Gene list
Applied filters:
COG category: Nucleotide transport and metabolism
Gene type: CDS
Gene type: CDS
Genomic element: chromosome
Number of genes found: 75
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Staphylococcus epidermidis RP62A phage SP-beta | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SERP0613 | 5' nucleotidase family protein | SubName: Full=5 nucleotidase family protein; | chromosome | CDS | 608008 | 1506 | + | 0.314741 |
NA | SERP0734 | Ham1 family protein | RecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; | chromosome | CDS | 734395 | 588 | + | 0.336735 |
NA | SERP1513 | truncated ribonucleoside-diphosphate reductase 2, alpha subunit | chromosome | CDS | 1575579 | 2910 | - | 0.310309 | |
NA | SERP0895 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 905539 | 600 | + | 0.268333 |
NA | SERP2288 | 5'-nucleotidase family protein | SubName: Full=5-nucleotidase family protein; | chromosome | CDS | 2329253 | 1536 | + | 0.33138 |
NA | SERP2217 | cytosine/purines, uracil, thiamine, allantoin permease family protein | SubName: Full=Cytosine/purines, uracil, thiamine, allantoin permease family protein; | chromosome | CDS | 2253837 | 1167 | - | 0.323051 |
NA | SERP1739 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1778516 | 1191 | - | 0.310663 |
NA | SERP1373 | HIT family protein | SubName: Full=HIT family protein; | chromosome | CDS | 1430230 | 426 | + | 0.300469 |
NA | SERP0202 | deoxynucleoside kinase family protein | SubName: Full=Deoxynucleoside kinase family protein; | chromosome | CDS | 212435 | 663 | - | 0.334842 |
NA | SERP1865 | inosine-uridine preferring nucleoside hydrolase family protein | SubName: Full=Inosine-uridine preferring nucleoside hydrolase family protein; | chromosome | CDS | 1890855 | 942 | - | 0.349257 |
NA | SERP1614 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1637021 | 285 | - | 0.382456 |
NA | SERP0204 | cytidine/deoxycytidylate deaminase family protein | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 213774 | 507 | + | 0.382643 |
NA | SERP2046 | exopolyphosphatase | SubName: Full=Exopolyphosphatase; | chromosome | CDS | 2066632 | 1533 | + | 0.333333 |
NA | SERP0203 | deoxynucleoside kinase family protein | SubName: Full=Deoxynucleoside kinase family protein; | chromosome | CDS | 213090 | 618 | - | 0.268608 |
NA | SERP0510 | 5'-nucleotidase family protein | SubName: Full=5-nucleotidase family protein; | chromosome | CDS | 497037 | 1320 | + | 0.338636 |
NA | SERP1037 | nucleoside diphosphate kinase | RecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; | chromosome | CDS | 1083213 | 450 | - | 0.373333 |
NA | SERP1511 | truncated ribonucleoside-diphosphate reductase 2 alpha subunit | chromosome | CDS | 1574054 | 264 | - | 0.344697 | |
NA | SERP1156 | comE operon protein 2 | SubName: Full=ComE operon protein 2; | chromosome | CDS | 1195066 | 462 | - | 0.350649 |
NA | SERP0304 | nucleoside permease NupC, putative | SubName: Full=Nucleoside permease NupC, putative; | chromosome | CDS | 306171 | 1230 | + | 0.342276 |
NA | SERP0642 | inosine-uridine preferring nucleoside hydrolase family protein | SubName: Full=Inosine-uridine preferring nucleoside hydrolase family protein; | chromosome | CDS | 636822 | 909 | - | 0.335534 |
NA | SERP2077 | Na+/H+ antiporter, putative | SubName: Full=Na+/H+ antiporter, putative; | chromosome | CDS | 2103160 | 1788 | - | 0.337808 |
adk | SERP1810 | adenylate kinase | RecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; | chromosome | CDS | 1851258 | 648 | - | 0.341049 |
apt | SERP1198 | adenine phosphoribosyltransferase | RecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; | chromosome | CDS | 1235559 | 519 | - | 0.319846 |
carA | SERP0768 | carbamoyl-phosphate synthase, small subunit | RecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; | chromosome | CDS | 766435 | 1101 | + | 0.375114 |
carB | SERP0769 | carbamoyl-phosphate synthase, large subunit | RecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; | chromosome | CDS | 767528 | 3174 | + | 0.362319 |
cdd | SERP1135 | cytidine deaminase | SubName: Full=Cytidine deaminase; EC=3.5.4.5; | chromosome | CDS | 1174138 | 405 | - | 0.37037 |
cmk | SERP1045 | cytidylate kinase | RecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; | chromosome | CDS | 1091179 | 648 | - | 0.342593 |
