTIDVHIR RLRKTLEPFGLENMVQTVRGSGYRFSSAT >XOO0423 phoP, two-component system regulatory protein MRILLVEDEAPLRETLAARLKREGFAVDAAQDGEEGLYMGREVPFDVGII DLGLPKMSGMELIKALRDEGKKFPVLILTARSSWQDKVEGLKQGADDYLV KPFHVEELLARVNALLRRAAGWSKPTLECGPVALDLAAQTVSVNGANVDL TSYEYKVLEYLMMHAGELVSKADLTEHIYQQDFDRDSNVLEVFIGRLRKK LDPDGELKPIETVRGRGYRFAIPRTEG >XOO0891 prpR, propionate catabolism regulatory protein MPAEEGDEGVMAVPWVEYRCRRKHRANHTPLILLDLAAPDVASAQRLIHY ETSLKRGNSMRSPATPETAGAALPVIWTVSVSRLTGLLADVIPEFDQRAR IEQINLGFAEAVEVIGLRLRRERCDALVAGGSNAAYLRSRLALPFAHIQA TGFDLMEALARARRIAPRIGVVTHASDVPSFRAFQHSFDLDIEHRRFVTA EDARDCIADLRASGIQVIVGTGMAIDFAEQAGLPGVLLYSADSVRQALEQ AIALGAAPSTDDLAGRSATRRARRADALLGEDSAMLQVRELVQLYAPHAG TVLISGETGTGKELVARQLHAGSRRRGRFVAINCGAISESLLEAELFGYS DGAFTGARRGGHTGLIEAAQDGTLFLDEIGELPMALQTRLLRVLEEHEVL RVGATVPVAVDVRVVAASLQELQQLVEQGRFRRDLFYRLAALRIALPPLR SRHDEIALLLAHYFQQLGNIASPLSPAALQRLQQHTWPGNVRELRNLVER LCIHWKSQPHDSLSLEQLERWTPELFDTHFGNREAPRELADLATSRLQVT ATAVRAALDRANGNRALAAQALGVSRTTLWRWMQAQASART >XOO0448 prtI, ECF sigma factor MDALDDDQLRAMLPALRRFARSLSGDPASADDLVQATLERALRRWRTRHT ADALQPWLFAILYRQFLDGQRRVARWQRVVGLFAPQQPSQSASAEQVHDG RAMLARLALLPPEQRALLLLVSVEGFSDRQVADTLGIPISTVISRLSRAR ERLRAVNEGHVNHAPASRILK >XOO0449 prtR, transmembrane regulator protein prtR MTIAPPDEHALHAYVDGRLAPQQHAAVAAWLQAHPAPAARVAGWLEARCR SATCRACRPCTGDGRHALTPAAIRRGLQQRRRAVFAVAASCVLALGLGTG LGWQLHASRVASQRVPMAAAVAAYRLFADAGTQQGVALDVQRRAELQPWL RTYFGNAGVVPDLRAQGHTLRGGQLLFMLEGAAAMLVYSVPIARIGLYLR PRSGPMPTGERRDGRLLAQYWAEGDTAFALIGPATQTRMRTIAPLLRNQG >XOO1151 recG, ATP-dependent DNA helicase MPRARVVTPSLAVAGQAPLSSLPGVGPKVADKFAARGILSVQDLWLHLPL RYEDRTRLTTIAQLQSGVPAQIEGRVDAVERGFRFRPVLRVAVSDASHGT LVLRFFHFRAAQVAQFAVGTRVRVFGTPKPGQNGWEIVHPSYRVLAPDED AGLGDSLDPVYPVLEGVGPATLRKLIGQALERLPPEAALELLPPHWLQDE QLPSLRAALLTMHRPPVGTDPQQLLAGGHPAQQRLAIEELLAHQLSLRRQ RIALQRFHAPSLPGNGTLVQQLRRALPFQLTGAQQRVFEQIARDLAQSWP MLRLVQGDVGSGKTVVAALAAMLAVEQGKQVALAAPTELLAEQHLNNLRD WLEPLGIRIVWLAGKVTGKARAAAMADVASGQAQVVVGTHALMQEAVVFH DLALAIIDEQHRFGVHQRLALRDKGAAAGSVPHQLVMTATPIPRTLAMST YADLDVSAIDELPPGRTPVQTIVLSAERRPELVERIRAACAEGRQAYWVC TLIEESEEPEKGARGQHGGPPRIEAQAAEVTFEALSAQLPGVRVALVHGR MKPAEKQQAMLDFKQGRSDLLVATTVIEVGVDVPNASLMIIENAERLGLA QLHQLRGRVGRGAAASSCVLLYQAPLSMMARQRLETMRQTNDGFVIAEKD LELRGPGELLGTRQTGLASFRIADLARDAGLLPRVQVLAERLLEEVPEIA DRVVARWIGGAVRYAAA >XOO2227 regR, two-component system regulatory protein MTSPPIRTGLLVDDDTLYLRTLQRSLARRGVQTLTATDAASALSTARSAL PDFALIDLKLGHDSGLRLIQPLREIRADMRILLVTGYASIATAVEAIKLG ADDYLPKPANIPTIMRALGEEDDDLPEPDEEETAQEMMTPLSRLQWEHIQ QALHETGGNVSAAARLLGMHRRSLQRKLTKRPSPGPLR >XOO1736 relA, ATP:GTP 3'-pyrophosphotranferase MPGEPGISTRPFSHCERGTTTRCGEGDAHVTVVISHLLVPATVSTVVTSS SFDRLQALLQRPAVASISPALREALARAWQELPPAQTDNVPWALLGDTLD ALALLAADEATLIAALLFDLPALRGAVTDLPWQPAERRVAVEGLLDGLDA