Gene list
Applied filters:
COG category: Signal transduction mechanisms
Gene type: CDS
Gene type: CDS
Gene type: CDS
Genomic element: chromosome
Number of genes found: 410
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View as list | ||||
# Pseudomonas fluorescens Pf-5, Pf-5 >PFL_5021 basic amino acid ABC transporter, periplasmic basic amino acid-binding protein MKNLLKVLATGCLFSALASHAVAADKIVFGIALEPYPPFSMKSGNGDWSG FEPELIKALCDRMQAQCPLKEVAWDGLIPALQSSQIDAILNSLSITDERE KVIDFSAPYYQTPAMWVADQSLELVTTPEGLKGKLIGVQGSTSNATFAKT YYGKTSTLRYYTTQDDMIADLQSGRIDVMLADALTIEPILKTAAGAGLAD KGLAPKDPLFGSGIGVGLRKGDSALQQRINTALASLKADGTYDKIRSRYF SVDISAN >PFL_0489 methyl-accepting chemotaxis protein MVPTMSLRNMNIAPRAFLGFAMIGGLMLILGVFALNQMSKIRGAAEDITS SSVPSIKSLDEFTQLTLRLRVLSYRLLVNREPDVQQKTIELLEMRNQQIR AAQVIYEKFITSPEEKSAYEQYLQLLGQYRQIEERMKSLSRNNQVDELRN LLNTELLNNSEAMNTVLNRLLEINTQQTVDTNQQAAEQYSSAFNLVVALL VLATGLTFLFAWLLTRSITQPIANALGAAEEIAEGNLTRPIKVDGSDEAG RLLQAMAKMQEKLRDTLQRISGSATQLASAAEELNSVTEESARGLTQQNN EIEQAATAVNEMTSAVEEVARNAVSTSEASKNATASAGDGRDLVQETVSA IERMSSDVQGTASLIGDLANESRDIGKVLDVIRGLADQTNLLALNAAIEA ARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQSGTEHAVDSMR NSTERAESTLNIARGAGLSLDTINSAIIEINERNLVIASAAEEQAQVARE VDRNLVNIRDLSVQSSTGANQTSAASNELSRLAVDLNGMVARFRL >PFL_1403 sensory box-containing diguanylate cyclase, putative MATKNSAPLASFIDLLLDAVCAVDVEGRFVFVSAACERVFGYTADELIGR PMIELVHPADRERTLQAAREIMGGVPKPNFENRYVRKDGRVAHILWSARW SEVDQLRIAVARDITERKQAESRQAALYAISEAAHATEDLLVLFRHVHRI IGEWLPALNCSLALYDERSASLSFPYHVDDCEGSPELPGTLIERFCVEVL QCGQPLLLAPECPVNRVLWSEFAAIQGSRCWLGVPLNSQKGTIGVLMVKS APGTESYSEQDQELLQYVSAQLAAAIERKQLHARLHYMAEYDQLTHLPNR ELLRERLRSALARARRESGRMALLYVDLDKFKEVNDTCGHAVGDMLLQAV ANRLKGCVRETDTVARIGGDEFVILLESVQHSEDAQRVAEKIRRTLGEPL RLDGHSLNILPSIGIGLYPEHGLEEKQLFKHADEAMYAVKRAQKSRSNA >PFL_2566 sigma-54 dependent transcriptional regulator MSLIATDLVPPPMSALVSYLEHDQQPTIVLDTDYNIIAANTAYQRQFGVA GKPHVGAKCYRVSHQFAVPCDQAGEHCPMRKAHDSRVPERMLHIHHTPRG PEHVDVELRPIIGQDGTVVAYVERLSSVAVASVQPQQKGLVGRSPAFNEA LGALQRAAPAPIPVLLQGESGTGKELFARALHDGSPRASGPLVVVDCTGL TESLLESELFGYEKGAFTGALQRKIGLAEAAHGGTLFLDEIGEVPLAMQV KLLRLIESGSFRPVGSLRTVHSDFRLVAATHKPLKEMVAAGTFRQDLYYR ISAFPIRLPALRERSDDLPLLIDSLLRRLDPGVVPRVDPQALAQLSLYTY PGNIRELRNILERARLFSDDGVIRLADLPPELRSTPAPAPPGRRRGNKDL EQLAHALEVFEGSRSELARALGLSERTLYRRLKALGL >PFL_0354 conserved hypothetical protein MKSFSMSVLSGVIAVLLLAAPVSVRSASTSNEPIDPAGVQLEPLQQNGIS YVSGGIGLDESRAIQQAKGYNLHMTFSVGSGNEYTSDIDVLIQNPQGHQL LSLSGVGPIVFVQLPAGRYQVITTRKGLEQRSMVDMGVATMRDLNVHWNN GY >PFL_4475 DNA-binding response regulator MEQEAWQVLIVEDDQRLAELTREYLESNGLQVAIEGNGARAAARIIAEQP DLVILDLMLPGEDGLSICRKVRDRYDGVILMLTARTDDMDQIMGLDLGAD DYVCKPVRPRLLLARIQALLRRSEAPEPAVEKTRRLQFGPLVVDNALREA WLSDAGIELTSAEFDLLWLLVANAGRILSREEIFTALRGIGYDGQDRSID VRISRIRPKIGDDPEHPRLIKTIRSKGYLFVPEAAADMRS >PFL_2252 arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein MNKFALFGALALSLFSFTASADEAKPIRIGIEAGYPPFSMKTPDGKLTGF DVDLGNALCEQMQAKCTWVEQEFDGLIPALKVKKIDAILSSMTITDDRKK NVDFTIKYYHTPARFVMKAGTSIKDPLTELKGKKVGVLRASTHDRFATEV LVPAGIDLVRYGSQQEANLDMVSGRVDALLADSVNLDDGFLKTDAGKGFA FVGPEYNDPKYFGGGAGIAVRKGDQELAGKFNKAITEIRANGKYKQVQDK YFDFDVYGE >PFL_3764 hypothetical phage protein YPO2108 , putative MAANQAILDATIRHAVFLEQLKSGEVEKFGPFLKEIDRSIRDRLARADLT EYTARRLEVLLQEVDSLLLGIFDRYSEKLNLDLVDIANYEAQFEATSLTR AAPVGVSFEAAVPGAAAIRAAILSNPLSVRGVDGGKLLKSFIDGFTTTER QRLTGAIRQGFFEGQTNFQIIKNIRGTKALNYNDGILATTNRNAGAVVRT AVQHVATQARMETLKENSDVVQAVEWVSTLDSKTTPQCRTLDKHRFKLTE GPRPPIHINCRSTVVAVTRFSKLFAEGATRASIGDDGPQQVRADLSYYEW LMQQPSAFQDKAIGPSRAKLLRDGGLSVVRFNELQLDRNFSPLTLEQMKA LEPLAFEKAGLI >PFL_0188 sensory box-containing diguanylate cyclase, putative MVNKNPHTPSALPQWPEAAQTLMALMHAQGEVARLTEREQLFSSLLVSVN AVLWAFDWDSRQVLYVSPAYERIFGRPAGLLLADCNQWRDSIYPDDLEYA ERSLAQVLEKGAVEDREYRIIDAQGQVRWLSDKCFINRNAEPGQRLIVVG IAEDITEKKQLETELQRLATTDVLTQSSNRRHFFECANREFEQARLQGSS LAFLLLDIDDFKVINDTYGHPEGDIVLQRIAESGRAALRRGDLFGRIGGE EFAAVFPGCTADMARQVAERLQREIQRQNFSHQGQTFTITVSQGLTGLLA EDESLDNLFARADSAMYEAKRQGKNRIITG >PFL_3195 sensor histidine kinase/response regulator MKESSTLLQNLARSLPRLNMGILLGLALLLFATLYWTLERLFDEQNSNVR LHFAQLMENIQEQELFLKRLAARHSIDALSLDAPHHLNLQAFPPTAGQQS PFATPFSLSLSPQQPAAGELPRVFALGLQLSSFYSAFWSGSQHVAPRTFV FKTFGHFDISHPEGNTAPDIGVADQVLHQQLVKSDGFADHQIHWQQYRPP ASEALPTRFLAYINLHEPAPPLDVQGGNDWSVVASLLSLDDLNHLEHTRH WSIYDDFTLIEPSGTALTGDPAPADVLGEGLNFGLQGMIVKVTSQTPQLW TGLYAISYRNYLDYALWAMLSLLALGVGSIACGWAASRWYRNKVVVPAQR AQQCLNESEDFNRVVIDTVPSGLCVVSRDNLQVILQNRQAEQWQGTAQLL SRLAQDRSLIDGGETSLDIDGRYLQVEFVSTRYQRQDVLVCTFNDVTRHV EDARALDRARRSADAANAAKTLFLATMSHEIRTPLYGVLGTLELLGLTRL DSRQSDYLQTIQRSSSTLFQLISDVLDVSRIEAGQMSIDPLEFCPLDMLE DVLHAHAASAQRRGLLFYACIDPNLPDLLLGDAARISQILNNLLSNAIKF TESGRVVLRVRLLELRDQQARIEWQVTDTGIGISAQQQPQLFVPFFQVRD ASNEAGAGLGLAICERLCQMMGGQMQVTSEPGLGSSFSLRLTLRCLPGGL PPLLPWPEGSPVYVRAPVPELLKNTCDWLGRLGVPAHPPPPGWSDEPQTG VLIDMLPRDGLASWPGPCVSAVSGGGSGRLPQATSWQVDAHDIRAIAQAA VLAHQGLPLYQAQHRAGRMGQLNLRILVAKHSPINQAIIKEQLQALGCQV TLSANGKQALEHWQPQRFDIVITDVNMPLMNGYELARELRRRDPQLPIIG VTANALREEGIRCLAAGMNTWIVKPMNLQTLRGHLSKLCPTSTATAAPSI PPAAPSRPPPDTAQGDRIQVTEKMRPLFLSTMHEDLRRLAEALDSGAGKI AAARLHSIAGAMGAVQAAPLAKACAELECRLLEGALTADLQAQARQLMQR LSRLLLPLE >PFL_0954 sensory box protein MINAHLLQRMINASNDGIVVAEQEGEDNIVIYVNPAFERLTGYSADEVLY QDCRFLQSGDRDQPGLEVIRQALRQGRPCREVLRNYRKDGSHFWNELSIT PVFNDSDQLTYFIGVQKDVSVQVKAQQRLLQLEQQLAEVQAELAALKATS GH >PFL_4852 DNA-binding response regulator, LuxR family MKRVLIVDDHPVVRLAVRMLMERHGLEVVAEADNGTDALKLALEYVPDIL ILDIGIPQLDGLEVINRLMSRGMSIKILVLTLQVPGPFSMRCMQAGAAGY VCKQQDITELLSAVRAVLAGYSYFPNEALHTFRSSQGISSEQQMIELLSG RELIVLKQLTNGMSNKEIAEGLCLSNKTISTYKRRLLAKLNARSLVDLIE FAQRHRLI >PFL_0248 cystine ABC transporter, periplasmic cystine binding protein MNFSVLRRNLLIGTLGLALGAGLMGQAVAGEQLQKIKDAGVINVGLEGTY PPFSYVDENGKLTGFEVEFSEALANKLGVKVKLQPTKWDGILAALESKRL DAVVNQVTISEERKKKYDFSIPYTVSGIQALTQKKDEGKFKTAADLGGHK VGVGLGTNYEQWLKDNVPTAIIKTYDDDPTKYQDLRVGRIEAILVDRLAA FELIKKTKDTLVVSGEPFSRQEAGVALRKGEPELLAAVNKAIEELRADGT LKKLSEKYFNADVTQ >PFL_4474 sensor histidine kinase MNSIFLRIYGGMCAALILVALLGVLALHLLNQVRSEQYRERLAHGTFSLM ADNLQPMSEIERRRALAVWERLLGIPLSLKTFSQTDLDSSQRGRVLRGQA LVEQTGPFAARVYRLVSEKEQLLLSAEVQQISEQLARATIYLLADELVRY PVAEQPQRLAALKEAKGFGFDMQLSTLDAADMDEDQRRRVAEGDTVMALG KGGDSIRVFAGLVGTPWVLEIGPLYQMNPYPPQWLVLIAVLGLSLIGLIV YLLVRQLERRLSGLESAATRIAKGSLETRVPARGADSVGRLAAAFNGMAE HLQRLLAIQRELVRAVSHELRTPVARLRFGLEMIASASTDQARQKYLDGM DNDIQDLDRLVDEMLTYARLEQGSPALNFQRIDLDALINQVISELAPLRA NLKVRRGLCLSAAECDGAWVEAEPRYLHRALQNLVGNAMRHAESQVTVSY QVGQLRCRVDVEDDGPGVPEHAWEKIFTPFLRLDDSRTRASGGHGLGLSI VRRIIHWHEGRALISKSKNLGGACFSLSWPRHQEPR >PFL_4777 sensory box histidine kinase MPLRQRLENLPVGQKLLAALLVLLTTVLLVANLTFISAAYWISQESMAPQ ALQTIGRLVSNPTLAIQALNSPEDAEKLLNELDSYTPLRAAALYDGKGQR LAQLQHGERLKLPERYRHIEAWQMTEFRSNQVITLPRPGQAPGHLLLVAT SELPMAFYTGTLTASLGILIFSVLLWLVIARQIKRLITQPIHQLEELSRQ VTREENYALRAARGNHDEIGSLAEAFNTMLSRIEAREQQLKRARDDSQAA YDQAQGLAEETRHTNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSAL IALDEQLYVTQWNQEASALSGTRLDEALNQPIFLAFEPLKPFLPQLKETV EQHTVTKVERVTWFKDEEPKHYALTFYPLMGGAGRGVVIRIDDITQRLSL EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSADLPKNL EHAQQIGVELQTVNRYLESREVPQLLDGIQQAGARAAKIVTHMLSFSRRS NRQMAPCDLPALIDQAVEIASNDFDLAIGFDFKGQAIIRQFDPNLGPVAG TANELEQVLLNLLKNAAQAIHQREDDSEPGRIILRTRLNPPWAEIQVEDN GIGMSENVRKRTFEPFFTTKEIGQGTGLGLSVSYFIITNNHKGQMEVQST RGQGTCFTLRLPLASSQPLVQEPLPLEN >PFL_4181 DNA-binding response regulator MHVLVCEDDELIASGIVAGLTAQGLTVEHVATASAARAMLGVADFDVMVL DLGLPDEDGLKLLKQQRQQGLEIPVLILTARDSVTDRVDGLQAGADDYLL KPFDLRELAARLHTLLRRVAGRSVNLIEHGRLTYDPSTRETLLGGQPVDL SRREQSLLQALLHNRGRVLSSEQLKDSVYGFNDELESNALNVHIHHLRRK LGNGIVETVRGLGYRLGPADGEENR >PFL_0700 response regulator MTSPSSRQQLLLVDDEEDALLELAELLEGEGFCCFTATSVKLALDHLTRH PDIALVITDLRMPEESGLSLIKRLREHTARQHLPVIVMSGHADMDDVSDL LRLQVLDLFRKPIYHVRLLETLNNLFPEPRLHIVGP >PFL_1972 response regulator MQKTSATLLIIDDDEVVRASLAAYLEDSGFSVLQAANGQQGLQVFERDNP DLVICDLRMPQMGGLELIRQVTELSPQTPVIVVSGAGVMNDAVEALRLGA ADYLIKPLEDLAVLEHSVRRALDRARLLLENQRYREKLEAANRELEASLN LLQEDQNAGRQVQMNMLPTSPWSIDEFNFAHQIIPSLYLSGDFVDYFRVD ERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLFESKRNGTLPEFKPSEV LGHINRGLISCKLGKHVTMVGGVIDEETGLLTYSIGGHLPLPVLYTPDSV RYLEGRGLPVGLFNEATYEDHILELPPVFSLTLMSDGILDLLPEPTLKEK EAALPERVRAAGGGLDGLRQVFGLATLGEMPDDIALLVLSRNLQ >PFL_2163 sensory box histidine kinase MPDSTHLRHWLRLQREGQLPDSPWLGHDPQPSLLLDAQAQPLDLNPALRQ WLDDAATGDLAALLPVNHPALVRACLEQQRAIEQVEAQWGERILLWSFIP DPHRQRVLARCQEATDQVRAERESAKARRLYRLITENTTDLISRHTPDGS FLDASPASWTLLGYWPEQLRGRLARSLFHSQDLAGLMQRTRDALEQDGYH TMTYRIRHRDGHYLWFETACRGIRDTYTGTVVEVVAVSRDITARVQAEEN KRRLAEVVEANPDPVLFIQPGGAVTYLNPAARRTLGLGDGQAMPPLAAIL SAAVLDSLQREGWDRAEHSGRWNIEARLQPPAGGASVPVSLMLLAHRAAS GERFYSLVAHDQSERELREAQQRHHQDELAHTARLVTLGELASGIAHEIN QPLAAVVNYANASQRYLQALGTQPEAARKVAQGLERIAEQATHAAEVIKR LRAFLRKGGRRVQALDIAEVARETVRLCAWEAQASQVTIDLQLADNLPPV YADRVLLEQVLLNLLRNAIEANREVHGQQGSHIVLAAEATAEGGVQISVS DQGPGVCAEQLPQLFTPFYTSKANGLGLGLSMSRSIVEGFGGDLQAQPQA VGLRMCCRLPASAPADPSATSQATSPATTGARQ >PFL_0490 methyl-accepting chemotaxis protein MFNAIDRYVPDPASAIKRSPEVMSMSLRSLNIAPRAFLGFALIGCLMLFL GVFALNQMGKIRSATERMSQDTIPSIKSVDEFTQLSLRQRVQAYRLLLNR EPQAQQQTLDAIDQRNQKIEEARAQYLKLISSPEERLAYEQYGTLLSHHR QLESQLIELSHNNQLEAMQQLLNTDLMDSAEKINAVLNQLVEINSHYATV ADDDAAAQYRRAFNLVVGLLVLASALTLLFAWRLIRSITQPIANALRAAE EIAEGNLTRPITVDGSDEAGRLLQAMVTMQEKLRDTLQSISGSAHQLASA AEELNSVTEEGARGLTQQNNEIEQAATAVNEMTSAVEEVARNAVSTSEAS KSATTSAGDGRDLVRETVSAIERMSSDVQGTASLIGDLANESRDIGKVLD VIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSE IERMIGSIQSGTEHAVDSMRNSTERAESTLSIARGAGQSLDTINSAISEI NERNLVIASAAEEQAQVAREVDRNLVNIRDLSVQSTTGANQTQAASSELS RLAVDLNNLVTRFKL >PFL_1669 chemotaxis protein CheZ MEHNESSLGDFESTLKKHALELVESLEKGRFGEAVQLIHELNQTRDRGLY QEVGKLTRELHSAIVNFQIDPHMPQAEEVSQITDATERLSYVVRLTEAAA NRTMDLVESSTPLVNGLSTEAQALSADWGRFMRREVGAEEFRELARRVDS FLTRSEQETRTVSGHLNDILLAQDYQDLTGQVIKRVTQLVTEVESNLLKL VLMASQVDRFAGIEHDRESILAEKDPQKHLAKGEGPQIHADKREDVMSGQ DDVDDLLSSLGF >PFL_0395 methyl-accepting chemotaxis protein MCICPSFSVVASRHKMQRKALHCGKLTPLVDQPLAVVHLMTRNMKFSHKI LLAAALVVAVAFACFILFNDYRQREALRSSTEASMQELGSLTTSNIQTWL ESRIQLLQSLAQQIAVDGSGANSLKRSVGLPAYTGNFQLSYFGGQDGVMF SVPAGNRAADYDPRARGWYKAATGAQRTIVTEPYIAASSGKLVITVATPV QHQNQMIGVAGADIDLSSVSAIINSLNFGGHGHAFIVSAEGKILIHPDSK LVLKNLSEAYPNAAPNVSPGLKEVQQGGKTQFISFTHVNGVPSADWYVAL VLDQDTAFAMLSEFRTSAIIAMAIAVVIIISLLGMLIRMLMQPLHLMGRA MHDIAEGEGDLTKRLVIHGHDEFGTLGVSFNRFVERIHSSIREVSSATGQ VNEVALRVVAASNSSMFNSDQQASRTSSVAAAINQLGAAAQEIAQNAALA SQHSSDARSLAEDGQQVVDKTIAAMHQLSAKISSSCDNIETLNSSTVNIG QILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQD SAQQVQKMIEELQVGAREAVGTMTESQRESENSVGIANQAGERLGSVTQR IGEIDGMNQSVATATEEQTAVVESINVDITEINTLNQEGVENLQATLRAC ADLEQQAKRLQHLVGSFRI >PFL_6114 response regulator MSKVSVLVVDDASFIRDLVKKCLRNYFPGIKIEDAINGKKAQAMLAREAF DLVLCDWEMPEMSGLELLTWCREQDALKAMPFIMVTSRGDKENVVQAIQA GVSGYVSKPFTNEQLLTKVKQALNKVGKLDTLMNSAPTKMNSAFGNDSLS ALTGGKPAVVGAASAPVNPFAKPAAAAPAPAPAAPARGLLNSPPVKAPAP AAAAGGGRGQGQLRLSSGNQQCVIKALSIKEALLVVKRTDSLPQVLESAV LDLEQGDNAEVARLNGYLHAVVAFEPKPDSEWLQLTFRFVDQDAQKLDYI SRLIARGTAQKHFVPGA >PFL_6130 conserved hypothetical protein MDNRFSQTSAIPEAPQSMDPTHTQALQQLRKLIPIGLRHAQALLARCANN PQQAAELYKAELLQVLVDKSGLPAEHAREQLHAAGYDLNRALHAIEEARF TLTQRILRKHHRDKGQALDLIAQAIETAEQVPRQYWLDFQRLEALAPALR CFMVLHEWLAYEGWEGFDSALHFHLSQAIAQFRLLHLDALADTLEQADQR QQQLRDALAESENSIDLAMRINQDPFFNRCQDHFNQQRPQLDERLYQWVE QHLEQFPA >PFL_0526 O-antigen polymerase family protein/toluene tolerance protein MQPNALHNTANRVFDFICLWILPIGYLLLLCAMFFLPGRSGLHKLYYGLF SIPTLIALCTRPSELKSLLREPVFIAMLLFCTWAIVSLAWSPPVDSVLGE IKTPLHTLMLFAGCMLLVRYRGEVLQPLVFCAAIVALIASIFNLYVFVRY HTPELRMIGAGAFDNPLLSSHVFGFFCVYWLCLSMNCRRYQILWLSVPAL VIMVAALIATGSRTPLVALTLAALWLSFISWNRRSLMLLGGMLAGGIAVV ALFSQMLLERGSSSRFDLWRLALEQIANHPWIGHGYNASLSLDPGIGFLL QEPHNFALGVLYYVGIIGLLPWLFMQAWALFKSWQLRAEPLLILASTWLM FGIGAGLTEGGGILSRPKEHWFLLWIPLALIAALCISQRARRSPSHTVES LTQADADKLMANARVIEADGLGPKVLRLDDGSFLKLFRPRRWYTSGGFNP YSERFVTNSEQLRELGITTPKILGLYRLADGSNAVRYQPLPGQTLRQSLQ LASSGDERSKLIKRFGAFMANLHEQGVYFRSLHLANVLVLENGEFGLIDL ADLRVYPSSLRKSLRQRNVRHMQRYAEDCGWLFLEHLDALQAGYAQGTSM PLATGLLKQLPANDLHQVAR >PFL_0572 methyl-accepting chemotaxis protein MSAVLSLLQSRLLRPVFVTLGIALLVQVLVAVALTRSTVTALEADLASRL GGDSQKLAGELEQAGKEVTSSLESLSSSTRQRLTAGLSSRLKEEQVQLRA ALEKDLKDSANDMAQLLASVAPRAMWDSDVPTLSEFARRAQRNPNVLFVV YDDAAGEHLTRYLNRENPINKALLEKGKGDRALDKVLDAAKNDPSVYYLE ASINPNGVEIGKVLMGVSTASVEADIAALDQRFSALIASSDQLVGDSLKG ASADSSAAMRSRLQSAQGTAAQMQANTASTVQEAAATLRWQIGVGLALVG LALLLLLAVVLGRRVVSKLHLLIAALNDLAAGEGDLTKRVPLNSNDEIGD MASAVNRFVDKLQPIVREAGDVAQRTGVEIGAMSQRNAGADAAAEAQRDE VAESLRALSQMADEAQAESQAMQAALQQVVEIRQATDETTRTSEQVGSLI EALAGQVDTGAKVIERLAQQSEQIEVVLTVIHGIAEQTNLLALNAAIEAA RAGETGRGFAVVADEVRALASKTQSSTGDIQAHIGALQQGAREAVAAIGQ AGRQASEGLLVLRDSARLQQSVQSSVEQVHAAIGLATQAAAHQAQGAQAV RGRVETIHAQAERAAQAVVETTASGKVLDSLAAQLKASLGQFRA >PFL_2572 sensor histidine kinase MSLLNPSKGWRSSSSRLLALYSTLFVAWSCILMGVLYYEVSTYLDSLAKH SLMQRQHLFARFEGDQLVEALTTSMTFDMRAIDAYGLFDEQRRPLSGPIR QIPDDLPLDGKIHELKNCIDSDDPSLPRDSCDAVATHTRDGRWLVLVRDN GSLFAVTRIILHALLWGISLTIIPGAAGWHLLRRRPLRRIRQIQASAEAI VAGDLTRRLPLSDRRDELDMLAAIVNAMLERIERLMHEVKGVCDNIAHDL RTPLTRLRAQLYRLQQQAEEGSPQALQMDQLLAEADTLMARFRGLLRISE LEDQQRRSGFLVLDPLPLLHELYDFYLPLAEEGQLTLVLDVPASLPSLTG DRALLFEALANLLSNSIKFTPPGGEVILRGIDDDGSPRLEVLDSGPGIPA AERAAVFRRFYRVDENNAQGGFGLGLSIVAAIVSLHGFKLEVGSSERGGA RLSLDCRPSLIADN >PFL_4205 sensor histidine kinase, putative MKPGIQRAPFPKQASSSILDRALRSEHPLAPSAMYASLKSFFSWPPSRDH LRWLSLLLCSCSTLASVLVYWLGRPLPLGLLVINVAALACIWMQYGYSRK SIRFQPQELAERLLEVKENERHRLSRELHDDIGQLLTAAKLQTDWLKRRL PDELQEHCAVLGTTLEETLAKVRDVSAILNPRQLASLGLEASLRAHLLKT LENTSVHWSLECHQRLAGIPEEMAVAAFRITQEAVTNILRHAQAKNLLVR LQRLPEGLSLFISDDGQGFAPASDPGAQGQRGMAGMQERISQLGGLLKVT SEADQGTQIEALFPWAPRTLERASTNKVLH >PFL_0131 GGDEF domain protein MSLFKQLLIAICVFLVVAFSGSFMVSLESSRTQYVNQLRSHAQDAATALA LSLTPNIDDPAMVELMVSSIFDSGYYASIRVVDLATEKTLVERSGIPEVG NVPQWFVSLIGLEPAGGDAIVSRGWEQAARVEVLSHPMFAVAKLWQSALG SLGWLLICGAVSAVLGALLLRRQLKPLDYMVQQSHAIARREFLSLPQLPR TPELRRVVQAMNQMVEKLKALFQEQAERSEKLRTESYQDSLTGLANRRYF EMQLHARVSNPEQASSGYLLLLRVKDLAGLNQRLGGQRTDQLLKAVGEQL LRECDKYPETHNLVTRVRGGEFAVLAPGLVREEAIQLAQSLDSALGNLHA TGATDVASVASIGLAAFAHGDSPQAVLSLGDQALAQAEAQGDTSWACLDQ GASAQVGDDHHAWHRLLDRALSEQHFQLYFQPVVAARDTHLVLHYKVLSR LLDEQGQTIPAGRFLPWLERFGWTSRLDLLMLEQVLRQMASHEDCLALNL SAATLADPHALNRVFEILRQHSDLGPRLTLEIGEEQLPEQAMLEQLTRRL RELGFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRDIDQESDKRLFI EAIQRAAHSIDLPLIAERVETEGELQVIREMGLYGVQGQLFGEPAPWG >PFL_5212 methyl-accepting chemotaxis transducer/sensory box protein MFNKRLKQQLATLSDELNALQQFKACLESQVLNLELDGEGAIRRANQNFI QALELDGQPLAGVALESIISRHPQAVPLYREFKAALGRNESYTGQLRLQR GGGREAWLQVCVQPIRDGAGRLDHYNLICTDQSASVESACEHENLMAALL RSSAVIEFDLQGRVLTANSRFLACMGYRLDEVQGQNHRLFCEPQEYEGPG YQEFWARLNAGEYIAQRFKRIDSQGRVVWLDASYNPVLDASGQLYKVVKF AILITDQVNQEQRVAEAADIAYSISRQTDTSAQRGSAVVTETLDVMRDLA TCMQQAGDGIEALNEQSLVIASIVKTISGIAEQTNLLALNAAIEAARAGE QGRGFAVVADEVRQLASRTSNATDEIVGVVRQNQDMARSAVELMAEGRQQ AEQGLTLAAEAGTVIVEIQDGAQKVVSAVGQFANQLSA >PFL_1408 transcriptional regulator, AraC family MIDGAQLHHLPRAIAAHAPRDLNGLLANMAPITPLLDCIPSAVFFIKDLQ ARYRVANLTLAQRCGFKNVRPLLGKTSAEVFPAVLGPVYTEQDQRVLRQG ITIKGQLELHLYGSREPGWCLTHKLPLYGRDGQIIGMAGISLDLQAAHDT HPAYERLAAVDRHIREHYSEAIRLDDLTRIASLSTAQLERYCKRIFHLTP RQMIHKVRLEHASQLLLTEEPITEVALQCGYTDHSAFSRQFKALTGLSPR QFRQNAAR >PFL_3196 DNA-binding response regulator, LuxR family MEKLKVVIADDHPIVLLGVRELMERDERFEIVGETLSSQGLIQKLESCQV DVVITDYNMPGDSPYGDGLKLVEYLKRNFPHVQILILTMISNQLILTRLR ELGVVGVIQKSQLHEEIQIALKAIAQKAVYRSLEPAPNSVLESNVAIDER ISTLSPKEFEILRLFVSGKSVSEIARSQNRSAKTISAQKISAMRKLEVQS DQDLLTYCIGRNIFN >PFL_0366 conserved hypothetical protein MFKRLLVVVASASLVLCGLARADEPADTSLVLLTENFPPYNMAKNGKNFA QGENIDGIAVDIVREMFKRAGINYSLTLRFPWERIYKMALEQPGYGVFVM ARLPDREPLFKWVGPIGPDDWIMLAKAGSKITLESLEQARKYKIGAYKGD AIAETLTKQGLAPQVVLRDQDNARKLVAGQIDLWATGDPAGRYLAKQEGI SGLKTVLRFNSAELYLALNKDVSDEVVAKLQAALDQMRQEGLVEEIMGRY L >PFL_2407 methyl-accepting chemotaxis transducer MRLPPALCAKSRRCRGAWPHRAPHRCKPRLASPVVLFAATRNTVMLLRTM NISRRAGFSFALIALLALALGGFSLLEMQRMNQQSLEVDQNWQPSIVAAN ALALTSTQIRTLTLRMLVVRDSGDVQALLSRLNELEQQQDRQQQAYEKLI NVDDERAAYERFVEAEALYLKDQHRITDLMRQGHKEAAIDIVDGGPFLAN ADAMLKELLTIIDVNTRGGIAAAAQSNQVFKGAVGMVLLIMLVVVALTVV LALFLTRSIVRPLGQAVEVAETIARGDLGQSIAVSGKDEPARLLHALQTM QASLRGTLQRIADSSNQLASAAEELHAVTEHSSQTLHQQSNEVEQAATAV NEMTVAVEEVARNAVSTSEASQETDRTAHHGREQVQHTVDSIGQLAEDVT QTCQRVENLAVDVRNIGQVLEVIRSIAEQTNLLALNAAIEAARAGDAGRG FAVVADEVRALAHRTQQSTQEIESMINTIEEGTEGAVSAMRNSNERAHLT LEAARASGLALDQITQAITTINERNLVIASASEEQAQVAREVDRNLINIR DLSTQTSAGANQSNAASQELSRLAVDLNALVTQFKL >PFL_5041 sigma-54 dependent transcriptional regulator MTAKSLLTALLPLVTDLSRELPEGERYRRLLEALRALLPCDATALLRLDG EWLVPLAVNGLSTDTLGRRFKVSEHPRFAALLSSPGPTRFASDSDLPDPY DGLVEGLDDHLEVHDCMGCPLFVDERPWGLLTLDALDPQRFEPIELDALQ AFASLAAATVSAAQRIERLAQRAENEHQRAEVYRQASGQNREMIGQSKAH KRLLEEIKLVGGSDLTVLITGETGVGKELVAQAIHAASPRAEQPIISLNC AALPDTLVESELFGHVRGAFTGATQDRRGKFELANGGTLFLDEVGELSLT VQAKLLRVLQSGQLQRLGSDQEHRVDVRLIAATNRDLAEEVRNGRYRADF YHRLSVYPLRVPALRERGRDVLLLSGYFLEQNRSRMGLGSLRLSVEAQQA LLAYHWPGNVRELEHLIGRSALKALGNHPERPKILSLDAGDLDLPRASER TSAPVEPASATQAMPAVAGDLRQATDHYQRQLISSCLERHQHNWASAARE LGLDRANLSRLAKRLGLR >PFL_3327 sensor histidine kinase, putative MKLSRRVPIMLLSLLTLSLVLGLAFLYFKTVIGQPSNYVLARDLISHIKQ LNAQWETEVLKARIAITHDYDPLVMPVQEINQLWNRFDQLSQQNHNDPAA WTAGHQAFIEAFQEKAGLVERFKTHNAVLRNSLAFLPTAEDDIQRRLAGL DDQARLSEQTIAIDTYDLLLSSLEFAQVSSDDRAADILVGLNKLAVNKER LPEPMHEPVEILSNHVSVILREQPVVNDLLERITSIPIAQRLDDITHLLN ADQSQADLQDQKAHQYLLLFAALLVILILYLAVRLVRSYAVIRRVNTALQ SANEHLEHRVEERTRELKEAQSELLDSARQAGMAEIATNVLHNVGNVLNS VNICSEMLSRTLRSSKAQGLGKAMQLINQHQDDLGRFFTEDDKGKLLPGY LNQLVEAIATEQQGMGEELAQLARSVDHIKEIVATQQSYAGASRLIEPLR VAELIEDALRMNSGALARHQVTVVKDYGPLPPVMGDKHRMLLILINLISN AKYAMSNLDDHSRTLTLSARVLDGQTLSISVKDEGEGIPAENLTRIFSHG FTTRKDGHGFGLHSCALAAMEMGGQLNVHSDGPGLGATFTLDIPLISAED P >PFL_4040 sigma factor regulatory protein, FecR/PupR family MDSRDCASAQARIRDEAAAWFTRLQEPEVSPEQQLRFQQWLAEDPQHRHE FQLLEALWAATDLVPRARLQALCATPPAKARRRPLLRFALAAGVATLAVG LGLFSGLNQPVSYSAQFVTALGERRHVALPDGSQIDLNSRSHLQVRYARN QRLIELVEGEALFNVEHDTDRPFVVAAGAGKVTVTGTRFDVRRDERQTRV AVEQGRVKVQGRDAATDDFIALTPGQGTHVDEHGKVAQAYAVNPEALTAW RSGKLVFNNASLAEVVAEVSRYREQPLRVASAAVGELRLTSVFKSDDTQA LLKALPSILPVEVRTLADGSQEIFSR >PFL_5702 CBS domain protein MQFLQRFPPFNQMEQLHLAYLVEQCQLRFYGPGDSIIKPADGPVEHFYIV KQGRVVGERTHAAKGSTETTFEITSGECFPLAALLGERATRTEHRAAEDT FCLQLNKGAFIKLFALSAEFRDFALRGVSSLLDQVNQQVKQKAVETLGTQ YSLNTRLGELAMRHPVACSPQTPLREAVALMHEQQVGSIVVVDERKAPLG IFTLRDLRQVVADGTQDLNQPIEQHMTQAPFFLSPDHSAFDAAIAMTERH IAHVCLVKEQRLCGVVSERDLFSLQRVDLVHLARTIRNAPRVEHLVALRG EIGQLVERMLAHGASSTQITHIITLLNDHTVCRVIELTLADKGDPGVPFS WLCFGSEGRREQTLHTDQDNGILFEARDTAHAAEIRGKLLPIAQQINQSL AMCGFTLCKGNIMAGNPELCLSRAEWARRFAAFIREATPENLLGSSIYFD LRVVWGDEQSAEQLRRGILDQVADNRLFQRMMAENALRQRPPVGRFREFV LARKNGEKATLDLKVQGLTPFVDGARLLALANGIGAINTLERLRQLVSKQ VIEPLDGAAYEEAYHFIQQTRMQQHQRQTRENQPYSNRVDPDSLNHLDRR ILRESLRQAQRLQSSLALRYQL >PFL_4238 DNA-binding response regulator, LuxR family MGSVLIIDDHPVVRMAIRILLEHEGYSIVGETDNGVDALQMVRDCEPDLV ILDICIPKLDGLELLERLGNMPRRSRILVLTAQSAALFANRCMRAGACGY VCKQEDMSELLSAIKAICSGYNYFPSLALQVNRNTLGSPLELAQFNSLND RELMVLQLFAMGQTNKEIAAGMFLSNKTVSTYKKRIMQKLATTSMSELVD MAKRNALI >PFL_1048 general amino acid ABC transporter, periplasmic binding protein MKMLKSTLAAVTAATVLGMSGFAQAGATLDAVQKKGFVQCGVSDGLPGFS VPDATGKILGIDADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEID VLSRNTTWTSSRDAGMGLVFAGVTYYDGIGFLVNKKLGVKSAKELDGATI CIQAGTTTELNVSDYFRGNGLKYTPITFDTSDESAKSLESGRCDVLTSDK SQLYAQRSKLATPTDYVVLPETISKEPLGPVVRKGDEEWFSIVKWTLFAM LNAEEAGVTSKNVEAEAKSTKNPDVARLLGADGEYGKDLKLPKDWVVQIV KQVGNYGEVFEKNLGKSTPLAIDRGLNALWNNGGIQYAPPVR >PFL_0674 methyl-accepting chemotaxis transducer for inorganic phosphate