Gene list
Applied filters:
COG category: Defense mechanisms
Gene type: CDS
Gene type: CDS
Gene type: CDS
Genomic element: chromosome 1
Number of genes found: 51
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Photobacterium profundum, ss9 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | PBPRA1313 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1486722 | 1035 | - | 0.329469 |
NA | PBPRA2780 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 3225000 | 561 | + | 0.376114 |
NA | PBPRA1660 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1889299 | 1653 | + | 0.412583 |
NA | PBPRA1661 | hypothetical ABC transporterATP-binding/transmembrane protein | SubName: Full=Hypothetical ABC transporterATP-binding/transmembrane protein; | chromosome 1 | CDS | 1890944 | 1689 | + | 0.428064 |
NA | PBPRA0195 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 201484 | 1800 | + | 0.401667 |
NA | PBPRA1924 | putative ABC transporter, ATP-binding protein | SubName: Full=Putative ABC transporter, ATP-binding protein; | chromosome 1 | CDS | 2208825 | 2067 | + | 0.407837 |
ACRD | PBPRA2127 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 2446619 | 243 | + | 0.419753 |
AGR_PAT_ | PBPRA1553 | putative ABC transporter, ATP-binding protein | SubName: Full=Putative ABC transporter, ATP-binding protein; | chromosome 1 | CDS | 1762362 | 678 | + | 0.429204 |
C0129 | PBPRA3198 | putative AmpD protein | SubName: Full=Putative AmpD protein; | chromosome 1 | CDS | 3634275 | 558 | - | 0.456989 |
DINF | PBPRA0175 | putative DNA-damage-inducible protein F | SubName: Full=Putative DNA-damage-inducible protein F; | chromosome 1 | CDS | 179146 | 1350 | + | 0.451852 |
ECS1867 | PBPRA2445 | putative ABC-type antimicrobial peptide transport system, ATPase component | SubName: Full=Putative ABC-type antimicrobial peptide transport system, ATPase component; | chromosome 1 | CDS | 2830394 | 825 | + | 0.42303 |
ECS5306 | PBPRA1802 | hypothetical Type I restriction enzyme EcoEIspecificity protein (S protein) | SubName: Full=Hypothetical Type I restriction enzyme EcoEIspecificity protein (S protein); | chromosome 1 | CDS | 2075105 | 1656 | - | 0.395531 |
ECS5308 | PBPRA1804 | putative type I restriction enzyme R protein | SubName: Full=Putative type I restriction enzyme R protein; | chromosome 1 | CDS | 2078558 | 2472 | - | 0.434061 |
FNV1836 | PBPRA0886 | putative type I restriction enzyme HsdR | SubName: Full=Putative type I restriction enzyme HsdR; | chromosome 1 | CDS | 980703 | 3051 | + | 0.402819 |
MLL2715 | PBPRA1567 | putative hemolysin secretion ATP-binding protein | SubName: Full=Putative hemolysin secretion ATP-binding protein; | chromosome 1 | CDS | 1781766 | 1713 | + | 0.42732 |
MLL7993 | PBPRA1334 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1505088 | 624 | + | 0.399038 |
PA3304 | PBPRA1560 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome 1 | CDS | 1772441 | 897 | + | 0.415831 |
PA4065 | PBPRA0372 | putative ABC-type antimicrobial peptide transport system, permease component | SubName: Full=Putative ABC-type antimicrobial peptide transport system, permease component; | chromosome 1 | CDS | 372633 | 1260 | - | 0.401587 |
PD0499 | PBPRA0247 | putative toxin transporter | SubName: Full=Putative toxin transporter; | chromosome 1 | CDS | 252068 | 2136 | + | 0.331461 |
PD2072 | PBPRA0882 | putative DNA methylase HsdM | SubName: Full=Putative DNA methylase HsdM; | chromosome 1 | CDS | 973507 | 2382 | + | 0.403023 |
PLU3858 | PBPRA0972 | Putative ATP-binding component of a transport system | SubName: Full=Putative ATP-binding component of a transport system; | chromosome 1 | CDS | 1075715 | 1779 | + | 0.426644 |
PM1132 | PBPRA0087 | putative multidrug resistance protein | SubName: Full=Putative multidrug resistance protein; | chromosome 1 | CDS | 89116 | 3117 | - | 0.43343 |
PP4741 | PBPRA1803 | putative type I restriction enzyme EcoEI Mprotein | SubName: Full=Putative type I restriction enzyme EcoEI Mprotein; | chromosome 1 | CDS | 2076886 | 1503 | - | 0.435795 |
PSPTO391 | PBPRA2033 | Conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 2346568 | 354 | - | 0.38983 |
RSC0165 | PBPRA2311 | putative transmembrane protein | SubName: Full=Putative transmembrane protein; | chromosome 1 | CDS | 2660450 | 1125 | - | 0.460444 |
SAV7021 | PBPRA0438 | putative undecaprenol kinase | RecName: Full=Undecaprenyl-diphosphatase; EC=3.6.1.27; AltName: Full=Bacitracin resistance protein; AltName: Full=Undecaprenyl pyrophosphate phosphatase; | chromosome 1 | CDS | 451429 | 804 | + | 0.419154 |