ADQVWALHAGREAGRNSEGLRRLLLSIIHDLRVVPILLARQLSRMRVADR LSKEQRHALAQLTRDIHAPLANRLGIWQVKWELEDLAFRHLEPDTYRRIA REVDETRVARERYLEAVKRTLSAALAQQGLRADVSGRPKHIYSIWRKMQK KRLSFDQLYDIRAVRVMVDDVAACYAALGAVHSLWAPVPSEFDDYIARPK ANDYRSLHTAVVGPEGRTIEIQIRTHEMHAQAELGVAAHWKYKEGGKGGE KAFDRKILWMRQLLEQVQEGEHGELAGALDAELIEDRVYALTPKGEVIDL PQGATPLDFAYHVHTMVGHRCRGARVNDRIVPLTYRLRSGDRVEIMTAKE ADPRRDWLLASNGFLASGRSRDKVRAWFHKLDRARNVQAGKDLLDRELKR LGLQHADLSVATRKFHADTIDDLYIQVALGDTGPNQVSRALLEAERAASQ PAVPAPPRPTARREGLGKSKFTVEGVGNLLVQLARCCQPVAGEPIAGYLT RGRGITVHRTDCAALARLAAAHPQRVLPVEWGKAGTGYEVDVQVRAVDRR WLLKDITNLIAQEDAHVLEINSDNVRDTGRAQLRLRLKVSDYDQLSGLLG KLDALPGVSEVRRLG >XOO1613 rfaY, RNA polymerase sigma factor MRHAGNRTGSAPMNADTLDLMLQRDLPSAAAGCQQVDGRSALAYQNTVPP MSLAITRDIAASEDIAQEAFLRAWQRLAQLHQPASCLPWLRQTTRNLARD WLRANRHRARSGEAAELAIAMAADPAPSRADQLLQVEEEIAALDIMSALP EGGRRAGIGSAAVRRHGGAQLSIPAHTATHHAPHARARCAQTRRHPGTAV VPLHVQSGRDDGEHSGRHSADRAARHAVGDALRAGGGHRCSGSCKLFPDD DIRVQIHLR >XOO1548 rfaY, RNA polymerase ECF-type sigma factor MRNCAFARIILHANPPYLPGRRHAPGHRPADPLQQPAVATPRHRAEGGRQ LLPRPRRTGAGNRHAPVAGISRLRPGSAFSTWMYRIALNVAISDLRGRRA DRAGCGMERIADPQAHNPVRAQQVAALYAFIAHQPPLERALLLLYLDKHS YREIGEVLGISETNVATKLSRLKTRMRGER >XOO4301 rhlB, ATP-dependent RNA helicase MLNLIAHVGSPGNQNGPPERAGRYIALNWGIARLNQVSVLKPRCPPQEPQ FATLSASMQAAPGLPWAPHEDGIMSDKPLTDVTFSSFDLHPALVAGLESA GFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLNRPAL ADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQ RELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFI KDIRFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETETI TAARVRQRIYFPSDDEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTL ERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHIDGVK YVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSLPDIEAYIE QKIPVEPVTSELLTPLPRAARVPVEGEEADDEAGDSVGTIFREAREQRAA EEQRRGGGRSGPGGGSRSGSGGGRRDGASAGADGKPRPRRKPRVEGEAPA AAAQTEKPVVAAAAAQAPSVGMADAERAPRKRRRRRNGRPVEGAEPAVAS TPIAAPAAPRKPTQVVATPVRAANKSSGSPSLLGRIGRRLRSLVSGN >XOO0133 rhlE, ATP-dependent RNA helicase MSRKADLLSLQLPPLFESALARAGVRTLTPIQVAMIPPMLAARDLIVTAQ TGSGKTLAYALPLLQQRLQAPEQVPRVLGGLILVPTRELVAQVAQTLLSL AAALPRRLKIVAATGGEAINPQLMALRGGADIVIATPGRLLDLVTHNALR LSQVRTLVLDEADRLLDLGFGAEIDRILALLPAQRQSVLVSATFPPAIAS LAKRRLRDPLRITIDATPEHAPAIAQRAIAVDAGQRTQLLRHLLQEHAWP QLLVFVASRHTADKVAEKLSKTGIEALPLHGELSQGRRERTLRAFKQADV QVLVATDLAARGIDIDALPAVLNYDLPRSTVDYTHRIGRTARAGASGKAI SFVTAERAQQWRLIEKRQGLRVPTSVIEGFEPSPAEASARDAPDAAVRAA DDNGGIKGKRPSKKDKLRAAAQAQTGKPG >XOO0770 rhlE, ATP-dependent RNA helicase MLLHLQCVCAPGLAWWRRFTWSFLMSFESLGLAPFLLRALAEQGYETPTA IQQQAIPLVLAGHDLLAGAQTGTGKTAAFGLPLLQHLGTSPQPVNGPRKP RALILTPTRELATQVHDSLRGYSKYLRIPSAVIYGGVGMGNQLDTLRRGV DLLIACPGRLIDHIERRSVDLSGIEVLILDEADRMLDMGFLPSIKRILTK LPRQDRQTLLFSATFEENIKQLALEFMRNPMQIQVTPSNTVAESITHRVH