CtpL MRLKLLTNLNTLLLVAVCLALGATLWWSQRALERPYLLMERYLGLSQQFQ NQVARNIEDYLASGDALRLSSAAQALETLQGELGELPPPLAQSLRPSLAS LDDFSKTDLLAAGKLAGDPQALLLQAERELGANLEQLSQYASGARSAEAA NYLPLLLTASQHLGKLSLARDKLVSSGRSELAADVEREVNSIRAQADQLE ALPLLGVAASSESGTDDFAAMMGLENTEKAAAEDAGIGFKRELNSLLSRY PAELQRTREQIQKRADLSAATLLKINAVRQAIAELEPAVRAQHGQIQGEV RLMQGLMIGLILLIALVIDTLQRKLARVLTNLAPALSTWAEGDFSRPIQL GKTNRELHDIEESLNRLRAYLVDLVGTIRQNAEQVAGSSRALADLSSGLH SGAERQAGDTAQIRDALGELEATIQQVAGDASQAADASRSAGLAVQQGQK VIGLSLTGLHALVGEVQGNAQMIEHLAQESATIGGVLTVIRSIADQTNLL ALNAAIEAARAGEMGRGFAVVAEEVRSLAQRTAGATAEIQTLIAGLQAAA QQSVQGMRAQVEHAEATAGQAQAADGALDEIVGAIQTIADTAVRIADVTA QQSGAVSEIRDHSERIHQLGGDNLLRIGEGRAQGENLLDLGGQLHTAVQA FRV >PFL_4919 sensor histidine kinase/response regulator MKVEKDSELDQATLRIIVAGCALVWFGVIGFLPGQDVDPYVPVMIYISLF MLGSIVLRMAIARWPGHYPARRILGMVYDYTGTCYGLVVGGEGALPIYAV MVWVNLGNGMRFGSRYLAIATVLALFALFMVYLLTPYWQAQPYMVLMLMI TSTVIPVYAHILLKRTRLASEEAIAANLEKSRFLAQASHDLRQPIHSIGL FTACLREASLGGDERRLVDNIDRSLLNVSQLFRSILDLYTLDNGRVQPKY ETVHLGELLRDLVRQNSEAARWAGVELRLRPCAHWVRVDPGLLATMVQNV LSNCFKYAAERPVLIGVRRRGQGLAIVIYDQGRGIAEEHLPKIFDEFYRV RQVRDKDVEGVGLGLSIVKRLGQMTDLQVAIRSRVDHGTTVSLHGLSLAA PQRLHGRDEALQSGLLTGLRVCLVEDDRNVLLATSALLERWGCVVQAESS GENLLTDCDIIVADYDLGTRASGIECIDSIRQQRGWEVPALIITGHDIEK IHAALHDRNIAILSKPVRPVELRSTLRALREAPLVPAHRAAAPETVTRSG TG >PFL_2516 sensory box histidine kinase/response regulator MPRFILPMLMWLTCLPAMADPARALQLLNYESPHHQPLPLSGDDWQWLRN KRELVLGTSQQNLPPLEMVNEAKEYEGITADYAGLLGDALGVKISVRAYD TREQVFSALAKGEIDFMGSVTQGEAERRQLLRSQIYLANRPTLVARLGDS PSLKNGLQGYRLAISLDSISLPVAQAMYPTARIESYASADAAMAAVAFGD ADMLLGDAVLAQFLISRNYSDYLRIIYSGPASTSGFSFAVAPDNQRLQHL LDNALQAVHKEQGTSIRNRWGDRLLLSMEKTSLTVEEQRWIENNPVVRIG IHRYLPPMSYFDANGNYLGITADLLTMLEAKTGLSFDITALPSFKDLNEA VRNGQVQMVADRARTPERETYLQFTRPYLVGPYMLVTSDAANAPKSLEDM AGKTLLIGSGHALVSQLHQRYPQIRIKEVQTNFEALSLLRDHKADGTVQA EIAVSFNLPRIKEDQLKVRPALDLPLLNESFAVRRDQLELFSIIDKSLRS ISPDAITELNNRWRSKAAVAPPSWRDYRTTLYLAGAGSILLLLISLAWGY AMRRQVRQREKAEHALNDQLRFMDALINGTPNPIYVRDLKRRLVICNDSY LKSMGTDRQSMLGTDLEQLAVPEAEQFSKDFQSIFDGGPPLLIDRTVHIR GQEMRIYHWMLPYRNAEGEIQGIIGGWLDISERQQLLQELTQAKDEADKA NRAKTTFLATMSHEIRTPMSAVLGMLELALKRADQGQFDRPSIEVAYSSA QTLLELIGDILDIARIESGHLSLSPERANLRGLVEPVFRVFDGLARQKGL RLELELDSHAGDDVLVDPLRFKQILSNLISNAIKFTQQGGVQVRLATGPS EPEYLALLLTVKDSGIAADDLQQLFKPFSQVLGQHQDARSGTGLGLVICR TLCEMMGGTLTLHSQPGLGTEVRVQLRLSRLPALPQAPTVLPPAAPAVAA RQALHILVVDDSQANRQSLCEQLKYLGYSLSQGSNGAEAFKIWREEPFDL VITDCNMPVMSGYQLARHIRASEREQQSAPVHILGFTANVQPEEEQRCRD AGMNGCLFKPIALPDLDLRLRSLAALPRVQSQAPRERYDIQQLDYLTNGN PKVIQRVLRGLHQSNQKDLMDIREQLASETHQGVADLAHRIRGAAQIIKA QVLIQECEYLERACLQGAASTEIKAALARLEQAMLELDRDLLDALQPE >PFL_2637 transcriptional regulatory protein RstA, putative MENLGLGKVLLVEDDEKLAGLIAHFLSQHGFEVLTVHRGDTALAAFLEFK PKLVVLDLMLPGQSGLHVCREIRAVADTPIVILTAKEDDLDHILGLESGA DDYVIKPIKPAVLLARLRALQRRQVPETTTLRGALAFGVLSIDRNSREVR LAGEPVELTTMEFELLWLLASAPGKTLSRDDILNRMRGIEFDGLNRSVDV YISKLRGKLKDNPREPVCIKTVWGKGYLFNPFAWEV >PFL_2537 methyl-accepting chemotaxis protein MVTRNMKLTSRALLSFGAICVLLIGLGGLALWKMGQIHDAALDLQTNWLP SVRQATKIESGTLRVRLEALHYATENDAQKAASLDKLGTLKASLAQAIKD YEPLVSSAEEKTTFDQVKRGAQDYLDKLAVLIENSKTNTAQQTSDYINQV TVPLANTLQSAIEALIAINENGAEHSANQAGQQFDTGLTLTSVIIVLAIV LTILIATLFTRSIIRPVLSLLATTQKIAEGDLRAQVDVSGQDELTDLQKS TQAMLDSLKSTIRHIADSSTQLASAAEEMSAITRESNAGIQQQSMETDQA ATAVNEMTAAVEEVARNAVSASQSTQASERSAGLGKERVEQTIHSIEKLT GTVEHTRLEMAGLAQQAQDITKVLDVIRAIAEQTNLLALNAAIEAARAGE QGRGFAVVADEVRALAHRTQLSTQEIEQMIQGIQSGSSKAMLSMQQSSED ASQTLAIAHEAGAAIGHITQAISEINERNLMIATASEEQAQVARSVDQNL MSIRDLSLQSSSAASQTSIASSELSSLAVSLNKLVARFSL >PFL_3285 Ser/Thr protein phosphatase family protein MLDPARSYDLIGDVHGCALTLEHLLDRLGYHKQAGVWRHPSRMAVFLGDI IDRGPRIRESLHIVHDMVEAGQALCIMGNHEFNALGWSTPAAEGSGKQFV REHTPRHARLIHETLTQFEQHPGDWHDFLQWFYELPLFVDAGRFRVVHAC WDAGLIAPLRQQYPNGCIDREFLQSAAVPDSFACTAFDRLLRGTDMRLPH GLTMTSGDGLTRAFFRTKFWEDDPQTYGDIVFQPDALPEPVARTPLSPAE KNSLLRYGAEEPMLFVGHYWRSGKPAPIRPNLACLDYSAVLYGKLAAYRL DQETRLDPNKFVWVDVERPEVVR >PFL_3245 conserved hypothetical protein MPGNPQPNLWHPCPPCACCAQQRLHGDKRLNRASGRRSSDLSAISRCSTP SPITWTYLRGHCLSTSSALLSEKAATGIEGLDDILSGGLSRSHVFLLEGE PGTGKTTVALHFLRAGAAAGERCLYITLSETERELRQGAQSHGWQLDENI HIFELIPPESLLNAEHQQSLLYSSDLELGEATRQIFEVVERVKPTRVVLD SLSEIRLLAQSSLRYRRQILAIKHYFVRYDATVLLLDDLTTESLDKTVHS VAHGVIRLEELTPSYGAERRRIRVVKYRGQKYRGGFHDFTIMGDGVQVFP RLVAAEHRGQYQRLTLTSGITEMDALLGGGIETGSSTLILGPAGTGKSLI SMIFAAAAVARGEKAALFIFDEELGLLFERMRNMGIDLKALQASGNLIIE QVDAAELSPGELSHRVRRCVDQERIKTVVIDSINGYQAAMPEENALVLHM HELLLYLNRQGAATFMTVAQHGLVGDMQAPVDITYLADTVVLLRYFEALG KVRRAISIIKKRTGSHESTIREYRISARGLTIGEPLEAFQGVLRGVPTYL GESKPLLRDEGQ >PFL_4076 conserved hypothetical protein MSNRALRILIADDQHFRRMQIERALNQLNYYRVAPVHRLEELLTLVEYSC ESFDLLIINANLAVRSDFDLLAFCLDHPHIEQALIYGSQHLAATSGSRRC KVHVSPAEWPDSAAIKRLMLWVDPPLPDAAGLSRQRLAQLHGHWGSPN >PFL_0277 osmolarity sensor protein EnvZ, putative MKTPLWFPQSFFSRTLWLVLIVVLFSKALTLVYLLMNEDVLVDRQYSHGV ALTLRAYWAADESNRDQIAEAAGLIKVVGSGVPAGEQHWPYSEIYQRQMQ AELGADTEVRLRMHAPPALWVRAPSLGDGWLKVPLYPHPLRGQKIWSVLG WFLAIGLLSTASAWIFVSQLNQPLKRLVYAARQLGQGRSVRLPISDTPSE MTEVYRAFNQMAEDVEQAGRERELMLAGVSHDLRTPLTRLRLSLELMGDH TDLTDDMVRDIEDMDAILDQFLAFIRDGRDESVEEVDLGDLVQEVAAPYN QNEERVHLRLEPIQPFPLRRVSMKRLLNNLIGNALNHAGTEVEVAAYVSG DTNAPYVVLSVMDRGAGIDPSELEAIFNPFTRGDRARGGKGTGLGLAIVK RIAAMHGGNVELRNRPDGGLEARVRLPLGLLLPRDAD >PFL_3325 response regulator/GGDEF domain/EAL domain protein MDAGSDAQTKAQEASDQPPGRANRRILIVDDSPAIHEDFRKILAPRQAPD LSLAEQQLFGHATMPAQQAPFCLDSAFQGQEALARVEASLALGLPYAMAF IDMRMPPGWDGLETIERLWNADPDLQIALCTAYSDYSWEAMAQRLAFGDQ LLILKKPFDSLEIRQMASALTWKWQMAQDARQKLDDLQQTIERRVAELLK VSHLLHYDVLTGLPSSTLLGDRLGQAMARARRYEQRLAVMFLGLDRFKRI NHALGYPAGDELLKRIARRLEQGMRESDSLFRYGSDEFVVVLHDQQHPAQ IRALAQKLLATVSQFDDIAGHDLQVTASLGISLYPEDGQDALALIKKAEM AMRTSKEQAPGSYCFFTDDMTHRAREQQYLESGILQALERREFHLHYQPK IHLASGNVVGAEALIRWQRPQQGWISPELFIPVAEDSGLITRISQWVLGE ATRQCRAWQNAGLPPVPLSINLSAADFRQPQLLQQLRDALSDNALDPAWL ELEITEGVLLQNVEVTLATLLAIKALGVRLAVDDFGTGYSSLSYLRKFPV DVLKIDQSFIHGLSHEHKDAVLVSAIINLGRSLNLKVIAEGVETHQQLTF LQQQGCEEAQGYYFSKALPAEDFARLLGKHRPQFQVTDHDH >PFL_6079 Ser/Thr protein phosphatase, putative MRSAPQLSYQSASYSHVGMVRKINEDAWLEAPETGLWLVADGMGGHAAGD YVSSLIVDSLRAVPAADSLDDYVAALRNGLAAVNAAVREETANRGVTMMG STVVLLAVRGARAVCLWAGDSRLYRLRDEQLEGISRDHSYVQDLQDSGLL SEAEARVHPRANIVTRAIGVEAQLELSQIDLQVQDGDTFLLCSDGLNKTA EDFELRDVLSHSEPNDVVRSLIHLGLTRGAPDNITAIVIKAAGH >PFL_2707 DNA-binding response regulator MTPRVLIVDDDPLIRELLQAYLSQEGYDVHCAATAEQAESFLGQHTVDLL MLDIRLPGKDGLTLTRELRVRSEVGIILITGRNDDIDRIVGLECGADDYV IKPLNPRELVSRAKNLIRRVRQASPPQAPANSPSPVKQFADWALDTDRRR LIDPRGAETLLTHGEYQLLSVFLRNSGHTLSRDQLMDQIRNREWVPSDRS IDVLVGRLRRKLHDDPAEPELIITIHGAGYLFTASVAA >PFL_4322 sensory box/GGDEF domain/EAL domain protein MKQKRTFATPRLLGIVWPFIAVVLFQALLGGLSLYVLSAVRGYVAGESLW SKGQKDAIYYLNLYADSRDEGTFLKYQNAIAVPQGGHELRVALDHQPPDL EAARLGILKGGNHPDDVSSLIWLYLNFRHFSYLEKAIDLWTVGDGYLLQL DTVAREMHQRIGSNSASEGDVQRWKSQIFAINDGVTPAAKAFSDALGEGS RVILRLLLVTNLATALVLIALALLRTHKLLAQRHAFADALQLEKERAQIT LQSIGDGVITTDVEGAIAYMNPAAEDLTRWKAEQAVGLPLAALFNLLDEN AQADGFTLIEHILSGQLSGGSEHSKLIQRLDGSTVSVTLVGAPIRNAGKV SGTVLVLHDMTQERQYIANLSWQATHDALTGLANRREFEFRLEQALHSLI RQPARHALMFLDLDQFKLVNDTCGHAAGDELLRHICALLQSGLREGDTLA RLGGDEFGILLENCSPEAAEKIAEGLRQTVQNLHFVWKGRPFVTTVSIGL VHIAQTPTTLEASLRAADMACYMAKEKGRNRVQVYHADDSELSLRFGEMA WVQRLHMALEENRFCLYSQEITALGHVERGGGHVEILLRLHDEAGRMILP DSFIPAAERYGLMTSLDRWVVQNVFKIIAQCIAEGREGPMAMCAINLSGI TIGDDAFLDFLREQFVVYGVPPKLICFEITETSAIANLGSAIRFINELKG LGCHFSLDDFCAGMSSFAYLKHLPVDFLKIDGSFVKDMLDDPINRAMVEV INHIGHVMGKRTIAEFVETPQIEQALLEIGVDYAQGYIIERPQLFTCDSL QCRPVRPQPLLFKAPGTFR >PFL_1753 DNA-binding response regulator, OmpR family MQNTSAPLNEDAKALVSGDDKRWNTRALIVDDDVPIRELLIDYLARFNIH ASGVTDGAAMRQALQAEHFDVVVLDLMLPGEDGLSLCRWLRTESDIPILM LTARCEPTDRIIGLELGADDYMAKPFEPRELVARIQTILRRVRDDRSEQR ANIRFDNWRLNSVLRQLISADGLVVPLSNAEFRLLWVFIERPRRVLSREQ LLDAARGRSIEAFDRSIDLLVSRLRQKLGDDPKSPQLIKTVRGEGYLFDA RDIG >PFL_1643 anti-sigma factor antagonist, putative MSVVTEISPDGQKLTISIRGRFDFGRHQEFRESYERLNRTPESIVVDLKE ATYLDSSALGMLLLLRDHAGGDNADVRVINSNSDVRKILAISNFDKLFDI S >PFL_4802 sensor histidine kinase MAQISRPLRLTFYILVILAGTVLSAGLAMRHAERQTLVEEAARANEQLGL YANSLHTLIERYRALPAVLALDPELRAALQGPVATETQDALNRKLEKING AARSSTLELLNHEGLAVAASNWRLPSSYVGHNYGFRPYFKQTRSQGSGRF YAVGVTSGIPGYFLASAVKADNQDFLGAMVVKLEFPELEHEWSQGNDTLL VSDARGIVFIANQPGWRYRHLQPLSSNDLEEIKLTRQYDKQPLTPLQHQT LQRFDDNSSLARVEGPEGRASYLWESLPLAAEGWTLHLLRKPPNAFEETR NAGLAAAGAWLTLVFLLLFLNQRWRLGKVRQRNRQELEQLVEERTRDLRT AQEGLVQSAKLAALGQMSAALAHEINQPLTTQRMQLATLRLLLDHGRVDE AYKALRPLDDMLTRMAALTSHLKTFARKSPSGLRERLDLTAVVDQSLHLL EARLRAEDVEVVLQLTRPAWVRGDAIRLEQVLINLLRNALDAMQDKPHKR LEISLEAEDQLWQLRVADNGGGIAEEHLLSVFDPFFTTKPVGDGLGLGLA VSYAIVHELGGRLSVANQEQGAVFTLSLPIDLEAHIQC >PFL_3716 GGDEF domain protein MVHPPPRRSGLARESHPPPGAGLAGLFAGKPAPAGRKKRVRRELIRPHAG FPRRHPPVTNICCAGALSLLAKRIAAMFSVLKPHRWKLAALLLAANAGLL LHLACGSLKSVSEWQWLDIIGEGGSALLALVWLGLVLKSRPAGRVTNYLA LGLSCIFFSWWIDSLDEFIRLPDSITWDHWLESGPMPIGMILLTIGIYHW HREQLAISAQMEKKERLFREHRQFDKLTPLAGADYLKRELASSLQDSRRQ QQPLSLLALDLDHFAAINQDYGHAEGDAVLQALSHVLLLNLRRQDLLCRL AGDRFVVLLPNTGESQARLLALELQQAVQGLAHKTRQHGERLHLAASTAV VMALEETPEGLLKRLNLALARAKQPLAKTA >PFL_3548 amino acid ABC transporter, periplasmic amino acid-binding protein MIRSFKRIVRWAFLCSSLAGGSVLLGAPQALADCKPAHSFETLTPGVLSV AAWVFPPYSIPGPGNQLSGVDGEIIKRIAARECLDIKLTVVDPAAVVQSV IARRADVGIGDWYRTAERSKVLGLTAPLYLDVMGIISSEGYSKISELKGQ RIGTVQGYLWVDDLKKAFGDNLVLYPNPVAMAQDLAAKRIALGIDSFAVG VASQQKGAYRGMSIKVSEPDPRVKATLEPGQTSFPHTKANTALSVALNEN IQALHASGEIAEILGSFGLDKQAANVGAPRLVE >PFL_0052 conserved hypothetical protein MIPRMSSIRFIPALCLSLLALLAGPQVQAAEAPSRRPDQWAQPVEKQYNL YQMSPTLYRSALPDKGAVPLLQQLKVATVINFLPESDASWLSAPGINQVQ LPYRTNHVDDADVLKALRAIQSAEAQGPVLMHCKHGSDRTGLMSAMYRVV IQGWSKEEALNEMTQGGYGDSSHFKDGIRYMMQADVDKLRTALANGDCST SVFATCSVKSWFETVSATKPLSN >PFL_0515 lipopolysaccharide core biosynthesis protein, putative MASWNLDPAYQALAEDFGSLEAVFALQGEHLTRDPLSEVIRVERGGVNYY VKRYTGAGKNLRRYLGKPRVKFEWQNLKRFAKWGIPTADVVAWGLERRCL AYSRGAMITRELPRTEDLSVLAERNDPRLQDRRWVDGVSRQLAAYTRVMH DHRFTHNDLKWRNLLVDDQDRLYLIDCPNGDFWRGFWLKYRITKDLACLD KVAKYHLSATQRLRFYLQYRQRDHLSAADKERIRHVVRFFEGRE >PFL_3822 sensor histidine kinase MPSPPLDPASALALRSQYRQSQSRAARLRLLVDTGQELLQLPPGQMRQRV VQRACAFVAMDQGLLLEWSRDGVAHASAEQGHGECLQALRAVAGQAQWLE RPLAQTGVLRVLLHRADGQPFGALLLANSVPISAPDSEDLESLQLLATLL ATHLENQRLLQDLQARERSMSELVQRLFSAQEDERKRVAYDLHDGLAQTL AGLHQRLQGFAGRCPPLPEPLHDELQTILQLAQGCVGEGRQLIGGLRPHV LDDFGLLRAIDREADRLRDAGLAVHWQQRYPERLPAALEIALFRIAQEAI NNILKHARANSVSLNLALEAGQAVLGISDDGAGFQPASGQGIEQLGQVAM QERAHLLGGRFTCHSRPGSGTRILARVPVPSLEHAV >PFL_3484 sigma factor regulatory protein, putative MEQQVLDQALEWLVLLQSGISPPEQQAACLAWRRADPQHELAWQRLAGIG QDLRDSTRSLPAPHARQLLQARSHPGRRTLLKGIVGLGVVAASSWSVRER LLLPQLFSDYHTATGERRQLQLAAGASLQLDTRTSLDQKASPQGLQLRLN SGRLLLTLGNAAPVQVTTTDGHIQLAPRSQLILSVGLPGINGTRVQLLAG SGSVSTAHAPALSLDPGQQVDIAQQRISALAAVPTTANAWTQGLLIAERR PLGEVIAELDRYRPGLLRCSAEIAGLRVSGSFSLDQPDASLELLARTLPI RIRRVMGYWASVDAA >PFL_1041 basic amino acid ABC transporter, periplasmic basic amino acid-binding protein MKKLPLISGLALSLLACSSLFAAEKTLRLGIEAAYPPFAFKTAEGKIGGF DYDIGNALCAQMQVKCEWIEGEFDGLIPSLKVKKIDAALSSMTITAERRK SVDFTHKYYFTSSRLVMKKGAEVDDQYASLKGKTVGVQRSTTTDRYATEV FEPKGIKVVRYSNNEEIYMDLAAGRLDAIFADSIPLADFLSMPRGAAYAF VGPELKDPKYVGEGAGIAVRKGNSELVGELNKAIEDIRANGEYQKIQAKY FKSDIYGD >PFL_0301 sensor histidine kinase MTPPLPRRPRWRSLALLALCLAPLLWPLEHLAERYYRNELTSQNRQTLDL YVANLLGTLHRYEVLPQILGDLPALRAVLGAPDDGVTQGNANRLLKNISA QTGAEVMYLMDTSGKTLAASNWDKHDSFVGRNFAFRPYFSEAMAGRLGRF FGLGTTSAKRGYFFAAAVRDGERILGVLVVKVDLDHTESLWGKTPEQLLM TDHNGVVILTSRPEWRFRATRPLSDEERQAIVAIQPYPTRDPRPLNLNPN AWLTQTQQIDETRWAVSILAPRTLIDRPVRTVVAVGAAALLVLMLLLGLM MQRRRHYLERIAFEAKARRELEMRVAERTSDLESLNRRLKQEVLERETAQ QELVRAQDNLVQAGKLSALGTMSASISHELNQPLAAIRSYAENAEVLLDH QRTDDARGNLKLISELTGRMASIIAHLRAFARRDHHAPESVALQPALDDA LALLAKRRRAMEVELIRDLPAATLWVEAGETRLRQVLGNLLANALDALTE KGPPRKLWLSAESTATGVNLYIRDNGPGFCMEALGRAGEPFYTTKTRTQG LGLGLAICDTLMRAFGGELSFANHREGGALITLRLRAGAPGVSLQPSEDR GV >PFL_4647 histidine kinase domain protein MAFIRSAIRYTTTLSMIALLGLAAGCSKPADAPKPGTAASAQATGATAFR LGDLAEFQAIARDVAGLVDKQDMLQVSDSGPGIAVAERERVFDPFHRGLG SDEVGSGLGLAIVKAIADRHAGRVWLDYSDQRAKRGLCVTVAFARVQVPP AG >PFL_4206 DNA-binding response regulator, LuxR family MTCNLLLVDDHSLIRAGVRALVMDIPGYAVIGEADDGSFLLEMVERLHPD IILLDLSMKHTGGLDALRRLKALHPQSKVLILSMHTDPALIMQALECGAH GYLLKDTTATELEHALQALRNNERYLSPAIAHTVINQALTRAQKQPPPPE QNHNLTARQLEILRLIVRGKSTREIALGLGLSIKTVETHRSQIMKRLQIF DVAGLVLFAVRERIISLDD >PFL_2312 methyl-accepting chemotaxis transducer MALLPVRLSHRLTLGSVLLLLFTALAVFAVMTLRGQPKVVEASSALIEQT GSAIVRQLALQLAGIEGVTASMAHLLEGLPKEQALVMATLPKVIDHEGDK AIAGGGIWPEPNAFTPGVERRSFFWARSDAGPLAFSDDYNAAGSAGYHHE AWYTGARNSAPGRCLWSEAYQDPVTQVPMTTCSVPYRQDGAFAGVATIDL RLDDLARFLKEQGAVTGGYAFALDQAGNVLYFPDAQAGGGGQMLSFDALS KQQPWLLPVAEALAKPAPTGQVRSLDLDEDGRLQEAARVSLFSMPGSGWT IGLVTPEQKVTGLARAMTTEILLFLLPLLALLLFFAWLAGHKLIAQLEET TRQIDALGSGQASDNAELHVARADEIGALRAAVNRYAGQLRQMLQKIASE ARQLQNEAARLGQLSSTLAQRAEQQRQENTQLATAITEMSSSALEVAQNT NNCADTARQSLVVVQEGQHKVDANSQSIQQLSAEMAEAAAVIQRLEQDSQ QVGAVLDVIKAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGR TQTSANEISGMINDLQQASRQAVQAIQAGETRTRQAVGEASGASDALSST VTSFDDISQRAQQIAVAAQQQSHVTQEINELAVRIHGISEDNARDAQALD KVSEAMQALSGRLSNLSQGHR >PFL_4533 methyl-accepting chemotaxis transducer/sensory box protein MLFNRHNKTTDSLQQTIAEQSRLLEAIDRSMAVIEFDLQGNVLRANANFL QTLGYREDQVTGQPHRLFCTPEYVRSSDYQQLWNRLRSGQFESGTFERVA SNGQSLWLEASYNPIRDASGAVYKVVKYALDVTARVQEEVEARNKLDAID RAMAVIEFNLDGSIIGANSNFLSRMGYSLAEIKGKHHRMFCKPELINSSA YQDFWNRLNRGEFFNGQFERIDRHGRTLWLEANYNPVYDASGRLCKVVKY AADVTQQVEKHEQDAQSASQAYHISVQTRKVAEQGTGVIQQAASEMRQIA ENIEGSSSLIARLGERSEQITAIVNTIRAIADQTNLLALNAAIEAARAGD QGRGFAVVADEVRQLAARTSGSTAEISSMIDMIQNETQQAIKSMDGTRER AAKGVQLADQAGTVILQIRDGASEAVEAVSMFANERGAP >PFL_3147 DNA-binding heavy metal response regulator MRILVIEDEPKTADYLHQGLSESGYVVDRANNGVDGLHLIQQQPYELVIL DINLPGKDGWQVLEQLQGNYPARVMMLTARGRLEDKVKGLDMGADDYLVK PFQFPELLARVRTLMRRSEVIVQPEVLQVADLQLDPRRHRAYRGSRRIDL TTKEFTLLHVLMRHSGEVLTRTQIISLVWDMNFDCDTNVVEVSISRLRGK IDDASDVKLIHTLRGVGYVLEARP >PFL_3635 sensor histidine kinase/response regulator MYSLLSCILIIAGFVVHWSLNETLSNYRRQMNAAAFNAQQFFNQRESLLK AISSSAVRTSDERLSSTARNFLASNEQLRVLPFGSTPSRRWALVLTARDL VEVDSTHSQLLYLVPEQGLVSTLYEPAATGTGQPPSKAVDAPWLRQLDQR AVQDLLARHPEARTLWYWAGIDGNKQVYLLRPVDEHHASEGWLGLELTEI DLALDPLGLHQGKYLLYDADGALVLHSANWQVPGSLSRLQADEDSFGLHR LGGLPDYIVLNKSVGNAGWRLVYYAPVSQLLRDSRGPLYTTLLVTLLLFA VIFLGARYIRLRLVEPAVRHYSALADSVSLNRRFIEVAPVGLCLMRRDNG RLILCNESGRRWLASVPGLRERILDEPPARVHAIEHALDDGTFIQLTCAP TGYNGVAAVLCCISDVTDFKVAEQSLLQAKLLSDQANHEKTLFLSTLSHE IRTPMYGILGSLEMLRTTALSAQQGDYLEATQQASSALMRTINDTLDMSL IESGRLSLTSAPFSPVRLVEEVAFSYSARARSKGLRLYVTLDPNVAERVV GDGERIRQILNNLVSNAIKFTESGHVVLRLHAEAGPSQAPRLRFQVVDSG PGIAPEFQANLFEPYYRVPSWLGQKAPGTGLGLAICQRLATMMQGQLSAI SEPGLGSSFSFSLAMEPCTAAPAPDLPRLGVTPVYVRGDIQEVNLNLCHW LRRWGALAIPYVAERDPPTRKAVLVEAFLGPSRPVAWSGPRVLMHAPGMG PPQRQAGDSWVARTFSLDSLRNAVAQAQSGIVAERCFASPEALAPSLDLK LLAVDDSPLSLQVIFQQGRYLGNRMVACASAVDALKRTDLLSFDGVLTDL QMEHMDGLSFARTLRERGYCGPIIGITGELSPALRSHCESAGIRHLLIKP VPLDALSEVLQSIKRKVI >PFL_1133 sensor histidine kinase/response regulator MTPDQMRDASLLELFSLEAEAQTQVLSTGLLALERNPTQADQLEACMRAA HSLKGAARIVGVDAGVSVAHVMEDCLVSAQEGRLYLQPEHIDALLQGTDL LMRIATPGGAELVAADIPLYVALMERLLTPGAAMPAAQMPEPPVPELPIA QPQAPVQAHGAFLGEPEAEAEPVLLAASEPAHEPARPGKRMTEGGERVLR VTAERLNSLLDLSSKSLVETQRLKPYLATLQRLRRIQSNSLTALENLNLH LKEHALSLEAQEALADARRLLAESQQLLAEKTAELDEFGWQASQRAQVLY DTALACRMRPFADVLTGQVRMVRDLGRSLGKQVRLEIEGEKTQVDRDVLE KLEAPLTHLLRNAVDHGIELPEQRLLAGKPAEGVIRLRASHQAGLLVLEL SDDGNGVDLERLRQSIVERQLSPAQTAAQLSEEELLTFLFLPGFSLRDKV TEVSGRGVGLDAVQHMVRQLRGAVVLEQDTGQGSRFHLEVPLTLSVVRSL VVEVGDEAYAFPLAHIERMCDLEPEAIVQVEGRQHFWHEGRHVGLVAASQ LLQRPATQESAPTLKVVVIRERDAVYGIAVERFIGERTLVVLPLDDRLGK IQDISAGALLDDGRVALIVDVEDMLRSVDKLLNTGRLERIARNHQQHAQA ARKRILVVDDSLTVRELQRKLLINRGYDVAVAVDGMDGWNALRSESFDLL ITDIDMPRMDGIELVTLLRRDNRLQSLPVMVVSYKDREEDRRRGLDAGAD YYLAKASFHDDALLDAVVELIGGARA >PFL_3819 EAL domain protein MVGQGPLGECGGGLVVPRSRVRRWLAYGSVMQSIKDFYRELAEGHLMLAF QPVVWLPDSSRVLYHEGLLRHVDAQGGDVYPLALLEKHQVMRELDRSVVL CVIDSLQRDERLRLGCNISAQSAIIDSFWYPIVQQLRDFPGVAARLVIEI TESATPPSIEAASEFVLCLRELGCRVAIDDFGAGLGTLEFIRQTRPDIVK IDKGYIQRARSELNSAQTLSHLVQLCKTLAPCVIIEGVETATDQGLATAC GGEWGQGYLFGRPQVDRLGRRCRLAQRVPQLCTPDQA >PFL_2212 DNA-binding response regulator, LuxR family MNILLVDDHAVVRQGYASLLRAVLPAMQVREAASGEEALARVAEEVPQLV IMDFGLPGISGLETTRRLRQRLPQLRVLFFSMHDELPLVRQALEAGASGY LTKNSAPQVLIEAVHRVLAGHAYIEQPLATQLACTPAQNASDPRLQSMTQ RELEIFVMLAKGTPARVIAEQLCISAKTVSNHLTLLKSKLQVSSHAELVH LGIDMGVVRVAG >PFL_1644 response regulator MLIAEDGAADRMLLSSIIRRQGHQVLAASNGAEAVQLFQQQRPHIVLMDA LMPVMDGFEAARQIKALAGETLVPIIFLTSLSGGEALARCLEAGGDDFLA KPYNPVVLGAKINAMDRLRRLQETVLHQRDQITRHHDYLLNEQRVAKAVF DKVAHAGCLDAPNIRYLQSPYALFNGDLLLAAYTPAGDMHVLLGDFTGHG LPAAVGAMPLAEVFYGMTAKGYGLPETLREMNAKLKRILPVDMFCCATLL CLSSQRRAVEVWNGGMPEGYLYRHASGARTPLVARHLPLGVLSAESFEDS TEVFSMAPGDRVFLLSDGVIDTCNTEEQLFGVERLHQVFAANRQEDQLFE EIRQALERFGGSARDDVSMVEVGLPEFPRLAPPALVYSDSGQSCPLDWSV SFEFRAATLKRFNPLPYLLQLLLEVHGLRSQSGALYSVLAELYSNALEHG VLKLDSRLKRDAEGFTRYYRERSTRLAQLQEGFVRVHLQVQPLEAGGRLV VRVEDSGEGFDVAAVLARPNDMERLSGRGVSLIRQMSQQAVWADDGRSVC VEFSWEALA >PFL_1735 methyl-accepting chemotaxis protein MSLRSLNIALRASLGFGLLALMVFALGAFALMQMGNMRQQSDEVESNWLP SVMSVGEMNQDLLRIRALTLRLLINRDPQAITQNENKINEIKSVLGVAQS RYESLILLPQERVLFDRFKTIEKQYLQRQERVMQLSSQNQLEEAVKVVNG EMNQLADEMAATLHELVELNKQSATHATDLAQAVFSKSRVWVIGMIALAA LVTIGLALLLTRSIVLPLAQSVNVAEVVAGGDLTGTITVTGRDEPARLLH ALKAMQHSLRETIRRISDSSSQLASASEELSCVTEDATRGLHQQSLEIEQ AATAVNQMTAAVEEVASNAVATSEASRESDRIAQHGREQVHQTVLSIESL AQDVTANASQVEDLAQKVYGISKVLEVIRSIAEQTNLLALNAAIEAARAG DAGRGFAVVADEVRALAHRTQQSTQEIEQMIGGIQQGTDQAVSSMQQSNN RAHSTLEVAKAAGQALEEIASAFTQINERNIVIASASEQQAAVAREVDRN LMNIRDLALQTSAGANQTSAASQELSRLAVDLNSMVARFSV >PFL_0690 DNA-binding response regulator, LuxR family MKVLVVDDQPLIVEELCEFLESSGYRCVPCQSSRQALECFNRDPEISLVL CDLHMPDMDGIQLVQELQRMAGKQRVFEAIMLTGQSDKQDVIKALRAGIA DYYQKPIDLDELLEGLQRQEVALQERQKNLHLGHLNQKLQFLSESIDDLY QDLDKVRRSPATSRSEEPRGEGAGEGDAIEIPAIFNQLSPRQLDVARLVG KGQTNYQIACELGITENTVKLYVSQVLRLTHMHNRTQLALALSPSNSGLR QRVTAH >PFL_5309 sigma-54 dependent DNA-binding response regulator PilR, putative MNPRQSVLVVDDATETRALVEITLGRMRLHTQSARTLQEARGRLARERFD LCLTDLQLPDGSGLELLRHIRQSHPNLPVALLSNGACAQASAGALQAGAC QLLHKPLDLKQLRAWVGASLKLATDCATDDPARQLLGDSAPMNALRRHID KLAHSLAAVYISGESGSGKERVARLLHQLGPRARYPFVPINCGAIPSELM ESELFGHCKGSFSGAVSDQPGLFLAAHGGTLFLDEVADLPLAMQVKLLRA LQEKSVRPVGSQQEKTVDVRILCATHKDLKNEVETGRFRQDLYYRLNVIE LRVPALRERRGDIPALAGHVLQRLARDSGQPAVQLRPEALQALERYDFPG NVRELENLLERAQTLCEGRWIETDDLQLPRADSLEARSSAAATQLDLALH LQQVERQLLLQALEETRWNRTAAARRLSLSFRSMRYRMKKLGLD >PFL_2597 methyl-accepting chemotaxis protein MSRDGSLAAPVAQPLATPETAARWWAPSLQSAALMALFAGQALGGWSLYL CLPVAVLVIWLPRLRGRGRPLVANATADDQLSALTRDLSYGTTHNALSAA GVAYSVTQLAGKLQSQLDAAARIVGNAEVMIRTEQVTSQLSQQALGAASE AHASSAEGRTVLGESISRMHLLSQRANGSRELIEALSQRSEEIQRVTLVI QSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAGRTAAATDEVG VMVADIQQRTSDVVEQIRQLADDLNLGVEQVEHTGRHLDNIARLAAGVEG QVSEIARGAETNREQLDSLFHAVEQMRSDLAVSDQQTRSLAQAAVQMEGQ AETISERLAAVGLDDYHQRIYDLAREGARRIAEQFEADLEQNRISLDDLF DRHYQLIANTDPAKYQTRFDRYTDQVLPPIQESLLPRHDGLVFAIACTQE GYVPTHNKVFSQPLTGDPEVDNLHNRSKRKFADRTGIRCGSHQQPLLLQT YTRDTGELMHDLSVPIMVRGRHWGGLRLGYKPEQAPGSGKG >PFL_4158 sigma-54 dependent transcriptional regulator MQLLTLPPSPALATSIRATAQVFEDPKSQALLAHLQQVAPSEASVLIIGE TGTGKELVARHIHNLSARRNRPFVAVNCGAFSESLVEAELFGHEKGAFTG ALSAKAGWFEEADGGTLFLDEIGDLPMAIQVKLLRVLQEREVVRLGSRKS IPIDVRVLAATNVQLEKAINAGHFREDLYYRLDVVSLELSPLRERPGDIL PLTRHFIEAYSQRLGYGSISISPEAEHKLKSYSWPGNIRELENVIHHTLL ICRNGVIQRDDLRLSNMRIERADDSHPSHDDSAEALLERAFEKLFAEQAG ALHEKVEDALLRAAYRFSHYNQVHTANLLGLSRNVTRTRLIKIGELAVNK RRPIDAPNERTLQLSI >PFL_1443 conserved hypothetical protein MLEAIGNDDLVLPTLPEVALQIRQAAEDPEISVSTLSKVIGRDTALSARL