SO0702 | PBPRA3389 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 3832797 | 1410 | + | 0.44539 |
SO1918 | PBPRA1215 | hypothetical MATE efflux family protein | SubName: Full=Hypothetical MATE efflux family protein; | chromosome 1 | CDS | 1365220 | 1350 | + | 0.427407 |
SO3279 | PBPRA2129 | hypothetical AcrB/AcrD/AcrF family protein | SubName: Full=Hypothetical AcrB/AcrD/AcrF family protein; | chromosome 1 | CDS | 2447503 | 2799 | + | 0.4398 |
STY0985 | PBPRA2385 | putative transport ATP-binding protein MsbA | RecName: Full=Lipid A export ATP-binding/permease protein MsbA; EC=3.6.3.-; | chromosome 1 | CDS | 2753215 | 1758 | - | 0.421502 |
STY1258 | PBPRA2389 | putative ABC transporter ATP-binding protein | RecName: Full=Lipoprotein-releasing system ATP-binding protein LolD; EC=3.6.3.-; | chromosome 1 | CDS | 2759755 | 750 | - | 0.422667 |
T1609 | PBPRA2444 | putative peptide ABC transporter, ATP-binding protein | SubName: Full=Putative peptide ABC transporter, ATP-binding protein; | chromosome 1 | CDS | 2829399 | 999 | + | 0.446446 |
VAG | PBPRA1552 | Conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1760716 | 1368 | + | 0.421053 |
VC1629 | PBPRA1554 | Conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1763020 | 2460 | + | 0.438211 |
VPA0560 | PBPRA0650 | putative ABC transporter ATP-binding protein | SubName: Full=Putative ABC transporter ATP-binding protein; | chromosome 1 | CDS | 714004 | 699 | - | 0.466381 |
VPA0871 | PBPRA0373 | putative ABC transporter | SubName: Full=Putative ABC transporter; | chromosome 1 | CDS | 373889 | 696 | - | 0.406609 |
VV21320 | PBPRA0422 | putative Cation/multidrug efflux pump | SubName: Full=Putative Cation/multidrug efflux pump; | chromosome 1 | CDS | 430190 | 3111 | + | 0.436516 |
XAC1547 | PBPRA2038 | hypothetical ABC transporter ATP-binding protein | SubName: Full=Hypothetical ABC transporter ATP-binding protein; | chromosome 1 | CDS | 2354543 | 858 | - | 0.367133 |
XCC3169 | PBPRA2721 | putative multidrug resistance protein | SubName: Full=Putative multidrug resistance protein; | chromosome 1 | CDS | 3156748 | 3132 | - | 0.446999 |
XF2722 | PBPRA0883 | hypothetical type I restriction-modification system specificity determinant | SubName: Full=Hypothetical type I restriction-modification system specificity determinant; | chromosome 1 | CDS | 975891 | 1314 | + | 0.366819 |
Y0781 | PBPRA3177 | putative permease | SubName: Full=Putative permease; | chromosome 1 | CDS | 3605274 | 771 | - | 0.416342 |
Y1975 | PBPRA2443 | putative peptide ABC transporter, permease protein | SubName: Full=Putative peptide ABC transporter, permease protein; | chromosome 1 | CDS | 2828511 | 888 | + | 0.420045 |
Y1976 | PBPRA2442 | putative peptide ABC transporter, permease protein | SubName: Full=Putative peptide ABC transporter, permease protein; | chromosome 1 | CDS | 2827562 | 963 | + | 0.423676 |
Y3759 | PBPRA2406 | putative AcrB, Cation/multidrug efflux pump | SubName: Full=Putative AcrB, Cation/multidrug efflux pump; | chromosome 1 | CDS | 2779283 | 3069 | - | 0.424568 |
Y3759 | PBPRA2318 | hypothetical transporter, AcrB/D/F family | SubName: Full=Hypothetical transporter, AcrB/D/F family; | chromosome 1 | CDS | 2666739 | 3105 | - | 0.42029 |
YPO2392 | PBPRA2180 | putative multidrug resistance protein NorM(Na+/drug antiporter) | RecName: Full=Multidrug resistance protein NorM; AltName: Full=Multidrug-efflux transporter; AltName: Full=Na(+)/drug antiporter; | chromosome 1 | CDS | 2506047 | 1371 | + | 0.422319 |
YPO3406 | PBPRA3178 | hypothetical ABC transporterATP-binding protein yadG | SubName: Full=Hypothetical ABC transporterATP-binding protein yadG; | chromosome 1 | CDS | 3606041 | 939 | - | 0.4164 |
Z0557 | PBPRA0971 | Putative transport ATP-binding protein MsbA | SubName: Full=Putative transport ATP-binding protein MsbA; | chromosome 1 | CDS | 1073973 | 1743 | + | 0.458979 |
Z1014 | PBPRA2312 | putative ABC-type multidrug transport system, ATPase component | SubName: Full=Putative ABC-type multidrug transport system, ATPase component; | chromosome 1 | CDS | 2661574 | 1035 | - | 0.439614 |
Z1852 | PBPRA1352 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1522504 | 321 | + | 0.507788 |
Z1852 | PBPRA1343 | Conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1512990 | 321 | + | 0.482866 |