deoC | SERP1745 | deoxyribose-phosphate aldolase | RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase; | chromosome | CDS | 1784623 | 663 | - | 0.357466 |
deoD | SERP1747 | purine nucleoside phosphorylase | RecName: Full=Purine nucleoside phosphorylase DeoD-type; Short=PNP; EC=2.4.2.1; | chromosome | CDS | 1785492 | 711 | + | 0.350211 |
fhs | SERP1295 | formate--tetrahydrofolate ligase | RecName: Full=Formate--tetrahydrofolate ligase; EC=6.3.4.3; AltName: Full=Formyltetrahydrofolate synthetase; Short=FHS; Short=FTHFS; | chromosome | CDS | 1341346 | 1668 | - | 0.361511 |
gmk | SERP0776 | guanylate kinase | RecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; | chromosome | CDS | 775250 | 624 | + | 0.355769 |
guaA | SERP0070 | GMP synthase | RecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; | chromosome | CDS | 58718 | 1542 | + | 0.381323 |
guaC | SERP0906 | guanosine monophosphate reductase | RecName: Full=GMP reductase; EC=1.7.1.7; AltName: Full=Guanosine 5-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase; | chromosome | CDS | 916896 | 978 | + | 0.334356 |
hpt | SERP0149 | hypoxanthine phosphoribosyltransferase | RecName: Full=Hypoxanthine-guanine phosphoribosyltransferase; Short=HGPRT; Short=HGPRTase; EC=2.4.2.8; | chromosome | CDS | 139858 | 540 | + | 0.316667 |
mtn | SERP1166 | 5'-methylthioadenosine/S-adenosylhomocysteinenuc leosidase | RecName: Full=5-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Short=MTA/SAH nucleosidase; Short=MTAN; EC=3.2.2.9; AltName: Full=5-methylthioadenosine nucleosidase; Short=MTA nucleosidase; AltName: Full=S-adenosylhomocysteine nucleosidase; Short=AdoHcy nucleosidase; Short=SAH nucleosidase; Short=SRH nucleosidase; | chromosome | CDS | 1201325 | 687 | - | 0.3246 |
nrdD | SERP2183 | anaerobic ribonucleoside-triphosphate reductase | SubName: Full=Anaerobic ribonucleoside-triphosphate reductase; EC=1.17.4.2; | chromosome | CDS | 2215661 | 1851 | - | 0.351702 |
nrdE | SERP0397 | ribonucleoside-diphosphate reductase 2, alpha subunit | RecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; | chromosome | CDS | 398490 | 2106 | + | 0.320513 |
nrdF-1 | SERP0398 | ribonucleoside-diphosphate reductase 2, beta subunit | SubName: Full=Ribonucleoside-diphosphate reductase 2, beta subunit; EC=1.17.4.1; | chromosome | CDS | 400714 | 969 | + | 0.313726 |
nrdF-2 | SERP1510 | ribonucleoside-diphosphate reductase 2, beta subunit | SubName: Full=Ribonucleoside-diphosphate reductase 2, beta subunit; EC=1.17.4.1; | chromosome | CDS | 1572986 | 1023 | - | 0.327468 |
nrdI-1 | SERP0396 | nrdI protein | RecName: Full=Protein NrdI; | chromosome | CDS | 398129 | 399 | + | 0.330827 |
nrdI-2 | SERP1515 | nrdI protein | SubName: Full=NrdI protein; | chromosome | CDS | 1578956 | 414 | - | 0.335749 |
nupC | SERP0161 | nucleoside permease NupC | SubName: Full=Nucleoside permease NupC; | chromosome | CDS | 165575 | 1215 | - | 0.328395 |
pbuX | SERP0068 | xanthine permease | SubName: Full=Xanthine permease; | chromosome | CDS | 55779 | 1269 | + | 0.345154 |
pdp | SERP1744 | pyrimidine-nucleoside phosphorylase | RecName: Full=Pyrimidine-nucleoside phosphorylase; Short=PYNP; EC=2.4.2.2; | chromosome | CDS | 1783289 | 1302 | - | 0.375576 |
prsA | SERP0138 | ribose-phosphate pyrophosphokinase | RecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; Short=P-Rib-PP synthase; Short=PRPP synthase; | chromosome | CDS | 128259 | 966 | + | 0.359213 |
purA | SERP2536 | adenylosuccinate synthetase | RecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; | chromosome | CDS | 2592839 | 1284 | - | 0.389408 |
purB | SERP1446 | adenylosuccinate lyase | RecName: Full=Adenylosuccinate lyase; Short=ASL; EC=4.3.2.2; AltName: Full=Adenylosuccinase; Short=ASase; | chromosome | CDS | 1511231 | 1296 | - | 0.349537 |
purC | SERP0651 | phosphoribosylaminoimidazole-succinocarboxamidesynthase | RecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; | chromosome | CDS | 645802 | 705 | + | 0.304965 |
purD | SERP0659 | phosphoribosylamine--glycine ligase | RecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; | chromosome | CDS | 654195 | 1242 | + | 0.358293 |
purE | SERP0649 | phosphoribosylaminoimidazole carboxylase, catalytic subunit | RecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; | chromosome | CDS | 644205 | 483 | + | 0.380952 |
purF | SERP0655 | amidophosphoribosyltransferase | RecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; Short=GPATase; Flags: Precursor; | chromosome | CDS | 649600 | 1485 | + | 0.36229 |