IKVVNSPLLRAAQEVTDLHTAITRLGVNYSSNLAIGLVMEQIFNARSEVV EQKMRDVWRRSLEVAGVSYALCRSYSQLKPDQAALGGLVHQIGVLPILTY AEDHYELLSDPVSLNHVIERIHPLLGDKLLRVWEFPEQLVEIPGQYLDFS RQSSRIDYVDLVQVATLYCHKDTEHPLSRIDAFSVPAFKKLGIDPDNKAM CLDLEESRSMLY >PFL_1591 sensor histidine kinase MRSLFWRILASFWLAITLVAGLSILLGHMLNQDAWILSRHPGLNSLTEEW TQTYENQGEDAAQDILQQRKRQYHIDVQVLNESGDPVVRGTFPRRAAAFE ARQNNDDRHLPWRRLTAEYTSPKTGDTYLFIYRIPHPELDAWHRDSLTWP LSALAIALVVLTLFSLLVTLSITRPLSRLRGAVHDLGQATYQQNSLARLS NRRDEFGVLARDFNRMGSRLQSLIGSQRQLLRDVSHELRSPLARLRIALA LAERAAPEEREKLWPRLTRECDRLEALISEILVLARVDADNASAEEVDLN ALLVAVQKDAQLACPEQPVLITAPPQLHLRGWPTMLERAVDNLLRNAQRF NPAGQAIEVTAQRQGEKIQISVRDHGPGVEAEHLSQLGEPFFRAPGQSAP GHGLGLAIARRAAERHGGSLLLANHPQGGFIATLELPLVPGAVVQA >PFL_0675 response regulator/GGDEF domain protein MTEPEDPSRERLKHHFAQRVIHQARQILEIWQRLQRSEWSTTDMSELCEA NLRLLRFAERFEQPEHTQLARSISQSLEAVDANRGRLSSNLITDLNRLMQ RLSRTGLRHGDQLEQTFLPPLRKPIYVMLQDHDRAERLAKQLEFFGLSAQ SLDSIPAFRSSMVERLPAAIVIDVDFCGAGMGLTLAAEAQVGLEQKLPLL FFSLHETDTPTRLAAVRAGGQEFLTGTLEASSLLEKIEVLTCVAQYEPYK VLIIDDSRAQALHTERLLNSAGIVTRTLIEPIQAMAELADFQPDLIILDM YMPACTGTELAKVIRHNDRYVSVPIIYLSAEDDLDKQLDAMSEGGDDFLT KPIKPRHLITTVRNRAARARNLKARMVRDSLTGLYNHTHILQLLEDCSFR ARREGKPLSFAMLDIDHFKRVNDSHGHPMGDRVIKSLALFLKQRLRKTDF IGRYGGEEFAIVMPDTDQDAACKVLDEIRQRFAEIHYPAQPQDLWCTFSA GVVEMQEDSDSLIMASQADEALYRAKHGGRNRVQAARSSQSAIFSSESTD SVITL >PFL_0089 EAL domain protein MPAAREPLRTWFHRPWTLAMLAAVLSAVILLLGSAGLAMHQVQQRESEQM NAQGQRFLERLEQLFGQLREGLDVLEAQPLRECNADLIAALQQVSYSYRF IYEAAYRDATHTCSNWPRQNLLPAARPPDIRGPTYSYWLNTSTQPNENLA ALMLGRGNFRVATSRGHLTDVVDLPPGGSLMVVVDHGARAIPVLGPARAW PPAQPWRGGRDGPLQVTPDLLIYRMPTRNPEYQLVLITPRASLQGEVLDG WWWLLPSSLVLALFIGGLVYQLVRQRQSLGAELQGALRRGELQVLYQPIF DLSSRLCVGAEALLRWRRPDGTLTSPDLFIPLAENTGQIRQITDFVLQRL LEQLGHVLRANPQLYISVNLAACDVMVPRIGMVMARLLATHRVAARQIAF EVTERGLIDVVVARNNLQALRDVGHQVLIDDFGTGYCSLAYLQSLPVDCL KIDKAFIDALGHDAASSGVAPHIIRMAHALKLKVIAEGIEFEDQALLLSS EGVSFGQGWLFAHALSALQFTELITRGRRLVARRVDDEA >PFL_4784 methyl-accepting chemotaxis transducer MNKNLRFSHKILLAASLIVIAAFALFTLYNDYLQRNAIRDDLDNYLQEMG DVTAKNIQTWLAGRALLIENISQSVALNTDPANVSNLLEQKSVSSTFMGA YLGNNDGTFIIRPNSKMPDGYDPRARPWYKSAENSSGSALTEPYIDLASG QLVISIVDSVIKAGQRIGVVGGDLSLQVITDSINALDFDGMGYAFLISAD GKILVHPDKNLVMKTLKDVYPQDTPKISSELSEITVDGKPRIVTFTQIKG LSSVNWYIGLSVDKDKAFAMLSEFRTSAIIATLTAVALTIALLGLLIRLL MQPLHVMTRAMQDIADGEGDLTRRLNIHNQDEFGILGTAFNRFVERIHGS IREVSSATEHVNEVALRVVSASNSSMLNSDEQASRTNSVAAAINQLGAAA QEIARNAAQASQQASDARNLAEDGQQVVDRSIQAMNQLSDMISASSSNIE TLNSKTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADE VRNLAHRTQESAQQVQGMIEELQVGARESVSTMSNSQRHSQDSVEIANQA GERLNSVTQRIGEIDGMNQSVATATEEQTSVVESINMDITEINTLNQEGV ENLQATLRACSDLEQQAARLKQLVGSFRI >PFL_2328 methyl-accepting chemotaxis transducer MFSNLSISQKLYAGFGVVLLILLLLVLAALRGFDQVSSSVKSTIHSHEVL NQSDALLRSLINIETGMRGYALTGRDSFLEPLEQGEKAFTDYYARIKSST ADNPEQQARLERLKALHDQWLREDIQGNLALRRAINAGTQPATAMAEQIS AGRDKAKMDAMRQLTNELREAEKSLQDARSQAMDNAKASALAILLGGGML AALLAMLVAWSLSSNLVGRIRQSVEVAEAIAAGHLDNRISTQGRDEVSEL QQAFAAMQERLRSMISQIKLGAEQLVSASQSISSASLQLSASAQEQSHSA SSMAATVEELTVSINHVADNAGDAHALSSESGRQSEEGGSVIQDTLGSMR LIAETVQASATQIGELGQHAEQISSIVSVIKGIAEQTNLLALNAAIEAAR AGEQGRGFAVVADEVRLLAQRTANSTQEITEMVDKIQLGTREAVSSMDVG VNQVKSGVEQAQQAGEAIVNIRTSSGNVVRVVDQISLALREQTAASQDVA RNVERIAQMSQQNSQAVEETTETARSLQQLAQNLEQQVNVFRL >PFL_0664 sensor histidine kinase/response regulator MRWLRIALGFTVTLLTLLCLNPALAAQGSGWAVLLDEQADLQLSDIRSPR YTNQFSPIELDKLTAAEPDGALWLRFKLQPGTHEQILRIFAPDLSHLNLY VLEGDKLIEQVNTGSGPSQAQKPLPSSDFMLPLPQSAKPLDVYVRLVSEH ELRPFITLQSAVMGAADQSQTLIYGLLFGCLAMLILHNLTRFAYTRSRSS LWLAACEGLLTLSLLMLLNLFGPWLPAWEALQTPGAYIALLLTAPCGMMF AYRFFAPLGAHPLNRLLLGNILLISLFGLLLLFVDTLPLNIITYGLVALA GLSMLFVGGYHWHKGYRPARLFVAAMVIFNLGTLVILPALLGLTLVAPQG LIVTLLSVVCIAGLLMSIALGERQRNITENRFSVSRDLAASTAEVNAKAE FLAKISHEIRTPMNGVLGMTELLLGTPLSVKQRDYVQTIHSAGNELLTLI NEILDISKLESGQIELDDVQFDLNALIEDCLSIFRAKAEQQNVELISFIQ PQVPRVISGDPTRLRQALLSLLENALKKTDEGEVLIVVALDERSSKPRLR IAVQDSGQPMEAEEREALLHTELHSKNFLATTRLGGNLGLVIARQLILLM HGEFGIKSGTNQGSTLWLTLPLDAERLEHPTADLDGPLQGARVLVVDDND TCRKVLVQQCSAWGLNVSAVPSGKEALALLRTKAHLRDYFDVVLLDQNMP GMTGMQLAAKIKEDPSLNHDILLIMLTGISNAPSKVIARNAGIKRILAKP VAGYTLKTTLADELNQRDKAPAAPYNQPAHAAQTPAPVTVPSDFRILVAE DNSISTKVIRGMLGKLNLQPDTASNGEEALQAMKANRYDLVLMDCEMPVL DGFSATQQLRAWEVGNQRVRTPVVALTAHILAEHKERARQAGMDGHMAKP VELSQLRELVEHWVTQRDLRERSTAHTS >PFL_2211 sensor histidine kinase MSALWRINLWVTAFFAVVTLACAALLLHQAVADVERELQSAEAVVEYLSD SAERNPAGLQPHLTQSLRHVRVHWLAPDEAVRMPEQAGLDAWLGRQLFSE RRHNARELDLGDGRRVLIAVDARDEIDEVWDSLQQLLSLCGLALLLSLLT IRWAVRRGMGLLDDLLRALQQVSGGQLAVRLREAGLPEARQLAGHFNRMT ATLEQTRADNAQLTQALLAVQERERTYLAQTLHDDLGQYLAGIRAQACLL RMVSNQPTVVEQTAQALELNCERLQQGFRALVQDLYPVVLQHLPLAEAFG LLVSQWQDSQGIDCQLRVGADLPALPGASKTHLYRLLQEALTNVARHADA SQVRVRLQRSARGLRLLVRDNGCGARQPQRPGVGLHSMAERARSLGGELH ILSRPGAGWALALNMPLNMPMEA >PFL_2987 response regulator MPAEHVPKPYTLLAIDDDPQSLIVLSKTLTAEYEVLLAKNSERGLALARS ASPDLIILDILMPEMDGFQVLSELKSHPATAAIPVIFLTSRSSVEDERLG LLLGAADYIAKPISPPVVLARVATQLGYRNKPLHDLQAVAGPCAGSDMRD GFVSALTLQLAGNPQIRLQALLDTLSILLRSSPSRRDPAALRSAACLALM GLNQPGSRIDQALGHSRLLIEEILAHAEPEDPILNLAWKITHADALLKGP GELDTCERLSLSARLFALALNYHLSLLQASTEDLHSRHAQAMGQMYRQPG FEQCIAGDPEPLSAALLSSSQSFFGR >PFL_1134 methylesterase, CheB-like MKIAIVNDMPMAVEALRRALAFDPSHEVVWVATNGAEAVKYCAELTPDLI LMDLIMPVMDGVEATRRIMAESPCAIVIVTVDRQQNVHRVFEAMGHGALD VVDTPALGAGNAQEAAAPLLRKILNIGWLIGQRGSRVRSAPQPLRSGAPR QSLVAIGSSAGGPAALEVLLKGLPKDFAAAIVLVQHVDQVFAAGMAEWLS SASGLEVRLAREGEPPQSGKVLLAGTNHHIRLLKNGTLAYTAEPVNEIYR PSIDVFFESVASFWNGDAVGVLLTGMGRDGAQGLKLMRDQGYLTIAQDQN SSAVYGMPKAAAAIGAASEIRPLDKIAPRLLEIFAK >PFL_4015 DNA-binding response regulator MRLLVVEDHVSLADELLEGLNRQGYAVDWLADGRDALYQGASEPYDLIIL DLGLPGVPGLEVLRKWRADGLATPVLVLTARGSWAERIEGLKAGADDYLS KPFHPEELHLRVQALLRRSHGQANQQTLQAAGLHLDEGRQCVVRDGQDVL LTAAEFRLLRYFMLHPQQILSKSHLAEHLYDGETERDSNVLEVHVNHLRR KLGRSVIETRRGQGYLFGGTAS >PFL_3686 EAL domain protein MSTLSVLLLCSNAFRVRHFSRILASCGFARVQVISDDCDGAQFPPALDEL DLVICDSLHSLNAIPYLRRLCEHHGFFSMMECEALQAPIRWGLANFRVRS GKYCVGSYNELDTLQISALLLKALAIKRTVKGHARDDAPGAAGAGCANND WVAELDVSQALEQRQIVPFFQPQVCMKTRRITGAEVLARWQHPHKGVLGP QFFLDLFDSPQGHRQLFDCLLQQGLALQRQLQGHVSGDALMFSYNIEASQ LSDPQFALRVLQQIDEAQVPTRQVTLEITERQALVLSMQCIENISVLVHS GVRLSLDDFGTGHSSIMRLADIPFGQLKLDSGFVANATGAKETRIIEAIV GMAGALNLELVAEGIETEKQRAHLQRLGVDAAQGFLFYKPMNAAALIRVL TLSRPPQRQIIQS >PFL_5051 heavy metal sensor histidine kinase MPSNSIALRLSGLFTLVALLIFLLIGGALYQQVDKGLGLLPEAELDARYS VLESALTRYGNPEHWAKINAKLKLLSEEDKRIRFWAISGDPGYEYGSPDA QIREFAQGPLGMRDLNLSDHPYPLKVLVSQLPAKEQRPTLRFLIAIDTDT FHQTQHQLLMALIGLAIVGVLLASALGYWVARIGLKPLIKLSQEAQRLAP PRLSGRLQLSPLPPELKQFVNSFNSTLERVEHAYSRLESFNADVAHELRS PLTNLIGQTQVALTRGRSAEHYFEVLQSNLEELERLRSIINDMLFLASAD QGSKATKLTTSSLAAEVATTLDYLDFILEDAQVRVEVQGDAQVRIEVAHL RRALINLLSNAVQHTAAGEVIQVRIEVQEHQVAIAVSNPGQDIASEHLPR LFERFYRVDASRSNSGANHGLGLAIVKAIALMHGGDVFVRSDRGINTFGL YLPL >PFL_3269 DNA-binding response regulator MPNILLVEDDTALSELIASYLERNGYQVSVISRGDQVRERAKASPPDLVI LDLMLPGLDGLQVCRLLRADSATLPILMLTARDDSHDQVLGLEMGADDYV TKPCEPRVLLARVRTLLRRSSLSEPQSASDQILMGNLCIDLSERTVTWRE QLVELSSGEYNLLVVLARHAGEVLSRDQILQRLRGIEFNGTDRSVDVAIS KLRRKFDDHAGEARKIKTVWGKGYLFSRSEWEC >PFL_6174 RNA polymerase-binding protein DksA, putative MTEQDLLAQPETHYMNEAQQGFFRQLLLAQRSDLQERIAGEFDQLREQEP HSDPADIGSAEEQRQWQLRLLEREKKLLDKIDEALERLARGEYGWCRDTG EPIGLKRLLLRPTATLCIEAKERQELRERHQRAL >PFL_3959 protein kinase domain protein MLTLFMDTLAQLRAGQLAGIKRLDLSCGLTEFPREIFDLADSLEILNLSG NALSSLPEDLHRLTRLRILFCSDNRFSEVPACLGQCLQLSMIGFKANRIE RVPAAALPPQLRWLILTDNRIAELPEELGQRPLLQKLMLAGNRLTRLPES LGQCHRLELLRIAANRLTELPPFLLALPRLTWLAYAGNPLESEADATALA STPSIPWSELTLEQRLGEGASGVIHQAQWQPAGQPPRAVAVKLYKGEMTS DGSPLHEMNACISAGLHPNLIRVEGRILDHPQGQNGLVMQLIDKSFANLA ALPSLDSCSRDIYPDDARFNADVTLGIARGIASVGAHLHAQGITHGDLYG HNTLWNAQGDCLLGDFGAASFHAQDDTVQSRALQRLEVRAFGILLEELLE RGDGSLSLEQRQKLAALVQRCCQPEVLARPGFTQVCEELAGL >PFL_5515 conserved hypothetical protein MLVALSCCSVRAAEPQAQPRHIRIASEVWSDYTEANGEGLGWDILREVFE PLGVTIERCSVPYTRSVGLVQRGEVDAHMGAYRDESPGVLYPHWNYDTDH IYALGLASNPELSLATIASYRLVWVRGYKYQDYLPNIRRYNEIRRRIGIL PMLLYSRADYYIDAQTEIDYVLGQASDPSQFKRTHLTELPLYLGFASNPR GREMRELYDQRMAQLVSTGRLRPIFERWKQPYPFDGSP >PFL_0010 CHASE domain/sensory box histidine kinase MSVWRRRAEGREPTQAQRLFRGLVREWLWVSLILLPLTAVLSLSHGLALN NLFYDNLRRFTPLPVDPRILLVTIDDYSLQQLGRWPWPRAIHGQLLDRLS AAEAKGVLFDVILSEPGSTVENDTRLAAALCRAGNVFLPVLRQGVARYGQ DIEEIPPVPLLRNCARGLGHINAEADADGTVRSVYLREGPMLAPRAQLTW LLYQLTEAEPAFPHMPGPGEPRVAQGWLRSNPVRIPFISADAGFPSVPYV SVLRGEVPPELLRDRLILVGSTAPGLGDRYVTPQSGSQGTTPGVEIQANL LNGLLQHRSVVALGQWSGMLLSMALTAVLLGLLLWRPRHALWITLGCMGL GLAGSVLMLRLGYWWSPVASLLGMLLAYLIWNWRRLSVILAYFGWELARL DSEPKVLPERRRSQAPAGDVLQGQIVALEQALSRTRDTRRFIADGLEYLP VATLISDPDGKILLANRNAREVFAHSLVGEGLIAQLAALGYPGLTEPALY PRLEQLPAVEFRDVQQRSLRMELAPLLPVDSDTAIGWLLSLTDLSVERDA EQQRSVLLRFLSHDLRAPHSAILALLDVQRHQPATPRQVYGQIEQQVRRA LALTEAFVQLAKAESEAYQFEPSMFAMLVLDAFDQATTLAQLKDIHLEHD LDDEAEGLVLADQSLLTRALFNLLENAIKYSPVESRVSVRVSCTPGWLRC EISDEGRGIDAADLPQLFGQYQRFASAKGIDGLGLGLSMVKAVVDRHQGR ISCQSVVGRGSCFILELPLLEE >PFL_2926 sigma-54 dependent transcriptional regulator MSLITHPNARELTKSVRATVLVFKDPRSQELLSRIERLAPSEANTLIIGE TGTGKELVARHIHHLSRRGREPFVAVNCGAFAETLVESELFGHEKGAFTG ATTHKAGWFEAANGGTLFLDEIGDLPLNMQVKLLRVLQEREVVRLGSRTP IPINVRLVAATNVNLADAVVAGHFREDLFYRLHVATIRLPPLRERPGDIL PLAEFFLEEHCQRLGYNRASLTEEAERKLLEHSWPGNIRELENAIHHALL VCRQQRVAPGDLHLVDMRSSGIRQEQAPLAVPGPQAPADLGRALQALFEQ NIPDLYEHIEETIFREAYRYCHGNQLQTGRLLNISRNIVRARLEKIGELN KPLATSAS >PFL_1973 anti-sigma factor antagonist MSTGRIQFAEQDGTFVLKFVGEVRLTLCSALDATIERIFTALNFSAIVID LTETRSIDSTTLGLLAKLSILSRQKVGLLPTVVTTHEDITRLLQSMGFDQ VFNIVDRPIPCPECLTDLPSQDQSEEVVRVKVLEAHKILMGLNDSNREAF HDLVNALERH >PFL_3314 sigma factor regulatory protein, FecR/PupR family MDPRPGGRLSHACLQQAAHWYVQLQDQGSSDEQRRQWQDWFEQSAEHRQA WSYVERVSQRLLPLQEANTRPSASRALSAARHPVLARRQVLGALLLAGLG WGTWRNSPLPQALSRWRADYATGTGEVRDTLLSDGTRLWLNALSAVDVRY STEQRLLALHLGEILIDTAKDPRRPFLVQTEHGRLRALGTRFSVRCGASD SLLNVYAGAVEVRSASGLQVQVVNAGQQLRFDGRTLGPLQAASAAREAWS HGLLLADNLPLEQLLEELGRYRNGHLGCDPAIAQLPVMGSFPLHDSDQAL ALLEAALPVRVKRLASWWVTLEPRT >PFL_4062 conserved hypothetical protein MLYVGYPKLTPAEHLAHLPVLQLEPAPADLGQVLHAADPHQPPTRIRLTT VAGQPRYILEYPGPRKVAVDSQSGLPAAPPDRVEALAAARQFAPEAVARD RGVVQEDMWSLSRALDADRPLHRVAIADAERRLLYISGTTGEVVRDATAS ERGWNWIGAWLHWLYPLRGIGIDGAWGPIVTYLSLAATLMAVLGLAVGVL RWRFKRTYRNGSHSPYQGFARWHHLGGMLFGVLLITWIFSGLMSMNPWKL FSSAQPLSVAAYQGGPLGALAFPLNAGQVLQRFADDGLQARELEWRMIAG KGYVIGYDGAGRTRIFDMAGDRVQRRFHPGTLQQAAWAIRPGQPMLVEQL AAYDFYYYAREPQSMMGHLQQRLPVLRVRFDDPAHTWLHLDLHTGAIVGQ LDQPRRASRWLFALLHSWDWLPLLANRPLWDLWMIAFSAGGLLVSASGVV LGWRRLGRSLQRR >PFL_6030 GGDEF domain protein MVLISAPSWESVSRLFEDDRNAVLLTLPHLQPGPGRCSLPTVLLLDQEPP VAPVGVSDWLVSSCLSTDALRRCLRHVRERGLLENTLQRLAEQDPLTGIA NRQGFQTLLAARLAENEGRGLALGHLDLDNFRHANDALGHQAGDRLILQV VSRLKSQLEAGDQLARLGSDEFALLIDTRRAPQRAEWMAERITEAMAEPY WVDGESLLIGCSLGIAHARANAGADPLMWHAHIAMQQAKSTQGCTFHIFN ERINRNARSLADLESELRRALRRDELELHYQPRLNLHDGKIVGLEALVRW RHGERGLLPPSEFVPLAEQSGLIVPLGYWVISRALRDMQALRERGLPPLH MAVNLSFRQFQDSQLLSTLSRLIAERGVEAQWLEFELTETAVMRRSDLVK QTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPITLLKVDKSFVGGMEQRE ENRKLVHAMINLAHNLNLNVVAEGVETAEQLALLRGFGCDQAQGYLISKP LPLAELMDYLTFGSSQQALQEGTV >PFL_0885 DNA-binding response regulator, Fis family MSEEIQVEGEELPHLLLVDDDATFTRVMARAMSRRGFRVSTAGSAEEGLV IAQQDLPDYAALDLKMDGDSGLVLLPKLLELDPEMRVLILTGYSSIATAV EAIKRGACNYLCKPADADDVLAALLSEHADLDTLVPENPMSVDRLQWEHI QRVLTEHEGNISATARALGMHRRTLQRKLQKRPVRR >PFL_5262 cyclic nucleotide-binding domain protein MYLMGEQPAYADALINRLQSIPPQLLDGLAPSGPTLELGPIAELSSVLPG DQLFLLASGVIQASVEERPLFYLHEGDLVGLRRGIELPQWQLHCDTPLQL IPYLRTEVFRHIQADVQRSELLVQYLIGQTALLSDAIARLKPPELRSSNG FKRVEAGERLITQGDEADHVFVILEGHAQAFVDGHKVGDVPKDEIFGAMA VFTGEKRSASVIASEPSTIMLIPKDQFLSLTQSNPRIAHSLIESMARRID LLNKEVTRLMTLNNPN >PFL_3638 DNA-binding response regulator, LuxR family MKKIRVALADDHPLVLAAVSDLLKKTRQYEVVAAVTTPSALVQQLSDDPR IDVVITDYFMEGDPTFGDGIRLVTYLIRHFPRVQVLVLTMMSNPMIVAAL YDIGVRSVLPKRHDMSELLSALENVRQGRIHHPPSLVQNELNSSPLRSMA DGLSSLTPKEYEVLRHFVRGESMMQIAANLKRSVKTVSAQKISAIRKLNL DSDQALVAFCLESGEFQ >PFL_0707 methyl-accepting chemotaxis protein MNIKQKLTWAFAVIASLPVVLVATLVVINLRSEAENTFVDGSGREIRQVA NAMQLFFEGISQNIDYLAAQPLITQAGDNLKTWMSADAAKAPEGEQDKRI FELFAAMAASHPAYSYVSYGVSNGGYVSWPADLKLANYDPRVRPWYKTAQ ANPGKTLRTEAYYWASDDAVLVSTVRSLANQLGPQGGVVAVDVSLKQLTE IVKQIKLGESGYLMLMENNGTVLVDPKQPEHNFKALGSLGEGYAQLAKAG KGLVQVELGGEHYMANVWPSEQLGWTFIGLIKQNEVMGAATQLTWIIAGI AAILAVLFAVLGASFASLIVRPIRGVASGLEGIAQGEGDLTRSLNIRGSD ETAQLANWFNQFLAAIRNLIQSIGQAAQKILATSHSSTQVSSDMAEAAGR QREAVDMVSTAFHEMVATANEVARSCSQAAESADSGQRQAREGQQQIDDA VHSVDRLSQEIEQSAQSMQQLERDSTDIQSILGTIRSIAEQTNLLALNAA IEAARAGEQGRGFAVVADEVRALAKRTADSTAEIDGLLGNLAKRTSAVTQ QMHASLEVSQQSVNRIGLARNSFGQIRESVDVIRDMNTQIATAAEEQHQV AEDINRHISQIHGDAQLVAELANSARLDSQSLAGLSNELDALVRRFKT >PFL_0418 methyl-accepting chemotaxis transducer MYRWLARNLGNVSVSLKLGIGFGLVLLLTLLITATGWTGLGRVIDRGDKL GNISVIYALTKDLRIARLNYEMSRGEHGPAAVNDFLKQLDDGLQDARAQL QQPESITMVDQQLDAVAEYQKAFADMTRATANREAARSQLGATADNAVAR VAEVENSLLQGDSVAQFNSVIDLSKLIQQARFQVRGYTYSAKPEAKQPAL DAIDNALNNLTSLPSRLPEQHVANLQQASDSLKAYRMAVSAYSDAEEASA AALKRMAAQGDRLMDLSKQLTVAQTTKRDSDAAQAKSTLLIATLLAMLFG LIAAWAITRQITQPLQQTLKAAERVASGDLSQNLAVERRDELGQLQKAMQ RMTVSLRELIGGISDGVTQIASAAEQLSAVTEQTSAGVNSQKVETDQVAT AMNEMAATVQEVARNAEEASEAAVAADQQAREGDRVVNEAIAQIERLASE VGHSTEAMGHLKQESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAG RGFAVVADEVRSLAQRTQQSTEEIAELIVGLQSGTQQVASTLDTSRSLTD SSVELTRRAGGSLENITRTVSAIQAMNQQIAAAAEQQSAVAEEINRSVLN VRDVSEQTSSASEETAASSAELARLGIHLQSLVGRFRV >PFL_1106 response regulator/EAL domain protein MHSLKVLILEDNSFQLMALHQMLNANGVFNVLTAESVEAARRSLDSKGPV DIAICDLYLEQADGLELIRDLARQERARALIILSDAEEDVLEGAAGMARE LGLKVLGCLPKPASVTVIGDLLTAYQQHSRQGAPAPDQALLRDLLGLEPF SLDSVTQEEGLAAILGHGVAHFQPVIQPHGELQGVEALARWQHPERGLLM PGEFLPLIEFAGLQEIFTWHMLEQALELAAGVKLVMGHSLPVAVNIPIGI LERPLFPRQLEALLRRFEVPARLLTLEIIDTTRLQTDTAHVEALLRLRMI GCKLSIGDFGIGGTSLQRLLELPFTELKIPPVFVAGMAADERKVALVGGA MNMARRMSLGVVVAGIESEADYKAAKALGAAHLQGCFLAGPMSAAQMRQW LAQALDRGAEGAGAEGLCA >PFL_3247 response regulator MSEDAQDVVLIVEDEPVILMLLADYLSGLGYRVLQAENGEQAFEILASKP HLDVMITDYRLPGGITGVMIAEPAVKLRPDLKVIFISGYPNEILECGSPI TRKAPILAKPFDLNSLQEQIQQLLA >PFL_2198 amino acid ABC transporter, periplasmic amino acid-binding protein MNNVLRFAGACALVIAASTAQAETLKIATEGAYPPFNYVDSNNQLHGFDV DIANALCKQMKVECQIVAQDWEGIIPALLAKKYDAVVASMIATDERKKKI AFSNHYYRTPLSVAVAKDSDITDAQTNFKGRTVGAQASSTQAIYAEDHYG PAGADVKFYPTLDEANSDLAAGRVDGVIADKFPLLAWAESTGKDCCKIIG DVNGTTADASIAVRKEDNALRERLNKALDEIVADGTYKQISSRYFAFDIY >PFL_5379 sigma factor regulatory protein, FecR/PupR family MNSQGPQERSITEAAADWAVRLYAGGLSATEQAQLAQWQAADPRHPQALV FARQTWEALGELRLDPELAATAPPRRQAARPAATIPRPRRRRRLVRAASV AMLVLAVALGWLQGPQALLYLQADYLTGKGEVRTVQLADGSQVELDSGSA IRLDYSGDKRQVQLLAGSAVFDVAPMAGEEKRPFIVQSAGGQTRALGTRF VVGRESAQQAWVGVLQHSVAVSLDAPAQRGASERVLQEGQSVRYDPQSGV VALDGLDLQRATSWRRGVLVFDRQPLGLVVERLNRYRPGRVVLTNSALAQ RQVSGVFRLDMLDAALVTLTQELQVQRFDLAGVSLIY >PFL_2957 DNA-binding response regulator, LuxR family MSLAVNKPLRIAVLDDHALIRMAMQLQLQSVADFQLVGLYASSGELISAL RDTELDLLVLDYQLQECDLDGLRLIRLLRNKYPHLLILVSSATETPFFVK QIIDIGANGFLGKSQSLDDLIPAIRTVASKRLYLSPLLAFAVQHPPIGPA AEPGSPPLTSLETLSPKENEVLRCFLDGLRISQIASKFSRSIKTISGQKQ AAFRKLGIRTDAELFKVQRKLDLHIASREPAEDAFHDEASEPTLPPTRST I >PFL_4590 methyl-accepting chemotaxis transducer/sensory box protein MFNLHHKADLLEIERFNCALSEANAKLAAISRSMAMIEFSPDGIVLDANE NFCQVMGYSAEDIRGKHHRIFCEEEFYRSEEYSKLWRDLGRGEPVSGTFL RLDKRGREIWLEASYMPVFDADRQVRSVIKVASDISERIHVEHENQSLLN AIGRSMAIIEFSPDGRIITANDNFLKTMQYTLNEIVGQHHSMFCHRSEAE SPEYRQFWASLNRGEFHSHRFERENKYGQTVFLEASYNPLFDTKGRLYKV VKIASDITDQMTTLRSAAESAHSTSVQNDACAQKGSEVVQQTVEIIQQIS HDLNEAAHSIDAVSKQSDIIGSIVQTIRGIADQTNLLALNAAIEAARAGE HGRGFAVVADEVRSLAARTSQATVEIVEVVRKNHDLSTSAVTSMQSSLSR TGLGVELANEAGEVILEIQQGSRHVVDAISQFNSTLQLQ >PFL_4326 bolA protein MTMQQRIEAALGALQPEHLQVLDESHMHSRGLETHFKAVLVSEQFAGLNS VKRHQKVYATLGELMGQFHALALHTYTPEEWSKIGVAPASPTCAGGSQH >PFL_1493 cyclohexadienyl dehydratase, putative MLPRLLLCTLLGLSAPALSFAQEPSSHLDQVIERGHLTVCTTGDYKPYSY LRDDGHYEGIDISLAESLAESLGVRVKWVNTTWKGLMADFQSQQCDIAVG GISVSLERQKKAFFSQPLGIDGKIPLVRCQDLKRYQTLEQINQPEVRLIE PPGGTNEIFARAHLPKASLTLFADNVTIFDQLLTHRADVMITDASEARFQ QRHKPGLCAVNPERYLQYSEKAFLLPRDDVAWKSYVDQWLHLSKATGAYD RVVNQWLAAPSS >PFL_4820 conserved hypothetical protein MRLWLGNTWVGWLLLLCLGPLQAAPSVDDGAAARALLEKALGYYHDQGDM AFAAFSRQGEFVDHDRYVFVVDTQGVMLASGGPSSALIGRDVSQVLGPDL RKAFKQALKTPEGNGIQQAEYRWQNWADGKIERKHVYFQRVGERILAVGY YQPRASAEQARALLERAATALSTDRNGTLKAINQLQGGFLEDDLYVFVVD MDSRRYLAHGTNLRLLNTDFAKIRDPEGKPVGEPMLALMAREDQGEYQYR WKNPVTGKVEDKHAYLRKVGNLLVAVGYYSP >PFL_2956 response regulator MLKLRVGVLEQHNIVRHGLYKHLSRQSVLCLSEFFNFADMLEALEQEQLD VLMIGHLMDSDPVHLVRNLSTRYPDLKILVLLNRPDPVIASQLQAVGAHG VMSKTQSLPDYADALRSLARGERYAMLSDGRASMEKPLYDA >PFL_3193 sensor histidine kinase/response regulator MRLKSYLHQINPLFSSPEAARRLLRVVALIFLVGLFGAVYNFLRSSLHNE LSQRQSYMSSAIAEAQAFFTSRSALLESLSLAAVYDPGEHISPPGASGAS QEETYLQLGGPQGNQWGIWLTLRMRNYLQNKQLNLLYIPGTRDLQVQRLF STRPQTSDLPGGLLDKLIALKPEQIPVGEELWLMDNSAAGAHLYIFTRLD ERFAHSGWLGLEMDGKSVSAALSDQSAGDFMMFNSQGGLIFSSAPSARLS ADVRHVQGGSFFGFLGGRWWPDHLVIRKQLGATDWQLVYSFDLQNLLKSL WPQLLAALLISLTGMALIGLLTHWVEVRLIAPALHRIQALVESEAFSRDV IQIAPVALCVLRRSDGRVVLENTLSQQWLGNGSERDQLCSGWIEQAFDPA RPNSSDYFETADGRHLYLSSAPTRYNGEDVLFCAFSDISARKQIEAALEE AKRLADTANEAKTLFLATMSHEIRTPLYGVLGTLELLSRTQLDNQQKDYL QAIEGSSGTLLQLICDVLDVSKIEAGQLALELSEFSSLDLVHEIIQGYAA AAQAKGLQFYACVDPQLPEILLGDVTRIRQILSNLLNNAVKFTDTGRIVL RVRTESRDGERSNILWQVSDTGRGIAQDDQTLIFEPFYQTEGNTNVIAGT GLGLPICQRLTQLMNGNIRMVSELGLGSSFTLTLPLEASAVQGDTPLISP LLPEMVYVVSPVRELAESVAGWLRRWGARAQFSLPSPSDRARGNVLIELH PGSVEQRLEPDWQGPLVLASGDGHNEPRIDGGSWQINTNNLRAIHQAVSQ AQGVWVAQSEDHSDHRELKKLSLHVLVAEDNVINQLILKDQLEELGCSVE LASNGEEALCIWKAGRFNVVLTDVNMPKLNGYELAQELRRQGCSIPIIGA TANAMRGEEELCLAAGMNHCLVKPFALRALFNYLAPYERAPHEVL >PFL_5046 aerotaxis receptor Aer-2 MPSAAFAHMWRTLKRGRSWMGMVKNRCKNGDHYWVSAYVTPVTRDGQAVE YQSVRTKPSVRQIEAAERAYAQLNGAGPSWWSLLPVISLRLRLWASISAG FIGSYGVSVWLLPESWMVQGAVMAMGWCLSLTAVGVQARPLDRLAERARQ IGDNPLSQGIYTGRTDEFGRIEFALQMLEAQVGAVVGRIGDASQRLEGHA AELVEHLHSSHNSTLEQQAETDQVAAAIHQMAASVAEVATHAQQASVAAD QAESETREGHLLVGESRSAVLRLASELERATEVIHQLESHSTDISGVLEV IRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRGLAQRTQDSTNEI QRMISTLQMGARNAVEAMQHSSQHLESSVDQAKRAAVALDGISQRVNQIT EMSLQIAAAVEEQSAVSEDINRNIIGIRNACEATVSAGQLSHVNSGDVAG LAGDLRQLALEFWHKRG >PFL_3194 response regulator/EAL domain protein MKSCSILIVEDQPFQYMYLQHLFNELGPYQLEVASSGKEALERLKQRHFD LVLTDLLMPGMDGVQFIQSLATHRVRPALAIMSASSRRMLMGASLVARNL GLKVIGLISKPVNLAALRALTAQLPGLANDSSPPQIGVECSPETLREALR NGQIQAWFQPKKALNNGRIVAAEALVRWIHPQHGMLLPCDFLPALTVARL EEELLWLILEQALEAQVHWREDGYDIPVSINLPTHLLNSADLADRLYDFV IQHNGVPARICFELMECSTPEHISNFYAGACRLRIKGFGLSQDDFGKGYS SYMNLVSTPFTELKIDRGLVQGCHNNEEIAQALTCIIALGRQLGLTVVAE GVESAHELALLRKIDCTQVQGFLISHAVSSQQFQQLLAQDGPATVY >PFL_3041 conserved hypothetical protein MTDSASQAEEYLMMQAAHWCMRLREADCSLAERRAFEDWLQSDPSHAFEY AKMLEAWDLTGQLSPTLPSL >PFL_0630 sensor histidine kinase MRLSDFIVQHVDRIVDEWEQFARSLAQDSLTRTDLRDHARSILLAAARDM CTAQSPGEQRAKAKGEGPEKTPSLDAAAASHGELRHHVGFDLVQMTSEFR HLRACVIRLWVASLQTPDLAYLQDMIRFNEAIDEALAESTAAYAEQVSRS RDIFLAILGHDLRAPLQAVSMSTEMLARKVALDGDAQAFVSRIKSGTRHM GAMVSDLLEFVRSRLGSSLPIEPAPMDLASAAKAAMDEACAGQPDCTPLM SFEGDSHGIWDRGRIEQMLQNLIGNALQHGNNRRTVTVTITGGAEQVLLT VHNYGTPIPPEALGTLFDPLVRSVDEELGNPSTSLGLGLFIVKEVVVAHQ GSIEVSSNASDGTTFTVVLPRVSRASA >PFL_4947 hypothetical protein MTTITATIVNPYPLSAPKTASTEAEGNSASPLAPVDDSKDGQDKELRVNS GDANIDAVKAGGDPVKALQKQIEQTQKTLTEQQAQLANVQKGQASDEQKA QQVMEVQAQIAVTNSTLQVLQAALLQAMFSVDVHA >PFL_2903 sigma factor regulatory protein, FecR/PupR family MSEQILSEAEYDAITQAAAQWCMRLHEPDCSDAERLAFQQWHDADPLHAF EYEAMREIWEVADQLPPSTLTAAPAPAPVKLVPRRTWQQYGVAAAIALCA LPLAAYSGWELGWVPSSYQRFEAGDSLRSVTLADGSQVQLNLGSTLTYSN YKDQRRVTLKKGEAFFKVSHDASHPFVVKAANGQVKVTGTQFNVWMYEDQ VRVTLLQGSVLVSSNTALPGEGFRLEPGMQASYKAGDYQPQISQTYSNDS SLAWREGKLVLDNLALTDALPLINRYLDTPVQVADANTGKIRVGGIYNTR EIKSLLTSLPKVLPVYLTRNRDGNPVINSLPQSPPKS >PFL_2895 methyl-accepting chemotaxis protein MPALRTIQARYTLFLVLFIVLMLILTVVGISQLVAPKLRHTEEQVALNRI AEVAQRIQGELNKVQAQQRSITQTIPLLDSDSIDKVLPGLVDQYGEQKVF GGGIWPLPGQRTPGRNKHSTFWHRDASGKLVVNTFWNSDPAPNYYEQPWY LGGMQTAPGQCAWAAAYKDDASAEPRTNCAMAIRRDGQPWGVATIDVTLG FFNDLVARQEQALKAEMLIVEADGKIISNSSRINGPIVLKNIRDLSPGSP FAAQVQAALQQRDQGARRVEFDNAGVPSTFFMRAIEGTPWFLASALPTQL ITAQRDDVLSTLSLLQIPMVILLVLLQVYAIRQLVQRMKILKGNIDALAT GDADLTRRIVIRAEDELGAIGHSVNRFIQYLQQMIGEVIQATEAMAGSLG QLQQSSAHSQQILLRHASETDQTVTAITEMSSTADSVAANAAQTADFTRR ANEHAERSRVVVGEASGSVIALIDEVADATHKVEAMQADAQRITEVLGVI GAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTSQIN EMLARLTQGVSSSVSAMENTQASCQSAADATARVNSGLDEMADSVSQINS LSTQIATAAEQQSAVTEEINRSMVSIRHMVEELVDSARAGESNTQSLLQA NAQVSHLMSRFKVR >PFL_3248 response regulator/sensor histidine kinase MLSNIQAKLLIVDDLPENLLALEALIKREDRTVYKALSADEALSLLLQHE FAMAILDVQMPGMNGFELAELMRGTEKTKNIPIVFVSAAGRELNYAFKGY ESGAVDFLHKPLDIHAVKSKVNVFVDLYRQSKAMKQQVEALEQSRREQEA LLQKLQATQNELEQAVRMRDDFMSIVAHEVRTPLNGLILETQLRKMHLAR ENAAAFSLDKMHAMVDRDERQIKSLIRLIEDMLDISRIRTGKLSIRPSRF DLAQLVRGLVENFAPQVEAAQSSLSLQAEQPLEGNWDEFRIEQVVSNLLT NALRYGAKSPIEVRVYAQDGEARVEVRDHGIGISEDNQKRIFQQFERVSA NHVAAGLGLGLFISEQIVTAHGGAISVESRIGEGALFRVSLPL >PFL_3823 DNA-binding response regulator, LuxR family MTAVIRLVLADDHEVTRTGFIALLAGNPEFEVVGQARDGEQALALCEQLR PDLAILDIRMPLLNGLGAARLLQQRQPEVKVVIFTMDDSPDHLEAAMAAG AVGYLLKDASREEVLDALQRVARGEEALNSAVSARLLRRMSERGNGQAPQ AQALTARERQVLGLVAGGFSNREIGEKLGITTGTAKAHVERVIGKLGAAD RTQAAVRGMALGLVAQPAGQWP >PFL_3061 amino acid ABC transporter, periplasmic amino acid-binding protein MTKHWLAVPLLAIACVSMGASAKEWKELRFGVNPSYPPFESTTAGGGVQG FGVDLGNAICAELKLKCVWVSNDFDGLIPALKAGKFDAIESSMTVTDARR KQIDFSDRLYAGPTAIVTRKGSGLEPTGESLKGKTLGYMQGTVQETYARA KLGPAGVKLRAYQNQDQVYADLVYGRLDASIQDKLQAQMSFLASPQGADF ENSVGISDPLVPSEIAIGLRKDQDELKAMLNGAIQALHEKGIYAQIQRKY FGDLDLYNN >PFL_0855 methyl-accepting chemotaxis transducer MNRLSFGMKFSLISVLFFLPMLVTNFYLVRDSYREFQGTRVELQSLDLLG SSLALRRDLETLNNLVQINASLGQSGKAGDLEGKIVALEKSVLERLQALQ AVTTDPQQVEVFNAKRDELIAAFKTQQVESSLLNKSGLIGKLLGSAQLFS QIIASQSGLSRDGQGDIRQLSELITSVTPQVTQLLGEGRAMGAYSLGQGF LNSSSSTRFDELLVQIEKLQAEYGLKLQDALGSSRAAHDALDTLATTSKG SLKQASELFEEQVVMADTLDAPWQAFYDQVSGLMAQTYQLNEGTLKFLDV ELQKRLEQNRRHMVLLVAALALVFLSIVYLYGGFYASTRTTLRRLGAMMD KVAAGDMTVSFTAHSRDELGELGSVFNGTVLKIHDLIERVGHTVSEVERQ AGQVQSVSAQSNQAVAGQRTQIEQVATAMNQMSATSQEVARSAAAAVSSA HSVNDETISGRGLVESQQGSIARLASEIDQSVLVINQLASDSQSISRVLE VIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAKRTQQSTEE IEDMIGKLHGGVSAAVKAMGSSHAMANGTVDQSEKVQQALENILGAVGMI VDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGERTAEGAHQTEDASRQLS AQVVQLKQLIGAFRV >PFL_0687 sensory box histidine kinase MGLQLVLDQQGRILSSHGPLRHSLIQLPPSREPPHLLAYVLPGSVLALEG GPADWSGQVLDLDLRGAGGQPLHLRGWVQRCGQEWHLQLLDIGDLVQQRQ QALGREQCRVFAAQASEQLRLCNLTRLPDVLHDQLTDLARYWHIPCLGLA LLDEQEQGWVIHSCYSAHDAPRLWQEGQALGAGLDSLSGNTPQHLNQIQG LNEHPRLQGIFGHREGFLVPYRDDHGVAAWLLCGCYAVQQHAPYLLDRDW LMLAAALAGPLLSRLREHRHHLHLERLEALQGLLGAGWWELCPDTAEILL ASRLAASLHLPEDGARLNVQAWLELIHPADRGELSSRLQELKLGKPLLLN VRLHEPDPSAPQRWYRLQGQALGRGESQRLVGFMLDISDIKNQQQQAAAA HARLDNLIASSPAVIYVQRYQEGALQPSFFSASLQPLLGWSLADCTAQPL AEWVHPDDRDLYFQRCRQLLREGSVHTRYRLRDRHGVYHWVLDEAKLLRD DLGLPVEAVGLWLDVTEATLAAEQVRQSEERYRILVEDSPAMICRYRPDL TLTFGNRPLAAYLECAPEELPGSNLGQWLSAEQREGFERRLKLLSPEYPV STAEINLQLPGREHAWWVWSDRGVFDEQGQLLEIQAVGRDNTEVRRAQQQ LTQSAKMATLGEMATGLAHEINQPLNVMRMAIVNVLKRLGNGDVQIDYLT DKLKRIDAQVQRAARVVDHMRVFGRRSEVEQQPFNPAHAIEGTLSLLAEG MRGKGLELRISELGFEVQVLGFVDQLEQVLINLLVNARDALLGKQEKQHD FKPWIAVYGQRDEQWVRLWVEDNGGGIDPRLLERIFEPFFTTKPVGIGTG LGLSVSYGIVQNMGGRLSVSNSQDGARFCIELPIAEADQITR >PFL_6078 ppkA-related protein MASVYLATQRSLERKVALKVMAAALAADPSFCERFLREGKTLARLSHPHT VTIHDIGNVGELYYMAMEYLPNGTLKERIAAGLTPEQGLTYIRQIASALG YAHAQGLVHRDVKPANILFRADGTAVLSDFGIAKSLDDRTQFTQAGFAVG TPSYMSPEQARGQDIDGRADLYALGVVLYEILVGELPYNGTDALSTALAH LTEPLPELPLHHGRYQHILRKLLAKDPAERYPDAAALLAALDNLPAATAE VEATLIQPLPLPPQAASQPVPQGNDLAGLTPVSIEIPQQAPRPAPRREPP EEPPAPPRTANLPPAGSGPSEQRRGPVLALAGVAVAVALAVAGAGYWWLS GDSPAPEPKTASTAGTTPAVVAPPASQPVAADVDGGQRPLLMPGKKTLFQ RVLSKPGASFSSEPGAAPGQAVPAFSVLYVYQRKNLDGRSWLRLGAASDG RSAGWLPAEQVSDWKQSLVLKFTERSGRAPVMFVRQASELERLLADPAAA KNLLLKAQKNPQDEQQVLALEPNASAVPQDQFYLLPIFDSKESFDDNGQP VQLLNVASIDPGNSPQSISDSSGKRLPANAPPAAGDAFRTAVVLVVDTSV SMQPYIDQVRDVVHELQSKIAQRGELDSVSFGLVGFRNNTSKTPGLEYVT KTLVTLDQGRDPQRFQELVSQVKATSVSSHSFNEDAFAGVMQAVEGMDWK GYGGRLILLVSDAGALRKNDPYSRTQMNEAEVRQAALGKQIKIYALHLRT DAGKKNHAQAETQYRVLTADANPKIGDLYIPVPGGDVGKFGERVDEIGTV FADLVHQVRSNQSQEVPVLAAAPSIAQKSAAIGYAMHMDFLGRKSASQAP QLVSAWTADRDLTNPALPAFQVCVMLTKLQLNDLQQSLKLIVDAARKTQT SPKDFFQEIASASAYMSRDPSALRKGGNLADGGVLGEYLEGLPYRSKSLS MTQDLWLSLSVAEQEDFIDELDSKIRLYETFHNDLANWVRFGDAEPGDAL YRVPLSTLP >PFL_4234 EAL domain protein MIDGQPLACFQPFIDTATGRIAGVEALGRLRQDNGQLASVGPLFADPRTP SSALRRLDRLIRDDALRRLHEAPADWFLSLNISPRWISRLRPGQPLPSLK QLQQNRVDPRRIVFEITELGGNSQRLSEVVERYRQAGARIAIDDFGAGYS QLDRVLALQPDILKLDMRLFQAAARGGPSSDVVKALAQMAEKTGCWIIAE GVETEAELDFALECGSRYVQGFLFAQAEQQFYPSDAFVQPFARLRERYVR HKLAERNRLMRMRLQLAELMNLLQAWAQAQAPISQLPRVEAFPWLLRFYQ CDRHGTQLTPNLEWRHNSWQADSSYVGHNWSWRPYFYHLLAEGWEERRLT LSNTYRDATSNQYCLTAGQFFDNGQRLLLIDIDAAGL >PFL_4449 sensor histidine kinase MNWSDLPGRHSLFWKLACLLVAFCLLMIWLSWSWGRYVEQKNLYLSDEAR ATLGSYAREAEQAWKGGQSAGVDAWIQQIASREKTWIGVIGSDLQSLSSY PLTPAEAQRLTFLRGADWPVSRHARGLPWLKVPFPEDPSLGSLVIELPQR FMPGRYRVFWQVITNGVIPGLFTLLLCVGLYRLLVVPLNQLREQANAWRA EQLNVRLSSETTQRRDELGELGRAFDQMSERLQSTVAVQQQLLRDLSHEL RTPLSRLRVACDGERDLAALRERLAREVDGMQRLVEDSLQLAWLDTERAP LPQEQIQVQALWEMLSENACFESGWSAQQLRCELEADCWVRGHLNTLAQA LENILRNAIRHSPAGARVSLGGQRDGKYWHLWLDDEGPGVAEEDLERIFA PFTRLDGSRPGDGGFGLGLSIARNAVGRQGGQLWAQNLAQGLRIHVRLLA A >PFL_3308 diguanylate cyclase, putative MLYPSKPNNEALRIQTLRELNVLDTSPEERFDRLTRLAKRLFNVPIALVS LVDADRQWFKSCVGLDVSETSRDISFCGHAILGDQILTVPDAGLDERFHD NPLVVGAPGIRFYAGCPLTVTNGSKLGTLCLIDIKPRDLDDEDRALLRDL ARMAEQELAAVQMASMDELTLLSNRRGFEALARHALGVCKRLEKPATLLF FDLNDFKQINDTYGHAEGDGALKTFADVLRIAFRESDVIGRLGGDEFVAL LTAADHVETSAIMARLREILDERNATLKRGYDIRFSVGQIEYDAERHPDI EALLADADKAMYLHKQASKRAR >PFL_2536 HDIG domain protein MGMYIHQFCGSWLDHSFWKAGFVLNSHADLQRLRQSNVSSLWIDSDKGLD LPANPQPSAPAALPPLKSEAPLRVERAEEIQRALKICAHSKKAVMQMFQE VRMGQAIELVQVDELVHNISSSLLRHPDVLISLARLKTADDYTYMHSVAV CALMVAVARQLELPVEQVHQAGVAGLLHDIGKLTIPDSILNKPEKLSADE FERIKLHPAAGGAILRQNPQLDALVLDVCLHHHEKIDGSGYPHHLAGEQI SLFAQMGAVCDVYDAVTSTRPYNRGWDPAEALQRMSGWTGHFGPRVLQAL VKCVGIYPVGSLVRLNSGKLAVVLEQNNESLLLPKVKVFFSTRSKMPLPQ RVLDLSRLQGEEHIVAREAQEAWDFKQLQQLWSEVPA >PFL_5389 methyl-accepting chemotaxis transducer MTLGNLSIAQRAVISFGVIALLVLLQGLFALKQVAEVRATGQHTENISLP STRYLGEVRDYVLSIRVLSLRMALNREPQVLESTIARLHQVQAWLDQALA RFAPLVGDHNRVPYEAFLATVKSYQQALAQYEALSRDNRSSEMTALLNGK IQDYSTQTGDQFAELMNLTAEEVSQSAQHADALYTQVKITVIGALIAVAL LTLCLAWLLIRSIVVPIRQAVSVAEQVAAGDLGRPIHSEGSDETARLLKA LARMQASLRETLQLISSTSTQLAAAAQQMSQSTYQDSSRLQQQHNEIEQA ATAVNEMTAAVEEVARNAVSTSDTTRQSTAQATQGQTRVTQTLDAIQAMS SDVGIALQQVQTLAEQSREIGKVLDVIRAIAEQTNLLALNAAIEAARAGE AGRGFAVVADEVRALAHRTQQSTQEIEQMIGRVQGDTDSVVQSMHGNSQR VAQTLSIAEQAGLALGEITRAMEQIHERNLVIASASEEQAQVAREVDRNL LNIRDLSLESADAATRTNATSQELSHLAAGLQNLVVRFRF >PFL_0778 methyl-accepting chemotaxis transducer MSSWFANISVNLKLGLGFGLVLALTTVLALTGWTSLGSLIDRSNWMSDIT QLNSGLTKLRVTRLQYMLANGDETAAQGVQNTLDDFSAQQKKLLASFQSP ENIKLLQGLGATISAYQDSLNKMRNAYRSGDAARLAMNQNAERANDLING INSWVKQLPLSDERFTQFQAITQAKEAFQLARYEVRGYVTTNNPDTEQKA VTQLNAAIAEMDQLKSHFSSTQRDALQQLETALSGYRSSLQAFKVAFTNA VEARKEMTDQGADIVSRSDALYQIQLDRRDIESAQARSLQLISTLLALLV GVLAAVIITRQITRPLQETLAVVERIASGDLTENLRVTRRDELGVLQQGI VRMGVTLRELISGIRDGVTQIASAAEELSAVTEETSAGVNSQKVETDQVA TAMHEMTATVQEVARNAEEASQAAAAADGEARQGDKVVAQAIEQIERLAS EVVRSTDAMTVLQQESDKIGSVMDVIKAVAEQTNLLALNAAIEAARAGEA GRGFAVVADEVRALAQRTQKSTEEIEELVAGLQNGTQQVATVMNNSRSLT DSSVELTRKAGASLESITRTVSNIQSMNQQIAAAAEQQSAVAEEISRSII NVRDVSEQTAAASDETAAASVELARLGGQLQMMVSHFRV >PFL_5806 amino acid ABC transporter, periplasmic amino acid-binding protein MHKITLLGCTLGLLFSAMSQANEAPLQGTLAKIANSASITLGYRDASVPF SYVGDNSGKPMGYSVELASKVVERIQQQLHLPNLKVKYNLVTSQTRIPLV QNGTVDLECGSTGVTAERQKQVAFSYGFIYVKGQLLTAKDSGIKSFADLR GKNVVTTAGTTNERFLKSYNVEHKIDMFVISAKDHGEAFQMLQSGRAAAF YMDDALLYGERAKARDPHNWVVVGEEQSREIYSCMVRKDDPQFLALVNGA LADLYRSGEINGIYQRWFQQPIPPKGLNLEFPMTSELKAIIAQPTSDPVQ >PFL_1668 chemotaxis protein chey MKILIVDDFSTMRRIIKNLLRDLGFTNTVEADDGTTAIPVLNSGSIDFLV TDWNMPGMTGIDLLRHVRADEKLKHLPVLMVTAEAKREQIIEAAQAGVNG YVVKPFTAQALKEKIEKIFERIG >PFL_4269 universal stress protein family protein MIRSMLYATDLGLYAPFVMQHALELARTFNADLHVVHAVEPMGLFAESVL QSYLDEQSLNEFHRQGLNTVMANIEQRVLDSFREELGEGMQDLTLIQSVR VLQGDPSQVILEQAGKLSVDLLIVGSHSHGVGAQTPLGRTATRVLQLAKV PVYLVPLVQRRRQGDT >PFL_4320 GGDEF domain protein MKTPTQTNAIDFDSAKLQRLGFGQQSPLIKQPISLAQLRQQLGLQLQTSL EPQRILGLFFREVQRLVPLDALQYQHTPSDLRLEFGQRGHHSISYSLSHE GEPMGELVFRRNQRFSESEQGSLESLLSTLLYPMRNALLYRAATRSALRD PLTDTGNRIAMDQTLQREIEMARRHLLPLSLLMLDIDHFKRINDNHGHSA GDQVLKAVAAAIKGQLRNVDMVFRFGGEEFLILLSNTGREAAAMVGERLR HAAQAQDYRADGQPIELTVSLGCSTLLPGESAESLLRRADSALYVAKREG RNRLAMAG >PFL_5701 response regulator MLEPDLPPQRVLIADDDKDARELLAEILGLDGIRCITAASGKAALELLES NKSIGLLITDLRMAPCNGLDLIRQVRESERAALPIIIISGDADVRDAIAA MHLSVVDFLLKPIDTTKLLALVKHELGMVL >PFL_2013 tail tape meausure protein MASKLALGLVIGGAVSSTVGAAFKTVEGRIKKLEEQGNKAKVLKNTIGET MRLRDEWRRAHETGAASAAGLLRKLEGNLTSLQKQGIQVNKLRQEYQALG RVARGADLQLKGHQQIQQGKEGLKSSIGQAVAGVGAVAIPTKISADYQAI IRDIAIKADVANKPQEAQLTRTIIQTSQDTGMGRNDVAELVNQLVGAGME LDKALSYAPVAAKFAVGQGSGGEDTAKMIQALEQNAKISDPKVMEKALEA IAMQGQAGSFEASDMARWFPQLLAGMGKMEITGMDAVSQLGSMLQVQMKT AGGSDEAANNLKNWMEKIGSGEVVKAYKDAGIDYQASLSTGVQKGMSTLE SSFELAMRYIKATDPAKAAKMAEAQAKISKEADPAKAKAMLNALEQSLRT GNLFSDMQVKAALTAYSQNRELYEQLKKDSLSAKGILDKNLAERRETSSQ LWAETAHAMNDGMRAVGDALRPATDAVAKHITTVARSLTGLAEKAPPLVM GITALGAGLVALKSVVSAFKIGKGLLNVARGSLMGNPNVIQRVFVTNAGG LGGGDYDVDGGKDKKGGKGGRGSRAGRAGRGRLGSVGRALRNVFSRGGVG TVAKGAVGLGSAALKGTGSLLKGLAPVVKGGAFLSVLGAGLKAADIYQNA KTKDEKAEGYGGAAGGLAGALVGTKMGLAAGAAIGSVVPGLGTAIGGAIG AAIGGTVGYLGGDALGSFAGKSMFGSDESLKRMPAAGPLMLANAGKDIPP VLGDIAKSFKTGQTPPVMGQVVRSMGAATPASVVPSMLKAPDPAKSVAPK VDQQFTFAPTVPITVQGDVKDPAQVAREVEPHLRRMFDEFSRQAAARQLS DEPHV >PFL_5947 methyl-accepting chemotaxis protein MNIRQNMLATGVVSLLAIALVAGLGLWGQSRLARALVDNELNASALRNHL EADMMHDALRADVLEALSSQPGDAAAGEEVRNSLREHGDWFRKALAENAK LPLAPEIRNAITELQPVLENYIHAAENIAGQALKDPQAARLQMPEFSQRF SEVESRNAALSSQIEASTAQTRELSESAVRQAAWWLIGGSLLAALALALL TRQLLTRVLKPLEKSVATARAIAQGNLTTPISVDRHDEAGQLQQALGEMQ DNLRQMITTIRHESEELRGRSHSLSDTSLSIADGASEQADGATNMAAAME QMISNIAQVAEHARNAQGIAAQSESLAGSGGQVILGVVDGMSHIAEAVNQ SSRSITALGQSSEEIHSIIQVINGIAEQTNLLALNAAIEAARAGEAGRGF AVVADEVRNLAARTAQSTREITGMIERIRETTEQAVNSMQTGVSRVNDGV QMAQQAGTSINEIRQGAQRSAVMVEEISLTIGEQSKASSEVAQRVEMISL VARRNSQAMRELTQTVEQMENSVATLQTSVTRFQL >PFL_4544 methyl-accepting chemotaxis transducer MRRPITLLRCTHSTPLECALQGCSALRMPSSGLLYPCHEISSMFLQKSLR AQILALLSGSLLAMLLIALASFHLLSGGVQSYRELIEGPLRSSQLIDEAN LQFKSQVQEWKNVLLRGKQPQELNKYWQQFEDRQRDVQNILGQLVQTPGL DASLKSRVQRLADEHRQLGSAYQKGRDAYVAGGADPSAGDAAVKGVDRAT SEQMSELVTELRQHGDRQSAEISAAADRTVWLGILVMLASGLLIGLLSLW LVNRSLVQPIRQLIDYVAQLSRGQLAQRVASERQDELGKLAMAANTLRDF LAQTFASLQRSASDLDSSSGELNSIATLMSQGTNEQFNRTDQVATAMNEM SATAQEVARHAADAARAADDADQSAQQGEQVMQQTIHSITQMRGEIANTA TVIRRLEADSGRIGKVLEVIQGIAEQTNLLALNAAIEAARAGEAGRGFAV VADEVRSLAQRTAASITEINQIIQSVQTGAVDAAQAIESGQSRSEQSVQQ VTEAGAMLERITEAVEAIRDMNRQIATAAEEQTSVAEDISRNLTEITSIA STNLDNVQRTEAASRNLHGLSGQLSEVTARLSA >PFL_5426 sensor histidine kinase/response regulator MHYLLMLLLSLPMLAGAAEFDEFTQRLPLGRVMQVLEDAGGEATIADVSS GPLAEQFRPHDKDTLNAGYSRSAFWLKIDLDYRPANPSAQRSWLLELAYP PLDHLELYVPDESGGYRLAGRTGDALPFDSREIRQNNYLFNLNFSPHEHK TVYLRLASEGSIQAPVSLWSSSAYLEAQPVRLYVLGLIYGVLLGMLVYNL FIYLSVRDTSYLYYIVYIASFGLYQLSVNGAAVEYFWPDSPWWANAATPF FIGSAGLFGSQFARSFLQTSRHSPWVDRVLLALMAFGALVMALSLMTSYA LALRLATTLALVFTVVIYVAGIVAWCRGLRVARYFIIAWSAFLFGGVINT LMVLGYLPNVFLTMYASQIGSAIEVALLSLALADRINAMREQQAQTLLEA GQKLEVLNQQLAHSNRLKDEFLATLTHELRTPMNGVIGSLELMQTLELDP ELEQYQQTAAGSARDMMRMVNGILTLTELQAGKLSAQRQPFSLRSLLTTL QTQYGASAAAKSLAFQIDLSAGLPDRLQGDRCKLSHCLECLLDNAIKFTP SGSVVLRVLTRSVSAQRVSLSFEVIDSGIGFVNLDEATLYQRFFQLDGSM TREYGGLGIGLAICRQLVELLGGQLTHESTPGRGSCFRLLVEFDAQEPAP RSPVAVARRLPRDCTVLLVDDNDVNQLVVRGMLLKLGYQVRTAGSPTDAL QLLGRELVSAVLIDGEMSTAQLGAFRLQAQALPGYSQLPILLACVPGKEG CPAGAGSDYLAKPVKFEALQTALSRYVLSVEQGESADI >PFL_5433 PhoH family protein MNAPIEPHRFILEPFEARRFANLCGQFDEHLRLIEQRLTIEIRNRGNQFE LIGEPKQTTSAENLLRRLYRETKGTELSPDLVHLFLQESAVQELDNPSVA DAAVALRTKKGMIRPRGLNQQRYVKEILGNDINFGIGPAGTGKTYLAVAC AVDALEREQVRRILLVRPAVEAGEKLGFLPGDLAQKIDPYLRPLYDALYE MLGFEHVAKLIERQVIEIAPLAYMRGRTLNNSFIILDESQNTTVEQMKMF LTRIGFGSTAVITGDITQVDLPKGTKSGLAHVINVLKDVPGISFTHFMPK DVVRHPLVQRIVEAYERFELHAADEAAKAAADRGNRHDA >PFL_5635 sensory box-containing sigma-54 dependent transcriptional regulator MLTVESRVNFNDASFEELLNALHDGVYITDGQGQTLKVNQAYERLTGLNG AELLGRPMQELVKSGVISQSASLRVLQDGRPVSVMQSLSHGKKLLVSATP ILAADQSIRYVVSTVRDMTELLRIKRERDELQQLKQLRTSTARLHAGQRD DLLQSPLMADQEVSGRVFAQARQVADCDVKVLLQGETGVGKTLVAQFIHN ASARAREPFLALNCGALPENLIEAELFGYAPGAFTGAGSKGKRGLLELAH NGTLFLDEIGDLPLAVQVKLLKVIEENRFIPVGGLELKEVDVRIISATHH DLKQRVAEGKFRADLYYRLNVVPIAIPALRERSEEIGPLLEYYLEHFNQR YQRQVQWSLEALELLGEYAWPGNIRELINVVERLVVTCSGQVIEALDLPE DLIEQQARNTDDSRLPLRKVLENAERQAIRAALQLHKTTRLAAKALGVSQ ATVVQKMKRWEHSD >PFL_4800 GGDEF domain protein MTHKAIQSLLFKRFAIAAGTYALILLLFWLAVVTGHSRASSGSALLGTGL VLASQGLLCWVFVSGRNLQFADPSLTEVQVVLGIAWQTWLMAHLDQARGV FLVFYLLPLLFGLFHLSRRAYLRSAALIFFCFAAVNLWDGYRLLLGDPQL AALQVCVLLVMLVWMCLYAAYVQASRSRMRQRRFALQAHQDTLRGMMRQL EDLVATDELTGLFNRRHFLRIASRELQAMDQEQVHGLALIDLDHFKRIND LHGHAAGDQVLQAFAAVATACLRDGDVLARYGGEEFVVLLPECDAERLTS CCERLRLAFTEVQLVGLNVRDLSLSAGMTLLRAGDDLDHALQRADQALYR AKRDGRNRCSAAWENLDA >PFL_1645 Hpt domain protein MAEIHLDHTVLNALQEVMEDEYPVLLDTFVCDSEERVRLLHKSEDTILLV ATAHSLKGSSSNMGATRLAELCHQLELRAGQSAADGIRQLVGEIDGEFAI VRRLCEQELQRFHC >PFL_3390 rtn protein MPLTAKGPLKRSTRTFWTLLAMLLPIGLGALILYAQAERTLMHSSLETAE EAIRQFDLMLDNTDIAARALLPQVGRDCDEVRQLALREQVTRRPFVRSTN LVWRNNNYCSSLLGSFAVPLNPLDYVDGRLWLMSGNPVTPDTALLVYRWS EGDRAALATIDGYHLTNALRLISRFADLQLQVGGHWLSSDGRVHEGSPPL AAVASQQLSSSRYPYSVSSGFPEGDVWNYMKSQYPALFSLLVFFSAAAGV LAHWLQKRSASPTHELQRALGAQEFIPYFQPVVRGDTLAWAGIEVLMRWQ HPKEGLVRPDLFIPFAEHSGLIVPMTRSLMQQTQQALAPHAAHFTDGFHI GINITASHCHDLQLLEDCREFLAGFPPGKVILVLELTERELIEPTATTHQ LFAALHELGVMIAIDDFGTGHSSLGYLRQFNVDYLKIDQSFVAMIGADAL SLHILDSIIELSAKLDLGIVAEGIETAEQRDYLAAKGVDFLQGYLFGRPM PSAEFVAALARH >PFL_4240 chemotaxis sensory transducer family protein MLSTPALAQRRFPLHIHISAMFTLLLLLTGVVLGLYNYQQTTRLILDSSE KLFQRIELDVRSDVKATYDPMRHLLSLLAGSPAAQAANLEDRLTLLRPFS QALLDNPDLASLYLGYANGDFFMVRPLRNPQIRERRQAPQNSAYEVWSIE RDSRTGQVHSQSLFYDPALVLIDRLEHPDERYDPRNRDWFSSARGDADQI TTRPYVFFSTQNVGTTLARHSGKMAVIAADLTLEQLSSTLAKHRVTPSTE VALLDDQGNVVAYPDSQKLLPEQRSARLVKANDLSPALAALMRGQTEGGH LQAQGRSWIVASGHIAEGGPGGLQLALLVPEDELLADAYRLRWQGALITL TTLLLCLPLGWLISRVLVRPLHALVQEADAIRSFDFDYPVSRRSPVLEVD QLSISMARMKDTLASFFEINASLSAETRFDPLLQRVLFETVKIAQAQAGL IYLCESKGTRLEPHGLIIDGQPQDMTQFPIGSRELADSRTPEWLSQLTHN DSVVTTLGFDQAADLQSVLLVLDSPSAHLVGIRLRNRHNETIGMLLLFLV DSGAEADLDKLSPDRIAFIQAVSATAALCIESQRLQNKQKQLLDAFIQLL AGAIDAKSPYTGGHCQRVPALTLMLAEAAAASQDPRFAAYQPGEDEWEAL HIAAWLHDCGKVTTPEYVVDKATKLETLNNRIHEIRTRFEVLKRDAWIDY WRALALGGDEQPLAAEREAQLLALDDDFAFVARCNMGTEFMAEADQQRLQ RIAQRTWSRTLDDRLGVSWEENQRQERTPAPSLPVLEPLLADKPEHLLER SATEVMAADNPWGFKLQVPSHKYNRGELYNLSIARGTLTAEERYVINHHI VQTIIMLEHLPFPSHLQNVAEIAGGHHEKMDGTGYPKQLKREQMSLPARM MAIADIFEALTAADRPYKRGKTLSEALNIMAMMCRDAHIDPELFELFIQQ RIYQRYAERFLTPQQVDPVDQDSLLKKAGLST >PFL_5641 sensory box histidine kinase MRFRCLLLIGCLCLPLIGRAAPAPQVPTAPLSLEQRQWLAQHPELRVGLV LQAPFAQYDRRLQRLSGANVELMQALAKALNIELSWRNFPDQAQLERALR DGEVDMAPGLTQTPAGLRLWLFSDPYMRVPQLVVGERKGAGAVELEKLDS QARVAVRMPSAVADYLRLTYPNLNLQGVPLERQALQLLLSQQARYAVVDE AQLSRLSGEAEFAGLAVVGDIGLPQLLRVATRRDWPELASIVEAALHAIP AKELEQLHGRWLQPKYPRLGESPGVWQNLSLLLVILLLASLAIVFWQRRQ QRSLEQRLLAAREDIALRAASEEALRLTQFSIDQSTVGILWVNWDSHVRY ANRAAEEMLGYPAGGVIDRPLIDFEPNLHMDRWLNLWKRARASEEGVQSF ETQCVRADGSILPADVSLSFLRFRDSEYLVVYLNDVTERRRALAALRESE ARLQGIAANVPGLVFRLERAPVTGQIDFAYISEGSETLVGYSPAVLAHRD KGLRSLVHPDDKASYHQTQDQALDTDSDWSWQGRILTRQGQQRWAEIKAI TRRLDDGAFVWDGIVWDISESKRIELELASSREQLRELSAHLESVREEEK ARIAREVHDELGQMLTVLKLETSMCELAYAQLDPGLHERLNSMKRLIAQL FQLVRDVATALRPPILDAGIASAIEWQARRFEARTQIPCLVQVPDNLPRL SDAKAVGLFRILQEALTNVMRHAQAHTVELTLTLEAHELCMSISDDGLGF DTASARPTSFGLVGMRERVLIMGGSLSLHSERGEGTTLSVRVPLDQEQ >PFL_4630 methyl-accepting chemotaxis transducer MLSIRPFARSPPMFDSLSIRLKIVLLSGLCLLGVVALIVGMNLYQSQQNN QLVNTSSTRMLTAGVEELLQAKAADQAVRVQKTFGESNLVITALADQVRD LRDMASKRGLEAAALREELNHSLKTAFERNPKVLGIWLAYEPNALDGKDS EFLNDAARASNERGRFATYWSRSGGQQLNTVMVEDDLTKTTLNLSGTPYN VWYTCPRDSRRTCLLDPYADTIGEDKKQVLMTTISQPLLVDGKVIGVIGV DIALDSLQAAAGESQRFLFNGAGHMMIVAGSGLLAAVGADASQVGKNINE TLGAQGKDILALLAGNQNKVLQQGELIRAVYPFSPIADAKPWGVTIDLPQ QVLLADSVKLQGLLDEAQTSGTVKTVLVAVGAGLLGLLLIWLSASGVTRP INSVAQMLKAIASGDGDLTQRLDYSKKDELGELVGWFNRFLDKLQPTIAQ IKQSITEARGTADQSSEIARQTSEGMQVQFREIDQVATASNEMSATAHDV ANSASNAAQAARGADQSAKEGMTIIERSTRDISLLADEVSKAVGEVEALA VSSEQIGSVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRN LAKRTQDSVEEIRVVIERIQSGTRDVVTTMHASQSQAQNNAGQIQQAVQA LGKISDAVTVISDMNLQIASAAEQQSAVAEEVNRNVSAIRTVTETLTEQA SESAQVSSQLNALATQQMKLMDQFRV >PFL_4887 sensor histidine kinase MLAFWLVSVIPTMIAAELAATTLSEIFDSNVRIWLQESTKIVEDEITEIL HDNARIAQLFLRYTRPPTDRNAAKHDKLTADIADSMGIDVVALIRKNDHK VVFTTAADDVVGQISTASNAVLQTIQVGGVATGAVVSTFQTQLDGVDYQL LIATYLDASFLTSVADVHSLDLRLYLAKADDFSEIFATQRFEDHPPQVPH KIEDILRATRQPTEQFTSRYSGLYRPIFNDSGDLVGVIFSGLLRHSSLVG LVNQSNLFILIFLLSSAASLCVGWLVSQRLTRPLRGLSKGVQAVIAGDYR QRVPVIGGDELAELSSTFNHMTERLGELQHLEAQLRRRDRLHALGEVAMG LAHEIRNPLGIIKTATQLLHRRANLPENDKRHLEYVISEVSRINDLITEF LDFAKPSAPIRATQLARPLVEELLGFCTPELATHNIDARIDDQAPGATLH ADARQLKQACLNLILNAIDAMPDGGRLTLGISQRDDETIISVSDTGQGIE PDMLERIFTPFVTTKASGTGLGLAKVFSIMESHDGHIECTSEKDAGATFS LYIPANGEEDDEDSDDA >PFL_0187 response regulator MTAVDLPAVPRVLIAEADPWSRDLLKQVLLNVRCDARLDLCADGQEAMDL LSAKPYDLIIADWELPGIDGLSLLRAVRQRKRNPVQPFILLSVRSDSASV REALPLAPTAYLTKPLNMEGLTQRLQGLLLDAGQEVSCEVPALAPGMTLW PFLERRRDVADGAPLLTDVQLAVKRSLNPEGLDLKVLEEEIRTDPQVTAV LIAAANSAAQHHGDGVQTLSQALHRLGTGQSMNLILGLTLKRSARLSDPA LADYAERYWELSLHTAEYGRTLARLLDLDQERCYCAGLLHRLGDLALLRC LQEWKQAGGELDDQEEIGDALERFGAAYGSALRTRWRMPLELRELIASIY QLGGGVYSREALVMNLAAQLARLTEHEGVEEIARCKTARLLKVGLPELTR LRKG >PFL_2035 GGDEF domain protein MPVPIYDPHHPPGGTLKRLPLLKAAVAFIATVFLCLCGLLYLQLEQSWRH DLMQAEVNSTNLTRAIAQQAEDTFMEADLVLMSLSEWIQALGDGPEQQPR LQGIFARRVQALTQLSGVFLYDRDGQWVVSSFGDSPHGNDVADRDYFRFH QQNASLLAHISPAIRSRANGEWIIPISRRLNDSQGNFQGVLMAGIKLAYF DQFFTSFNIDEQGAMFLALSDGTLIARRPFEERQIGASLARGEIFSKYLP EATTGNAMITSIVDGVTRLYGYRQLQAYPLVVAAANSKDSVLKGWYASAY QSTAIVALVLLGVGLFGWVFVQQVRNNERIEADLREAQEALEVIATHDSL TGLANRRLFERALTVEFGRGARQRSPLSLVMVDIDYFKRYNDTYGHVAGD HCLTEVAQALKGCCQRKADLAVRYGGEEFAVLLPDTDIHGALAMAEQIRR SVMQRNIAHSGSPVGCVTVSLGCYAFVPTGRDSIEMFIERADAALYQAKA TGRNRAMALAADHVGEPLQRSDR >PFL_5705 sigma factor regulatory protein, FecR/PupR family MTPMSSKPVSAQVLDAAIAWQLSLDGGASAVEREEFAKWHAAHEEHARAW RQLGMLDQRFGVATGPARNALLQSREGLRRRVRKLGRGVASVVLFGGLAL FAGERYLPMDYWLADQRTATGEQRTLRLADGTVINLNTHSALDVRFDEKQ RRIVLQEGEILIETGHNDSRPFIVETRDGRMRALGTRFLVKREDQGTRLG VLQSAVAARPQAGQDEHVFKEGQQVLMRRDGLGPLQALNLEADAWTRGML VVDNARLGDLIDELGRYRRGHLGVAPELADLRITGSFPLQDTDLALNALL PTLPVKIERHTPWWVTVVAKADAKH >PFL_3053 CBS domain protein MPVPPPNVGTFKGFLVIQASPSFCLSFWIGKRLPMFARWKPAAINTRPLE WSRAAIGMALGTLFSVWLCAQVFGMPVALHLIGPLGASAVLLFAVSSGAL AQPWSILGGYLCAAVMALAVAHVLGRTLGSACLAAGMALVLMCWLRCLHP PAGALALTLVLADPASVALDWYELGPVMLAAASLLLSALAYNNLTRTRYP KGPSEAPALLPATAASDSLAITAQDLKLALAEMEEFFDVTPEDLEQLIHA SEAHARRRSIGQVLASRR >PFL_1757 methyl-accepting chemotaxis transducer MTSAASGRFANLGMAKKLGIGFALVLLLTALVAGIGVWSLQTISQRFDGL KQMSQLNSGVLKVRLQEQDYALHGDSKTVDSLHESLEGLQALAQQLKVRS