PVDGARKRDLLLHLLAQDSREQTLVFARTKHGSDKLALFLEKSGIKTAAI HGNKSQGQRMRALSDFKAGRVTVLVATDIAARGIDIDQLPKVINYDLPMV AEDYVHRIGRTGRNGSTGEAISLVAQDEAKLLRQIVRMLGRDVEIRDVPG YEPQTPIRWGNSAPGRAEQPGGDRAPRKSHARRPHGDAPRQAHAHAGPKK PGGQRSGGPRQANAGPGAGRRDGGRGGQRPSGTR >XOO4303 rho, transcription termination factor Rho MSDHPSSDTGSSVDAPVEKRVRKPRVSKTAVTDEDGGAQQPNLPLPASPA PEAPRAPQAPSRAADPAPTQTSRDGAHAGPAPSANHGGDTHGESREGGQS QQQRFNQAQQQQNQNQAQSQGQGQQQAQAQAQGQNQNAGQNQQGQGGQGQ GQNQQGQNQQGNRRDRFRNRRDRGPRDRFGNEGGGMPSSDGSNEPFIARP HPAVPEGFPVYSLSDLKRMPAQKLLDIADQLNIQEGVARARKQDVIFALL KVLTRHGEGVAADGVLEILPDGFGFLRAAEASYLAGPDDTYISPSQIRRF NLRTGDHLSGRIRFPKDGERYFALSIVDTINGEPLEASKGKVLFENLTPL FPRRRFRLERGDGSTEDITGRILDLMAPQGKGQRALIVSPPKAGKTMMMQ QVATAITTNHPEVHMIVLLIDERPEEVTEMQRTVRGEVISSTFDEPAARH VQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNNVVPSSGKVLTGGV DANALHRPKRFFGAARNVEEGGSLTVIATALVETGSKMDEVIYEEFKGTG NSEVHLNRRITEKRVYPAIDINRSGTRREDLLIEPELLQKIWILRKLLHP MDEIAAMEFLLDKMKTTKSNDEFFSSMKR >XOO1855 rnc, ribonuclease III MSNRIFQRGDPIGHAFADPDLLAQALRHRSAGTPHNERLEFLGDGIVNLL VAEALYQRWPKADEGALTRARAELVREGALAVIGRTLNLGERLTLGPGEL KSGGHRRDSILADAVEAIVAAIYLDCGFERCRAVVLPWFEASLAALPVGK AEKDPKTRLQEWLQARQLPLPNYALISESGDEHAKQFHVACILEQPVARA EGQGTSRRLAEQQAATLVIAQLDSRM >XOO3648 rnk, regulator of nucleoside diphosphate kinase MFVHRLQIRPVQLWGCEARLRQSAGGKPCALHGLRSDMPTFFGIAASSDR RGMRIQIAMASLARRSEIPRLAGTLHVSAMHPALRSAHGALILPMPLAVL ASRIRQETAMTSQHSSGLPPSSLVSSHDLARREALLDSPSFNKHPAATAL SDELGRARVLPPDQIRGDVVTMHSRIECEDQLHGGRHTLPPVHPHEADVQ HGRICVLAPVGSALGGLSVGQRIDWRTPDGRGLRLRATAVHDQPTAAGDI PR >XOO2871 rpfG, response regulator MPTAHLLHMLVQSLEQRIVRESRHRRRRHRFSVLENRGANAMQDVSGRPG GAFSTDTWVSCAEKADMGLNIVIVDDQMSARTMLRHVIEDIAPELKVYDF GDPLDALAWCEAGRVDLLLLDYRMPGMDGLEFARRLRRLPSHRDIPIILI TIVGDEPIRQAALEAGVIDFLVKPIRPRELRARCSNLLQLRQQSESVKQR ALSLEQRLLASMNEVEERERETLSRLARAIEYRDAGTSAFLERMSHVAGL IAEQLGLSEEEVRIIEMAAPLHDMGKIAIPDSVLLKPGKLTDDEMSVMKR HPRIGYELLSGSQNRFIQVGALIALRHHERYDGTGYPDGLVGEAIPLEAR IVAVADVFDALLSPRPYKEAWTVDAALAYLYAQRGRLFDPRCVDALLRGR AQLEQICGEFSTASARPGV >XOO3558 rpoA, RNA polymerase alpha subunit MTVTANQVLRPRGPQIERLTDNRAKVVIEPLERGYGHTLGNALRRVLLSS IPGFAITEVEIDGVLHEYTTVEGLQEDVLDVLLNLKDVAIRMHSGDSATL SLSKQGPGTVTAADIRTDHNVEIINGDHVICHLTKDTALNMRLKIERGFG YQPAAARRRPDEETRTIGRLMLDASFSPVRRVAYAVEAARVEQRTDLDKL VIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGAAKPAASGVDP VLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT EIKEVLAQRGLALGMKLENWPPAGVAQHGMLG >XOO3591 rpoB, RNA polymerase beta subunit MTSYSFTEKKRIRKDFGKQRSILEVPFLLAIQVDSYREFLQEDVESTKRK DLGLHAALKSVFPISSYSGNAALEYVGYKLGQPVFDERECRQRGMSYGAP LRVTVRLVIYDRESSTKAIKYVKEQEVYLGEIPLMTGNGTFIVNGTERVI VSQLHRSPGVFFDHDRGKTHSSGKLLYSARIIPYRGSWLDFEFDPKDALF TRIDRRRKLPVSILLRALGYNNEEMLAEFFEINTFHINPDEGVQLELVPE RLRGETLNFDLADGDKVIVEAGKRITARHVKQLEAAGVAALAVPDDYLVG