Gene list
Applied filters:
COG category: Intracellular trafficking and secretion
Gene type: CDS
Gene type: CDS
Gene type: CDS
Genomic element: chromosome
Number of genes found: 82
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Rhodopseudomonas palustris HaA2, HaA2 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | RPB_0362 | signal recognition particle-docking protein FtsY | RecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; | chromosome | CDS | 404397 | 948 | + | 0.674051 |
NA | RPB_2421 | DNA processing protein DprA, putative | SubName: Full=DNA processing protein DprA, putative; | chromosome | CDS | 2775650 | 1137 | - | 0.720317 |
NA | RPB_2743 | Sec-independent protein translocase TatC | RecName: Full=Sec-independent protein translocase protein TatC; | chromosome | CDS | 3127592 | 819 | - | 0.632479 |
NA | RPB_0901 | outer membrane autotransporter | SubName: Full=Outer membrane autotransporter; Flags: Precursor; | chromosome | CDS | 1038118 | 1917 | + | 0.662493 |
NA | RPB_3779 | flagellar biosynthetic protein FliP | SubName: Full=Flagellar biosynthetic protein FliP; Flags: Precursor; | chromosome | CDS | 4313089 | 765 | + | 0.648366 |
NA | RPB_1091 | Peptidase S49 | SubName: Full=Peptidase S49; | chromosome | CDS | 1251941 | 909 | + | 0.678768 |
NA | RPB_3126 | Filamentous haemagglutinin-like protein | SubName: Full=Filamentous haemagglutinin-like protein; | chromosome | CDS | 3560155 | 13044 | - | 0.666897 |
NA | RPB_3773 | flagellar biosynthetic protein FliR | RecName: Full=Flagellar biosynthetic protein fliR; | chromosome | CDS | 4309284 | 852 | - | 0.651408 |
NA | RPB_3911 | ATPase FliI/YscN | SubName: Full=ATPase FliI/YscN; EC=3.6.3.15; | chromosome | CDS | 4463463 | 1326 | - | 0.678733 |
NA | RPB_2793 | Haemagluttinin-like protein | SubName: Full=Haemagluttinin-like protein; Flags: Precursor; | chromosome | CDS | 3182228 | 1806 | - | 0.69103 |
NA | RPB_2207 | Filamentous haemagglutinin-like protein | SubName: Full=Filamentous haemagglutinin-like protein; Flags: Precursor; | chromosome | CDS | 2499290 | 12150 | + | 0.671358 |
NA | RPB_1009 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1156504 | 1332 | + | 0.648649 |
NA | RPB_2791 | preprotein translocase, SecG subunit | SubName: Full=Protein translocase subunit secG; | chromosome | CDS | 3180828 | 393 | - | 0.676845 |
NA | RPB_0530 | preprotein translocase, SecA subunit | RecName: Full=Protein translocase subunit SecA; | chromosome | CDS | 593320 | 2841 | + | 0.648363 |
NA | RPB_0399 | protein-export protein SecB | RecName: Full=Protein-export protein SecB; | chromosome | CDS | 443737 | 477 | - | 0.66457 |
NA | RPB_4540 | Protein of unknown function DUF107 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 5134462 | 462 | - | 0.701299 |
NA | RPB_1721 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 1963173 | 498 | - | 0.650602 |
NA | RPB_1655 | MotA/TolQ/ExbB proton channel | SubName: Full=MotA/TolQ/ExbB proton channel; Flags: Precursor; | chromosome | CDS | 1885251 | 861 | + | 0.681765 |
NA | RPB_0804 | Hemolysin-type calcium-binding region | SubName: Full=Hemolysin-type calcium-binding region; | chromosome | CDS | 910133 | 8658 | + | 0.670825 |