AANQTAMGDVELALADYRKAFDEFVELTQAKDLALEMASWSVSSVANNLD VLQAGLADDGAYTLKESQGKDGAEFIEQANQISQVSRLMLQAMNEARLRL DQNRKGGDQEPAEQGKIEQADQALAQAEQLKATVKDAGYQTVLNEVSGHI GNFSEKLNEYTGLLAQEKQVYQQLHERAAQVMARVDQAYGAQEHSMLGEL DKNSLLIIGSSALALLVGLLAALSVTRLIVRPLRSVMHVAQQIAAGDLTA TVEVTRRDEIGQLMQAMQQMGSGLSGIVSGLQAGIEQLASSAQSLSTVTE QTNLEVSTQKEETEQVATAMNQMTATVHDVARNAEEAAQAAQAADDKVES GQQVVRQSMQRIEQLADSASRASSGIESLSAEIDNIGSVLDVIKSVAEQT NLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTQQSTEEIARLVTALH AAADSSVQQIQSSGELVKLAVSDALQTESALGSIAAAVSLIQQMNQQIAA AAEQQSSVAEEINRSVTSIRASADQSSLAMQGNAASSIELAQLGVELKGM VGHFRL >PFL_0708 RIO1/ZK632.3/MJ0444 family protein MKTPKRIEPLIEDGLVDEVLRPLMSGKEAAVYVVRCGNELRCAKVYKEAN KRSFRQAAEYQEGRKVRNSRQARAMAKGSKFGRKETEDAWQNAEVAALFR LANAGVRVPKPFDFLEGVLLMELVADEYGDAAPRLNDVVLEPDQAREYHA FLISQIVLMLCTGLVHGDLSEFNVLLTPDGPVIIDLPQAVDAAGNNHAFS MLERDVGNMASYFGRFAPELKGTRYAKEMWALYEAGTLHPGSVLTGEFDD PEELADVGSVIREIEAARLDEERRQAVRAADDAPPGKSEEPPPPPWMQ >PFL_1132 CheW domain protein MSHPYSLDVTREDAQAIDDCWNRIGIHGDKSCPLLVEHIHCRNCSVYSAA ATRLLDRYSLRQEDREHSVVLEADSDVVTRSLLMFRLGEEWLGLPTRCLL EVAPQQAIHSLPHQRSRALLGVANVRGALVACLSLTELLGLDPSPAAPAG GRVMPRMLIIGAAGGPVVVPVDEVHGIHAIDERILNGASASGEQANAKYT RGVLQWQGRSLRLLDEEQLLAAVTRSLT >PFL_3852 DNA-binding response regulator QseB, putative MRLLLVEDDRALGQGIRVALSAEGYTLDWLQDGASALHALRTESFDLLLL DLGLPRLDGLELLQQLRAAQQDLPVLILTARDGTAERIAGLDAGADDYLV KPFDVEEFKARVRALLRRSQGRAQPLLEHAGIRLDPANQQVQYQDNEVVL TPMEYQLLHQLMVRPGKVVTRERLSRALYGWQDRVESNTLEVLIHNLRKK LCSELIRTVRGVGYVLALKP >PFL_1432 GGDEF domain protein MPRRSPLYSQRSLVLVLIALLGSGFLATSLLSYYASRDSIRDSIVNTELP LTSDTVYSEIQKDLVRPVLISSMMARDTFMRDWVVAGERDPSQMTRYLNE VMTHYDAYTAFFVSNTSLTYYQAKGVLKKVKADEPRDAWYFRVRDMSTPY EINVDPDLANQDKLTFFINYKVYDYQDRFIGAAGVGLTVDAVIKLIDKYQ QRYQRSVYFVDAFGRIVLTGADGGPQGARSGQSLHELGSLKELLSQLPKP HSGSYEYNSQGQGHFLNVRFIPELNWYLFVDKREDGALNSIRQSLYLNLL ICLVITAIVLVLLSAVVRRYQRKIEAQATLDSLTRLPNRRGFDLLAAQAL QEAWRDLTPLCAVLLDLDHFKRLNDTYGHLAGDQVLSGFARDLQGCLRQS DIVCRWGGEEFIVLLKDTDSSVALGIAEKIRLLTEQQRYHYEGQPLQLTV SIGLTSLQAQDTLHSLLSRADHAMYRAKHTGRNRTCVEMPHSSHE >PFL_4243 sensor histidine kinase/response regulator MDIKFTNRLSYKQARLTVLVGFILGTALSLLQIGIDYASEDASINREIQS LLEISHNPASRIAYNIDAELAQELTLGLLRSPAIIRAQLIDNNNTLLANV ERPPQQSRYRAISDFLFGADRQFEDRLYLSHLPEESLGTLHLDVDTYAFG SRFLRRAEVTLINGFARSLILTGILLALFYVMLTKPLVRVIRELSSRDPR SPKQAKLDFPHGHENDEVGVLVKVANQQFDIMATEIQQRRNAENRLTEYL GQLENIVSARTTELKASNARLSQSNEELEIARRTALDMAQARAAFLANMS HEIRTPLNGLLGMIALSLDSPLNPEQRQQLSIAHDSGKVLVELLNDILDM SKFDAGQLELERIPFDLGVLVEDTANLLSQNAAASVELACLIAPDFPALV LGDPTRVRQIVSNLLSNALKFTRFGRVDVRLSTLGDGVRIEICDTGIGIA QEAQVRIFQPYTQAGAGITRQYGGTGLGLALTYNLCEAMDGRLSISSEVG FGSQFCADLPLPCHTPAAPPPALAGKIIAITEAGSGLAELLASLLPSWGL SYQRCDIEDSLAGLDPDLLITDCPECLFGLRPAIRAPILLVTAYGSFLPS EEANALAPLQQQARPLARNALYQTLRRSLLGETITLNDAQLEMPVQRRRA DILLVEDNPVNQLVAKGMLSKLGCAVTVAAHGAEALNQLELHRFDLVLMD CNMPVMDGYEASRQIRRSGRWPDLPIIALTANAMPEERERCRAAGMSDYL AKPFRREELIALLDLWVPTTTKL >PFL_1593 DNA-binding response regulator MSDLLLIDDDQELCELLSSWLSQEGFLVRACHDGLSARRALAETAPSAVV LDVMLPDGSGLELLKQLRNEHPDLPVLMLSARGEPLDRILGLELGADDYL AKPCDPRELTARLRAVLRRSHPVAASSQMELGDLCFSPLRGVVNIDEQDI TLTVSESRLLEALLKQPGEPLDKQELAQIALGRKLTLYDRSLDMHVSNLR KKIGPHPDGRPRIVALRSRGYYYSL >PFL_0493 methyl-accepting chemotaxis transducer MPRPFNRTDGTAHSRRVIGWTNITNVCIQPSAAGATFQPLIPIRKRCSMQ FWRRSIQWQLVLSMGSALLVSLLVVVAVYTVVINHLTQNYLVDKALPSSI EAMRNDIERILAQPLTVARDIASNGMLRDWLAGGEDPAQAQVFVDYLEGI RAENQAFTTLMVGTATNHYYNEKGLDRTLSRSNPKDAWFYSFIDSDKPRL LNIDTDVATGELAMFIDMRVKKDGKLVGVAGLGLKMQALSQLIHDFSFGE HGKVYLVRADGLIQVHPEAQFSGKRHLSEQIGESAAQAVMGHEGLASSRF VRDGEDFVALSLPLRGMGWSLVAEVPEAQIYADARQTLWLTTGIGLAIAL VCLLLVIWLARGLVRPVRQVTAGLVAIGSGGGDLTLRLDASRADELGDLA RGFNRFLDSQHGMIGEVLATTERLRSSVGQVAAVVENTAERSGRQQEMTD MVATAVHQMGLTVQDIARNAGQAADASQAARDEAQLAQGVVDGSIRHIES MSGEIALAASAVSELAHQVASIDQVLAVIRGVSEQTNLLALNAAIEAARA GEMGRGFAVVADEVRTLAQRTQASTDEIQQMIQSLKQGAENAVASMHAGQ SATGTGVQSSQQTGASLTAITGQVEHISDMNQQVATATEEQSAVTEEINR NVQGISDLARATAAEVQACREDCRTLQRLSEDLARQVGGFKLH >PFL_0182 hypothetical protein MANEEQTPMATIFGFAEKYLKRPLTQVERQVLEAFAQDKPLDMSRAAQQS VDQARQRATELMQSDGLRTRQIIDQLAGSAAAGKADPQARELVLRQLLAA AESEEPLSVSPPRAGLVTTAAAAAAAAALAPALSPASFPVDDPQLKAMIN ALVQQEVKAAVEARMAGLSQKVEDTLKQLTAGSGQ >PFL_1372 sigma factor regulatory protein, FecR/PupR family MTRFSGTHNDLDSEQIDAEAASWFARNRNDPDRATRKAFDAWVSEPAHAR AYAEFEELWVDLAQLQQLSRPIPLPRRKPAPWRPALAAAAAVLCAVLAVN LGTPQGPYIQQVAAQEKGARAFKLPDGSTLYVNANTQVKVDFSAQQRDIY LQQGQLYLEVAADKERPLWVHSGAAKVRVVGTAFDVRRGQRQLVVSVAHG QVAFSPDGKPGELTLLGARQQATYDLHKGTLRQQTLDSDEVADWRSGHLA FRNRDLASLVDELNLYRRQPVQLAEGSLGAYKVSGNLDVNDPDALIKALP VLIPVKAVPLADGQLRLEAR >PFL_6085 FHA domain protein, putative MSLCLTITSYHKITPGQCPEKLMDQGMMAIGRSSDNDWVLPDPERLVSAR HCVIQYKDGRYYLTDNSTNGVELVRAGIRMRRGSSEPLEDGEVIRIGDYE ISARIDFSLNRPGAEPFSGDSSNSFEALMGRQAASPTPIEPISMAPVAHF QGASAQDTFPDLFDFLAPSATPPATQPDHVPAEQHDFRPPTPTAVPQPVA PPEPSAPQGGAVIPEDWDLFGSTPASPAPVPSAPPVVAPPVVAAAPIAHQ ASFAAEPAQPQPQPQPQPQPIAQAPVAPVVSEVELAPVVTPAPAPVAPQG DLLQAFLRGAGLDQLRIEPQQAQAQMESLGRSYRLMVEGLIDVLRARSSL KGEFRMQQTMIRPVENNPLKFAPNVDEAMLLLLRHSNQAFMAPDQAVQDS FDDLRAHQLAVMAGVEAAIKHLLGRFEPTELEARMARPGGLGNLFSGSRQ AQNWQQFTALYKQISQEAQDDFQDLFGREFSRAYEEHTHRLRRS >PFL_3578 sensory box sensor histidine kinase/response regulator MNGPHSGSEAANLIARLDWSATPLGESGHWPQSLRTAVDIVIHSPMPMLL LWGAELTQIYNDGFALLAGNKHPSAFGHPAHLTWPELMDFTDPIYRAVLN GQVRTFSEQRFSLQRTNGSEYDLWLDLTYSPIRNERGDVAGILVTAIETN ERRRIALELQQRSDDSLRAQHETEERLQLALAATDAVGTWDWDIGEDRFI ADAHFAQLHSVDPQQSRQLPISEYLKGVHPEDRGMVARGIKHCITHGTEY AEEYRLQLADGQLRWVFARGRCYKDHHGRPTRFLGAALDLTERKQMEQAL RQSQTELQLIINAMPVLIGYVDHEERFRLNNSAYLDWYGLTPQELYGKSI REVVGDEIYATRAENIKAALAGKPCSFEANSPHRDGRPRHALMKYLPRYG ADGAINGFYIFVIDETERRQTEEALRNLNETLEERVNQRTEALATANQRL QNEMFERERAEDALRHAQKMEAVGQLTGGIAHDFNNMLTGIIGSLDLMQR YIDNGRGAEIGRFTEAAMSSAKRAASLTHRLLAFSRRQSLDRQPLDPNQL VRSLQELFNHTKGEHIELQMQLADGVWPVNTDASQLENALLNLVINARDA MPDGGRLLIETANSYLDGSDISTLEPVKAGDYVMLGVSDNGAGMSPRILA KAFDPFFTTKPIGQGTGLGLSMIYGFAQQSGGHVTISSEPDQGTCVRLYL PRLFAAPLDSAEPATLNQAPQAIAGETVVVVEDDPAVRMLVLNVLAELGY RAFEAEDARSALPLLESPMRVDLLVTDVGLPGMNGRQLAEIARQQRPGLK VLFMTGYAEKAAERQGFLEPGMDLMAKPFSIEEMAQKIRQMIGRAS >PFL_2638 sensor protein RstB, putative MLRLFLGLYLFLALGFAGAMTAVQHIFINYLAADLIESYNRDAVRGPAYS LSEQLRPFDEAGRQQQLEQLKPHYGLLLKLVQADDLDLSVREQALLDSNQ LVVREEFTEFIGSIDGGKQLLSIKLPEDPPLTLLYNIAAYALLGALLAIV LYFWVRPHWRDLERLRLAAERFGDNDLGTRLHLSRRSNIRDLAQHFNRMA ARIEGLIANQRELTNAVSHELRTPIARLSFELDQLQQQPDPDENRELIAD MYADLGELEEMVSELLSYASLEHGAATINRENIQAQSWLDSVVGSVALEA EAAGVQLLIRSCQVEYVRIEPRFMARAVINLLRNAIRYADRRVEVSLVRL EHGYEVRVNDDGPGVPVDGREKIFEPFSRLDASRDRRTGGFGLGLALVRR VSQWHGGKVEVADSEWGGASFRMTWAHLD >PFL_1902 sensory box-containing diguanylate cyclase, putative MDEKYRRAVDAAAIFSETDLGGSITYVNDLFCQVSGYSREELIGANHRML SSGLHPPEFFAELWQTITQGRVWKGEICNRAKDGSLYWVDSTMVPLVDQR SGQVVRYVSIRFDVSEKRQLLHSLQWRVGHDVLTGLPNRAFLSDLLHQAL DFSRAQDIPLAVCMLDLDGFKAVNDGYGHACGDLLLVEVAARLRSIIRGE DVVARLAGDEFVLILRYVRDMLELRAALQRVLATISQPYSIQGKDINVFA SIGVTLYPTDNHDADTLLRHADQAMYVAKQSGRNRFHLFDVLRDREVMVT YQTVEQVRQALLAGELRLYFQPKVNMRTGEVVGFEAMLRWQHPQRGMLGA QEFLQQVEETDLIVEIGEWVMDQVMTRLQGWQQAGLGWPVSLNVAARHFQ RPDFVERLKDMLDRYPDVLPALLDLEIVESVAIDNIQRVSDCLDACQGFG VQFSLGDFGTGHSSLSYLKRLRTQTIKIDRLFVRDMLHDADDQALIQALV GLAQAFGRRVVAEGLESLAHGERLMALGCDVAQGDFIAPPMPAEAVLDWV RSFEPPRAWRSDELQGEAMSGG >PFL_2061 sensory box/GGDEF domain/EAL domain protein MPRRSAMSIPHPTNDSAQGLTSMPKPADRIPPLPRIHAVDPRESEQSWEN APQLLAALNGARLGAWYWDIESGQISWSRGTQALFGFDPRQPLPENLEYL DLLPIEDRARTIRAFHSVLAGAPLEHAMHHRIRWPDGSLHWLEINGSVLP DKHGKPRMIGVIREITHQRQREEALSSSEKRFATLFHLCPNTVLLTRLED GLISEANQYFESQFGWPAEHVIGRTTLEIGLWVNPEQRAQLIKAVQKKGQ AASLEVQFRASNGQIHDGILSAQKVELEGKAYLLSTFLDTSERKRSEQAL KDSQERLDLALDSAQLGTWDWHIPSGMLYGSARAAQLHGLEPIPFHESFD AFFEGVPTEERNSMRDAYRSLREGPAGNYQLTYRVQLEDGSSRYLESRAR LYRDEQGSPLRMAGTLLDITEQVEREQRLITSEEKFASLFQVSPDPICVT LLETGQFIEINSSFTQTFGWTLDEVLNRSAEQIGLWEDAAPRLRRIEQVI REQALNNVAVVVHHKNGQPLTCIISSRLITVDKQPCIVTNLRDITQQQRS EAALKASEEKFAKAFHSSPDAISITERDTGRYLEVNDGFCRLTGHRNDEV IGRTMYQIGIWAEEAQLSTLLAELQIKGRVHHLEMLGRNKRGEILTLEVS VEPITLNETPCLLMTARDVSLLKNAQAQIRHLAYHDPLTNLPNRALLMDR LSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLEA SVRMEDTVARLGGDEFVVLLSGLEGTRNEVSEQVRQLADTLRELLSEPMF LDGQRLQVTPSIGVALIPDHGSTPTDLLKRADIALYRAKDSGRNTTQMFH NTMQKAASERLRMETDLRLALSRGEFSVHFQPQVDARDNRIVGAEALVRW QHPELGAQSPTEFIKVLEDSGLILEVGTWILDEACLAFSQLIDQKLVDPQ HFSLCVNISPRQFRQTDFVERVEHSLHAYALPSSLLKLEITEGIVIQNLE DTINKMRRLKKLGVSFAMDDFGTGYSSLTYLKRLPVDTLKIDQSFVRDAT HDPNDAEIIRAIVAMARSLNLKVIAEGVETPQQLEFLQGLECHLYQGFLH SRPLPLSEFKKLLE >PFL_5111 DNA-binding response regulator ColR, putative MHIHLLLVEDNLDLANTVIEYLEIGGIVCDHASNGQTGLNLALSQHYDVI LLDIMLPRLDGQQLCEQLRQNGSQTPILMLTSLDALSDKLASFAAGADDY LVKPFELAELVARIRALSLRRSGQASRLQVADLVMELTTRKVSRAGQELH LSPICWTLLECLMRASPEPVTRERLEATIWGDEPPDSNTLKVHMHRLRKT VDKSFDQPLIHTLPGIGIQLRSHA >PFL_4203 chemotaxis protein CheV MAGILDTVDQRTQLVGENRLEILMFRLAGRQLFAINVFKVQEVLQLPKLT LMPQRHPFVCGVVNLRGQTLPVIDLSQAIGMRPLVPGPNSTIIVTEYNRS VQAFLVGGVDRIVNMNWEAIMPPPTSAGRQHYLTAISKVDDQLVEIIDVE KVLAEIVPYNAKVSRDKLEDPVLERARGREVLLVDDSNVALSQLRDTLGQ LGVKMHIASDGLKALNMLKAWADTDVVMTDKLLMVFTDAEMPEMDGYRLT TEIRNDPRLRGLYVVLHTSLSGSFNESMVKKVGCDNFLSKFQPDKLVDVV RQRLMLDEADA >PFL_2203 sensory box histidine kinase/response regulator MACTSTRPSPGSPLPVVELRPAAELQAQLDCLQRENRKLRRINSALIERV ESGITRGNDPYAAFQHSVVLAEQVRERTDALNQAMAELKAGNHLLSEARL RAETAHQHLIDAIESISDAFVLFDQEQRIVLFNSRFRAFWSHSRVRIMAG MRLSEVRRLLTSTGLFSEEPRSGGDEQLLYRLHNGRWLQVSERPTREGGR VILFTDITEVKHSETLRREQAVAQKSHLLQRAVDNLSQGVAMVSAEGVLE LWNRRFLELSGLAPVAAHRLFAEVIGDSELRLLSPDSRDANGRPIHECEQ RLSDGRVLEIRTHPLPTGGFVNTFTDITERYQHAEALSESERWIRLITDH VPALIAYLNADLVYEFTNKVYEEWYCWPRGVMLGQSLREVHSEQHYQRLE SYVERALAGESVTFEFAETNINNQERYMLRSYVPNRLANGEVVGIFVLIR DITERRRTAEALHQAYQNLELRVRERTAELTTLNQQLLREIEERSRVESR LREAKAEAERANLSKTKFLAAVSHDLLQPLNAARLFTSALLERRDPQASS ALVRNVSNSLEDVENLLGTLVDISKLDAGVIKADIAPFALSELLENLAAE YAQVARSEGLELHFVACSALVRSDIQLLARILRNLLSNAIRYTRQGRVVL GCRRQGRWLSIQVWDSGMGIAAERLEEIFQEFKRGEEQRPDQDRGLGLGL AIVEKIAGILGHRIGVRSWPGRGSVFSVQVPISASAPLPAPRPELGDALL ERLQGARIWVLDNDAAICAGMRTLLEGWGCQVITALSEEDLARQVDDYRA EADLLIADYHLDQQQNGIDAVARINARRALAIPAMMITANYSNELKQQLR ELGHTLMHKPVRPMKLKTAISHLLSPATPTPHH >PFL_1267 amino acid ABC transporter, periplasmic amino acid-binding protein MKKALLTLSALALCMAAGSALAKEYKELRFGVDPSYAPFESKAADGSLVG FDIDLGNAICAELKVKCKWVESDFDGMIPGLKANKFDGVISSMTVTPARE KVIDFSNELFSGPTAFVFKKGSGLSEDTASLKGKTVGYEQGTIQEAYAKA VLDKAGVKTQAYQNQDQVYADLTSGRLDASIQDMLQAELGFLKSPQGADY EISKPVDDPLLPAKTAVGISKGNKELKALLDKGIKALHDDGTYATIQKKH FGDLNLYSGK >PFL_2954 sensor histidine kinase/response regulator MRLPPRPLFFVLILWLALPVFAQDRVKIRARQPLDFLDIRPSIDEQTWLR NKEALLVGIVSGDLPPYREINQRHELEGIGADYLGALQRELAIPVEVRTY PNTDAAYHALRSGEVDLVDSATQVEAEDYQVRLSPSYAVTELALYAESGD LRDYRANISRTRIAATRGMALELYLRTGGRGLIQLYDSPRAAMGSVLDGD ADIYLGDSLSTGYLSSQLFSDQLVISHSARLPEIQVGFAVARDNTHLQQL LERALGGIKRCQVISALQMWGGTGNCDSNSFRERLDADQRLWLEHAPPVR LVISDDLAPYAFFNSRGLFNGIASDLLDLIRRKSGLRFEVSRVGSLKQVD TRLREGRGDLSILARANPRRASYLYTRPIVTTPYVIVRKTDAPPLAPLNR DSIGSVALASGYLQSEDLRERYPRLWVQQTSTVAEALNRVRQGKADFTLA PANLANYYLSFRLQNSLKIHGMMQGLEARIAFAAPQSQQQLIAIIDQAMA EISPQEYLQILGRWRASGSTDDSYWKGVTAFTWKILGSLGLMLMLAAWWI LSQRRRIIRKRLDLLQRQLILDQLRDAKEAAEHASRSKTVFLTTMSHEIR TPLSAIVGMLELVLTRDNDRELNTRSVHIAYESAQNLLALIGHILDISRI ESGRLTLRPEAASLKDLIESVANVFDGLARQKHLDIHLQFDAWATAQVWI DGLKFKQIISNLLSNAIKFTEQGEIHIRCLGQVKDEHFLDFHVEVIDTGP GIPASQIQKIFTPFFEVDSVVSNPNAGSGLGLSISHSLTQLMNGSLQVQS ELGVGTRMTFKACFQRVADERSSTTDSAEQTVLNSTDQPLCVLIVEDHLP SQYLLNQQINYLGHEALIAYNGLEGLAMWQEHDVDIIITDCNMPQMSGHE MSQAIRRMEGQMGVRPCTIIGLTASAQLEELERCLASGMDSALAKPISLA GLNRLIPKLSLTPPQAQSAVPSLNGDIHAALAEHVINSNNEELQALSKAL ASGNRQALKAIAHKLKGTAYLLNAQGLLELCVSLEELVAEAAQEQQLSTA VARLDQALRDLNQSLQVY >PFL_4996 sensor histidine kinase MKLIKPLWRYRLRDTVARWIALTIIMAMLTALAFNALFVQLAGVWAYPPL AETGLLEKSAAIVRMVEASEPGQRSRLAASVSTDHLSIVWQATRQGLDLP LLEDSEYRDGSEAFRALLGPPQRHIEAYQPSDWRSDQGRYALLVQLSDQS WLMFSSASRSWGLEEGTRNLIVIALVLISTGLVALIATRRLAKPLQQFAQ GARRFAVDFRAPPIDPVGPHEIRQAILAFNAMQAQLQHFIKDRTQMLAAI SHDLRTPLTRMRLRGEFIEDADQQQRLFRDVDEMQAMINSALEFFRDDAR LEQATHFDLAELLQTLVDDYRDQSMEILFTGPPRLVYCGRPLGLKRVMTN LLDNALKYGAQPAIALEQGADQVRVRVLDRGPGIPPEALEQVFAPFFRLE SSRNKSTGGVGLGLSAARAIVREHGGELRLFNREGGGLEARVELPL >PFL_0342 amino acid ABC transporter, periplasmic amino acid-binding protein MQSYKKILLAAAVTLAFSASAAAETLKMGIEAAYPPFNNKDASGQVVGFD KDIGDALCAKMKVECTVVTSDWDGIIPALNAKKFDFLISSLSITDERKQA VDFTDPYYSNKLQFIAPKAKTDFKTDKASLKGKIIGAQRATLAGTWLEDN LGDDITIKLYDTQENAYLDLTSGRLDAILADKYVNYEWLKSDAGKPYEFK GEPMVESDKIGIAVRKKDPLREKLNAALKEIVADGTYKKINDKYFPFSIY >PFL_2747 sigma factor regulatory protein, FecR/PupR family MNIFSISTPQASADQQLLNEARDWLVLLTSGQATAADARALRQWCGQSPQ HAAAFEQTKALWHCLQPAAALLEQQARPRHFGRRAFLGGALAASAALFMV RLTVPGGFAGLTADFATEVGEQRRVDLAEGVSLELNTQTRISRRDLGAGE QGIELLEGEVEVFSQRLQPLKVQAGEGWLSARQARFNLRNTDHQVCVTCI EGSLQVDVAGRSIGLDSGRQLTYDPRSIGEPQVVDIHSVIAWREQVLVFD NASLNTVISEINRYRPGMLVLLNAELGKRKVQARFNLNQLAGVALLIRDA YGAKCTELPGGVVLLS >PFL_2709 sensor histidine kinase/response regulator MIALRPSGLLRRLLLFILLFSLCFTVLASSVQLYFEYRREMRDIDSRMEL IRAGYLGSLERNLWDLNQEQLTVQLQGLVDFSDVARVHLISNDFDLQQGS AELIGPLRVERFPLSYQPPSGPLRQLGELQVSTDLGAVYRRLYATGLASL LWMSVFLCGLAVALSGLFYRLVTRHLQVMADFARRVAAGELHEPLHLDKR QRPDGDEIDTVARALDDMRRAVLDDVQRREADRLALQDKRDELQKMVQRR TASLMHAKDEAEAANLAKSRFLATMSHELRTPLNGILGMAELLRSAPLGS QDRQRLQALHQAGEGLLSILNEVLSFARLEEGESRPEVRDFSLRQLLEEV TTLLQPRAEANRTRLELHIDEQLAPRQQGAEQYLRQVLSNLLANAIRFTE DGWVRVEVQVLHSAAEGQRLRCCVRDNGIGIAASMREKIFERFVQASDEV SRRYGGTGLGLAICKHLLQQLDGRIGVDSELGQGSSFWFELVLGVGQEPL PSPQLQVPAQGLKILVVEDVALNREVASGLLQRDGHQVWLAQDGEAALAL CRQQAFDLLLLDVHLPGISGVELCRDIRRRPGPNRQVRIFALTASVQPSV VRSYLQAGMQGILGKPLQLASLRQVLAGQVQVPQADTEEGLLDQSVLDTH RSLLGEQKLQGLLQVLADALDQQQPLLSDALAAEDCTEVLHLAHRLAGSA DSLGFCALARVLRELEGAAEQADRPALAALGVSLQTSWQQSRALLQQLLA A >PFL_3574 sigma-54 dependent transcriptional regulator MNDSESLKDYQRVRQLAIRSLFEIIEQSSEGTVIVDRDANIVWMNERYAR RFGLESAAFAIGKPCESVIPGSLLREVVRTGRPILLDMQDTPKEPLVVMR LPIHDDAGTVIGAIGFALFDELRSLSPMLKRYLSMQEELASTRSLLRARQ TKYNFAHFIGTSAASLEVKRRARRGASAESPILLQGETGTGKELLAQAIH AASPRAHKPFVSINSAAIPEALLEAEFFGTAPGAFTGADRKGRPGKLQIA QGGSLFLDEIGDMPLPLQSKLLRVLQEKEFEPVGSNEVIHSDVRIIAATS TDLEAAIKRGEFRADLYYRLNVLPIQVPALRERLDDLPALSEGILEELRS QHELDRDALALLAQHAWPGNIRELRNVLERAALLSDDLILNASDIRAAIG SFSPVQRNEALVPGDSPNQETFAAARERFDRQLIGATLAQCAGKVDEAAR RLGLGRSTLYKKMAALGIVESQ >PFL_0507 sensory box-containing diguanylate cyclase, putative MKSQPDAASRMAAEVVTQLPVPSRLGMLRFERLNEASWALLFLDPNCERQ FGLPAVELCALVGSPYASLMEPEARYQLHDTIQQQLSNSSHYLIRYTLHT AQGPLSILELGEAYKQHNRHLLRGYLLVVEGLFSDASALPALDLETQNTR LQIALELNQRAQQEQLQHLERVRAQQDLILLLTRQRYSTGNSLKEAAELI TRSACDIYQIDCASIWNLEDQQLVPIAAYHRGPQEYRMPESIDASSFPDY LEALHSCRAIDAQNAMRDPRTREMAESLRPRDVNAMLDASIRIDGQVVGV LCLEQTGMTRAWQSDEIAFAGELADQFAQVINNHNRRAATSALHLFQRAV EQSANAFLLVNCDGVVEYVNPSFTAITQYSTEEVHGHRLSELPALENLSE LLFDAPSSLAKSNSWQGEFKSRRKNLEPYWGQLSISKVYGDNRELTHYIG IYEDITQTKLAQQRIERLAYTDNLTNLGNRPAFIRNLDERFARDSDTPIS LLLVDIDNFKRINDSLGHQTGDKLLISLARRLRNSLSPSGSLARFASNEF AVLLDNTDLETGQQIASQLLMTLDKPMFVDNQLISVTGSVGLASAPLHGR DPQTLMRNAGLALHKAKANGKHQVQVFTEALNAEASYKLFVENNLRRALT QNELDVFYQPKLCLRSGRLLGMEALLRWNHPEKGMIRPDQFISVAEETGL IIPIGKWIARQACRMSKQLTAAGMGNLHVAINLSPKQFSDPDLVASIASI LKEEQLPSSLLELELTEGLLLEATDDTHQQLEQLKKLGLTLAMDDFGTGY SSLSYLKKFPIDIIKIDRSFIHEIPDNQDDMEITSAVIAMAHNLKIKVVA EGIETAEQLAFLRRHRCDVGQGYLFDRPIPGSELIAKLKRYPRGPIA >PFL_1964 heavy metal sensor histidine kinase MRRLSLSGRLALLFAACTAVVSLLAGVLFSRASEAHFIELDQQLLDGKLL ALRSALQDVNEAGDFPPRQARLQDELSHQPDLQLRVGDVNGQLWFDSAPG LPASLPGGAGLRSLEQAGTAYRLYTAALNPGQAASPQLTLILDITHHQHF LQRMQHLIWLTVGLSALATALLGAWAARSGLRPLRRMGAVAAGVSASSLT QRLPQEQMPAELAELASSFNAMLGRLEESFQRLSAFSADIAHELRTPLSN LLTHTQVTLTRPRPLEDYREALHSNLEELQWMAQLVNDMLYLAKADHGLL TPRREALELAQETDMLLEFYGPLAEDAQIELTREGQAGFAGDRSMLRRAL SNLLDNALRFTPAGGAVKVRINESAGHLNLSIENTGEGIAQDVLPRLFDR FYRADPARREGSSEHAGLGLAITQSIIRAHGGQIRCESAAGWTRFVIELP RQD >PFL_1965 DNA-binding heavy metal response regulator MKLLIVEDQPKTGHYLRQGLSEAGFNAELVADGSTGQHQALTGDYALLIL DVMLPGRNGWQILQAVRSAGLEMPVLFLTARDAVQDRVHGLELGADDYLV KPFAFSELLARVRSLLRRGSAVAQETSLQLADLRLDLIRRRVERGSQRID LTAKEFALLEMLLRRQGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRL KIDDDFPNKLIHTVRGMGYVLEERQA >PFL_2568 sensory box transcriptional regulator, LuxR family MSQAVLATETNRRQLQQIISGLSDGVILIETDKARTLLWANEAALAMHGV STVEQLGGNLREYARRYALRYRNNHPLGLDSYPINRVAAGETFSDVVVEV QAEIDGEPRHWVHRVRSMILEDRNGAPESLVLILSDATDWASAEQRFEKT FNANPAPAVICRLGDLRYIKVNQGFLEMTGYARDQVIGRSVYELDVLEDA EHKELAVERLGQGATIPQMQAELRLPEGGSKLVIVAGQPLDINDEDCMLF SFMDLEPRRKAEIALRQSEERFAKSFRLTPVPTLVCSAEQQIVDVNEAFL DTCGYSSEELLGKTVQDIGFIAEPQAAEQLFGRLEKSGNVMGLDLKVRKK GAEQVDCVAYADTVLIQDSPCYLLVLMDISERKRSELELVGAIEEVMRDA SWFSQTLIEKLANVRNTRSAQAPAVTSAELTTREREVLGLIYQGLADKEI AAQLQLAPNTVRNHVATLYSKLDVHSRGEAIVWARERGLFAGSAG >PFL_1442 sensor histidine kinase MHKPSSLRWRLLWNLALLLVVLMLASGLSAYWNGREAADTAYDRTLLASA RTIAAGLSQRDGSLSANVPYVALDTFAYDSAGRIYYQVNDIHQTLISGYE NLPGPPPGTPRTDDYPALARFYDARYQGQNVRVVSLLKAVSEPNMNGMAE IRVAETDEARVAMARSLMADTLLRLGMLAIGALVLVWFAVSAALRPLERL RGAVEERQPDDLRPLPLVSVQRELWPLVRALNHFTERLRGQFERQAQFIA EAAHELRTPLAALKARLELGLRASEPDTWRATLESAAQGTDRLTHLANQL LSLARVENGARAIAEGGAQLLDLSQLARELGMAMAPLAHARGVALALEAD EPVWLRGEPTLLNELLSNLVDNALAHTPPGGNVVLRVSPPGVLEVEDDGP GIPLEDRDRVFERFYRRNQQGAGSGLGLAIVGEICRAHLAQISLHDGEPS GLKVRVSFTAG >PFL_5042 chemotaxis protein CheV MSVARATSQFSPEKVFMSSNKARADSLSLLLFTLRSGKLMAINLLKVSEI IPCPPLTKLPESHPHVKGIATLRGNSLSVIDLSRAIGERPLADPDSGCLI VTDVSRSKQGLHVQAVSKIVHCLTTDIRPPPFGSGGLRSYITGVTQVDGT LVQVLDIEKVIHGIAPAQIEMAPTELSMEDAEALGNARILVVDDSQVALQ QSVHTLRNLGLQCHTARSAKEAIDCLLELQGTANEINLIVSDIEMSEMDG YALTRTLRETPDFAHLYVLLHTSLDSAMNSEKARVAGANAVLTKFSSPEL TRCLIDAAKTIATQGA >PFL_2708 periplasmic amino acid-binding protein-related protein MLRRALVLCLSLCLIPLAGATWAEPAPQPQPVLRYCDYPVYPPISWSDGS QVRGLAPTVVRQVLGDLGYQVQVVVLGNWKRCLLDAAAGRVDVVLAYSTG QRQQDLLFSRVPVLREEVALFVNRRNLPSFTNLQDLTAYRGGLLFGESYG QDFDREVVQHGNIEWVSSSQQNFGKLIRQRIDFIPHERRTGQLFIEQLPG AQDIIALPQAVSVDYLRLAVSRHSPLAPRMAEIDTQLQRQVDSGAIQRWL AQSQDGYRAMLKAQVEGRP >PFL_1903 conserved hypothetical protein MRLTWCALFLFSASLEAAEPPLRFAIADSWTMPAIEVEGDQPTDGILFDT MNSLARHLGTPAQFHVLARARVQNAMAQGEVDVRCYAAQAWLPNLSGDYL WSVPLFIQRNLLVSTHPEPSAVNLQQLSRQHIGTVLSYTYTPLQPLFDTN QLIRDDARNEEQVLQKLVVGRYRYAIASQWTLDWFNKTQATGNPLYSVAV LQEQAVGCYVRNDPRVPAQRILRTLLRMKMSGEIDAIIQRYVGPQDDAQP PDIASP >PFL_4895 response regulator/HD domain protein MGELNVATVTRRPEILLVDSQEVILQRLQQLLSPLPYTLHFARDATQALQ LLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIA KAINEGEIYRYLSKPWDDQELLLALRQALEHQHSERERLRLQDLAQQQNA ELKALNTLLEKRVAARTSELQQTADMLDLAYEELKPSYATGAELFSLLVN QRLPADKQTNRRIIELVRAYCKVQGIDPGAQRDLAMAAALHNIGKLSWSD SMMTSPADLLHHHQRERYRAYPAQSESLLMTLEPVQDAARLIRHHQEHWD GSGFPDHLKGDAIPLGSRLLKLAVDFIELQCGLILERHMNSDEALVFIRK YAGRLYDPDLVEGFIQVCAVYLSDVTLGDPSVKVLSTRELAAGMILARNL NADNGMLLLNAGKVLNLPLVDKLIAFETMEGARYSVFVKLPQEQQARA >PFL_4066 transcriptional regulator-related protein MFDNLGHGPNHLLNALPAAVQERLLPHLKPVALSLGQVLYESGDIPRHVY FPTDAVVSLLYLMENGASAEIAVVGNEGLVGVALVMGGESTTSRAIVQSA GHALRLPGQRLKDEFNRHGEMLLLMLRYTQSLITQMAQTAVCNRHHSIDQ QLCRWLLLSLDRLPGNQLVMTQELIANMLGVRREGVTEAAGKLQRQGIIE YSRGRINVLDRPRLEQHSCECYGVVRKETERLLPYLPGSKRADPD >PFL_2164 DNA-binding response regulator, LuxR family MTSVAQQLVYVVDDDPGMLDSTVWLLESVGLKALPFTSGREFLEHCDPSL NACVLLDVRMPGMGGLNVQEELRQRDIRLPLIFVSGHADVPIVVRAFKAG AVDFIEKPYNEQLLLDSVQQALSRADNHQNQSAGQARVQALLESLTPREK DVLLPLVQGYTNREIAEQLGVSIKTIDLYRSRVMKRMQAEHLPELVGMAI AAGLVDPLHLR >PFL_0983 sigma factor regulatory protein, FecR/PupR family MNPHLNGQPDFSNQVAEQAVHWLIEMQGGPLSPRQQQAWQQWHDAHSEHQ RAWEHIQRVNQRLRGLSSPLAHAALNAPKSASRRQVLKLLLILGAGSAAA WGLREHNPLPPLLADYRSPLGQRRKLQLSDGSQLQLNTSSAVDVRFDGQQ RLIRLLEGEIMLTSAQDARPLRVQTAQGQVSPQGARLNLRQFKDYTQLAV FSGTVGVTPLDYATTPPQVAAGQQLNFTGNSWQAPRALDAGSGAWSEGML VAAHMRLADFLDELGRYRRGQLNCDAQVADLLISGSYPLDDSERILDLLE ISLPVKVRRFTRYWVTVQARA >PFL_1129 methyl-accepting chemotaxis protein MKNWTLRQRILASFAVIIAIMLLMVVVSYSRLLKIESGEERMRNDAVPGV YFSSMIRSAWVDTYLQTQEIIGLKQNQDISAEDKADFKAFEERLQTQMTN YKQTINSREDQSEFDAFEKDLQEFNRIQAAVLDLHQRRQEAEAIRLFNEQ LTPAWTAGRMKLNDIISENKAVADSATAAIDDAVAAAKVSMGVSLLLAVL AAGLCGLLLMRAIMAPMNRIVSILEIMRTGDLSGRLNLDRKDEFGAVETG FNDMMTELTALVSQAQRSSVQVTTSVTEIAATSKQQQATATETAATTTEI GATSREIAATSRDLVRTMTEVSSAADQASVLAGSGQQGLARMEDTMHSVM GAADLVNAKLAILNEKAGNINQVVVTIVKVADQTNLLSLNAAIEAEKAGE YGRGFAVVATEVRRLADQTAVATYDIEQMVREIQSAVSAGVMGMDKFSEE VRRGMAEVQQVGEQLSQIIHQVQALAPRVLMVNEGMQAQATGAEQINHAL VQLGDASSQTVESLRQASFAIDELSQVAVGLRSGVSRFKV >PFL_5913 amino acid ABC transporter, periplasmic amino acid-binding protein, putative MRFLPGLLLLLPLASTCAQAELMDDINDRGELRIALEADTPPFNFKDDGK LTGFEVELGQLLASELDVRADFVVTEAAELLPGVESGKFDVAINHIAMTP ELKDRFDFSEPYSYSSAQLIVRKEEQRPLFSLQALRGQALGVAQGSQFVD QARTVEGINLRSYADAQQPIKDVADKQIDAAISDRLLIPYAIRDSRLPVK EGAKVGPTLSLAIPFQKGNPAFRASLDSALQRIKADGRLMALSEKWFGMD ASKPPKAEAGQ >PFL_4521 arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein MKKLVLLGALALSVLSLPTFADEKPLKIGIEAAYPPFASKAPDGSIVGFD YDIGNALCEEMKVKCVWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKS VDFTNKYYNTPARLVMKAGTQISDGLAELKGKNIGVQRGSIHERFAREVL APLGAQIKPYGSQNEIYLDVAAGRLDGTVADATLLNDGFLKTDAGKGFAF VGPAFTDVKYFGDGVGIAVRKGDKADLDKINAAIAAIRENGKYKQIQDKY FDFDIYGK >PFL_4871 amino acid ABC transporter, periplasmic amino acid-binding protein MRIVPHLLGAAIAAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPF SYIADASGVPVGYSHDIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLV QNGTVDVECGSTTNNVERQQQVDFSVGIFEIGTRLLSKKDSSYKDFADLK GKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAF MMDDALLAGEMAKAKKPTDWAVTGTPQSYEIYGCMVRKGDAPFKKAVDDA IVATYKSGEINKIYDKWFQSPIPPKGLNLMFPMSDELKALIANPTDKAAD DKKS >PFL_1112 PspA/IM30 family protein MNVWSKLLTALRGGANEAGEALVDSQALRILDQEIRDADQELRKSKEALA EIMARQKLAAERANGSAAKIAEYESYALKALEAGNEALAQEVAQKIANLE NDLAVEREQADGFAASVAQLRKAVTQAEGNIKHLKQQVDTVKATESVQKA QQAVAQRYGGSQSKLHTAVESLERIKQKQAERAAKMDAAAELANTSSPDD ALDAKLREAGIVAGSTSADSVLARLKDRSKS >PFL_3252 response regulator MPASASTILVVEDDAIVRMLIVDVLEELEFSVLEADGSEAALSLLEDAGQ HIDLLMTDVGLPGMNGRELAERARTLRPQLPVLFASGYAESIEVPAGMSV IGKPFSIDQLRDKVRSILG >PFL_0744 GGDEF domain protein MKLFKPNARPTLRSVIGRGHLIVALLAISMASLSLTFLGVLALRVYADHN LHLIARSISYTVEAAVVFNDSVVATEALALIASTEEVADAKVYDSQGQLL ASWQRPESGFLTNLEMHVASAFLEKPISLPILHQGREIGTINVTGHGGSL LRFLLSGLVGIVLCIALSAWLALYLARRQLRGITGPLRSLADVAHAARRE RAFDQRVPPAEIAELDNLGNDFNALLDELEAWQTHLQSENETLAHQASHD SLTGLPNRAFFEGRLIRALRSANKLNERMAVLFLDSDRFKEINDNFGHAA GDAVLVAVATRIRAQLREDDLVARLGGDEFAVLLTPLHRVEDAQRIADKI ISSMEVPIQLPGSLSILTSLSIGIAVYPDHGATPGSLLNAADAAMYQAKR GSRGGQHTVGAEPPIVQVQNRS >PFL_2635 universal stress protein family MQSIRSILVVIDPTPGESLALKRAKLIAGVTQAHLHLLVCDRKHEHSALL SVLKSSLTGEGYSVTTEQAWNESLHETIIDVQQAEGCGLVIKQHLPDAPL KKALLTPADWKLLRYCPTPVLLVKTATPWVGGVVMAAIDVGNMDGEHRAL HASIVDHGFDIASLAKAQLHVISAHPSPMLSAADPVFQLKETIEARYREQ CKAFQAEFDIDDAHLHIEEGPADVLIPHLAHKLGAVLTIIGTVARTGISG ALIGNTAEVVLDSLDSDVLVLKPADIMDHLEELAAKA >PFL_1238 DNA-binding response regulator, LuxR family MATYEILIADDHPLFRSALHQAVTLGLGPDVRLVEVASIAELEVRLTEKS DWDLVLLDLNMPGAYGFSGLVLLRGQYPQIPVVMVSAQEEASVMVRSREF GASGFIPKSSSLEVIQQAVRSVLDGDVWWPPQAFEEVSVSAEAKAASEGL ASLTPQQFRVLTMVCEGLLNKQIAYELSVSEATIKAHVTAIFRKLGVRTR TQAALLLQQLESISSH >PFL_1304 signaling repeat/GGDEF domain/EAL domain protein MDWLGVHFITELPQAGQVVLHCTHNPVLVLLAYLVACAASFATLDMAERV SHAERPASQRLWRWVGACCLAGGIWAMHFIAMLAFEAPLQIHYDLPLTLL SLLIALVAAWLAMNTLSHAHMPLWRYGVASIWIGLGIAAMHYVGMAAMRS SASLYYDPLLMALSVLVAIACSLAALLLSRHLREGSGMFHQLLKYASSLV LGAAIVLMHFTGIWAMTLVLPAGSLPAPATSDGHLQLGLTLSAIVLLIIG SGISAALADKKLQHKERDLRRVNALLSQLDQARVSLQQVAHYDALTNLIN RRGFNQLFAEKLIEKTTFGGMLAVMFLDIDHFKRINDSLGHDAGDELLKV IAGHIKSSTRSHEDVVARLGGDEFCILINLYDREEARQMAQRIMQKMKEP IELGGRRMVMTTSIGISVFPDDGKTCEELLKNADLALYQSKDCGRNSLHF FNSHLKTRATLELQLEEELRNALRDDQGLLLYYQPIYDLKSGRVTKLEAL IRWQHPQHGLLTPDRFISIAEANGMIAELDNWVLRKACADLAYLSRHGCG ELKIAVNCSALNLTREELAGEIESALRQAQVAPQRLELEVTENALMGNIA STLALLKQIRGLGVSLSIDDFGTGYSSLAYLKRLPLNTLKIDRSFIQDIP KSTQDMEIVQAIIIMAHTLHLQVVTEGVETPEQQAFLQHHGCDYLQGYLL SHPVPLRELRGVLEELDQRHAAPINPRAPGPDKGEPGSLDLFPDSPAHHA DASTAQLIR >PFL_3330 sensory box-containing diguanylate cyclase, putative MENFGLDPSQGRSTSNQALTRATLLGCSGLLLALFLFTGVLLVYIALDQN LEAEQHNRLDIDKALQSFAGNARTTLKDYALWGDAYQHLHLKVDLDWAFN RQNFGPTLYRDLGFDGVFVINPAGHTVYSLVAGDLSEMDARDWLGEALPP LVSAAREAGGKVVDRYQSIAGTPALVLAAVIGPGNDPQVRPDAGPQSVLI FVARFDPARLLALGQGLDIEHLQVARAATDQSLPTLDLPDGAGTLQWRPA RPGHQLLVLVMPLLLLAGLLVGLMAAFLLRRADAAAQVMDRQVQALRANR WALAASEERFRDVAEAASDWIWEVDGQLCFTYLSERFEAVTGLTRESTLG RPMTELLSCEQGSLGQWLAAPERRSQAIQQCLYRDGQGQARVCRLSVRAM AAGGFRGTASDITEEVAARRRVEYLSQHDALTGLANRTRMQEFLEGRLQA PPTLQEPLLMLSVDLDRFKPVNDLLGHAAGDQVLHEVSQRLAQCLRSEDL VARVGGDEFVLVVTGQVAGHEIEGLCRRLIERIEEPFYIAGHEVFISASI GIARAPGDASQAEELLRFADIALYEAKAAGRSTWRFYAPYMNVRIIERRR LERDLRHAIEQDQLLLHFQPRYRVLDGQLMGAEALVRWQHPQHGLLGPDV FVPIAEDTGLILPLSNWVLHAACRAARAWPEGRLLAVKLSPAEFLRGQLV ARIAAVLKQSGLEPSRLELEMTDKVLLDDSRHVLTIMQGLKALGVQLLID DFGTGYSALQYLQTFPLDGLKIDSSFIARLNHNDAGRSIVEAIVDLGHAL SLRVVAEGVQAAEQFGVLRDIQCDEVQGPHLSPPLDQEALLELYGEAARA SRPIT >PFL_2652 conserved hypothetical protein MSSLERAIALAAQAHAGQVDKGGAPYILHPLRVMLRLTHPEARIVAVLHD VLEDCPITPEQLRGEGFSEEVLAALLALTKVAGEDYPAFIRRAGANPLAR QVKLADLAENSDLSRIPEPGAEDLRRLEKYRQATDYLNSLACD >PFL_5112 sensor histidine kinase MRNGLSLKWVISGSFLLLIAVVLLIYSLLLPEYSVRGLLYTASAMMEEEA QYFARHYNKDPTTPPPHNYFYTSVIGKEALPEKVRQLLDTPPSLSFGAVQ VFGDLDSDDDDEGRAILAQPLADGKTLYMYDVDHDQEEGGEVETPLSDAY LDRELHGVIFISLAVFIPALIIIALLVWWLVRPLGRLSQWSSTLKDPDTV AGERPNFSFKEFNMLADALAQSMQQVQAASLREGRLLRYTSHELRTPLAV LKANIELLTLQSGGSLPPPLQRIERSVLNMQRIAETLLWMSRELPEALPE EPIDMSGLVNELIQEQRYLIGTRDIELTLDISTTPCRLPLTACRIVVGNF LRNALQYADDGTIEIHFDYPRLRILNRIREAKQIEPSSDYGYGLGLELMR QLCARLGWRIDVLVEEQRFSVTLDFDATPTEEAPPADPGEESA >PFL_4750 sensor histidine kinase MRLANFILIHMESILLEWERFARSIETPYPTQDVHGLRNQASRILNCIAH DMLTPQSDAQQFEKSQGRGPVADADKVAQNHAQARWSAGFTLNQMVAEYR ALRASVLRLWLSSEPEIKATHTDDMLRFNEAIDQALTGSIVSFEVVLEQT RKLFLGILGHDLRSPLGAALMGSDLLARSVTDRRQKNLAQQVGTSVRRAN RIVDDLLQLARSNLGEGIQIRKEPVELNTLCSQIVEEVRAYYPGVRVLFE EGEVLNGLFDPERMGQVLANLLGNAVQHGDVRKPIEVRLTRNPSETCFEV HNYGKPIATEAMPLLFSAGGSGYERGASSGLGLGLFIAAQIVAGHGGEIQ VQSTKEAGTTFRVRIPATSE >PFL_0234 glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein MKTAKSSLLLLPLFGLALLAGCDKSNDAPKPAATAASAAPAAGYLDKIKA RDKLIVGVFTDKPPFGFVDETGRYVGFDTDIGRQFAKDLLGDENKVEFVA VEPASRIPFLQSDKVDLILANMTVTPERKEAVEFTNPNLKVAVQALVPEG SAVKSLDDLASRTTIVTTGTTADIWLTQNHPDWKLLKFEKNTESLQALAN GRGDAYAQDNLILFSWSKQNPGYRVLPQTLGEQAPIAPAVKKGNIELRDW VNAELAKLGEEKYLLKLYDQYVRKELSDDTKPESVIVEGGKWQG >PFL_3246 sensor histidine kinase/response regulator MSPDLDFSERALVLTPHGRDSQLAQMMLKEAGFNSLITPHLPALCEQLEH GAGLVIIAAEALRGVDLEPLLRHLEQQPAWSDLPIVLLTQHGGPEQNPAS RFSEPLGNVSFLERPFHPATLISLVSAALRGRRRQYDARDRLIDLSQSEL RLQRTLETLEQQVEERTAQLRHNEEALRQSQKMEAVGQLTGGIAHDFNNM LTGIIGSLELLRRRLARGRTEDLDSLIDLGVTSANRAAGLTHRLLAFSRR QSLDSKPVEMNALVTSMDELLQRSLSESIELDMRLDPQLWVAEADPNQLE SALLNLVLNARDAMPNGGRLLVETLNQRLAPDFAQAHDNLKPGDYVLLRV SDNGCGMPEAIINRVFDPFFTTKPIGQGTGLGLSMIYGFSKQSRGHVTLN STLGRGTEVSLYLPRFVGDLEQAEHPLVQQPPHAQNGETVLIVEDDPAVR VLVCAVLSELGYAFVEAGDARSAMPILDSAQRIDLLISDVGLPGMNGRQL AEIGRQIRPELKVLFITGYAEHAAARGGFLEPGMQLITKPFTFDLLTAKV REMIRD >PFL_2985 sensory box sensor histidine kinase/response regulator MIAGGAAGALGNYYRVQVEDVYRASIQMQTREQAQDLEQWKSNGFAIGAL SILGRHNPSLKRIVLEPEPSADLMERATIPLKTLSLVVEANHAFVLNREG VVVAAHDQHGQTPLGLNVAFRPYFKVALDGGSSVYGAISATTGTRMFYMA APIFESRTRQDKVIGVLVARFDADRLDASLSKPYSDDLKMILSPSGVVLA ASSPAFILKSDRAWPWNRFTGEIRRQFSDYRFANGVPERLPFDAHQSVIQ LDGRRYSLSRVDFDWNDPSGPWTLITLGDLDTLLPGEQVLLIEGLSALVF LLLLWGGLRRLADARRHKRDVAQIEQSEQRLDMALQSGALGLWDWNLSLG TVINNDVWLQILGYSKQQMEQAFGHGLERWTALVHPDDYEPVMARLKAHL NDEVGEYRAEYRMRNKEGQWLWVLDIGKIMQRDASGAPARVTGVLQDISE RKAVEAQIQQSRQDAERATQAKSEFLDCMSHEIRTPLNAIIGMAHLALDL PLEPVQRDYIEKIDRAAKHLVGTINGVLDLSKIEAGKLSMEQVGFDLREL VDDVLLLVRQRAEEKALRLQLDIPASLPHRYVGDPLRLAQVLTNLVDNAI KFTEAGHVCIGVYLVRQWDHQALLCFSVTDTGVGISDEQQARLFNVFVQA DRSISRRYGGSGLGLTISKKIVQLMQGDIRVKSQPGQGATFKFSVQLSLP PLPLEENCATPAAPATGATAGQGAINDPVRWLAGTRVLVVEDNRLNQEVL QGLLQRVGGQVVLAANGAQALRLLLEEGRFDAVLMDCQMPVMDGFATTRK IRGYPHLRWLPIIAVTASSQADVQGRAVAAGMSDLLSKPLEVAAFYRTLV RWIKATDMPVAQVPAPPGTRVLNSTYAGIDTACGLAVVNQDLALHRKLLA DFRDSQQQVIERLWQAHAAGDLATLGFLAHSLQGNAGNIGATAVKEAAGQ LEEQAGGPAALGPLIEQLARCLEPVLAGLASLPGAADGDLAPQQLGLDPE QVLALERLAKLLSSHNAQALALIDELYEQYPCGPLRAIQERIYRLEFQQA HDLLVDFQG >PFL_0300 sigma-54 dependent DNA-binding response regulator MSHPESLDPQLQVVLIDDDPHLRQALSQTLDLAGLKVLSLAEAQGLAPRL ERDWPGVVVSDIRMPGMDGLELLNQLHAQDPELPVLLITGHGDVPLAVQA MRAGAYDFLEKPFASDALLDSVRRALDWRRLVLDNRSLRLALSDRQELSA RLVGQSAPMLRLRQQIGALAATRADVLILGETGAGKEVVARALHDLSGRR NGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFANGGTLFL DEIESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKEDLRQAA DQGRFRADLYYRLNVAPLRIPPLRERGEDVLMLFQHFADEASTRHGLPPQ ELQPGHRALLLRHSWPGNVRELQNAAERFALGLELALDNSEPGTLAAAAP SLIEGGLSEQVEHFEKTLIAAEMAQPHSSMRSLAEALGIPRKTLHDKLRK HGLNFADGGANQPGDESE >PFL_3693 sensory box sensor histidine kinase/response regulator MAERIRAFDWSATSLGALQHWSHSLCSTVQLMLGSPLPMVMLWGPLGYMI YNDAYAEFAGGRHPYLLGCAVEMGWPEVAEFNRGVMNTCLSGGTLSYHNK ELVLLRNGVPEDVWMDLYYSPVAGDDQAPAGVIAIVVETTAHVISERRRQ AAEAAYRAENERVQLALNAGALLGSFVWDVQADVLSCDERFARTFSYPAD QPLDNLPIDITESRIHPDDLPRIKELAHYSVTQGGPYNAEYRVRREDGSY TWVLACGRCEFDESGQALRFPGVLIDIQERKIAEEALRQLTRNLEQRVLE EVNARLSAEEQLRQVQKLEAIGGLTGGVAHDFNNLLQVIAGNLHLLSRHE AGNANVQRRTAAALTAVERGAKLSNQLLAFARRQPLSPASYNPRHLYEGL GELLQRALGETICIDVQLPAEPWCIHVDRNQLENAVLNLAINARDALGGE GRILISAENQVLDSRFCAGKGIAAGEYLCLSVADDGPGMPAEVLKQAFEP FFTTKADGHGTGLGLSMVFGFVKQSGGHIEIFSSPGQGTRVQMYFARSAE PSLQQAPRPGQRAGGGEESILVVEDNAEVRSAAVEMLEHEGYRVRTASNG DAAMQLLLDGLKVDLIFTDVVMPGLIKSTDLATWAKTQAPPIAVLFTSGH TRDMISRNHQLSPDTHLLSKPYGPADLSAMVRSVLEA >PFL_1938 universal stress protein family protein MPYHHILVAVDLTEECDPVIHRARELSVSNGAKLSLVHIVEPMAMAFGGD VPMDLSQLQQQQFDQARERLDRLINKYPELTKEYSHLTYGQPRQEIHHLA KEQECDLIVVGSHGRHGLALLLGSTANDVLHGAPCDVLAVHLVKR >PFL_1752 sensor histidine kinase MRGRFDTLFGRLFGVLLIAIVLAHLLAFFWFHHYGPPPPPPPPDSAQLIN GQPPPPYPRRPPRPWFGGPLVPLTFQFISLIIAAWYGAKLLSRPIQRLSA AAERLSENLDSPPLEEVGPREARQAASTFNQMQKRIREQVQQRGRMLGAV SHDLRTPLSRLKLRLEQIEDSKLQGQMRQDLDDMIKMLDATLSYLHEQRT SEAEQWMDVQALVESLCENAQDQGADAQAQGHCAPLLVQPMALQSCLNNL LDNALRYAGQATLALEDDRGQLLIRVIDHGPGIAADKREAVFEPFFRLEG SRNRNSGGVGLGMTIAREAAERLGGQLILEETPGGGLTAVLRLPRP >PFL_2955 DNA-binding response regulator, LuxR family MSKSVLIVDDHPVVCEAIRKTLESQGYTIVGETADGISALNMILSLRPDI VILDVSLEKMDGLTVLKRIAQANLDVRVLVFTAQSVDTYAMRCLQAGASG FVSKNEPLTKLLKAVDTIVEGYVFFPKKSMPFSDGGRGKHSSDVLAALTN RELEVLKLLAEGLTNLEIAEKLHLSNKTVSGHKINILSKLGVTSVVDLVN IARQNELV >PFL_6027 methyl-accepting chemotaxis protein MSQPRARIASQLGLALALILALVISGSTLFALRSLDSANLDTREEHLASE ARLLADQLNTFHGSLRESTQRLSGLFENRFSSGLSLHPEQPVSVAGVQTP GLHLGDVVLNNNFAEVDQFKQMTAGVATLFVRSGDDFVRVSTSLSKQDGS RAIGTLLDHAHPAYQKLMAGQGYVGRALLFERFYMTQYTPVLDRSGKVIA VLFVGFDYTDAQNAQFANLKRFRIGQSGSLALLDEQNKWLVPPAGVQAPE QAAQVMAQAAKEPGKGRFWSDQGEDFYSLAVPFEGGPWSVVASMPKAEIR AVTWSVGIRLVIGSLLAMLLAVGATVWLLRSKLAPLSDLVRQAQALGGGD LSARLNVASHDEIGQLARSFNQMGEALSTMVEHIRRSAAEVNGRAQVLSG LSSGAYEGMEQQSGEITSMAGAVEEFSATSLNIADNMGSTQRLAQENAQQ THIGRTSMQEASSSLEQIAGALNSTATVINTLGQRSQEIGGIVGVITAIA DQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTREATDEISQMIT SIQQETGHAIQTMEQGNRLMQEGLSRNADVASALALIDEQSRSAGEQFAA ITTATQEQSSTATVLSSNLQSIAQANSEQREVVSNLAVTARELETLAADL RQEVDRFR >PFL_5274 sigma-54 dependent DNA-binding response regulator MPHILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIPTFDLIV SDLRLPGAPGTELIKLGQGTPVLIMTSYASLRSAVDSMKMGAVDYIAKPF DHDEMLQAVARILRDRQSAENAPPDRPAAKAGATAERAGAGNNNGEIGII GSCAPMQDLYSKIRKVAPTDSNVLIQGESGTGKELVARALHNLSKRAKAP MISVNCAAIPETLIESELFGHEKGAFTGASAGRAGLVEAADGGTLFLDEI GELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLSKIG QFREDLYYRLHVIALKLPALRERGADVNEIANAFLARQSARVGRTDLKFA ADAEQAIRHYSWPGNVRELENAVERAVILCESPEISADLLGIDIELSDLE DDDFVGLPPQAGNTSHEPTEDLSLEDYFQHFVLEHQDHMTETELARKLGV SRKCLWERRQRLGIPRRKSGVASES >PFL_1671 protein-glutamate methylesterase CheB MAVKVLVVDDSGFFRRRVSEILSADSNIQVVGTATNGKEAIDQALALKPD VITMDYEMPMMDGITAVRHIMQRCPTPVLMFSSLTHEGARVTLDALDAGA VDFLPKNFEDISRNPEKVKQLLCEKVHSISRSNRRFSSYSAPAPQPASAP APAPSSFASSRSPAPAPAPARAAAPAASANSPAPKRKAYKLVAIGTSTGG PVALQRVLTQLPANFPAPIVLIQHMPAAFTKAFAERLDKLCRISVKEAED GDILRPGLALLAPGGKQMMVDGRGAVKILPGDERLNYKPCVDITFGSAAK SYSDKVLAVVLTGMGADGREGARLLKQGGSAVWAQDEASCVIYGMPMAIV KANLADAVYSLDDIGRHLVEACL >PFL_1592 conserved hypothetical protein MRKTLIALMFAAALPTVAMAMPEGHGPMGPMDGPRHSEHMRGKGPFSQLD LSREQRQQIGKLMGEQMHDRKAVVEKYLEKLSPADQKAMKDELTAKHQKT QADIRALLKPEQQKEFDTIVKKQEERRAEWAEFKAWKAQQPQKAQ >PFL_3324 response regulator MEDPQPVEPGRRPRVLLVDDEESILNSLKRLLRPEPYDVLLANSGARALE ILAEGPVDLVMSDARMPGMDGAALLARVREKYPAVRRILLTGYADLNTII KAVNDGQIHQYLSKPWNDEELLLILRQTLEHQLAERELKRLQQLVLEQNQ QLKASNASLERHVASRTAELQQTADMLDLAYEELKHSYVTATEVFSLLAN LRLPADKQTNRKIIELVRACCKRYGLDEASSRDLTMAAALYNIGKLSWSD AMLLAPADLLRHTDQARYRAYPEQSESVLMALEPMQDAARLILHHQERWD GSGFPQRLKGEAIPWGSRLLKLAVDFIELQCGLILERHMNSDEALLFIRK YAGRLYDPNLVEDFVQVCAAYQSDVTVDDPTVRVLGTRELQAGMVLRRNL NADNGMLLLNAGKVLSEPLVQKLIAFEAMEGARYSIFVSVPDA >PFL_4282 DNA-binding response regulator, LuxR family MGNIIIVDDHPLIRLAIRSVLDPHHHNIVAEADNGADAVQLVRKHLPDLL ILDLGIPNLDGFSVIAHIKSAGLHVKTLVLTSSDSKNFALRCLQAGAAGF LCKTENLHELANAVKAILSGYSYFPEDTINILQQNTNAANQESVLISRLT DREITVLKLLATGLNNQQIADALLISHKTVSTYKVRLLKRFNVSNLVALA ELAKRNAVV >PFL_4450 DNA-binding response regulator MTPVSVEPPRILTIEDDPVLGAYVREQLEHCGFAVTWCQNGPEGLGIARR RPFDVVLLDILLPGMDGLEVLTHFRQSHSTPVLLMSALGAEADRISGFRL GADDYLPKPFSMAELRVRIEAILRRVALDRRPMPPVPVSLAQSLRFDDER SDVFFAEQWAGLTRSEYRLLDTLHRNGDEVLSKAFLYQHVLQRGYAAHDR SLDMHVSQIRRKLKALGYSERELRTVWGKGYVLSALDELV >PFL_1986 peptidase S24-like domain MIDKESIRHMFAERLHAALDAKEIRQHGRGADIIKYLESKGISKSAQAVS KWLNGSAIPEIDSLTALAAWLGVRREWLEHGVMPALPFEDENQTDEHKAS TIQTTRVPVISWVEAINWSSRSLDNETLREKTTLPCPLAISKSGFVLQVA GDSMTNYGPGKSYPHGCLIFVDPEVVAKNGECVIASLPNLHHAIFKVLVE DAGKRFLKSVNPLYPMIEITDGARLCGKVIGTFIPET >PFL_6161 sensory box-containing diguanylate cyclase, putative MTLNPDLSGPFVEPRVIRQHYAVEMAVERTRLLYQGSLLPTLFMLLNGLV CTWLLWSPARYLLLSVWMVWLLALVALRVIQVAAFDSAIPSRQAQPVWQR MFLLGSAVSGLTLACAGIALVPTDNFLQQAWVFGLIGAAILSASVAYAVS LQAFLSFTLPCLLPAIAYLFWGGDDQQRGWGWLGLILLVSLSVVAWQVNR LMQRGLLRRFQNQALIEHLQNAQGRSDQLNRELAREVEQRRRAEEQLREA QTGLEQRVAQRSLELDAANQALSKSEARLALALNASELGLWDWNLQTDEV HHTQIKELFGLEPEDVTAMLSHLKPRLHPEDLPLLKRALVEHLKGRSDDY QVEYRVRHGAGHWVWIEDRGRAVERSPSGRVLRMAGTRRDISADKELEVQ RNLAATVFEAASEGIVILDPDYALIAANQAFSQVTGYQIEDMLGRNVVEL SCSRDARRHYPLIHQALEQYGSWQGELVETRKNGELYPQWLQLNVVRDKR GKVRHIVGFFADLSARRESEERMRYLTHYDELTGLANRSLFRERLREAHQ RVRQGGRSLALLHINLDRFKLLNDSLGHEVADQLLQKMARRLVNALPEAD TIARLSGDEFAVLFDAYGSLSSLTRVATRLLSKLRLPITVEGHELVVSAS MGISMLPDSAREIAALISQANMAMAHAKHLGGNNFQFYTESLQASTLERL QLENQLRKAIEEGQLTVFYQPKLCLASGRLNAAEALVRWDHPVMGRVPPG DFIGLAEETGLIGPIGEFVLRQACRQACEWQRQGLEPIRVSVNLSVYQLR QGKLVSLVRQVLEETGLEPHFLELELTESQLLDSVEHIIATFQQLRGLGV KLAIDDFGTGYSSLSYLKRIPVDYVKIDQAFIRGLAEGGEDAAITRAIIA MAHGLSLKVVAEGVEDPAQLAFLKAEHCDEVQGYLISRPVAAEGLALLLQ AQSR >PFL_2458 GGDEF domain protein MPKRMDFSELHWLLAVVQSIDVGIVVLDLECRVQVWNSFMENRSGVPSKQ AIDQSFFELFPEVERPWFTRKVGRVVALGTPAFTIWKQRPYLVHFNNYQP ITGQGEFMYQNTTLLPLRSSNSEIHHVCLVIYDLTDVAINSLALQKANQQ LQHLSRTDHLTQLYNRGHWEQRLQFEYSRHGSSIALLMLDIDHFKSINDR HGHQAGDAVIKRVSELIHQHVRDSDVAGRYGGEEFAILLPHTDLAGARTL AERLRQSVEEQEVIHNGQAIAFTISLGIACLDRPARDHRCLIEWADQALY ASKRAGRNRVSTYAP >PFL_1738 sensor histidine kinase/response regulator MTLRRRWDIQTRTQLISLGPALLLTLLLISFFTFVRIQDLRQELNHTGQL IANQLAPATEYGVISGNNEGLESLLQATLATPHVHFLEVQDSANNILVYV EQPSASHNHAQQIKVFQAPVRLQRIQVHNDFLQNDPASMAAQGDGYLGRV IVGMSNDAFSQRQQEILLKAAILALFALLFTFLLARRLAAGLAQPIRAMG DAVKAIQEGDFKTPLPIVDDGELGNLARHINNLAAGLELASREQHQAMSQ LIQTREEAERANKAKSDFLAMMSHELRTPMNGVLGMLQLLETTQMTQEQS EYAALASESTEHLLKVINDILDFSRIERSALELEHIPFNLAELITSSAQA FQHSALQRGLDLQLRLPPGMESLQVKGDPTRIRQILVNLIGNALKFTEQG SITIEPQWQALDHELLWFTCAVRDSGIGISPASLELMFDAFQQADSSISR RYGGTGLGLPIARTLAERMGGTLRAQSEEGRGSVFTLEIPLALFQQSLPV LAPRVSSNQHSGEGRNVLLVEDNPVNQTVIQAMLRSLGFTVSIVTDGAQA VRSAESLIFEAILMDCRLPLVDGYEATRQIRQLPGCADLPIIALTANALQ GDREACLAAGMNDYLAKPFKRADLQQILQRWVQ >PFL_0146 sigma factor regulatory protein, FecR/PupR family MKPHQAPIAPSVVEQASEWLMLHWGGELSAQQRSAFDAWQQADPEHQRAW QRLQQLQQTLQGVPEHSTHVLLAKAPDQQRRAALKLLGLLLVAGGSGYLV QDSQPWRAAFAGQRSATGEIRHLTLSDGSRLDLNSASAVDLLFSASERRI RLIQGEILLTSGHDPSRPLIVETPAGDIQALGTRFAVRELDGGTRVDLYE GALRISPRHAQALQLNAGERLWFDAGRVSARQVAQVNASSWSEGRLIAER QPLGQFVAELSRYRPGVLRCDEQVAGLLLTGVFPLADSDAVLAALERSLP VRAHAVTRYWVTLKPRG >PFL_4400 conserved hypothetical protein MSSGIRKRNSTRKYILRLIYRVLLLIAVLIGIVLAVVLYYVANPKLPDYV PVEQVHYLDQWDAKDRQTYYFTPQGTQVKGLRYEWFSALELPFSEQPFAA PEYLARFGFLVEPGQKATAQNPGNLPVGFARHQNPGSAEQYLDITCAACH TGELRFNHQALRIDGGSAQHVLPSSVPTLRGGSFGQALVASLTSTYYNPW KFERFARKVLGADYEARHEQLRKDFKVSLDNFLRVAWNDTHRGLYPTEEG PGRTDAFGRIANASFGDAISPENYRIANAPVDYPQLWDIWTFDWVQWNGS AQQPMARNIGEALGVGATLNLFDANGQPLTGEARYPSSVRVRDLNLIEET LQRLKPPAWPEALLGTIDKPLAAKGRELFASNCAGCHVPSVSDNNGRPVQ QLKMLPVAVIGTDPNSASNIADLRYDLSSLQWDTAELARSNVELHPTPSE PLDLRQLSAAKGLAYITAFVEERAYRDAKVTPEERPRLDGYGLPIGVREL RAYKARPLAGVWATPPYLHNGSVPNLYQLLSPQSERSTTFSRGTFEYDPK HLGYRPEAFKNGFEFDTRISGNHNSGHEFRAGQRGNGVIGPLLQPEERWA LLEYLKVLGGPLESQLP >PFL_3636 response regulator/EAL domain protein MLKPLRVLVLDDHPIHCLQARHLLQAAGFGRVDSALDARQALAMLHRQVY DLVLVDLHMPEMDGVQFIHALTGVDQVPILAIVSSCSRRLMNSVSLMAKE KGLAVLGTFPKPLEAIHVEQISAIIGNSQDPVLAARPEHEAVFDRQVLER AIERRELKARFQPRRSLSTGRIVGAEALVRWNSPSFGLLMPDSFLASISR CQLDHALLLLMLDDALQAQQHWQRLGHRLSVSVNLPTGLLDDPGLPDQLQ QITLASGLATSDICFELLETERPLSPGQYHMGASRLRLKGFGLAQDDFGM GYSSMYSLISTPFTEMKIDRHFVHGAAADDARAAALVAAVQLGRQLGLEV VAEGVESARDLEFLRQIGCDSAQGYLISAALELDAFTQLLGCTVTPPFSS PTRPASSLPCQTSRYAASRKTSDD >PFL_2979 conserved hypothetical protein MVWGPSVSGAESRSFDLYIAEAPPLSMLEQTGLHGIVGDATLEAATRAGY TLHFIEVPWARAQQSVRKGVDKLIIPLSRTPEREADYTWIAPIMTMDRAF FSLHTRVETLQQARETFARIAVGRGSAQEQKLRAEGFGDNQIYPFEIGEN PAQLLLMGRVDAWFNGIPETQSIWRKVSTQPLQVSPVFMSTDLYLACSRN CNATLVRKLRAAVEGLRKDGTLERMRKSYLDAP >PFL_5653 conserved hypothetical protein MSIFSHFQQRFESTRQEEFSLQEYLELCKKDRSAYASAAERLLLAIGEPE LLDTSTNSRLSRIFSNKVIRRYPAFEDFHGMEECIDQIVSYFRHAAQGLE EKKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNA TEDGAILEEDFGIPRRYLNTIMSPWATKRLSEFGGDISQFRVVKLYPSIL NQIAVAKTEPGDENNQDISALVGKVDIRKLEEFPQNDADAYSYSGALCRA NQGLMEFVEMFKAPIKVLHPLLTATQEGNYNSTEGLGAIPFTGILLAHSN ESEWHTFRNNKNNEAFIDRIYIVKVPYCLRVTDEVKIYDKLLFNSSLAKA HCAPDTLKMLAQFTVLSRLKEPENSNIYSKMRVYDGENLKDTDPKAKSIQ EYRDSAGVDEGMNGLSTRFAFKILSKVFNFDPHEVAANPVHLLYVLEQQI EQEQFQAETRERYLRFLKEYLAPRYIEFIGKEIQTAYLESYSEYGQNIFD RYVLYADFWIQDQEYRDPETGEILNRVALNEELEKIEKPAGISNPKDFRN EIVNFVLRARANNNGKNPTWLSYEKLRVVIEKKMFSNTEDLLPVISFNAK ASKEDQQKHNDFVTRMVERGYTDKQVRLLSEWYLRVRKSQ >PFL_3537 sensory box histidine kinase/response regulator MPDLPEPYHPLTDDRFRLLVDAVVDYAIYMLDAQGRVASWNSGARRFKGY REEEVLGRHFSCFYTPEDRQAGLPQRALDSAAQCGRFEGEGWRLRKDGTR FWCHVVIDPIRDSAGGLIGFAKVTRDMTEQRAAEQILKQSEQQFRLLVQS VTDYAIYMLDAQGRVSSWNLGAQRIKGYAPEEVIGQHFSLFYTAEDRASD EPRKALEAAAREGRFEKQGWRLRKDGTRFLAHVIVDPIRADSGAIIGFAK ITRDITEVVQAQKELEVAREALFQSQKLQAIGQLSGGIAHDFNNLLTVIR GNLELLHKRVGDDPRLRRLLDNALQGTERGVTLTQRMLAFARRQELKSQA LDLGQLVASLSGLLCSSVGPRIALRVEMAPDLPAVQADLNQLELALLNLV SNARDAMPEGGSILIEAQLRGATGNLARGQYVCLAVVDDGQGMDEQTLAC AADPFFTTKGLGKGTGLGLSMVHGLAEQLGGRLVLQSRLGQGTRAELWLP LASAAKGSPGSEAMPAPGPDHPPLCVLLVDDDSLVLDSTTLLLEDLGHRV IRAASGAQALQCLEQHRDIQLMISDMAMPHMDGRQLAEAVRRLHPQLPII LASGYAQRQDGPVPELPRIFKPFSQAQLRDALAQVLAQSAAG >PFL_1781 protein-tyrosine-phosphatase MRVLFVCLGNICRSPTAEGVLRRKLHEAGLGDQVQVASAGTSDWHVGKAP DKRSQQAALRRGYDLSAQRAQQVGSADVAAYDLIFAMDQSNLRNLKALQP ARGKAELDLFLRRYEAALDEVPDPYYDGEQGFEQVLDLIEDACDRLVVEL KGRL >PFL_2226 sensory box histidine kinase/response regulator MARPSDEQQRALAGLLGLGNHSARKSHYPELAARLEDLETERNRYKWLFE NAVHGIFQASLQAGMRAANPALARMLGYQDPQEVLFSLADLAGNLFVGGA GELAAIGEQLQNQRSLLGYETQLRRKDGSSIDVLMNLLLKPDQDGLVEGF VADITERKLAQQHLEQLNDQLEQRVAARTDELLDANRNLQQQIARRERIE RDLREARDAAEAANRSKDKYLAAASHDLLQPLNAARLLISTLRERSLPAP EQLLVERTHQALEGAEDLLTDLLDISRLDQAAVKPDLATYRLDEMLAPLV SEFQSVAEAAGLGLRVRFGDFALFTDLRLMTRILRNFLSNACRYTERGSI LLAARRRGDQLRLEVWDTGRGIAADRLESIFLEFNQLDVGRAADRKGVGL GLAIVERIAKILGYRVQVASRPGHGSRFSIEVPLAAQVPLPLSQQAPQPG TGNPLPGRRLLVLDNELSILESMAALLGQWGCEVLTATDQAAALEVLQGR APELILADFHLDHGVTGCQVVRRLREHFQQPLPAVIITADRSDQCRRALQ QLGAPLLNKPVKPGKLRAVLSQLLG >PFL_3251 sensor histidine kinase/response regulator MIRPSSVDEQSFRKLLTRNISLPLGVGVLSAIFFVSLITYLLSVIQWVQH TDRVINNLNESARLTIDLETGMRGFLITGDEHFLDPYEVAKPRIVSELRS LQELVADNPQQVDRLKRLEALQVEWNNFAQGMIDLRRQSGDYRGAVQAGR GKRLTDEIRKEYDDAVAMEQQLRLERNENVTRTTIFSVVLYLLFVVGISA LLAYIGRRDLLALSKSYSDNLEAQEKSARRLEQQAWLRNGQTELAEQMLG QLSLNLLGRNILQFCAQYLGTPVAALYVREEHGGLRRVASYGFSREQEAQ EQSLYSDEGLVGQAAQHKRLIRLDEVPADYFKVSSGLGDGSPRSVLVVPT RDDDRVNGVIELGFLRALSERDVELLELIAGNIGTSIEAARYRQRLQEVL AETQQLNEELQVQQEELKTANEELEEQSRILKESQVHLETQQVELEQTNE QLAEQAQILADQRDAMDRKNNELNEAQTQLEERAEELQRSSKYKSEFLAN MSHELRTPLNSSLILAKLLAENPQENLSPEQVKFAESIYSAGNDLLNLIN DILDISKVEAGKLEVRPENASVPRLVDGLRSLFQPLTQDKGLEFKVELQP GAPQMLFTDRQRVEQILKNLLSNAVKFTEKGQVSLTVSAQPGAGIAFAVQ DSGIGIAQDQQQSIFEAFRQADGTTNRRYGGTGLGLSISRDLATLLGGSI SVSSEPGRGSIFTLVLPEQYQEAAEPLVAPPAPVAPVVAPQPASLPQPVA EAPGADIPRFADDRDKAPFSSRCILVVEDEANFAHILFDLAHELGYHCLV AHGADEGYSLAAQFIPDAILLDMRLPDHSGLTVLQRLKENAQTRHIPVHV ISVEDRVEAAMHMGAVGYAVKPTTREELKDVFARLEAKLTQKVKRVLLVE DDDLQRDSIARLIGDDDIEITAVGLAQEALDLLRENVYDCMVIDLKLPDM LGNDLLKRMSTEDICSFPPVIVYTGRNLTRDEEAELRKYSRSIIIKGARS PERLLDEVTLFLHKVESQLSHERQKMLKTARSRDKVFEGRKILLVDDDVR NIFALTSALEHKGAVVVIGRNGHEAIARLNEVEDIDLVLMDVMMPEMDGF EATVQIRKDPRWRKLPIIAVTAKAMKDDQERCLQAGSNDYLAKPIDLDRL FSLIRVWLPKMERI >PFL_0339 conserved hypothetical protein MPAILQGPALLSRFQALDRFLLEHQALWRPRPFNHLQLPWETAHPELAQW LRQRSLEDAEAAHNHPEQLQAPAPFTPLAEQARALGAVGELPIKALPAPH PRLNVDVPGRKWQQIEAFAACLQFDRTPTHWLDWCSGKGHLGRRLLQPEQ QLTCLEYDPALIESGEQLSRHHGLPARHLQQDVLADDTALRLHAEHSPVA LHACGDLHVRLIQLASQQGCPQLAIAPCCYNRTRASHYQGLSTAAQASPL DLSLEDLALPMSETVTAGARVRRQRDTSMARRLAFDLLQRQVRGLDEYLP TPSLPSHWLDKPFADYCRDLAALKDLSTVDCQDWAALEAAGWQRLAQVRN LELLRGLFRRPLELWLVLDRGLFLQEQGYAVRLGTFCEAPLTPRNLLLLA ERP >PFL_5054 GGDEF domain protein MNVSSATPRTGKIASNTERLLILSSSLIVVAILGIVTYLLIREHAAAEQA ATRAANNIVQLIDADVLRNVELYDLSLKGLISAAQRDDLKDVSASIRHLA LFDRATAAPYKGDILLLDRHGDVLADSASVVPRTGNYADREYFRSHIDNP DPRMMISPPFRARTADHDWRISFSRRLSDEHGQFIGVAEAAMRLSYFNEL FRNLDIGRNGTINLVSRDGVLLAQQPPLADDLIGKNFSSRPNFVRILREG NGSFSSVSSVDQKQRLYTFSQVGDLPLIVIVALSIDEVFGAWQRTAVLIS GATGALCIALFWLTWQLCRELRRRQSAEQELARLAAVDALTGLANRRTLD QVLGNEWSRARRANLPLSLLMVDVDHFKSFNDRFGHPLGDQALRAVAQSI GACVGRPSDLAARYGGEEFAVILPGTDSAGAAVLAEKIRTSIAALPAISE HAAPLTVSIGINTWSGNADIGLEQWVSDADKALYQAKYSGRNRVVSNMSQ GGSKRGA >PFL_3853 sensor histidine kinase MNSVRTRILLPVLVLVLLGDLLISWLVLRDSHHEIEEVYDAQLAQSARLL QGVLRQRDPAQKPDAADWERLHQAFDQAMSRVGVAGAAHPYETRLTFQVW RDDGQLLMRSAEAPLLEAPPTTLGAHDILENGKDWCAFLLADPQQGLLIW VGERDDIRQDLIQRIVRHTLWPTLIGVPLLALLIWLTIGWGLAPLRAMAR AIRGRSSDTLQPLGLKPLPQDLEPMQTALNQLLAQIDSLLERERRFIADA AHELRTPLAILRIHAQNAQSASSPEQRREALDFLVSGVDRATRIGSQLLT MARIEPQLNSPRLSRIDLSALVREELAELTPLALEKDVELVLEGDEGCLI ATDPVALAIALQNLVTNALNFAPAGSEVRVGLRPQADGAMHLCVEDAGPG IDEQQRERLLERFYSQGNANGAGLGLAIVQMIVSKIGGRLELRNRPEGGL CALLLLRPAL >PFL_6175 conserved hypothetical protein MRPVLPTLLSGLLLLAGHASAAVPSTLATCTRSATLLACVDPQGNAYSVA TAGSTTYLRGFEVIGKRYWAQTNSRYGQLTFFTGLASDGEAWVGYSQRVG WTTRNRFSSSGGSRGQFTCSRISGC >PFL_1821 conserved hypothetical protein MDLRRMSGWPVLLGLTLLPSLSMAAGKCERLVVTGSPDAPPYLWRDPQDP KHLMGASADLLQQVAGELGLKVEVLYAGKRSEALDEVRTGRMDLLADAPL TLNELESLDYIHPALVQNDYLVWTRKDSTLSYTQPGDLAGHPGAVSEKAR LTQPFVAMAKEHLQLKRLPNLTQVFQTLLLGEVDYVLAPRYAGMAMAQTL GMTADLAAFPQPIDKPGLFLALSHNSACNDPWLRGQLAKKMTELPASGLT ETLLQRNLERWKAQLQQPVSSPKQ >PFL_5686 GGDEF domain protein MPRSFAVRFSHFVPSLLLLLAGLAAAYVKDLNVFFTSLFNVLPTLVLLLG GAYCAVYRRQRELFLMVTVYIAYFLLDTQTDYYRDNGRVREDAAVVFHLC CLLLPLLFGLFAAWQERTHLFQDMVARFAVLLAFGSVALGLEQSYPQALL NWLAEIRWPALHGSWMSLIQLSYPVFFAAFLLLAIQYWRSPRPLHAAQLV GLLGLFWMLPKTFILPFTLNIMCSQVMLMIAAAVAHEAYQMAFRDELTGL PGRRALNERMQRLGRNYVLAMTDVDHFKKFNDTHGHDVGDQVLRLVASKL SKVTGGGRAYRYGGEEFAVVFAGKTMDECMPHLEMIREIIATYNIQLRNQ DNRPQDDQQGRQRRGVAAASSVSVTISIGVAERLAEHRTPEEVLKAADQA LYSAKGAGRNCVIAFGQNRRGAVRMDTAAG >PFL_5640 DNA-binding response regulator, LuxR family MIRVLVAEDHTIVREGIKQLIGLAKDLVVVGEASNGEQLLETLRQVPCEV VLLDISMPGVNGLEAIPRIRALSNPPAILVLSMHDEAQMAARALKIGAAG YATKDSDPSLLLTAIRKVASGGRYIDPDLADRMVFEVGLTDTRPLHSLLS EREFSVFERLAQGANVNDIAQQLALSSKTISTHKARLMQKLNITSLAELV KYAMEHKLL >PFL_1676 chemotaxis protein cheW MNKSSSAQGSEDPILQWVTFKLDNESYGINVMRVQEVLRYTEIAPVPGAP SYVLGIINLRGNVVTVIDTRQRFGLVPTEVNDNTRIVIIEADKQVVGIMV DSVAEVVYLRQSEVETAPNVGNEESAKFIQGVCNKNGELLILVELDKMMS EEEWSELESI >PFL_2218 periplasmic binding protein, putative MGRFALFLAGLLLCCATAQAEVRNYDTMIASGELKVAVYQDFAPYSFEDQ GQPRGVDVELAQALAEALGVRLQLIWAPPGEKLDDDLRDYIWRGSPLRHQ QLADLMMRVPYDHDYAQKRNELGELANDHVVMFGPYQEERWQVAFDRRRL DSVASVAVFQEHPIGVEVDSVPSFYLTSVFNGMLSAKTHHYPSVQQAFGA LRAGQVDAVMAMRGEIDWQLHQAADPQLALAENAYPNMGKQVWEIGMAVH ESNRQLAYAVEEALEGLIRDGRLQALYARYGLRYEVPQMYQ >PFL_1425 GAF domain/GGDEF domain/EAL domain protein MPDKALAEEQRLAALYALELLDTARCERFDRICRLAAEYFKVPTALITLV DRDRQWFKSRVGFAPEQTPIEQSFCAYTIKSGDVFEVENARQDVRFHANP LVTQDPGIGFYAGAPLITSTGHAIGSLCVIDRQPQRLNAAERQQLRDLAS LVMEQVEQRQRLTRRDPVSRLPNREQFQSDLYDLADENPGERRVLVLVDA VDMTVAHELTLAMGLAPFETIVRFLAQQLLAYLGRHVRVYHVSVKRFGFL LPAAPGIERFLESLVRRLRRQPPGLELPMIPGVCAGTVEFSTDRDAVPDV LRKAMFALELATLNRSTWAPYDVVRDQAYRRAFNLASDISEALDSGQIYL MFQPRFALPDGAQVSAEALIRWDHPWLGPISPAEFIPVMERNALIHRVTH WVINAVLGKLQAWSDGEVQRLSINLSPQDFEDQDIADVLKAACRRHGIEP HRLEVEITEGAWLRSNPRVLDQLSKIRALGMDVAIDDFGTGYSNFAYLHQ IPANVVKLDKSMVTDLESSAQHQKITRSVIALARELGYRTVAEGIESFKC LQMLRTFGCDEAQGYFLARPMVQEKFLARSAAQRFPLQQGY >PFL_3824 sensory box histidine kinase/response regulator MNLLSARRWADLPLRGKALVVISLPLVILLLSLVLIYSTERQTARAEEDV RRVLLVQGDIQAVHTLLAEAAASVRGYLLTRREDFLPAYLQARPQIEAAL QRLDQNVQDPRMRDYLQTITPLIRTKLDGLVALRNGSRDDAATVTAILID NKQVLDVLREQISAMRVREDALLAERSAAAAATRMRLLFATLLAAGCGLF GAIVAVLLLSRGIVTRVQQVQGNAQRLALGQPLRPQAPEQDEIGQLGTRL VEAGQLLAERERALRDNEERLRLIIDGVKDYGIFALDTAGRVTTWNVGAE RIKGYSEQEIIGRHFSLFYLPEECPQHPDMALREATAHGHYMEEAWRCRK DGSRFWASVVITAQYDASGALRGFSKITRDITDRRAAEIALGTAREEAES ASRAKSEFLSRMSHELRTPLNAILGFAQLLDMDSNAGQRPQVGHILRAGQ HLLGLINEVLDIARIEAGRLPLNVEPMALAAVLHEALTLVSPMAADAGIT LAPLPELAADSGVIADRQRLIQVLLNLLSNAIKYNRAGGRVSIDVAIEAS RLRLSVLDTGAGITAERLERLFKPFERLDADPRVEGTGLGLALSRSLLEM MDGSLGVQSTPGSGSCFTLELPFVRLAAAAAVAPCNAPALNVPAPQPASR YQGKVLCIEDNLQSLALIETLLQRRPGIRLLSSMQGQMGLDLARQHAPQM ILLDVSLPDLPGLEVLQRLRASSATADTPILMITADASEPTRRALLDAGA TAILTKPIHIPVFFAHLDACLPELP >PFL_4619 sensor histidine kinase MPRSLLGRMLLLTLLAVLFAQALSSVIWVSQLRATQLEGLVTSARSLAHS MTASVSYLRSLPVAYRPLVLDQLRSMGGTRFVVTLNDKPLGMQVLPATPR KEAVLQAVEQVLRQSLGNDADISVTFVSPDDLRIFNGGLKLDELPRSWAH YALTLEPVNPPVLVTQIQMAPGEWLYIASLLPEPYTSLEEQGLPAQQVWF ILLTSGFLLLFIGLLVHWQSRPLKRLARAARDMSLGADVEPVAEGGGSEV VEVGRAFNSMRERISRYLTERSQLFSAISHDLRTPITRLRLRVELLEDEQ LQAKFGRDLDELELLVKGALQCVKDTDIHENIEPVDLNQVLDCLVEPYLA PNGNGRVTQQGRALASYPGKPLALKRCMGNLIDNALKYGQNAHLHIEDDD SGFVLHVDDEGPGVPEQRLEQVFEPHFRLAGQQQGYGLGLGIARNIAHSH GGEVSLQNLREGGLRVTLYLPRTFD >PFL_2454 response regulator MFLPWVKERGARFRVRIGPVLKTRRPCSVNEFIVKAPLITLVSGPVCSRL NPSGSVTLMNPATPVNPGAQSRLILVVEDEPTVLEFLCEILQDEGFATQA MDSADRAWEFLQEQAADVALLLTDITMPGTLNGASLSNLCGERWPQLPIV VMSGFETPESSGVRYPVSFIRKPWTIGQILDCVEGALKSAQG >PFL_0517 conserved hypothetical protein MRLSELKNSGRSPTLPLSLELADAAGPAQLQLLSLLRVLPGQRYVGAGVW RGRPVLAKLLVGSKAARHFQRELQGVRLLAEQGLTTPLLLADGLQEGEGG WLLFELLQGAQSLGDAWKQVEALPVLADEQAEVLAEALGAIGQLHAKGLW QSDLHLDNLLRHDNRLYLIDGAGICVEEAGKPLSRQKVLENLGVFFAQLP KSLEPFTEELLVHYLLSNAEHALPLEALQKQVNKVRGWRLRDFLNKVGRE CTLFSVQRGPFALRAIRREEEAAMLPVLEQADALLDQGHLYKTGGAASVG RVEVAGRPLVIKRYNIKGFAHWLKRFWRPSRAWHSWREGNRLAFLGIATP KPLALLERRFLWLRRSAYLVTEHLPGPDIIERFAPFVDSGQAPEPELLAL DQLFAELIKERISHGDFKGHNLFWQEGRWALIDLDSMCQHSSLSSFALAY ARDRARFMRNWPQDSNLYQVIDQRLPKTAQGTEA >PFL_2237 YaiC/YhcK/ArdA family protein MLPAQDTRGKGLSLARRLYRSRTLGLALGFFCVAAGMAPLQPAPWVWGFM LFNAFAWPHLAYQWARLARVPFRAEYRNLLVDSLLGGFWVGAMHFNPLPL ATTLGMMAMNNMALGGLRFFLAGSAAQVLGMGVALWLFGPAFVAQTTPEQ VYACLPMLTLYPLALGYICYQQAVTLGRHKRELLALSRTDSLTGLLNHGA WKDQLEIEFQRCKRQAHGGAIALIDIDHFKAINDTYGHVAGDVVLRQLSK LLRQNLRVSDQAGRYGGDEFCVILPDVPLAHAAELMEALRGRFGALGYEQ SPALQVSLSIGLAAFNPLHDDAMGWLNDADQALYAAKTCGRNNVTCHPPE QPSRRLLNSL >PFL_3637 sensor histidine kinase/response regulator MGGALFWGGQRIIRQEQERIAVDFQLLTRYMSEQQALLQRLAGEKRLQYK DADQDPAQLFHLMEQQEAVGATLFQGNPSSVETPFTLVCQDLAQCPHQSA AAAGLGRYLADLYSSFWVRSSFPASALLVVDAGAGSSFTVPTIGSRWPRL TTPLVLAGLHAVRASATSSDSDAIRWIRLKDFPQHMIAFTALHNLAPGSG LQSSGTYAACLTYRDRINVFTTPQRRHFYDKFWLQGRLDGLLLGDEPAPL ALHEGANVRSDGLLFRINDASGHWSGYYLLSYRALFLGHSWSLAAIFLLL LLSPLAARVYARWYQRRVIAPAQQAHAELVENHQFSRTLLETTPVALCVL SREDRRIVFANNLALKWFTTQVGQSLDASGLDPALLERIARAREPGEIEN FQSFDGRSFYIAFAPTRYRNQDVLICAFADLSARAQMEQQLTQAKQAADK ANGAKSVFLATMSHEIRTPLYGVLGSLELMGLTDLDREQRQLLERIQVSS GLLLQIISDILDITRIESGQLSLGDQLFDPRALVQRCTASFVDSARNKGL LLFSWVDPELPPALLGDPGRISQILTNLISNAVKFTHSGQVIVRARAEPG SQGRVLLSLQVADTGIGIGKEEQQQLFIPFYQIDAHSHTVHGAGLGLSIC AKLAALMGSQIHLTSELGLGSSFSMQLELPVASDPNAERQPDLGGARIYV QSPHHELTDNLCQWLQKWHAQATPVDATAPPPQGQGVLLRLFDDRPEASE ALPPGLLRIDLGGQQRTPGAGLAEAGDYYAIGRLLERTLGGAPDAPAEPE LPARDIATLAPLGLNVLVAEDNPINQATLSHQLQQLGCRNTLAADGAEAL DLWRIGDYDLLLTDVNMPRMNGYELTCILRAAGDDRPIIGITANAMCDEE ARCQACGMDAWLVKPVPLQTLRASLARLTSLAPEPPAEPAAAPGNAPVDG LPPNLRELFARTMGQDVEHLRQALDEEDYERIFQLLHRVRGSLAVAGQEA LILQVHDLGQSLRQSGLTATTRTHSLMLLHALQDISQLE >PFL_3611 sigma factor regulatory protein, FecR/PupR family MWQAAMDWLLQCHSAPDDALLQQAHARWLAADERHAVAWRKAEKVWLLSG GLAPLEPPVPQPLPTPLRARRNRPRRALKALALAACLLLLAGPTPPTAHT SPAGEHRQVLLSDGSRIELGSDSAIRVDFEPGTRAVTLLRGQAFFEVSHD ASRPFTVQAADVKVRVIGTAFDVDLSRTAVVVAVQSGAVQVRDGRGELAV PALGPGDSLRLGLDQGPPQRGRLLPGQVAPWRQWQLLVNDRPLSEVVEAL QDYYPGVLLLTDPALGERRITASLNLRSPVSALQLAIAPLGGHLRQWGPY LTLIRKEPQVPAKQ >PFL_4626 sigma factor regulatory protein, FecR/PupR family MTDFHSAEPPTPAGPHSSTLAMDQALDWLIELEHPNEEQVRQFHQWLAAS PLNAQAFEKAQAIWNGPQVAQCALTLAAPPKVSRLARLRPHWKPLATAAV LLLGLFSFSNLPLRLQADHLTQVGERQRLQLEDGSKVLLNTNSAFSSDIN DHQRVARLYQGEAFFEIPGNRGLPLELDAGPVKASVRDTTFAVRYLDGVA QVQVQRGDIDLRATHADQRLRLRAGESVRVGPQGFDQPARLDADKELAWV QGRLVFENCPLSQVLAELRRYYPGWIVNNNEHLAKVAVTGNYRLDQPLDV VRSLAHITSARLSEFPALVILN >PFL_3825 response regulator MTADLRILIIDDQRPNLDLMEQLLAREGLHNVLSSTQPLRSLELFNSFEP DLVILDLHMPEFDGFAVLEQLNRRIPANDYLPILVLTADATRDTRLRALA LGARDFISKPLDALETLLRIWNLLETRALYKTLRTLVPPERIELLRPPRT >PFL_4691 ultraviolet light resistance protein A MYSIWKSCVMSFSILGPIAEGGRKLPLCLFRVPAGFPSPAADHIEQQISL DQVLNIRAPHVYLVSISGESMQGAGIFDGDLAIVDRSIEAMHGHIVIALL NNDPVCKRVCLRGKDIVLLSENPKYPPRYVLEGDELTIWGVVTSSVRSHV >PFL_1506 cyclic nucleotide-binding protein MQQTQEKDRDPMSEPTLLNNEIRDWLMDCGLFDQLLPADFNAAAGYFSIS SIAEGEAIFHEGDAGSFMCIIHSGQVAVQKRNHDGQPLTIATLRSGRAFG EMAVLDGERRSATCVAASHCQLLNLGKDSLEKMLNDAPKIAAKIIRALAV SLSKRLRMADGQLLAQQI >PFL_3148 heavy metal sensor histidine kinase MTARPAAAASSLSMRLGLTVALMGAALVVLLATLAYLALNHELDNLARKG LDSKLEQIRHSLTSDLKSSDLAARPHSLLDLVMGHDNLQLSILGSDPLAE PLLIVGGMAQESLPEPLGNIGGDGYVDWRDSRGNPLLSALRQMSLRNGEQ VQVVLTLDRSNDQALLSAYLRSTVIALPLLLLLIGFGAWWLVQRGLLPLQ QFSRVAARVTTQDLTHRLKLQGLPRELAELGQGINVMLQRLDGGVQRLSQ FSDDLAHELRSPISNLMGKAQVTLSRERPPEEYKAVLEASIEELERVTRI VADMLFLAQVSQPASQARFARVSLGEEARRVIDLFALSAEEKQLQLQPSG DAWVLGDRLMIQRAISNLLSNAIRHSPPRGQISLRVEQTMEAVSLSVGNP GPGIAASHLPHLFERFYRVDSSRTRAEGGTGLGLAIVRSIMNLHQGRTEV SSIPELLTEFRLVFPRLDPAQHDL >PFL_1879 CHASE domain/sensory box-containing nucleotide cyclase, putative MPLHVVRPKILGFISEEVSAWLVAVLVLVAGGILTGLLAWSTYSLNKQQV RQRFQLLAGERYSRIEERFQDQEQRLDGLRRFFVNSDLVTRQDFDGYAKP LLRRTQAYAWAPLVSRAQRPGFEQSIRDQGLPGFSILQLNATGQMEPAGE HDDYAPVLYSQTQSPLGSPLGYDLLAQPLRRATLERARELNGLAVSPPLQ LVAVDQAYARGVLLAAPVRRAQDASGPQDRPYGYVLAIISLRQLVADGLP VPASDNLSVRILDLSTEGQHEVLYESNNPPISSSLTASRLLRLADRDYQV DIRPSAAFLHANHSALGSLVILGGMLSLLLSALLYVLVSQRQRALALVEQ RTEELRSSEQALRGTHSQLRCVLNAATQVAIIATDLRGVISTFNAGAEQM LGYSSSEAVGHLTLESLHLPEELESWAQSLTQRYGKAIPVSQAMLVEEGM AGGHEAREWTLVRRDGSHLQVNMLATPVLDDQGLWIGHLAICIDITERKR VHEALAARDRLLQRLSAHVPGGIYQFKLDADGHTSFPYASDGLREIYEIE PQLLQQDAEAAFERIHPEDVERVRESIRVSAQQLSPWREEYRVCLPQRGG RWMRGAASPESLRGGGVLWHGYISDISDLKRVEEELRALSVTDSLTGIHN RRYFQERLQAEMHRLERGGGVMAVIMLDIDHFKRINDQYGHGVGDQVLRG LCERIGRRLRRIDVFCRLGGEEFMVLCPDTSGQQALILAQELWHGVRSSP IGPVESVTASFGIASWRAGEGADELLLRADSAVYAAKQAGRDRVLMEQP >PFL_3596 GGDEF domain protein MFRTLEEQVFKQAAPAALKLEFAQHDFERLRSFCVLIYTASILIWLIFDL IVSFPGQQGFTAYSMVFLSILSFTTIILGFTRQGRHFQWVNLLFVLTITI GVRLVIEGLPIDQRPVWLILGASSMLYGASVMPLRRWSFVSAIFITWLVL NPFWRTSTTLQELKGLLVLVYALFLSALTLYSFITLRRARLHNYIMSKLL LDQAYLDTLTEIPNRRSFMARAGQRLQALPREHDHYLAMVDIDNFKKVND VYGHDIGDEVLKRIAADIKGVMRDFDYARLGGEEFAIYLADVPRADVEAL ATRLCQVVRDQPTRHPVTISMGLARVEPGETLNQALIKADQALYESKHGG KDRYTFHPAARPAPPT >PFL_2863 signaling repeat/GGDEF domain/EAL domain protein MLIGSYSSALVLISIFVAILASYTALDLTGRIATTTGRAAYLWMMGGALA MGVGVWSMHFIGMLAFSLPIDLGYDIQLTALSLLISILSCGFALWLVSQP RLPLWQLLFGALIMGSGISGMHYTGMAAMRMQPGIDYDPSLFGASLLIAF GASLAALWIAFRLRQNTPYVRLARTGAAIVMGFAIVGMHYTGMAAARFAD GSFCGALGNGLSGKGLDNLVLITTLAVLIIALLTSVLDARLEARTAVLAQ SLTEANKELTQLALHDTLTGLPNRILLADRIDQAMHRVTAHGGCFALMFI DLDGFKPVNDAFGHHMGDQLLREVAQRLREDLRSEDTLARIGGDEFVLLV QLAEPDDALRLAARQVGLVSRSFRVAEHDLQISASIGIAVYPGNGLSAQE LLMNADAAMYHAKGTGKNGYSFFDASMNSNARRQLQLLQDLRNALEHHQF RLHYQPKFDAANGLPVGAEALLRWEHPQHGLLLPDKFIELAEKTGLIIAI GEWVLNEACRQMREWYVQGYTDWRIAVNLSALQFCHAGLVRSVANALERY HLPANNLTLEITETTAMSDADVSMLVLQQLADMGVDLSIDDFGTGYSSLM YLKRLPANELKIDRGFVRDLEHDSDDAAIVSAIVALGQALGLRIVAEGVE TGVQQTFLTQLGCDSLQGYFLGHPLPPEGFMQGIHRGEEKA >PFL_4888 sigma-54 dependent DNA-binding response regulator MTHNLLVVDDEPKLCDLLSSALSQNGIQVFTAGNGLHALKVLEQEDIDLV ISDWRMPGMDGPQLLGEIKQRYPQLPVIVMTAYSTVKNAVQSMRNGAYDY IAKPFDIDELDITVSKALQFRDILKDNQRMRAELAEHQQIDSLVGDSPAF RRVLQAVDSVRESNATILLTGESGTGKEMVARAIHKHGNRADKPFVAVNC AAIPEGLLESEMFGHRKGAFTGAVADRVGRFQQADKGTLFLDEVGDMPLA LQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDL YYRLNVFPIPLPALRERVEDIALLARHFAHSLGATAGKRISGFSPEALQA MASYAWPGNIRELQNCVERATIVATGQVIEEKDLPGYLFGPQAQGTESSA AISVGPQVPSDLEAALAEVEKAYILAALQQSNGVQAAAAQLIGISERSFW YRLKKLGIQVDKIVR >PFL_0087 diguanylate cyclase, putative MSDDANRWKEKYLKSIEQQEKLERRWAARLDLLRRGLVRSTLAAEGTDRA VDQCMKEMREVVRTDDMDAGLAALLPRLEKAVLDSEQRRETRVEQMSSAL TALVSQLQSLPLPREVSRPLKAFAKQLDGRVGQAREIPLLLGELSSLQGK ALSQLETPAEPDRPSLLQRLFGSREASETPAPAEEAVATNPPLPAAAAEA HPQAEEAPAPEDGAREHYQTPTQALPEAVSAPAAPAPAQPEVQLEPEPGA QPVASDEPEVAAVPAPAPVVAFVPPVLVQEAPAEPVPAIEVEPQATISPV AEPQAPVDPGVVAASDSPPAPVAEAALNPDELVPLPTVSPAVLLDSLPLP AVMAEALAAIDPEQSEHDVLYALPDSPEPSYSSVAKHIEHTLLGLLDDLS LPERHRPQAEAMRDRLQHGLNWYELLPILDDLAVLMLAITDSGQHEFETY LKQLNERLEAFQSNLQAASDGHADSSSAARAMDSQIREQVDGLQSSVQEA ADLDDLKQVLESHLEGLLGTMDHHQKQRDEREREVAARLQSLAERVSSME QEAQGYREHLEEQRQKALIDPLTGLPNRAAWSERLEHEVGQWQQHGNSLL LAMLDLDHFKRINDNYGHLAGDKVLKIIANVLRKRLRGSDFIARFGGEEF VLLLPNTPWPVGVRIVEALRAAIEACPFHFKGEPVTITVSVGLSAFKAGD RSDLVIKRADQALYRAKDAGRNRVEAG >PFL_0200 DNA-binding heavy metal response regulator MRLLVVEDEAKTAHFLAKGLGESGFAVDVALNGLDGRYFIEQQEYDLIIL DVMLPGLNGWQLLQLVRQRGATPVLFLTARDAIEDRVRGLELGADDYLLK PFAFAELLARVRTLLRRGPLREAESFSIADLEIDVLRRRVSRGGQRIALT NKEFALLHLLASRQGEVLSRTLIASQVWNLNFDSDTNMVEVAVRRLRAKV DDPYMPKLIHTVRGVGYQLEAPDEAL >PFL_0008 DNA-binding response regulator MRVAILDDEPAELARVEQTLREIPGPGEQPWTLHSFERGEDLLRQLRRET FDLLILDWQVPDLSGLSLLRWTREHMDSPPAAIMLTSRDAESDIVQALNT GADDYLSKPFRPNELKARVNAVLRRHGLQRNHSEEVQSFNDLSFDDAELT VTRAGAPISLTEREYRLARCLFANLGRPLSREYLYERFWTHEEIVSSRPL DTHIYRLRNKLGLTADRGWQLLTIYGYGYRLESVASPEEQGS >PFL_4716 response regulator MKLNWETLLPNTGEVIVIEDDSTLRPLLSDILQEIGAKTAAFATADDALT YMLESSHPVPLVIVDYALPGQIQGVEFIAMVQEKWPSMGVILISGYLLEG ATIPHGVKYLQKPWSMEELIESVAEVLQPGKPLRKL >PFL_5050 DNA-binding heavy metal response regulator MRVLIIEDEEKTADYLHRGLTEQGYTVDLARDGVEGLHMALEGDYAVIVL DVMLPGLDGFGVLRALRARKQTPVIMLTARERVEDRIKGLRDGADDYLGK PFSFLELVARLQALTRRSGGHEPVQISIADLWIDLISRKASRAGSRLDLT AKEFSLLSVLARRQGEILSKTAIAEMVWDINFDSDANVVEVAIKRLRAKL DGPFEQKLLHTIRGMGYVLESRGAE >PFL_5125 methyl-accepting chemotaxis transducer MKFKSIQFSVAALAGAIVLSVVAALVLYALFSGARTQQMVQDRTQAQFEQ VIEQRLSGLAQTQVSQIQRELEAPLLIAGGLVRVNALMGTQDSQGHAGLS LSREQLIALIKENVTQNPKILGAYIGWEPGAIDHDDAAYVGTSVVGIDAA NGRFLPWWFRNEDGSLGLDKLADVNDRTLLSTGVRTSEYYLCSQDSLKPC AIDPAPYKVGDKVVMLASFIQPILLNGKFQGIVGADLSVNFIQDMLVGAN QKLYGGAGHMALIGGNGRLVAYTKDSSKFGEKVSDVLSSDALTKLSSLKR GEVTYDVDQANGTISLYLPFGIGQTDAHWTLMLQLPLSAVMADLDKLQGD LAEQRKADTFGMAMVGLVIAGLGLLVIWLVGHGIARPLRQMVAMLDDIAQ GEGDLTRRLTSDRADELGSIAKGFNTFLAKLQAMISQVVTSVQSVSDSSE HTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVARNATQAAQAASH ADQAASQGMQIVRDTSSAIGALAEEIGRAVGVVQTLAKDSENINAILIAI RGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATEEIQ SMIQQLQQGTREVVRVMEDSQHKTDQSVEHAAKAAQALETITQAVSVIND MNTQIASAAEEQSAVAEDINRNVINIGQVANEVAGGADESSAASAGLTKL AEQQRRLINQFKV >PFL_2143 transcriptional regulator, LuxR family MSLTSSIANLETPHFYFELGQLISSSGHPQFASEMLQLVDKLVPLTQLVL SEWTLDERQASPLAITLLGRAGLHKDLPLPEPPRRHDPLLQQMLEMDDSL LIQMNAQARSGPSRTTAHQCHLVSRKANRRCVIALYRAPDQGGFSLSELS FLKSLSQTLLPLLERHAQLHRQQALKNLRSWSAKPADALQQTPLQREFDE RLSLGDITLSAREKEVCLGLLTGGTVPEMAQRLSVKNSSVETYLKRAAAK LGVSGRHGLAKWMVGA >PFL_0126 sigma factor regulatory protein, FecR/PupR family MDNFPASLPLKPNPDHLVVKQAINWLLRLRNNGANPKLQQQCDLWRAAHQ EHELAWQRVQSLQQELTDNLRSVPGAQVALHTLEHSSQRLGRRQALKLLS GALLLGSSAWVGKDLLGWQQWNADFATAVGEQRGFQLPDGTRLELNTDSA ADLNFNAEQRLIKLRRGEIMVSCGADHGPARPLLVESRHALLEGFDARFV VRVEDRCTRLSVTHGSVAIHAPHTADGRSARVEAGQSYQISHGLAEPAAP LAMDVGAWADGLIVTRNMRLDDFLQEVGRYRHGYLGCSAAVGNLRLSGVF RLEDTDKLLAILPQTLPVQLRYRTRWWVTLGPVA >PFL_5221 DNA-binding heavy metal response regulator, putative MRILVIEDEPKTADYLHQGLTESGYVVDCANNGADGLHLTRQHAYDLVIL DINLPHIDGWGVLGQIRQDSSTRVMMLTAQGRLADKIRGLDLGADDYLVK PFQFPELLARVRTLMRRSEQAPVPDVLRVADLELDQGRHRAFRGKQRIDL TTKEFALLHLLMRQSGVVLSRTQIISFVWDMNFDCDTNVVEVSIRRLRAK IDDPFERKLIHTLRGVGYVLEERD >PFL_5800 periplasmic binding protein, putative MSVIARLLTTFLCTCLSLAAHGEKLRIVTEPWAPYVYEENGTAKGLDYET TAIVFQRLGIEVQWQFLPWKRCLAMLETGQADGALDIFHSDQRDGTLLYP NEPLSDVEFVMFYANQRPHPFKRLNELKGLTIGTSPGYLYSDDFSNSTLF NREPAPTHEANFGKLLLGRIDLLITDKRVGQHLLDSLGLRDQVSQNPTVI SRQSQYLAVRRNAGMDLLVQRFGAELKRFKREPAYAQLSAKYGAEPALPP VRSSSTRESEKTVEQQESSAH >PFL_2573 DNA-binding response regulator MTRILTIEDDAVTAREIVAELSSHGLDVDWVDNGREGLVRAVSGDYDLIT LDRMLPELDGLAIVTTLRTIGVSTPILMISALSDVDERVRGLRAGGDDYL TKPFASDEMAARVEVLLRRKNTVKDFDTSLRVADLELNLISREATRADQL LSLLPTEYKLLEFLMRNTGQILSRMMIFEEVWGYHFDPGTNLIDVHIGRL RKKIDPPGMTPLIRTVRGSGYVIAEPL >PFL_4287 methyl-accepting chemotaxis transducer MGAWLSNISLKYKFWAVNAVAFVTTLLLVLYAVQLEQQARSQTAQAAAQA EAKLLGAWPEGQALPSAEHLLYFSRGQTPSLNEQTLSELNGANGWVELNP MPLFGENPLLGADVIQRADGQQVAVLAYAPSLAQVFSDRFTNYAVAVFIL MFAMLCASQLLIRFLLSQLNTLKDVMLHVEKTGDLSARVPLSCKDEVGQM ASAFNAMQAGYQRVVNTVANTARQLDQGAARLASSMNDVRHGMLGQQSET DQAATAINEMSATVYHIAQHAGATRDLSQTADTLAGTGHEVVGRVQKSIA GLSNGVQQTAEMIQKLAEDSQKINGVVNVIHSIAEQTNLLALNAAIEAAR AGEMGRGFAVVADEVRNLAKRVQTSTDEITSMVSALQAGTRDAVDFMQES SFKADDCVQQAQEAGAALAEITGAVAQMRESNTQIAVAAEQQSQVAEEMN RAVVSIRDVTENTVQQTVASATTSSELATLAGELSKAIGQLKL >PFL_1105 sensory box histidine kinase/response regulator MIRRRTYRKLPVQRWLYGPVLVCAIFAWAAPAYAAQNLSFKLVPAFVDLD PLPLAPAEQRWLKSHRTLRVGISIDDYQPIDITRDRNRYQGISADYLSLV GERLGTSMEVLGFSEREQAVEALRNGTIDVLTSANGYERGAPGLRFTSDY MPDLAVVVVRRDEPQPSDDLAGKKVVLLDGYANAAQVHAAYPDSQIMLSP NLYSGLEAVKQGDADAFIGNEVIVRAYKALRPYLGLQIHVESRLPPTGFA FATRDSNVLLAQLLEKALQSIDESIRREIQARWTTGLGASNFAEPIELSA QEQAWILQHQHVVVASQQYPPHVFKDKEGQWTGLNIDLLNRISRMTGLHF VQKESQTTAQTLELLESGEAQMNTTLTASDDRRLFLNFSHAFGGAAWVFV VRPEDRRLSSLKQMAGEVLVLPARHTLESFIRRNYPDIRLRSVASYEEAR ALVSNGEAMATIQSEVQALGPAETGVMVGRSVEGTWSADEFSVRKDQPEL