Gene list
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COG category: Transcription
Gene type: CDS
Gene type: CDS
Genomic element: chromosome 2
Number of genes found: 70
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Rhodobacter sphaeroides 2.4.1, 2.4.1; ATCC BAA-808 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | RSP_3768 | hypothetical protein | chromosome 2 | CDS | 890398 | 363 | - | 0.603306 | |
NA | RSP_3621 | Cold-shock DNA-binding protein | chromosome 2 | CDS | 733277 | 234 | + | 0.619658 | |
NA | RSP_3445 | transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome 2 | CDS | 515634 | 636 | - | 0.699686 |
NA | RSP_3586 | Putative aromatic pathway regulator | SubName: Full=Putative aromatic pathway regulator; | chromosome 2 | CDS | 679748 | 447 | - | 0.720358 |
NA | RSP_3095 | sigma24 | SubName: Full=RNA polymerase sigma-70 factor; | chromosome 2 | CDS | 138518 | 531 | - | 0.730697 |
NA | RSP_3165 | transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome 2 | CDS | 219671 | 741 | - | 0.695007 |
NA | RSP_3317 | transcriptional regulator, TetR family | SubName: Full=Transcriptional regulator, TetR family; | chromosome 2 | CDS | 377984 | 645 | - | 0.716279 |
NA | RSP_3609 | ParB-like nuclease | SubName: Full=ParB-like nuclease; | chromosome 2 | CDS | 706548 | 1821 | - | 0.724876 |
NA | RSP_3324 | transcriptional regulator, LuxR family | chromosome 2 | CDS | 387330 | 945 | + | 0.687831 | |
NA | RSP_6195 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 2 | CDS | 743670 | 222 | - | 0.644144 |
NA | RSP_3664 | transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome 2 | CDS | 771798 | 750 | - | 0.677333 |
NA | RSP_3316 | Hypothetical protein | SubName: Full=Transcriptional activator, adenine-specific DNA methyltransferase; | chromosome 2 | CDS | 377156 | 507 | + | 0.654832 |
NA | RSP_3088 | two component transcriptional regulator, winged helix family | SubName: Full=Two component transcriptional regulator, winged helix family; | chromosome 2 | CDS | 133434 | 660 | - | 0.690909 |
NA | RSP_3202 | transcriptional regulator, AraC family | SubName: Full=Transcriptional regulator, AraC family; | chromosome 2 | CDS | 255489 | 912 | + | 0.723684 |
NA | RSP_3226 | Silent information regulator protein, Sir2 | RecName: Full=NAD-dependent protein deacylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; | chromosome 2 | CDS | 285189 | 693 | + | 0.7114 |
NA | RSP_3339 | transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome 2 | CDS | 403124 | 714 | + | 0.72549 |
NA | RSP_3694 | Putative transcription activator | SubName: Full=Putative transcription activator; EC=3.5.99.2; | chromosome 2 | CDS | 815085 | 666 | + | 0.684685 |
NA | RSP_3676 | transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome 2 | CDS | 795171 | 726 | - | 0.688705 |
NA | RSP_3771 | conserved hypothetical protein | chromosome 2 | CDS | 915658 | 705 | + | 0.628369 | |
NA | RSP_3528 | transcriptional regulator, TetR family | SubName: Full=Transcriptional regulator, TetR family; | chromosome 2 | CDS | 609070 | 651 | - | 0.675883 |
NA | RSP_1422 | ParB-like nuclease | SubName: Full=ParB-like nuclease; | chromosome 2 | CDS | 938143 | 1086 | - | 0.708103 |
NA | RSP_3094 | Putative transmembrane anti-sigma factor | chromosome 2 | CDS | 137758 | 768 | - | 0.744792 | |
NA | RSP_3700 | transcriptional regulator, LacI family | SubName: Full=Transcriptional regulator, LacI family; | chromosome 2 | CDS | 821068 | 1014 | - | 0.700197 |