NA | RPB_1275 | Flagellar motor switch FliN | SubName: Full=Flagellar motor switch FliN; | chromosome | CDS | 1461657 | 351 | + | 0.65812 |
NA | RPB_1633 | Type I secretion outer membrane protein, TolC | SubName: Full=Type I secretion outer membrane protein, TolC; Flags: Precursor; | chromosome | CDS | 1839424 | 1560 | + | 0.623077 |
NA | RPB_1656 | Biopolymer transport protein ExbD/TolR | SubName: Full=Biopolymer transport protein ExbD/TolR; | chromosome | CDS | 1886118 | 456 | + | 0.666667 |
NA | RPB_3460 | Phage conserved hypothetical protein BR0599 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3969792 | 921 | - | 0.71987 |
NA | RPB_2732 | protein-export membrane protein SecD | RecName: Full=Protein translocase subunit SecD; Flags: Precursor; | chromosome | CDS | 3115572 | 1602 | - | 0.66417 |
NA | RPB_4181 | lipoprotein signal peptidase | RecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; | chromosome | CDS | 4753652 | 498 | - | 0.636546 |
NA | RPB_1785 | Flp pilus assembly CpaB | SubName: Full=Flp pilus assembly CpaB; Flags: Precursor; | chromosome | CDS | 2047239 | 798 | - | 0.676692 |
NA | RPB_3774 | flagellar biosynthetic protein FliQ | SubName: Full=Flagellar biosynthetic protein FliQ; | chromosome | CDS | 4310152 | 264 | - | 0.628788 |
NA | RPB_3775 | flagellar hook-basal body complex protein FliE subunit | RecName: Full=Flagellar hook-basal body complex protein FliE; | chromosome | CDS | 4310565 | 306 | - | 0.669935 |
NA | RPB_1781 | type II secretion system protein E | SubName: Full=Type II secretion system protein E; | chromosome | CDS | 2042291 | 1404 | - | 0.673789 |
NA | RPB_1310 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 1492892 | 798 | + | 0.660401 |
NA | RPB_1787 | Flp/Fap pilin component | SubName: Full=Flp/Fap pilin component; | chromosome | CDS | 2049018 | 165 | - | 0.587879 |
NA | RPB_0482 | haemagglutinin-like protein | SubName: Full=Haemagglutinin-like protein; Flags: Precursor; | chromosome | CDS | 530172 | 12024 | + | 0.682136 |
NA | RPB_2275 | SecE subunit of protein translocation complex | RecName: Full=Protein translocase subunit SecE; | chromosome | CDS | 2625559 | 192 | + | 0.567708 |
NA | RPB_0919 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1062834 | 957 | - | 0.597701 |
NA | RPB_2611 | Peptidase S26A, signal peptidase I | SubName: Full=Signal peptidase I. Serine peptidase. MEROPS family S26A; EC=3.4.21.89; | chromosome | CDS | 2995098 | 759 | + | 0.620553 |
NA | RPB_1779 | type II secretion system protein | SubName: Full=Type II secretion system protein; | chromosome | CDS | 2040319 | 975 | - | 0.646154 |
NA | RPB_1812 | Twin-arginine translocation pathway signal | RecName: Full=Protein TolB; Flags: Precursor; | chromosome | CDS | 2071433 | 1350 | + | 0.66963 |
NA | RPB_2240 | RND efflux system, outer membrane lipoprotein, NodT | SubName: Full=RND efflux system, outer membrane lipoprotein, NodT; | chromosome | CDS | 2566836 | 1557 | + | 0.67052 |
NA | RPB_1638 | VCBS | SubName: Full=VCBS; | chromosome | CDS | 1852146 | 15285 | + | 0.650703 |
NA | RPB_3494 | Flp/Fap pilin component | SubName: Full=Flp/Fap pilin component; | chromosome | CDS | 3998460 | 165 | - | 0.6 |
NA | RPB_1790 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2050853 | 621 | + | 0.648953 |