RILSHDVVDGSTGELLANANDEISEDQLTAFRKAGVDAVGTLWVNDLDRG PYLSNTLRIDPTKTQLEALVEIYRMMRPGEPPTKEAAQNLFHNLFFTFER YDLSTVGRMKFNRRVGRKDVLGESVLYDKKYFAERNDEESKRLVAEHTDT SDILEVIKVLTEIRNGRGVVDDIDHLGNRRVRSVGEMAENVFRVGLVRVE RAVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLS EVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLI NSLAVFARTNQYGFLETPYRKVLDGKVSDDVEYLSAIEENEYVIAQANAL TDAKNMLTEQFVPCRFQGESLLKPPSEVHFMDVSPMQTVSVAAALVPFLE HDDANRALMGANMQRQAVPTLRSQKPLVGTGIERAVARDSGVTVNALRGG VIEQIDAARIVVKVNEAEIGGGTDAGVDIYNLIKYTRSNQNTCINQRPLV NVGDVIARGDVLADGPSTDIGELALGQNMLIAFMPWNGYNFEDSILLSER VVEEDRYTTIHIEELTCVARDTKLGPEEISADIPNVSEQALNRLDESGVV YIGAEVRAGDIMVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVP PGMDGTVIDVQVFTRDGIEKDKRARQIEENEIKRVKKDFDDQFRILEAAI YARLRSQIVGKVANGGANLKKGDSVTDAYLDGLKKSDWFQLRMKDEDAAD AIERAQKQIQAHEKEFEARFADKRGKITQGDDLAPGVLKMVKVFLAVKRR IQPGDKMAGRHGNKGVVSNVVPVEDMPYMATGESVDIVLNPLGVPSRMNI GQILEVHLGWAAKGLGRKIQRMLEAQAAVSELRKFLDDIYNHDNAINAQR VDLSQFSDEELLNLGKNLIDGVPMATPVFDGASEAEIKRMLELADLPQSG QTQLYDGRTGEAFDRKTTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQP LGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRNQMYKNI VDGEHEMVAGMPESFNVLVKEIRSLAIHMELEE >XOO3590 rpoC, RNA polymerase beta' subunit MKDLLNLFNQQRQTLDFDAIKIALASPDLIRSWSYGEVKKPETINYRTFK PERDGLFCAAIFGPIKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRE RMGHIDLASPVAHIWFLKSLPSRIGLMLDMTLRDIERVLYFEAYVVTEPG LTPLERRQLLTEEQYLTARQEYNDDFDAAMGAEAVYELLRTIDLQSEMTR LREEIASTGSETKLKRLTKRIKLIEAFLESGNRPEWMVMTVLPVLPPDLR PLVPLDGGRFATSDLNDLYRRVINRNNRLRRLLELNAPDIIVRNEKRMLQ ESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYS GRSVITVGPYLKLHQCGLPKKMALELFKPFVFAKLQRRGLATTIKAAKKL VEREEAEVWDILEEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH PLVCTAFNADFDGDQMAVHVPLSLEAQLEARALMMSTNNILSPANGEPII VPSQDVVLGLYYMSRALENKKGEGMVFANTSEVKRAYDNRVVELHAKVKV RITQVDVDAVDGKRTSGTSIVDTTVGRALLSEILPEGLPFQLANTEMTKK NISRLINSSYRLLGLKDTVVFADKLMYTGYAYATRAGVSIGIDDMLIPDE KKGILTEAEAEVLEIQEQYQSGLVTAGERYNKVVDIWSRTSERIAKAMMD TIGTEKVENAKGETIDQKSMNSLYIMADSGARGSQAQIRQLAGMRGLMAR PDGSIIETPIKANFREGLNVQEYFNSTHGARKGLADTALKTANSGYLTRR LVDVAQDVVITEIDCGTTEGLIMTPIVEGGDVVEPLKERVLGRVVAEDVY LPGNDEEPIVTRNTLLDEAWVAKLEDASVQSVKVRSTISCESSFGVCARC YGRDLARGHQVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAVD NITVKTTGSVKFNNLKSVAHASGSLVAVSRSGELSVLDGHGRERERYKLP YGATITAKDGDAVKAGQSVANWDPHNHPIVSEVAGFIRFIDFVDGVTVIE KTDELTGLASREITDPKRRGAHAKELRPIVRIVDGKGNDLTIPNTDLPAQ YLLPPRSIVNLQDGAAVGVGDVVAKIPQEASKTRDITGGLPRVADLFEAR KPKDPAILAERSGIISFGKDTKGKQRLIIKDTDGSEHEELIPKYRQIIVF EGEHVTKGETVVDGEPSPQDILRLLGVEPLAAYLVKEIQDVYRLQGVKIN DKHIEVITRQMLRKVEIVDQGNSKFLNGEQVERQRVIEENARLVKRNELP AKYDPVLLGITKASLATESFISAASFQETTRVLTEAAVRGTRDNLRGLKE NVIVGRLIPAGTGLAYHAGRRKASGLTDSEMETLSGKPAGAEPVAALADA GADEE >XOO0598 rpoD, RNA polymerase sigma-70 factor