purH | SERP0658 | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | RecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; | chromosome | CDS | 652691 | 1479 | + | 0.344151 |
purK | SERP0650 | phosphoribosylaminoimidazole carboxylase, ATPase subunit | RecName: Full=N5-carboxyaminoimidazole ribonucleotide synthase; Short=N5-CAIR synthase; EC=6.3.4.18; AltName: Full=5-(carboxyamino)imidazole ribonucleotide synthetase; | chromosome | CDS | 644674 | 1128 | + | 0.332447 |
purL | SERP0654 | phosphoribosylformylglycinamidine synthase II | RecName: Full=Phosphoribosylformylglycinamidine synthase 2; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase II; Short=FGAM synthase II; | chromosome | CDS | 647432 | 2190 | + | 0.358447 |
purM | SERP0656 | phosphoribosylformylglycinamidine cyclo-ligase | RecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; | chromosome | CDS | 651077 | 1032 | + | 0.348837 |
purN | SERP0657 | phosphoribosylglycinamide formyltransferase | RecName: Full=Phosphoribosylglycinamide formyltransferase; EC=2.1.2.2; AltName: Full=5-phosphoribosylglycinamide transformylase; AltName: Full=GAR transformylase; Short=GART; | chromosome | CDS | 652108 | 567 | + | 0.33157 |
purQ | SERP0653 | phosphoribosylformylglycinamidine synthase I | RecName: Full=Phosphoribosylformylglycinamidine synthase 1; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase I; Short=FGAM synthase I; | chromosome | CDS | 646768 | 672 | + | 0.35119 |
purR | SERP0134 | pur operon repressor | SubName: Full=Pur operon repressor; | chromosome | CDS | 124556 | 825 | + | 0.339394 |
purS | SERP0652 | phosphoribosylformylglycinamidine synthase, PurS protein | SubName: Full=Phosphoribosylformylglycinamidine synthase, PurS protein; | chromosome | CDS | 646506 | 261 | + | 0.329502 |
pyrB | SERP0766 | aspartate carbamoyltransferase | RecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; | chromosome | CDS | 764258 | 882 | + | 0.329932 |
pyrC | SERP0767 | dihydroorotase | RecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; | chromosome | CDS | 765157 | 1278 | + | 0.346635 |
pyrD | SERP2144 | dihydroorotate dehydrogenase | SubName: Full=Dihydroorotate dehydrogenase; EC=1.3.98.1; | chromosome | CDS | 2171689 | 1065 | + | 0.331455 |
pyrE | SERP0771 | orotate phosphoribosyltransferase | RecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; | chromosome | CDS | 771429 | 612 | + | 0.351307 |
pyrF | SERP0770 | orotidine 5'-phosphate decarboxylase | RecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; | chromosome | CDS | 770736 | 693 | + | 0.347763 |
pyrG | SERP1734 | CTP synthase | RecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; | chromosome | CDS | 1772905 | 1608 | - | 0.343905 |
pyrH | SERP0825 | uridylate kinase | RecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; | chromosome | CDS | 829440 | 723 | + | 0.365145 |
pyrR | SERP0764 | pyrimidine operon regulatory protein | RecName: Full=Bifunctional protein PyrR; Includes: RecName: Full=Pyrimidine operon regulatory protein; Includes: RecName: Full=Uracil phosphoribosyltransferase; Short=UPRTase; EC=2.4.2.9; | chromosome | CDS | 762165 | 528 | + | 0.348485 |
tdk | SERP1726 | thymidine kinase | RecName: Full=Thymidine kinase; EC=2.7.1.21; | chromosome | CDS | 1763162 | 600 | - | 0.376667 |
thyA-1 | SERP1003 | thymidylate synthase | RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; | chromosome | CDS | 1017520 | 957 | - | 0.321839 |
thyA-2 | SERP1582 | thymidylate synthase | RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; | chromosome | CDS | 1611291 | 957 | - | 0.320794 |
tmk | SERP0120 | thymidylate kinase | RecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; | chromosome | CDS | 113038 | 612 | + | 0.321895 |
udk | SERP1175 | uridine kinase | RecName: Full=Uridine kinase; EC=2.7.1.48; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase; | chromosome | CDS | 1209566 | 624 | - | 0.338141 |
upp | SERP1718 | uracil phosphoribosyltransferase | RecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; | chromosome | CDS | 1757086 | 630 | - | 0.374603 |
uraA | SERP0765 | uracil permease | SubName: Full=Uracil permease; | chromosome | CDS | 762940 | 1293 | + | 0.343387 |
xpt | SERP0067 | xanthine phosphoribosyltransferase | RecName: Full=Xanthine phosphoribosyltransferase; Short=XPRTase; EC=2.4.2.22; | chromosome | CDS | 55201 | 579 | + | 0.34715 |