NA | RPB_2903 | RND efflux system, outer membrane lipoprotein, NodT | SubName: Full=RND efflux system, outer membrane lipoprotein, NodT; | chromosome | CDS | 3309023 | 1449 | - | 0.673568 |
NA | RPB_2214 | Filamentous haemagglutinin-like protein | SubName: Full=Filamentous haemagglutinin-like protein; | chromosome | CDS | 2515895 | 12093 | + | 0.665592 |
NA | RPB_3661 | Haemagluttinin-like protein | SubName: Full=Haemagluttinin-like protein; Flags: Precursor; | chromosome | CDS | 4202981 | 1257 | + | 0.682578 |
NA | RPB_1788 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 2049559 | 495 | + | 0.652525 |
NA | RPB_0762 | putative flagellar protein FliS | SubName: Full=Putative flagellar protein FliS; | chromosome | CDS | 856192 | 396 | + | 0.674242 |
NA | RPB_2027 | AsmA | SubName: Full=AsmA; Flags: Precursor; | chromosome | CDS | 2305067 | 3822 | + | 0.730246 |
NA | RPB_2220 | MotA/TolQ/ExbB proton channel | SubName: Full=MotA/TolQ/ExbB proton channel; Flags: Precursor; | chromosome | CDS | 2533695 | 2016 | + | 0.662202 |
NA | RPB_1784 | type II and III secretion system protein | SubName: Full=Type II and III secretion system protein; Flags: Precursor; | chromosome | CDS | 2045786 | 1440 | - | 0.665972 |
NA | RPB_4110 | Glycosyl transferase, family 2 | SubName: Full=Glycosyl transferase, family 2; Flags: Precursor; | chromosome | CDS | 4680509 | 1881 | - | 0.630516 |
NA | RPB_2143 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 2431712 | 1488 | - | 0.65121 |
NA | RPB_1780 | type II secretion system protein | SubName: Full=Type II secretion system protein; Flags: Precursor; | chromosome | CDS | 2041305 | 975 | - | 0.652308 |
NA | RPB_3544 | Parallel beta-helix repeat | SubName: Full=Parallel beta-helix repeat; Flags: Precursor; | chromosome | CDS | 4054687 | 1356 | + | 0.702802 |
NA | RPB_2234 | Filamentous haemagglutinin-like protein | SubName: Full=Filamentous haemagglutinin-like protein; Flags: Precursor; | chromosome | CDS | 2545909 | 12030 | + | 0.663092 |
NA | RPB_1242 | Biopolymer transport protein ExbD/TolR | SubName: Full=Biopolymer transport protein ExbD/TolR; | chromosome | CDS | 1421316 | 441 | + | 0.689342 |
NA | RPB_2219 | hemolysin activation/secretion protein | SubName: Full=Hemolysin activation/secretion protein; | chromosome | CDS | 2531968 | 1728 | + | 0.638889 |
NA | RPB_2241 | Type I secretion outer membrane protein, TolC | SubName: Full=Type I secretion outer membrane protein, TolC; Flags: Precursor; | chromosome | CDS | 2568705 | 1575 | + | 0.645079 |
NA | RPB_2731 | SecF protein | RecName: Full=Protein-export membrane protein SecF; Flags: Precursor; | chromosome | CDS | 3114443 | 1104 | - | 0.638587 |
NA | RPB_1810 | Biopolymer transport protein ExbD/TolR | SubName: Full=Biopolymer transport protein ExbD/TolR; | chromosome | CDS | 2069866 | 474 | + | 0.660338 |
NA | RPB_2733 | preprotein translocase, YajC subunit | SubName: Full=Protein translocase subunit yajC; | chromosome | CDS | 3117216 | 429 | - | 0.636364 |
NA | RPB_1272 | flagellar M-ring protein FliF | RecName: Full=Flagellar M-ring protein; | chromosome | CDS | 1458328 | 1599 | + | 0.671044 |
NA | RPB_3772 | flagellar biosynthetic protein FlhB | SubName: Full=Flagellar biosynthetic protein FlhB; | chromosome | CDS | 4308181 | 1077 | - | 0.645311 |