MARALMANERPAQQSDIKLLISKGLEQGYLTYAEVNDHLPDDLVDPEQIE DIISMINGMGIDVHEVAPDAETLLLNDGNTGNREVDDTAAEEAAAALTAL DTEGGRTTDPVRMYMREMGTVELLTREGEIAIAKRIEEGLSQVQAALGVF PLSTEMLLADYEAHKEGKKRLAEIVVGFNDLIEEADAAAAALAAAGPVAV DEDALDEDDDEDGDDAAAEEEVGPTGPDPVEVATRMQNLANEYAKFKKVY AKNGAEHKLVVKAREDMAAIFTTLKLPLPLTDALVTQLRGVVNGIKDHER KVLHLATTVARMPRKDFIRSWEGNQTNLEWVEDALKRKQKWSSALRDVKD QIISEQQGSMEMEKASYLTLGEIKEISRAMAYGEAKARKAKKEMVEANLR LVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWI RQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQQFGREATPEELAK EMDMPEDKIRKVMKIAKEPISMETPIGDDEDSHLGDFIEDTNVESPIDNT TNINLSETVRDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRE RIRQIEAKALRKLRHPSRSEQLRSFLDID >XOO1919 rpoE, RNA polymerase sigma factor MQRPVSRARAIFTLAHAPLRTTARAPIPRTGAPPWQKPISGSMQCSTSPW QCGARSLRPRPQRRWAIPSFRLPANPNTWSSTVACSWAWHSCSATSHGPI KPALGWWSHWRSTFQSYCSATSRSRACGRSLHPRLRLPVWRSCCCSLQYC CGSNASERHTRRSPVASPLPNPTPDRMSAIPGHDDDETGRLLTATAGGDR HAFEALYRQTSPKLFGVCLRMIPQRAEAEEVLQDVFTLIWHKAGQFDPSR ARGLTWLAMIARNKAIDHLRANAPQRRNVALDDAGELRANDASPLERTER ASTRRRIDHCLAELEPPRSELIRTAFFEGITYEELAARTDTPIGTIKSWI RRGLAKLKACLER >XOO3003 rpoE, RNA polymerase sigma-E factor MPALMNDTDTLGDATDRMLLRRMAAGDRDALASMYQNYHSRLCRFLSRLT RRPDIIEEAINDCFWIAWQKAGDFRGDSQVSTWIMGIAYRCGLKCLRQHD GEAIDDTAVVEDHAPSADDNDDRELRDWLDKGMERLSPEQRLVIELVYGV GHKLEEVADIMQCPVGTIKARLFHARVKLRNVLPGLAGGAPYTETMQ >XOO4296 rpoH, RNA polymerase sigma-32 factor MLSCRTTVTQKARTFYKWNAGNSFCTRQSNSSTAKMVPMNQTTSTALVAN NLPIPSALGSLDAYIGAVHQIPVLSVDEEQNLARRFRDELDLDAARELVH SHLRFVVHVARGYNGYGLPLGDLIQEGNIGLMKAVKRFDPDMGVRLVSFA VHWIRAEMHEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWLNASEVT AVAKDLNVSEREVMEMESRLSGRDIGFDASSDEDDDHGPPSPVSYLVANE EDPSQAYERHDSEDNQLQLLREGMAGLDTRSRDIVKRRWLDSDSKVTLQE LADEYGVSAERIRQIEANALKKMKALFVA >XOO1284 rpoN, RNA polymerase sigma-54 factor MKLSAFERAAEQTLFSVSARMKARLQTSLAQQLVMTPQLRQAIKLLQMST TELEVEIAEAVETNPLLEWADEAAHAASDTAVESSPSASTEESQREEAAP AERDDDWSQDELQWTGSGSGGSFDDDESGGAAERVAESETLADHLLWQLH LSPLSPRDRQIGAILIDALDEDGYLREPLSAILETLALGAVVDEADVLTV LHQIQRFDPVGVGARTLGECLALQLAVLDPATPGRELALQIVAGPLERLP RSGVAGLAHELKRSAADVEQAVQLVRSVDPRPGKQIGDLSQDTYVVPDCV IWRQRGVWRASLAGRAQPKVTIHRGYENLIRSCGESDAGYLRGQLQEARW LLKSLEARGETLLRVVRCLLQHQAGFLEFGAQALRPLTLREIAGELGLHE STISRAISRKYVRTPRGTIALRSFFASGIDTDSGGEASSTAIQAMIRRLI DAENPRKPLSDAKLADLLKTSGVPVARRTVAKYREAMNISASHERVRIA >XOO2587 rpoN, RNA polymerase sigma-54 factor MKTTISAQLGQQLHLTPQLLQSIRLLQLDGMQLELEIRRALETNPLLELE ELADNGDEATTNDDGASDIAAFDELPESTMWDVQSSSWNDGDDDRMQRVA AGESTDPHVRILRELALDLDEAALGAAAFWLEQTDDAGYLTEALPMLQQL GATRLGMTVQAVEAIRQRLLHGDPAGLAACDLRECLQAQLRALPGRVPAR HLAARILDGDLELLAAHDYAVLARAHDAEVDDTREAVRLILSLQPRPGDD LLQESNASVIPDVLAWHADGSWRVALNPATTHRVSINPVHERALAEAGEA AQPLRDMLQEARWLTRGLSMRYETLLRATRAIVERQAAFLARGEEAMAPL TLKEIADKIGMHESTISRITTGKYIQTPRGTFELKHFFAVRLEGASVSGQ AVKAMVRRLIESEPAGRPLADEAIAGLLSRQGVHIARRTVAKYREQLDIA PARERRRTTKPLLARAG >XOO1148 rpoZ, RNA polymerase omega subunit MRGRCWSPGARMARITVEDCLEVVNNRFELVMMASKRARQLANGVQPLIE NAAASDKPTVMALREIAARRIDNALIDEVEKAERERAEREALEWAAAEVV ADEDMSKNDD >XOO4418 salR, sal operon transcriptional repressor MASRPPLSSASHSNHCSGNTPTSAPCRFMSDPSCGMLQRHPCMQSRLAAL RASRYHGPHRHTCIRHPRYRSSACASRSFRTHLKRPRLDKVRKSVRRTSR ATTIDEVAALAKVSPMTVSRVVNNTGGVRDATRERVMRAVDKLGYTPNLA ASALAAAQSTRIALIYSDPSGAYLRELLLGVLRVASRTPIQLVIDCWDDL DADAERKAARKLAKGVAGVILPPPLCESKAAVLELVRAKVPVVAIASNYF SPDVACVRIDEFTAAKEITEHLIAQGHTRIGYIAGHPNLSASTRRFEGFQ AALEDAGLRLDLHLVQPGDYTYKSGLVAAEKLLARKCRPSAIFASNDDMA AAAISVAHRRGLDVPRDLSVVGFDDTSAATAVWPEITTVQQPIAAMADAA LDILLKTIRAKERTAKMVDHVVAHLLVKRDSVAAPTADDAVE >XOO1870 scoF, cold shock protein MQRSRITMPNGTVKWFNDAKGFGFISPEDGSADVFAHFSAINSKGFRSLQ EGQRVSYDVTQGPKGAQASNITPVE >XOO4601 slyA, transcriptional regulator for cryptic hemolysin MVAARQWQRLADQAFAEFELSSACTGPLLMIGRSGGGIRQVALAQQLGME GPSLVRLLDKLAAQGLLCREADSSDRRANQLWLTEDGQVLVGRIEIRLDV LRAEVFGTLSDTDVQGVLTLWEQIAQAHARSRCWAACFSLPVGCNRENAD QDRRPGAADPGNGGGGRVGVAVPVARVHAGAVDARCTCRRRCDAAGDRSG ARQRGRAGGRQ >XOO4341 smeR, two-component system regulatory protein MTHGAAPAGADGMSSLPPIGHVLIVEDEPRLAAVVGAYLHAGGHSHDWIA DGAQALGAFRAKKPDLVLLDLMLPNRDGLEICRDLRKESAVPVIMVTARV EEIDRLRGVEIGADDYICKPFSPREVAARVQAVLPRHRHDPYGAPAPGLH IDEDACRASVDGRALDLTQVAFRLLRTLAAAPGRVCSREHRMGRLSADHR SVTDRTVDSHVKNLRRKLADGEDWVRSVSGAGYRVEPSFGIRDWRFV >XOO1257 soxR, transcriptional regulator soxR family MQRALSVGEVAKRSCVAVSALHFYERKGLISSLRTAGNQRRYARDVLRRI ALIRVAQRLGVPLQQVLDAFSVLPEHGTPTRAEWARMSARWRGQLDACIN ELQALRDQLTDCIGCGCLSLRRCRLSNPDDAMGQRGEGALRLGSLIVD >XOO1149 spoT, pentaphosphate guanosine-3'-pyrophosphohydrolase MNPGPTAQATVVTSPSSDQAIPDYVLHLERAASYLPKEQLPILRRAWEVG ATAHAGQTRKSGEPYITHPVAVAGVLAELGLDMESLIAAILHDTIEDTPL TREELAFEFGEAVAELVDGVTKLDKLKFRDRQEAAAESFRKMLLAMSRDL RVIMIKLADRLHNMRTLGAQSTEARGRIARETLEIYAPIAQRLGMSLIKS ELQNLGFRALYPWRHAIIEKHIRSQPVVRRESMAQVEVQLSQRLAKEGLE HRLVSRIKTPWSIYSKMHEENKSFDQVMDVFGFRLVVRTVADCYHALGAV HASFKPLDGRFRDFIAIPKANGYQSLHTVLFGPYGSPIEVQIRTEEMDLI AERGVAAHWTYKVGSASPNSAQSRAHDWIVELIDSQRAAGSSLEFLDNVK VDLFPDEVYLFTPKGKILALPRNSTALDFAYAVHTDVGNRAVASRVDKKL VPLRTKLVSGQAVEIITARSATPKPQWLEFVVSSKARTAIRYQLKQLEHE DAVQLGHRMLDRALEAMDSSLERLPKGRLDAFLNEHRYPRLEALLADVAL GNLMPNQAAQALMAYAEMRGGGHSKHSHEKILIDGSERGVISFANCCQPI PGDEIMGYHTAGKGIVVHRLDCPNLAELRKSPERWVPIDWDSSVTGDYDT ALVVEVENRTGVLAQLAAAIAQSQSNIERVDYLDRDFNAAVLRFNIQVRD RRHLAEVMRRLRRLHVVQSVGRQ >XOO4543 tcsR, two-component system regulatory protein MAEERGLGIRRSGLPVPGHLSPQPCSVELRCRDRRFSDIGYCESRFAFRN PCSYESQHPNPESRAFTNATSPIPNPGPSMTTLLIADDHPLFREALRGAV QRVMPGVQLLEADNVDALYTLADAQPDADLLLMDLNMPGAQGFSALVHMR SLHPQLPVVVVSAREEPTVMRRAIDHGAFGFIPKSADSDTIGRALATVLD GERWIPAEAQNLPPTDSEEREVGQRLRDLTPQQFRVLQMLGAGRLNKQIA