NA | RSP_3125 | transcriptional regulator, ArsR familyy | SubName: Full=Transcriptional regulator, ArsR family; | chromosome 2 | CDS | 169950 | 333 | + | 0.666667 |
NA | RSP_3514 | transcriptional regulator, AraC family | SubName: Full=Transcriptional regulator, AraC family with amidase-like domain; | chromosome 2 | CDS | 593360 | 1005 | - | 0.684577 |
NA | RSP_3620 | Cold-shock DNA-binding protein | SubName: Full=Cold-shock DNA-binding protein; | chromosome 2 | CDS | 732401 | 207 | - | 0.603865 |
NA | RSP_3022 | transcriptional regulator, TetR family | chromosome 2 | CDS | 53250 | 702 | + | 0.656695 | |
NA | RSP_3418 | transcriptional regulator, AraC family | chromosome 2 | CDS | 486040 | 294 | - | 0.727891 | |
NA | RSP_3430 | transcriptional regulator, winged helix family | chromosome 2 | CDS | 501245 | 666 | + | 0.728228 | |
NA | RSP_3731 | transcriptional regulator, DeoR family | chromosome 2 | CDS | 856811 | 765 | - | 0.700654 | |
NA | RSP_3436 | transcriptional regulator, LysR-family | SubName: Full=Transcriptional regulator, LysR-family; | chromosome 2 | CDS | 506714 | 882 | - | 0.725624 |
NA | RSP_3129 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; | chromosome 2 | CDS | 173637 | 1122 | + | 0.714795 |
NA | RSP_3064 | transcriptional regulator, DeoR family | SubName: Full=Transcriptional regulator, DeoR family; | chromosome 2 | CDS | 104527 | 783 | + | 0.734355 |
NA | RSP_3814 | hypothetical protein | SubName: Full=Putative transcriptional regulator; | chromosome 2 | CDS | 12213 | 918 | + | 0.638344 |
NA | RSP_3203 | transcriptional regulator, AraC family | SubName: Full=Transcriptional regulator, AraC family with amidase-like domain; | chromosome 2 | CDS | 256635 | 1032 | + | 0.708333 |
NA | RSP_3241 | Two-component transcriptional regulator, winged helix family | SubName: Full=Two-component transcriptional regulator, winged helix family; | chromosome 2 | CDS | 298522 | 675 | - | 0.69037 |
NA | RSP_3385 | transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome 2 | CDS | 448482 | 948 | - | 0.694093 |
NA | RSP_3511 | two component transcriptional regulator, winged helix family family | SubName: Full=Two component transcriptional regulator, winged helix family; | chromosome 2 | CDS | 589709 | 663 | + | 0.710407 |
NA | RSP_3665 | transcriptional regulator, LuxR family | SubName: Full=Transcriptional regulator, LuxR family; | chromosome 2 | CDS | 773439 | 717 | - | 0.640167 |
NA | RSP_3680 | transcriptional regulator, TetR family | SubName: Full=Transcriptional regulator, TetR family; | chromosome 2 | CDS | 800591 | 624 | - | 0.692308 |
NA | RSP_3341 | Protein of unknown function UPF0074 | SubName: Full=Transcriptional regulator, BadM/Rrf2 family; | chromosome 2 | CDS | 403985 | 438 | + | 0.6621 |
NA | RSP_3124 | transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome 2 | CDS | 169000 | 897 | + | 0.705686 |
NA | RSP_1414 | conserved hypothetical protein | SubName: Full=Transcriptional regulator; | chromosome 2 | CDS | 930774 | 861 | + | 0.702671 |
NA | RSP_3298 | transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome 2 | CDS | 357349 | 942 | + | 0.653928 |
NA | RSP_3464 | transcriptional regulator, LysR-family | SubName: Full=Transcriptional regulator, LysR-family; | chromosome 2 | CDS | 533327 | 930 | + | 0.698925 |
NA | RSP_3433 | transcriptionalregulator, CopG family | SubName: Full=Transcriptionalregulator, CopG family; | chromosome 2 | CDS | 505061 | 474 | + | 0.696203 |