NA | RPB_2744 | twin-arginine translocation protein TatB | RecName: Full=Sec-independent protein translocase protein TatB; | chromosome | CDS | 3128407 | 567 | - | 0.675485 |
NA | RPB_0639 | signal peptide peptidase SppA, 36K type | SubName: Full=Signal peptide peptidase A. Serine peptidase. MEROPS family S49; Flags: Precursor; | chromosome | CDS | 723235 | 966 | - | 0.670807 |
NA | RPB_3558 | Type I secretion outer membrane protein, TolC | SubName: Full=Type I secretion outer membrane protein, TolC; Flags: Precursor; | chromosome | CDS | 4071544 | 1419 | + | 0.6716 |
NA | RPB_1274 | FlbE protein | SubName: Full=FlbE protein; | chromosome | CDS | 1461021 | 618 | + | 0.687702 |
NA | RPB_2563 | Endopeptidase Clp | RecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; | chromosome | CDS | 2941340 | 639 | + | 0.636933 |
NA | RPB_1018 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 1166529 | 492 | + | 0.668699 |
NA | RPB_2894 | Type I secretion outer membrane protein, TolC | SubName: Full=Type I secretion outer membrane protein, TolC; Flags: Precursor; | chromosome | CDS | 3295455 | 1383 | - | 0.655098 |
NA | RPB_2745 | twin-arginine translocation protein, TatA/E family | RecName: Full=Sec-independent protein translocase protein TatA; | chromosome | CDS | 3129208 | 240 | - | 0.6 |
NA | RPB_2315 | SecY protein | RecName: Full=Protein translocase subunit SecY; | chromosome | CDS | 2663752 | 1332 | + | 0.632132 |
NA | RPB_2090 | MotA/TolQ/ExbB proton channel | SubName: Full=MotA/TolQ/ExbB proton channel; Flags: Precursor; | chromosome | CDS | 2376336 | 942 | + | 0.68896 |
NA | RPB_2372 | Surface presentation of antigens (SPOA) protein | SubName: Full=Surface presentation of antigens (SPOA) protein; | chromosome | CDS | 2726518 | 243 | + | 0.613169 |
NA | RPB_4492 | Protein of unknown function DUF1465 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 5079971 | 516 | - | 0.666667 |
NA | RPB_0353 | signal recognition particle protein | RecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; | chromosome | CDS | 395757 | 1545 | - | 0.678964 |
NA | RPB_2221 | Biopolymer transport protein ExbD/TolR | SubName: Full=Biopolymer transport protein ExbD/TolR; | chromosome | CDS | 2535715 | 405 | + | 0.590123 |
NA | RPB_0683 | 60 kDa inner membrane insertion protein | RecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; | chromosome | CDS | 766782 | 1890 | - | 0.640741 |
NA | RPB_2091 | Biopolymer transport protein ExbD/TolR | SubName: Full=Biopolymer transport protein ExbD/TolR; | chromosome | CDS | 2377281 | 450 | + | 0.642222 |
NA | RPB_1241 | MotA/TolQ/ExbB proton channel | SubName: Full=MotA/TolQ/ExbB proton channel; Flags: Precursor; | chromosome | CDS | 1420512 | 801 | + | 0.714107 |
NA | RPB_4593 | Peptidase S26A, signal peptidase I | RecName: Full=Signal peptidase I; EC=3.4.21.89; | chromosome | CDS | 5187438 | 771 | + | 0.682231 |
NA | RPB_1809 | MotA/TolQ/ExbB proton channel | SubName: Full=MotA/TolQ/ExbB proton channel; | chromosome | CDS | 2069116 | 714 | + | 0.644258 |
NA | RPB_3906 | flagellar biosynthesis protein FlhA | SubName: Full=Flagellar biosynthesis protein FlhA; | chromosome | CDS | 4458425 | 2130 | + | 0.669484 |