YDLGVSEATIKAHVTAILRKLGVTNRTQAVLMAGKLAIDADGIVLPPPED D >XOO1105 tctD, two-component system regulatory protein MAAAYSREAVMDLSLRGGGLGSRDWELVKSNCNGRKLLCARPVTFRPRPS AVTHPQSLFTNPSPMRLLLVEDNADLADAIVRRMRRSGHAVDWQADGLAA ASVLRYQSFDLVVLDIGLPKLDGLRVLAGMRERGDTTPVLMLTARDGIED RVQALDVGADDYLGKPFDFREFEARCRVLLRRNRGQASEVVQIGGFVFDN AAHTLTLDGVPIELPNREYRLFDILIGRLGRVVGKDEIGNGLFGFDDDAG PNAIELYVGRLRRKLAAAPLRIVTVRGAGYKLEEADPHAPVEPGADG >XOO2225 tex, transcription-related protein MHYSQLAHQIARTIADEIGAQPAQARAAIALLDEGASVPFIARYRKEVTG GLDDTQLRNLETRLTYLRELEERRAVILSSIGEQGKLSDELRDEIVAADT KSRLEDLYLPYKPKRRTRAQIAREAGLEPLADGLLSDPTQTPEVAAAAFI DAEKGVADSKAALEGARAILMERWGEDAALLGELRSWLSDNGVIRARVAE GKEEVGAKYRDYFDHAESLAKIPSHRLLALFRARREEFLYLDLDPGSDAE AGHQYAEGRVARSAGISNEGRPADRWLLDACRLTWRAKLHMHLLLDLFNQ AREKAEAEAIAVFGDNLKDLMLAAPAGPRVVLGLDPGIRTGCKIAVVDAT GKLVATETIYPHEPKRQWDQSLQTIKKLCMQHNVELIAIGNGTASRETDK LAGEAIALCGAVKLQKVVVSEAGASVYSASEFAAKEFPNLDVSLRGAVSI ARRLQDPLAELVKIEPKAIGVGQYQHDVDQYRLAKALEARVEDCVNAVGV YVNTASAALLSRVSGLSSTVAENIVRHRDDNGPFKRRKDLLKVPRLGDKT FEQCAGFLRIADGDEPLDVSAVHPEAYPVVERIVGSTGKPIKALLGDGSF LRGLKPEMFTNEQFGVPTVRDILKELEKPGRDPRPEFKAAQFAEGIEDIK HLKPGMVLEGVVSNVAAFGAFVDIGVHQDGLVHISALSETFVKDPRDVVK AGDIIKVKVLEVDVARKRIALSCRLSDTPAPTDGSAQPREARGNGPGQGR RDGGGRVQAQANSKPRITVPPADNALAEAFARAKRS >XOO2204 tlpC, methyl-accepting chemotaxis protein MALRGHAGMTRLRAHATAGLHALAYRSSYGSVRGASGRCRTPPLSHFPAR QPWRRYRHQLSPVLPRPRARSPPRLPTRPIMSMEPWAYQLMDLQMPRVDG VEAIQRIHQVDAAAKVIVLPTYTCDARAVRALQFGACGYLLKSGLRRELV DTIRDVGNCCQALAPRPDKAKRVIGPLHAEANVESTPPQNPHAHPKMDLL ALTYPLIAAGEPLQYGYHRPLIKIPTIALCHWRSVIYFLNAFRGNAMLRH SLRVRLLLPVLALGLVVMSGLTVVLAFTEAKRIESETQASIGRTSILTQT MFSLTRTMLLDRVNATIRHLHKESDALGLASQGNEVHVGGRIANDLLLGQ KSQANTFSLVDSAASILVDDGASSSKQGNATLFSRVGDDFVRISTSFTNA DGRRAVGSVLDPNSQAAIKLRNGESFYGVVDILGNPYVAGYEPIFAGNEK RVIGAWGVAHKADTPELATVIGSRRVLSSGFVAVLDIKNKLRFQSDTGST TDRATIERIVKEKPQDWVVVKEEIRDWGFTLVSAYPKSDLNALILHQSLW IAGVGLLICALMVGVQSALIWDRVLRPVQNLTAVAEELSMGKWNHTIAEV NLKDEIGTLARAISRLSNSVRLAMERLNKR >XOO3253 trpI, transcriptional regulator MRYIDKIAATCDLESHMTVLLPPLAALRAFEAAARLQSVSRAAQELHVTH GAISRHVRSLEQALGTALFARQGRGLVLTAAGVRLGDATGEGFGVISQTW AALQRPVAEAPLVLGCSGSLLARWVIPRLGLLQHDLPDVRLHLSASEQPP GPDLDGLDAALLLDTPPWPSEWQVHALGVEWIGPVLSPQLASTLRIDGND PTTLCHHALLQTRSRPQAWPEWAQAQGLEPEALRFGTEFEHLVYLLEAAA AGLGIAIAPQPLVAADLAAGRLLAPWGFTATHGRWVLCAAKRNPDPRIGR LADWLGKALAEDQHTSPAMDATKIADVRCSTASPAQGW >XOO3449 uidR, transcriptional regulator uid family MQAPCRPPPMSNVLLLRTAKQREEGLLDDVLDAAERCIDEIGLAATSFEL IAERTRLSCRSLLQRFEDKDALVRALLERNYMRPIRQMWLVERPADVHVV DFIAGLLEDWLLQQINIKRTRIDLELHLATLRDPVLAAFVRLQSASLIEH LSALLKRLLRGHTDTASSEHEFQARVFAVAAMCGGLHSVMTSGMELKRMH LQLILRESLSGILKSAPV >XOO2080 vacB, RNase R MTKKNTPDSNRPSRRKSTNAGESSTAEQQKLPGWMPDFLVRAAAGASTKS ANKRAADKASNAASQPPAALPTPPAPRAPHPRKSGPPAPPPERFQTAAPP