NA | RSP_3448 | transcriptional regulator, GntR-family | SubName: Full=Transcriptional regulator, GntR family; | chromosome 2 | CDS | 518535 | 669 | - | 0.692078 |
NA | RSP_3400 | transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome 2 | CDS | 463741 | 891 | - | 0.700337 |
NA | RSP_3052 | transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome 2 | CDS | 90873 | 879 | - | 0.721274 |
NA | RSP_3606 | Sigma54-2 (RNA polymerase sigma-54 factor) | RecName: Full=RNA polymerase sigma-54 factor; | chromosome 2 | CDS | 701300 | 1299 | + | 0.732871 |
NA | RSP_3505 | transcriptional regulator, DeoR family | SubName: Full=Transcriptional regulator, DeoR family; | chromosome 2 | CDS | 583851 | 939 | + | 0.687966 |
NA | RSP_3024 | transcriptional regulator, IclR family/MhpR | SubName: Full=Transcriptional regulator, IclR family/MhpR; | chromosome 2 | CDS | 55582 | 837 | - | 0.669056 |
NA | RSP_6165 | transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome 2 | CDS | 205804 | 897 | + | 0.700112 |
NA | RSP_3109 | transcriptional regulator, MarR family | SubName: Full=Transcriptional regulator, MarR family; | chromosome 2 | CDS | 154964 | 465 | - | 0.731183 |
NA | RSP_3134 | Serine/threonine protein kinase | chromosome 2 | CDS | 179774 | 1284 | + | 0.713396 | |
NA | RSP_3546 | conserved hypothetical protein | chromosome 2 | CDS | 635584 | 396 | - | 0.580808 | |
NA | RSP_3055 | transcriptional regulator, MarR family | SubName: Full=Transcriptional regulator, MarR family; | chromosome 2 | CDS | 94475 | 471 | + | 0.694268 |
NA | RSP_3686 | transcriptional regulator, LacI family | SubName: Full=Transcriptional regulator, LacI family; | chromosome 2 | CDS | 807600 | 1041 | + | 0.694524 |
NA | RSP_3029 | transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome 2 | CDS | 61910 | 702 | - | 0.695157 |
NA | RSP_3475 | Serine/Threonine protein kinase | SubName: Full=Serine/threonine protein kinase; | chromosome 2 | CDS | 544270 | 2007 | + | 0.730443 |
NA | RSP_3309 | transcriptional regulator, AraC family | chromosome 2 | CDS | 369832 | 720 | - | 0.752778 | |
NA | RSP_3026 | Transcriptional regulator, MocR family | RecName: Full=Uncharacterized HTH-type transcriptional regulator RHOS4_30730; | chromosome 2 | CDS | 57004 | 1371 | - | 0.719183 |
acoR | RSP_3322 | acetoin transcriptional regulator, sigma54 specific, AcoR | SubName: Full=Acetoin transcriptional regulator, sigma54 specific, AcoR; | chromosome 2 | CDS | 383049 | 1836 | - | 0.736928 |
ampR | RSP_3748 | transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome 2 | CDS | 873585 | 882 | - | 0.674603 |
dorR | RSP_3045 | DMSO/TMAO-two component transcriptional regulator, winged helix family | SubName: Full=DMSO/TMAO-two component transcriptional regulator, winged helix family; | chromosome 2 | CDS | 80695 | 699 | - | 0.660944 |
dorX | RSP_3042 | DMSO reductase regulatory protein DorX | SubName: Full=DMSO reductase regulatory protein DorX; | chromosome 2 | CDS | 76617 | 774 | + | 0.647287 |
gntR | RSP_3405 | transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome 2 | CDS | 471417 | 720 | + | 0.677778 |
gvpJ | RSP_3580 | Gas vesicle protein GVPa | RecName: Full=Gas vesicle structural protein; | chromosome 2 | CDS | 674703 | 315 | - | 0.657143 |
parB | RSP_3813 | ParB-like nuclease | SubName: Full=ParB-like nuclease; | chromosome 2 | CDS | 11308 | 909 | + | 0.649065 |
solR | RSP_3684 | transcriptional regulator, LuxR family | chromosome 2 | CDS | 805374 | 681 | + | 0.697504 |