AAAEFKDPHADREALRYAEPIASREAILQLLEACDGPQTAEEIAEQLNLS DRIDALGKRLAAMVREAQLVQNRRGGYAPVQQTSLIAGVVIANPEGFGFL KPDGGGDDLFLPPFEMRKVMHGDRALANVTGIDRRGRREGAIARVLERGM SRMLGRFFYEHGVAYVDPDDKRIQRNVQIAPDGIGEAREGQLVVCELIAP PDARRPAIGKIIAVLGDKLTPSLVVEMAIHGHELPHEFPQEVLDEAAAVP LVVEPQMIGGRVDLRQMPLVTIDGEDAKDFDDAVYCEPNADGFRLVVAIA DVSNYVRPGTPLDDEAQKRATSVYFPGFVVPMLPETLSNGICSLMPKVDR MCFVCDMQVGGDGEVTGSRFYEAVMNSHARLTYNQVWKAVGEGDADTKAF IGPLLPQVQRLHQLYHVLSKARTHRGAIEFETSEVRFVLDNTGEVTQAGM LVRNDAHKLIEECMIAANVEAARYLLSMHVPAPYRVHERPPESKYEDLLE FLKEFQLSLPAWSKVRPGDYTKLLKKVRARPDAALLESVLLRSQSLAVYS PENNGHFGLALEAYAHFTSPIRRYPDLLVHRALKHALTGASPEKFIYTPR QMAALSLQCSERGRRADEAEREVDERYRAAWMEKHVGGQFDGVISGVTGF GLFVELTQSKVNGLVHVTQLPQDYYQFDPIRKTLSGERRGREFRLGDPVR VLVLKASMEGRKIDFRLAEEGAAPEAPLPLRETSTKRKKKSS >XOO3735 vanR, transcriptional regulator gntR family MAERLGISRTPIRQALPALCQEGLLVQAGNRGYAVRRFSQRESLDALTVR ALMEGMGARTVAEEGASEE >XOO0169 xylR, xylose repressor-like protein MTTTDVLPCMPSLFANAAIRSHYRRRSDGQAAAPRERLLLDLIRRAGQCE RSDLPRASGLSVPGIKGIIDPLVADGLLQLGPSLRRGRGQPSAQVRLVPE YAYSVGVSLMVDGIAVVLIDFAGQVRGMRQFTAFPLTLAVVRAQLPALLQ VLLLAAGVDRQQLFGVGLSMTGPRIGDGTRVNPPLSLAAEWMQVELDRLV ADCLHLPVWMDNDAHCAALAEAVYGIGRQSPDLVYLSIADGFAAGVIAAG NVRRGAHGNVGELGRISAITGMARPTLESLRQALAADGYVLPDLHTMLQH YDAGWPQIDAWLDAVQPTVTLAVAAIIALIDPRVIVFGARLPTDLAHRLI ARIAFEPAPRRGVALPCPALKVGQVTAYASVLGAAMLPFKETLF >XOO1112 ybhD, transcriptional regulator MTIKFDLNDLQAFRAVAENGSFRRAAERIRITQPALSRRIDKLESALNVK LFERTTRKVSLTTVGQAFMPQVERMLDDLDMALMSIGDAGSRRMGTVTVA CVPSAAYYFMPQAIHGLHQLFPKIRISLLDGSASHVSAAVASGEADFGVS FSGNLAPEVEFELLLQERYVIACRQDHPLSGRAQVSWQEVYGYDYITLDK TSGNRLLLDRALSAFTPDKPSICETRHVTTLLGLVEAGVGIAAVPSIAMP SGPHPVLATVPLVEPEVSRNVGILKRRGRTLTPTALELAELVRRMPARSR >XOO2201 ybhD, transcriptional regulator MRLTLRQLLIFTDVADTGSTTAAGERVALSRSATSGALNELGSLLGAQLF DRIGKRLLLNDNGRALLP >XOO1741 yoaA, ATP-dependent helicase MSQLATVSIEALSEGGALARQLDAFAPRAAQLRLTGAIAEAFEQRDVLLA EAGTGTGKTYAYLVPALLSGLKTIVSTGTRALQDQLFHRDLPRVRAALGV GLRSALLKGRANYLCKYRTQQARGEPRFATPEQVSQFQRIVAWSGRTQSG DMAELEALPDDSPLLPMVTSTVDNCLGTECPFYSECFVVQARQRAQAADL VVVNHHLLLADLALKQEGFGEILPGAQAFVIDEAHQLPELAANFFGESFG MRPWQELARDCMVEARLVAGAQASLQAPILALDDALRSLRAGMEGLPARG TQWRALAKPQVREGFDAVLSSLARLGQSLLPLREASPGFDGCTARAQEAL NRLSRWLGEDVSVADFAQDPPEETVDNDVLWYELSPRGFRCQRTPLDVSG PLREHREKSHAAWVFTSATLAVGGEFDHIAQRLGLNDPVTLLQPSPFDWA RQALCYLPPNLPDPAARGFGTALIGALTPVLEASKGRAFLLFASHRALRE AAEALRGAPWPLFVQGEAPRATLLQRFRDSGNGVLLGSASFREGVDVVGD ALSVVVIDKLPFAAPDDPVFEARLDAIRREGGNPFRDEQLPQAVIALKQG VGRLIRSETDRGVLVLCDPRLVNKSYGRTFMKSLPPFARTHAIADVQAFF GVAEAVGDNGVLALPFGDDRSSYSF >XOO1998 yybA, transcriptional regulator marR family MLLQIYFSEKMQCMNVPSTAAPSFGLLLRQVRDALMRQLDAEMKGELPDF GFSHYVGLKVLAVRSPCTANELALALDQTPSAVTRLLDKLEALGAVRREP HAQDRRALQIVMTEQGVALWERLRLRGERAIEHGLRDLSAPERELLTSLL IRVRDALNA