LSILNKALEALPVAELSALRLKWLGATPVPVPAWQRVPNWVYWAIATALL FGLISLAWNSRLKRQIQQRLLAEQRLNDQLVFKRALLDGIPNPIFVRDLQ GRLMTCNKSYEQQLGTSLAQIQGRQLTELDILPPATAQQLHGEFMQLLAS GESVFADRQVESRDGPIDVYQWAVPFYSAEGQLQGLLGGWIDITERKRLE NQLVEARQAADQANAAKTAFLSTMSHEIRTPMTAILGLLELEKEQARLRG VPFSEALRVAYQSAQELIGLMGDSLDLAKIEAGYMHLVPQVTALKPFFES IRQLFEVTARNQGVQLQLVFSERAKGRYLFDPARLRQVVHNLLSNALKFT AQGEVRMTVECQPDESGLECLRISVADTGRGISSEQQAKLFTPFVQADAM TSSAYGGTGLGLSICRQLVELMGGRIHLLSEPGVGTVVSLELYLERVSDD FESGPASTQERPPSRSMEVLVVDDLSANRMVLCQQLMFLGHRVVACDNAR EALQQWRGGTFDVVMTDCNMPDMSGYALAEAIRQAEAQEGRGRCPVIGCT ANAFEDERERCEEAGMDQLLVKPVTLDQLAQALARFLPPPSFNIQTLRSM TQADDQVLQRMLHELLRNLAEEQQALEAAHQARDRERLGGTLHRLKGVCC LIDALPLARACIELEGLVKGRQDEAIDRHWPLLLEVIASLRSDIQAVLDD >PFL_4715 GGDEF domain protein MPDPTSDVSFSEGDISTVDSLTAQQIVAEHKVKTAVRFLLTVCLILILVD LWQGWASRQYRLQDKEVAMANLAQTLSSQAHDSIKQADTVLFSLVDRIET EGMDADQLHLLKRLLSAQRNELSQLHGLFIYDQDGAWIVASNGILPPNAN NSDSEYFIYHRDRPDRGPHVGPSIKSRSTGEWVLPVSRRINNPDGSFAGV ALATIYLDHFLKLYNSIDIGNNGVINLISSEAKIVLRRPFNEAVIGTNVA EGPLFTQLLPKGPFGTATVTSYLDGVERVVGYRRVNDYPLIVFSAVNKEE VLASWRQETVMSTAIVFLLMTVLGGIGYRFIRLMKKQGRIQNELLGAQDK LMEVNRTLELLALEDALTGLANRRQFDLFTQTEMGRAKRGQRTLALLMID VDHFKRFNDRYGHLVGDECLRRISAIIRENIRRPGDLAARFGGEEFAVVL PATDYVGAFIVAEKIRKAVLRAEIEHKDSGIELVTVSIGVGACSPSVEDT LDGLIGAADEALYVAKTSGRNMSVIAN >PFL_4492 hypothetical protein MAHNSSAITGIELEQFMDRLEAQQQEQETDALLAQLQAQPLQADSLASID RLHTLWMQAGDSAAARAVIDQDGDALVQAAPEPARAELMMNLAILRLRVA NYLDDEPTLIEVLGQLEQMATQTLDFNVEHYRRYRIFDDLERASCEIALK TIEVRYALTLGNPARAALRAWDAADQYQRRARVLAHHDRNEEARSAALEA VNAVRTAGPDQDIDEGDWLWLGNSLIEIIPLRLALFEQPIAQLTAGRSLP QRREWEVRTARLAARALHAQGDLAGALNICNAAALSLDSDGGNNFIEYEL PWLMEAGRIDEAGFRAFIDVYDRQTELWPATARLVLDRLQDPDERSAWWP ICVMRACITEEVLQSFLQALPSIETSESATTPLLAALSLAMEDLQAGDAL YTEARAEAVRRAPDHPWITRLAAVHDAEHGLIDAATEASLLQNAIQAGRM QDNRSAFSLFAARINSQGIIEALKAPKPVLSCGKHAYNYALGIEDLAEAE ADKLPPDARDQAYSLLREAQRDAYEQGQAHMERYFASGSGHPYDACAHLY SMLCNNLAINYRYYNPIRYEDAIELHTRGIAASPFAEHYNGLLSARISLE DLPGIIDAAEQLWHYSAEFGYSRHNPDEYVASVAYALYKLDRDNEILIWL ERLLKWQEEQGVSDQQLDSSALFARIQVARYLAHAHPDNADSLWQRYQPA VLSLNEVSVMSASVDFLKARGRAAEAIDYCARTLALCAPDDDYDIRCRAR IEQILSELQAPAQPAGKKNWWQIWK >PFL_0229 sigma-54-binding protein MSAHTPFGQPLLTFPDAEKSPLSIRAKALVFVDPRSRQLREELEQLAPRS VSVLIRGETGTGKELLARHIHRASDRSGLFVSVNCGAISPTYADAELFGY AAGSFSGSASSRAGWFGSANGGTLYLDEIGDLPLPIQTKLLAALENHEVT RVGAQQPSPVDVRLVAATSIDLAQAVAAGKFHERLYRYLSEGQLELPALR ERVGDIESLAEYFLGIYSQRLDLPVPLISEAAQQALNRHSWPGNTRELEN VIHFALLVSSGEEILPEHLNLPPTPSPLEQIQQLLQQIAEIGSAVERQAL HQLLQRTALT >PFL_4014 sensor histidine kinase MRSIQRRLSLGLITVMVVVGLVLAQTSLWLFEVGLQRYLEAGLRNDSESL LLALVRGPQGLQLDERRLSPAYQRPFSGHYFRIDFADVHWRSRSLWDQEL PQLERAGLQGNLQLGPEGQQLLVLRSDYKRLGQSISISVAQDYTPVRESF QRMRQIGLGLGLAGLLLILLLQRLTVRRALRPLETAREQIAQLQQGQRSQ LDAQVPVELEPLVAQINHLLAHTEDSLNRSRNALGNLGHALKTPLAVLLS LASSPRLDGHPEVRRMLQEQLEQVQQRLNRELNRARLAGDALPGVLFECD AELPGLLATLNMIHGQHLELSYQAPPGLRLPWDREDLLELLGNLLDNACK WADAQVRLSVEERPQGFCLAVDDDGPGIPEARRDEVFGRGTRLDEQTHGH GLGLGIVRDIVDACGGTLNLGESEWGGLRVEIELPRR >PFL_3115 methyl-accepting chemotaxis protein MMNSLRKMSISQRLWLILIVAVLTLVTLGVMMLKQIHGDLYLAKAQKTQH VVQTAAGVLNYYQGLEAAGSLTREQAQKQALQVIRGLRYNQNDYFWINDL TPVMIMHPANPKLDGQNLAAVKDPDGFEVFNEMVTLAKAKGGGMVDYRWP KPGAEQPVQKTSYIQLFQPWGWIIGSGVYIDDLQDEFYAQVLRASSIGLV IALLMAALVVLIVRSIVSPLRETVHAMANIASGESDLTRSLDTHGQDEVT ELARHFNGFTAKLRGVVMQLQSSAAALEQSSSELGSNANDAQERSQQQSQ QMEQVAAAISQVTSAVQDVARNAEHAATEVREAEAQAQQGQVNIDGSLQQ IDQLSVTIDQAVEVIRTLAAESTQIGTVLEVIRSIAEQTNLLALNAAIEA ARAGEQGRGFAVVADEVRLLAQRTQQSTAEIQGMIERLQNHSEAAVKVIG DSSRASQLTIEQAGLAGASLNAIGQALRNLNGLNATIASATLEQAHVVED INHNVGQAAGLSQGTALAAQHSSAASRHLKELSEQLNGLLRQFRV >PFL_4920 DNA-binding response regulator, LuxR family MTCRIIVADDHPLFREGMLRTIQRLLPDAVLEEAGDLAAVMALAESGEEP DSLILDLRFPGLTSVSMIAGLRQQLPRTSIIVVSMVDNQDLIAEVMAAGA DGFIGKSISPDEIGQAIQAIREGDVVVKYAPSGLLLPLDACAEVSQLTTR QQEVLRLIAQGKTNKEIARELDISPFTVRIHVSSLLHTLKVPSRAAAAVK FTGTW >PFL_4241 GAF domain protein MIDLQSAGQGLDGYGLLCAQLESLLADERDFIANAAQFSAFLYSQLEDLN WAGFYLNRNQELVLGPFQGQIACVRIPFGRGVCGTAAATLQTQRVEDVHA FAGHIACDSASNSELVVPLVKDGRLIGVLDLDSPKLARFGVADQAGIEQL AAIFLRLSDC >PFL_4532 YaiC/YhcK/ArdA family protein MENQRGKGLSFARRIYRPRIIGLGIGGISVFATLYPLALPGWIWALLLFH GLLWPHLAYQLSTRSAFPYQAERRNLLYDSMLGGFWAATMQFNPLPAVTI LSMMAMNNVAAGGVRLFIRGALAQGIGVLLSWSLFGASFNTRISPLQIYA CLPMLTLYPLAVGMVCYRLAIKLSEHKRALSALSRTDSLTGLLNHGSWKD LLHIKFHKCQQQQIDASIALIDIDHFKAINDTYGHIIGDTVLRHLSNELR RNLRHDDLAGRYGGDEFCVILPRMDRQQALEVMERLRQVFSQYRHPQVAE LKVSLSIGLAAFDREFQDPSSWLNAADKALYLAKNSGRNRIASNDDEAHS RQTQMA >PFL_4490 sensor histidine kinase MIEKQQALDFSTVIASTVHDMKNSLAMLMQAHAQWLARLPEQQNAPEQGV IDYQFAHLNGMLVQLLGLYKLGINQLPLQPAYHELDDFIEAQLVSHQDVF KSRGISAAYEVDPLSPLGFFDRELIASVLANCINNSIRHARHALLISVSD EEGQVVLSINDDGEGYPQGMIERQADYVQGINQSSGSTGLGLYFAGRIAE LHQRNGVCGHTRISNGGPLGGGLFKLYLP >PFL_3379 Putative sugar diacid recognition family MFELDHDLAQDIVDRTMAILPYNVNVMDSQGLILGSGEPERINTRHEGAQ LVLANGRVVEIDEPTARQLKGVQPGINLPLLHDQRLIGVLGITGDPAQLR TYAELVRMTAEMLVGQRHQQAEQQWRRQRCDDLLALLLSDGGDSPRLVDE AQQMGLKPQLARTPYLFELAQEPASGQGVDSLSSWLLSRYPDSWCVSSSK SSLLWCRPASLSLDNPRLLEKLDGQGWNILRVAVGGQAEGLAGLRRCYRR VGDLLAYGRDILPDARLLTLNRYRLPVMLWRHRNDDALDELLTPLRKVLA KDSNGQLLATLRSWCDHDGQSQACADALGIHRNSLRYRMERIAELSGVDP LRLDGMLALYLGVQLLPHRSEPA >PFL_4011 methyl-accepting chemotaxis protein MRLSLKAKVLSLAVLPVLLFALVISLSTVLMLRQQAQKEVEETRNRLLTE AKATLQSYVEVALTTVKPLYDAAAQGDQAARAEVVKLLSNISYGKDGYFF GYDSETVRLFKGNSPDGVGKSFKDNRDPNGVYVNRELVRVGKDGSHYVQY SSTQPGSDVLVPKLGYTEYLPKWDMVLGTSVNLDGIDAQVAAVQSSVNQR MEGMVLSILGIAAVVLVVIAALGMLVANTMLRPLNLMKANLDDIAAGEGD LTRRLAITSQDELGQLAGSFNRFVDKIHGLVRQITEMTGQLTELVTQVSD QAQRSEQAMERQRHETDQVATAINEMSSAAHEVARSAQGAAVAAQQTDEE GQAAKRVVDGSIQQIHALVSDIRNSGTSLDSLQQDVTSIVSVLDVIRSIA EQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTQEIQGMID RLQQGTRVAVDAMRRSSDAGDGTSVKANEAGASLDTMAQLIGTINSMNAQ IASAAEEQTAVAEEINRSVHQIAVAVDSVADETQRGAQTSRSLADLGQRL GRLVGQFRI >PFL_3920 conserved domain protein MPPVSPSFSELKMERIQVHDCNANEELAQAPTCIARLGHPSGLPVMAGSL ETAQELDLLHKIDCTQIQDFLIFHAMSSDQFRQLLSHDGPANAYGLASGC >PFL_5779 response regulator/sensory box/GGDEF domain/EAL domain protein MECVQPEPAEGHSTLLIVDDYPENLLSMRALLQRQDWQVMTAASGVEALG LLLEHEVDLVLLDVQMPGMDGFEVARLMRGSQRTRLTPIIFLTANEQSQD AVIKGYASGAVDYLFKPFDPQILKPKVQALLEHQRNRRALQHLSHDLEVA RAFNASVLDNAAEGILVVDEGGCVRFANPAVSRLLNAQVKELEGSPFLDY LQKPHVPDWSGSELYACYRRGETYRLHDAQMRTVPGQLISVALSCAPLPS DQKAMVVTLLDMSEVRHLHQQLEYQAVTDPLTGLLNRRGFYQTVENILLR SDRSGKSLVLLYLDLDGFKRVNDSLGHDAGDRVLRWVSEQLKDCLHSFDI LGRMGGDEFTALLELSFPEQAAKIAEKLIERLSINQQIDGLEVVLGASIG IAIYPDCGSNLDGLLRAADIAMYEAKRAGRQQYRYYDHEMNGRARSRLML EESVRSAVERKEFTLVYQPQVAIADGRLRGFEALLRWRHPSVGDVPPGLF LPLLEEARLISRLGSWIYQQGAAQRKDWEQVFSPDLVLGVSLSATQFNMP NLVAELRQVLSRHGLQPRQLEVEVTEAALTQNLDDTRKQLQLLRQLGVRV ALDDFGSGSCCLAYLRDLQLDTLKLDRHLIARLLTSPRDAAIARCVIDLC KQFDLLVIAEGVETLEQYQWLKANGCEYVQGFLVARPLTASIASQFAQPF DWSALQA >PFL_5664 sensory box-containing diguanylate cyclase, putative MLLLALLTWTATAGALTLTDEERSWLKTHPELRLGVDASWPPFEYRDEEG RYQGLAADYIHLIQERLSVNLKPVEPASWTAVLEDAKQGKLDLLPGIMST PERQSYMAFTRPYLDFPIVILAHEGGAQPHNLKELYGLKIAVVENYAPHE LLRTHHPDLNLVAMPNVSSALQALATDEVDAVVGDLASSVWSLRQLKLDG LYVSGETPYRYQLAMGVPRENKVLVSILDKVLADLSPEEISTIQQHWVGS VLDHRTFWSDVLMYGLPGLLLLVTVLAVVIRINRRLSSEISRRVALEQEL RSSEYHYRSLVESLSAIAWEARISDFTYSYVSPHAEALLGYPLAHWLIPG FWRNIIHPADLTRAQAFCDHEVQAGRDHSLDYRVIAADGRCLWVRDIVSL IEHGHEPVMRGLMIDISETKHTEEALRLSEQKFASVFQQCPDILVIARLS DGCLLEVNKAFEEQIGLSAQSVVGQTATELNIWGIPGVGPGLLQRLQAGS IRNLEMPFRRHNGQLFTGLISAEPFDLDTTPALVVVVRDISQLKETQQQL QTSEEKFAKAFHASPDGLLLTRQRDGLLIEVNEGFSRITGFNSAMSLDRS TLDLGIWVNLNERKQMLDLLQRDGFVRDFNCHIRRNDGQIRLCELSSRPL PIGGDDCMLTIARDITDRRLMQEKLQQAATVFESTAEGVMITDTQQRISA VNRAFSEITGYSEREALGHTPRLLASGLHDSAFYAAMWHQLTLEGHWQGE ISNRRKNGELYPNWLTINAVRNRENQITHFVAVFADISSLKHAQARLDYQ AHHDPLTGLPNRTLFESRLLSALNSQQDNGSQGAVLFLDLDRFKHINDSL GHPVGDLLLKGIAVRLKEQLRDIDTVARLGGDEFIILLPGLHQASDADHI ATKLLNCFTAPFQAGEHEFFISASIGTSLYPKDGCDVATLIKNADAAMYR SKAKGRNRVERYTRDLTAQASERVALEHELRRAIERNELSLYFQPKISLS NHELVGAEALIRWHHPTFGDVPPEHFIPLAEENGMILLIGDWVLEQACLQ LNNWNRRFEDFGPLSVNLAGAQLRQPNLLGRIEQLLRDYDLQPGMLQLEI TENFIMSQAEEALEVLHQLKRLGVQLAIDDFGTGYSSLSYLKRLPLDFLK IDQSFVRGLPDDPHDVAIVRAIIALGRSMQFTVIAEGVENQEQQTFLTLE GCEQIQGYIVSLPLEAEEFCTTFLRIRVSDFSDSTAEKPSL >PFL_4013 methyl-accepting chemotaxis transducer MARELARTGLHSSPSASRFISNKRLKNAIGRPLQCKVSDIYRIKDVSMSL RQLSIQWKITLLAGLCLLGIVSLLVGLSLYRMEHSSELVKASSMEMLNEA AQARIEAQGEVQALGIRQQFMDAYQYGHGFSRQVLFLREQAEKRFLDAFD LREDLTRQVKSALQANPDLLGLSLVFEANALDGKDELFGGQSELGSNEKG RFALYWSQPTPGKLTSMSLPESDMSDTRTGPSGQPANAWFTCPRSTLKPC VIEPYFYDIDGQKVLMTSIVFPLMVDGKVIASLSVDINLNSLQAISQSAS KRLYAGQTNVSILSPVGLLAGYSPDASKLSQRLDSVDTTNGAELIRLLAN STQTQSLHSNRELKVLAPFTPIPGGKAWGVLLDVPEKVLVGPAEALKSEL DARNNSGTLIELGLGLLAAVVGLLLVWLMARSVTRPILGVAHMLEDIASG EGDLTRRLAYDKPDELGQLAGWFNRFLDKLQPIIAEVKRSVQDARGTADQ SSAIATQTSAGMEQQYRQVDQVATASHEMSATAQDVARSAAQAAQAARDA DQATRQGLNVIDHTTRSIDLLAADMSAAMTQVEGLAANSEQIGSVLEVIR SIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVEETRQ VIEQLQNGTREVVGSMNNSHRQAQGSVEQVGQAVTALRQIGDAVTVISDM NLQIASAAEQQSAVAEEINSNVATIRDVTESLSEQANESARVSQSLNSLA NQQQSLMDQFRV >PFL_3355 methyl-accepting chemotaxis protein MRRRLNGMDACRPFSLESRPMSLRNLNIAPRAFLGFAFIALLVVVLGVFA VNRMAVIREASMDMESNQLPSVGFLGNLTENVLRLRILSFRVLVNREPAG LAEAQTRIGVLVDNARKAQASYAALPAGPQEAALYKTFATTLDNYLQAQN EMLELSRQNKLDEMRSLINSRIKEGTDQMGEQLNQLIAINAADARSASKA AGEHYSSAIAGIVAVAVLAALLTIVLALLLTRSIVTPLNKALNAAQVIAG GNLRQAIEVDGKDEPARLLQALAEMQASLRRTIEQIAGSATQLASASEEL SAVTEEASRGLQQQNNEIEQAATAVNEMTAAVEEVARNAVSTSEASRQST QAAREGRDRVVETVDAIQTMTHDVQSTSVMIEGLATQGRDIGKVLDVIRA IAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTAQSTQEIEKM VAGIQNGTGDAVESMQQSNQRTQSTLELARAAGVALEQIAESINQINERN LVIASASEEQAQVSREVDRNLVNIRDLATQSAAGANQTSAASHELSRLAV DLNALVARFVI >PFL_2392 sigma factor regulatory protein, FecR/PupR family MTEHLSALPGDAIREQASYWFTQREAMTHNLPLRQRFEQWRNSHAQHAEA YRALEDLWQASAFEQALEQLALGLDLPAAPAPATPRRKRHRTRWLAAAAT VLVMLGAGWFGDLPLRLQADHLSAVGELQRFDLADGSHIVLGSDSAISSD FSNARRRIQLLRGELYVEAFHDPSRPLTIEAGSATVTVVGTRFSVSRQAD GVTVAVREGRVRLADENGQQSLLQAGNWQQLQGHRLLPLNPEGSERQLSW INGRLSFQDAPLAQVLQELGRYHRAPILLFNADAAQQKVSGNYQLDDPQA IVRALSKVTATELTRLPGGILVLR >PFL_4875 sensor histidine kinase MKCDPTLYRAAPPSLAVKPRLIRHLFLPPLVILLMIGLGYVGFWISEHNG IRTLGENGQRQLELHARAVESEISKYTYLPSLLELESSVSQLLGDPSPEH RQTVNQYLEGLNRRSRSRAIYVMDTTGRVVATSNWRDVDSYLGEDLSFRA YYQNAVRGQPGRFYGIGSTNGEPGYYLAHGLEEQGKIIGVAVVKVRLEAL EERWQRARLEAFVSDENGIIILSSDPARRLKSVRPLSDDTKERLARSLQY YWFPLNELEPLARERLAEGVEKLTFPANTELVSDEKAISYLSQTRPLSDT PWNFTLLTPLQDLRREAINQGILVAVAFALVAFLLIAWNERRKVIATRLA AREALQEANSQLERRITERTADLRASNERLKGQIRERRQAEETLRRAQDE LVQAGKLAAIGQMSTSIAHELNQPLAALRTLSGNTVRFLERGALDTASAN LKTINELIDRMGRITASLRSFARRGDDQGQASLDKAVDAALQVLNARLEP LPLQLHRDFTEQTLQIDQTRLEQILVNLIGNALDAMQAQPAPQLWLEGEL SEGKYRLRVRDNGHGIDLEARKHLFEPFFTTKPGEQGLGLGLTLSASLAA ATGGSLGVEHPASGGTAFVLSLPLASPTRAEPI >PFL_4803 sigma-54 dependent DNA-binding response regulator MLNSVIVVDDEASIRTAVEQWLSLSGFEVQLFSRAEDCLAQLPKNFPGVI LSDVRMPGISGLELLAQVQRLDPDLPIILLTGHGDVPMAVEAMRDGAYDF LEKPFSPDTLLSSLRRALDKRRLVLENRRLHQQADSRAKLDATLLGVSRA LQTLRRQVLELAALPVNVLIRGETGSGKELIARCLHDFGPRAGKPFVALN CAAIPEQLFEAELFGHESGAFTGAQGKRIGKLEYADGGTLFLDEIESMPL AQQVKLLRVLQEQKLERLGSNQSIKVDLRIIAATKPDLLDEARAGRFRED LAYRLTVAELRLPPLRERREDIPLLYEHFAQNAGERLGRSVAPLSGAQLS RLLSHDWPGNVRELANAAERQVLGLGEPEPDAIEPGQSLAAQQEAFEAQC LRAALSRHKGDIKAVLNELQLPRRTLNEKMQRHGLTREQFLKEE >PFL_4482 chemotaxis protein CheV MAGVMDSVNQRTQLVGQNRLELLLFRLDGGQLYGINVFKVREVLQCPKLT LMPKSSPVVCGVANIRGATIPILDLAMATGSGGLQDQSNPFVIITEYNTK TQGFLVRSVERIVNMNWEEIHPPPKGTGRDHYLTAVTRVDNQLVEIIDVE KILAEVAPTSEAISAGVVDVETQHKAVSLRVLTVDDSSVARKQVTRCLQT VGVEVVALNDGRQALDYLRKLVDEGKKPEEEFLMMISDIEMPEMDGYTLT AEIRNDPRMQKLHIILHTSLSGVFNQAMVKKVGADDFLAKFRPDDLASRV VDRIKAADHS >PFL_2182 methyl-accepting chemotaxis protein MNVRTMNLAPRSAAFFSLIVLVVFALGIVAVLQMGKLRDAEQDVETNWMT SIREIGKMKTSVLRLRLESIRITVTTDEQQRQTRIASLSGYRSNLQNTIN QYEPLITGPAERELYQAVATDVQAYFKLVDELEPLLRSGDNAAAITLINT RISPMTNAMQEKMDKLSDFNDEGARQAGITAESVYSSGLTLVLVLMGVTV VLTVVLAAVLTRSITAPISDALAVAERIAGSDLSREIGVSGRDEAGRLLA ALAQMQTNLRETIAHIADSSTQLASASEEMTAVTEDASRGLVRQNDEVSQ AATAVTEMSAAVDEVARNAEAAAQSSRESMEFTRSGIENVAQTLKAIEGL AGNVASTGEQVKALSSRAQDISKVVEVIRAIAEQTNLLALNAAIEAARAG EQGRGFAVVADEVRALAHRTQQSTQEIEQMISAIQADSTHAVSAMNVSAE MASSSISVAQNADLSLKQIAQAITQINERNLLIATASEEQAQVAREADQN LTSIRELSIQSSAGASQTASACGEMANLAIELNRLVARFKV >PFL_5871 conserved hypothetical protein MPPQPQIMVDLQMEQYMPDPDLEVIAKLISQDPGLSGALLKIVNSPYYGL SNKIASIQRAVNLLGSRSIINLINAQSIKGEMSDETIVTLNRFWDTAQDV AMTCLTLAKRTGSQAVDEAYALGLFHDCGVPLMLKRFPDYMTVLEEAYGS AGPEQRVVDTENRAFNTNHAVVGYYTAKSWRLPEHVTNAIANHHNALAIF SDESSRNSQLKNLLAILKMAEHICASYRVLGNQVEDHEWNSIGHLILDYV GLSDYDFENLKETVRELGAH >PFL_4491 response regulator/TPR domain protein MLAYHQKSFLIVDDFSDFRSSVRSMLRELGVKDVDTADTGEQALRMCAQK RYDFILQDYHLGDGKKNGQQVLEDLMLEKLISHESVFLMVTAESSQAMVL SALEHEPDAYLTKPFNRSGLAQRLERLQQRKTLLKPILQALDRGKPVEVL NACIALCKQDPRYAPLCLRYRADALRDMHQNEALERLYNSILADRPLPWA YVGLGRLLFKRGQVGEAKAVYEKALKAFPMMPGLYDGLAEVLVAEGDTQR AQNVLEEAVRLSPLAVRRQALLGKLAMANEDFDSASRAYRQAVSQGAQSR FKDPESNLGLAHALISKGSERGLDTRTRLEINQTLSAVAKENPTDPGLQI RARLMKATSLLLNDAETAEKLTEQALLRLDGMEQFMSPEAALLVAKQLQM LGQASAGASMLKNCAEIYGDDPKVMQNIAKLTDDPTILSSSNAAADINRQ GVRSYKGGNLVEARELFRKALAMQPKNISIALNMAQSLLHGADANPDAAL LEECRACLKLVGMMPDTDARYPRYQKLRSKAFGQ >PFL_2150 transcriptional regulator, LuxR family MNSQILFPHIGKVIASTGSRNFPRMLHDLILTQLAVDATHITQLRADPEQ AIGRTGNTLMQTRHPLYSDAHASNDPLLLTGFPEQPGEPAPGPSLQRQRG HADPAQLHLTGRKDSYHYVLSVYRSSQDQSFSPQERLLLEDISPLLLPMV EKHISALQPRGDAAEQDSAAIEGLANLRLRFAARLEQSGLRLSNRELEVC VGLLAGRTAPQLAEQLKLKVNTVESYLKRAAIKLGISGRHSLLRWMYSPE EQAPHSSETPTA >PFL_4922 diguanylate cyclase, putative MKWRRTFQARIVGVLALLLLVLIAAVYFAVKTATTQAVERQAQLQLKIGT RVFERLLDLRGRNLQYGVDWLVVDSEFRRAVLSGKPVDILAALAQHSGGI RSSEMFVLSPEGRVIASTLPVIARDQHFPYDQALRRAMRHNTHMLFVAIK GRPYLLVQGEVLESLPIARVVMGFPMDELFAQELRSMSNLEVSFLTVDGQ HPGELFSTQPEFFWSPIINVLADSLWQSLPQLSETHGQRFLNQALQLANT GDAGDPRVMALLQSPLEQALQAFAPLDREFMWIAMVALVVSLVCALLMAR RVSRPLEDLAQAARRIGAGNYQAPVTIKRSDEFGVLADAFNAMQSAIATR ERQLAHNALHDPLTGLPNRALAIERLTKAIATRRNVVLLYLGIDNYRAIN EGFGTEGLDQMMGELSRRLREVLSQGDTAARITASEFLLLLENTELDGAM AMADRLHDLLSRPQLIQGDEVRRQICMGMAVYPADGKSAEELISRAAIAR HDASLKPGYLQVYQQDRDLAHQRQISLIRDLRRAAAEGELFLLYQPKLDL RRDYLHQAEALLRWQHPVFGVVSPAEFIPLAERTGSMHSLTAWVIEACIR QLAEWNRRALPVRLSLNISASDLEDDGLEVRVSDYLEGYQVAAEQLVFEI TESAIMRDPEQALAVLQRLRGCGISLSVDDFGTGYSSLAQLQRLPVQELK IDQSFIRNLDETSGDAVIVRSTIEMSHKLGLKVVAEGVEYEHCLKLLESW GCDTVQGYLISRPLPTEAFERWLVNSRVSS >PFL_2459 response regulator MIPLLICDDSSMARKQVLRTLPSEWRVSVTQACNGREGLEALRRGLGKVA LLDLTMPVMDGYQVLSAVQEEGIEAQIIVISGDIQEEAVRRTRELGARAF LKKPFDPQQLRALLNELQLLDSTDAKPLAAPSPAPVVTFRDAFRETVNVS MGYAAALIAKVLDVFVHLPIPHVNVLEAGELQMLLADANRARQLTAICQS YIGSGIAGEALLMFYDSEVADIAQLIEQGTDPYQEMEVLIDLSSVLIGAC LSSIADQLDVFFSVGHPQVLGEHTTIDELIVLNQQRWKKTQAVEISYSLE EQNIHFDLLLLFTEGSMALLEQKLAYLMS >PFL_4067 universal stress protein family MSQYQRLLLIADPQQHQSPAARRAVALARASGAALHALVFVEPPARTYLW EEHLEDSEREAYLQRHERWLQVEAQWMAEEGVQVTTQVIWSTQVLKDMLA YIDEFRPDLLIKDVTLESALKRVFVTPLDCHLLREAPVPVHLVNDAPHKL PRRIVAAVDPAQSDTQIRGLNTQIIQTAHALALQCDAQLHLLYAYDLMPM LDGVAPVASTAWSVNCLDELRDSLHKEFERLGDEHNVPQEFRHFIMGPPV PGIAQFVDEYLVDVVVMGTVHRTGFGRLIGSTTERALYSMPGSILAVKAS GAA >PFL_0190 sensory box-containing diguanylate cyclase, putative MSVSYRNGLRAALLYLLLSLVWLQFSGYLLSSFFDEFSDRAHWQLVGGYA WAVVSAVLIFFARARLLRVLGADRWLRHQQKDRERLRQAAAVFDCTREGV LVSDTQGQIVHVNRAFIEITGYQREEVLGRQPSLFKSGHHSAQFYQSMFD SLQKTDEWSGEIWNRRKSGEIYPQWQTIRAIRDEQGELTHYVAVFSDISA IKDSEHELAHLAHHDPLTDLPNRLLFTDRAEQALASAQIHKRGCAMLMID LDHFKMINDSLGHNVGDQLLKAVAERLGGMFGPGITLARLGGDEFAVLAE SCPQLVQAAALAQRIIDGLKEPFQLGEQQVVINASIGISLFPSDALSASQ LLRNADAALFKAKSAGRNGYALYTEELTAHAQQRVEIAFELRRALDQQEL RVYYQPVHDLKTSRLVGVEALVRWEHPERGLVSPAEFIPIAERTGMIAEI DAWVMQQACRQMCQWQADGVVLSFIAVNVSTRLFARSELYQQVAQVLHET GLDPAYLELEVTESAVMDDPEVALEQMHRLRELGIRLAIDDFGTGYSSLL RLKRLPVQKLKIDQGFVAGLPFDEDDAAISRVIIALAQSMGMQVHAEGIE QVEQARFLLEHACDLGQGYWFGRPMPAAQLVWSNAPQIR >PFL_3337 conserved hypothetical protein MSLAAHAGELRMLTDNHPPLHFQQGERMVGFGVDVVQALAQRSGDTVNVQ LRPMLRALRDAGSDDDTAVFTILRTAERESRYQWVGPLMRTETALYTRNG DSTPVTDLHQTRGQIAVPRKWLVYSYLKQQGLDNLWGVDSPEIMMRLLQV GRVQYVVADTMSVGTFAAEEGLALDQLRYQMPLMHQDAYIAFSPKVDAAQ VARWQQALDGMKRDGSLQQLKRRWHIDQATPQVD >PFL_5497 GGDEF domain protein MDFVPKILGNVVLLLSAGLNWTAMRVFAGRRPHVPGLLAGAGIWLILCVV PAFYQSMPVRVSVYSLLAAAYGVLTLLEFWRSRQQLEVAYMPAVVLTLLH TMYYIVRAVVDQGVAMDQALKGYGAGVPLFSFMLFESMLYVIGIAYVTLC MVKERVELRFKAAAFCDALTGIGNRRAFMVNGERMLIECQRRCSPMALLL CDLDHFKRLDDAYGHQTGDQVLVAFSQVLAETLGTKDVYARIGGEEFACL LAATDEQAAVTVAERVRQAFARLPLLEPGLLSVSIGVVSSETRGYDLPRL LSLADEALYDAKHQGRNRVHTVSRSALELQPD >PFL_0884 sensor histidine kinase MLAPVKLLSATRQNLWRLTFIRTLVLAAQAGSVGLAYWLDLLPLPWLQLG VTLMFSMVLCAFTAIRLRTSWPVTELEYALQLACDLFIHSVLLYFSGGST NPFVSYYLVPLTIAAVTLPWRYSVVLSGIALTLYTLLLARFYPLQTFPIA RENLQVYGMWLSFALAAAVITFFAARMAEELRRQEELRAIRREEGLRDQQ LLAVATQAAGAAHELGTPLATMSVLLKEMRQDHPDPLLQDDLGVLQDQVK LCKETLQQLVRAAEANRRLAVDMQEVTQWLDEALNRWHLMRPEASYRFHL LGEGPVPRLAPPPDLTQALLNLLNNAADACPEGLEVRLDWDAENLTISIR DHGAGVPLAIAEQIGKPFFTTKGKGFGLGLFLSKASVTRAGGSVKLYSHE EGGTLTELRLPRAARGDDHE >PFL_4239 sensor histidine kinase/response regulator MPGTLAMTPALLPMGVAALLLLSMAAGLGLACLYRQLRQHRQQVQALQQT VATLGTSLQQAERANRLKGQFLGHLGHEIRTPLNAFIGLLELVLQRTEDG SANRGSLELALGAASDLRELLGDLLDISRIESGQLQLNPAWTCLSHSAEA VLGVFQALARQKNLDLSLEFQAPSPEPQVLVDGLRFKQILTNLLSNALKF TRQGKVQVKLQLLPAARAGHFDLLLRVLDTGIGIPPQERQRLLQPFAQVE PTSQSPRDSSGLGLPISHQLCLQMGGSLSLHGRTGPGCEVQVRLTLPGRT AVAPRPVAATPAAAQLPLDVLLADDHPASLTLLQGQLEHLGHRVTCAGNG LQAYQLWREGDFDLLIVDCNMPLMNGYQLAEAIRRSEGSGPAVNLIGCSA SNDPQTHQRGLDAGMHDCLCKPLGLELLGSRLATLHPRPRPDSFSIEALF TLTHGKPQLVRSMLEKLSQCCREDRHLLGRIPPDDFTALLELAHKIRGSA LMVRATPLQNCCEDLERACLERAGATVISTAVRALDLALIRLAQSLHRHL EGQAQSQPALPREATRPASCQENSKRPVLPRRQPHP >PFL_0128 methyl-accepting chemotaxis transducer MNLKFSHKILLAASGVVVLAFALFTLYNDYLQRNTIRQNLESSIQQAGEL TSSSVQNWMSGRILVLENLAQNVAHQGQNADFPGLVDQPAFTSNFQFTYV GQANGTFTQRPDAKMPDGYDPRQRPWYKQAVAADKTMLTPPYMAAVGGLV VTIAMPVKKQGELLGVVGGDLSLETLVKIINSVDFGGLGHAFLVSADGQV IVSPDKDQVMKNLKDIYPGANVRIENGNQEVVLNKQERILSFTPVTGLPN AEWYIGLSIDKDKAYAPLSQFRTSALIAMFIAVAVIAVLLTLLIQVLMRP LITMGRAMQDIAQGEGDLTRRLVVESKDEFGELGSSFNQFVERIHASISE VSSATRQVHDLSQRVMASSNASIIGSDEQSARTNSVAAAINELGAATQEI ARNAADASQHASGASEQADDGRQVVEQTIQAMTELSQKISLSCTQIETLN ASTDNIGHILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRN LAHRTQESAEEIHKMITSLQVGSREAVSTMNASQASSEESVEVANQAGAR LVSVTQRIGEIDGMNQSVAAATEEQTAVVETLNVDINQINLLNQQGVANL NETLKDCDALSQQASRLKQLVDSFKI >PFL_4180 sensor histidine kinase MRSLRLRLSMTLGAAFILIWALAAAWMLSDLRNQMMFSLDQRLVASARMV AGLLEQMPALPSHGPSNQINSAALTIPGGMACQVSSLRGQILARSHSTPE HPLEAEKLGFHDQMIDGAPWRTFTLVRGDMRITTADRQVEREALNMSVLL AASVPVGVALLGCLWLLWLGIGQSLAPLNRIRDALMRRSADSLEPLQIQP MPSELRPLLETQNQLFQRIAKTIERERRLTGDAAHELRSPLTAIKTHLQV ARMTEGAARDQSLARAEEGADRMHRTLEQLLLLARVEGSLSFDDGVHCTA EQVARLAIQDAAVGARARVKLHMHGKAGEAAVEMPSTLAIAALRNLLDNA LRHTPEECPVELNLETVGARVRFQVRDHGSGIPAQDLQHLTQRFWRDSQS SGCGLGLAIVQAIVQRCGCELNFDSRPDGLRVELTLPAHRA >PFL_5651 bis(5'-nucleosyl)-tetraphosphatase, symmetrical MATYAVGDLQGCLEPLQCLLEQVAFDPARDRLWLVGDLVNRGPQSLETLR YLYSIRDSLVCVLGNHDLHLLAVWRNVERLKKSDTLREILEAPDCEELLQ WLRQQKLMHYDEARNIAMVHAGIAPQWSLKKAQKCAAEVEEALRDDNLFD PFLDGMYGNDPAKWDSDLKGVTRLRVITNYFTRMRFCTSDGKLDLKSKEG LDTAPPGYAPWFSHKERKTRDLKIIFGHWAALEGHCNEPGIFALDSGCVW GGAMTLLNVDSGVRLTCDCDAQGRTAALSPDPLPAPAKR >PFL_0197 cyclic nucleotide-binding protein MDLHQWRECLMTGQWFSHLPASLQNSLLDSARLRRLTAGQCLFRRGDPPC GLYAVLEGTVRVGAVSEQGKEALLSLMEAPHWFGEICLFDGQPRTHDAYA EGACTLLQVPQANLLQLLEQQPQYWRQFALLMSHKLRLAFINLEQLSLMP APARVASRLLAMAAGYGEVAQARRVLQLPQEQLALMLSLSRQTTNQILKE LQHQGILRLSYGEIEILDTERLRALTSP >PFL_5775 amino acid ABC transporter, periplasmic amino acid-binding protein, putative MLRLHRALALIGLLLLGQSAFAERLRLVADAWPPFTDATLVNGGVATDIV STALSRAGYSSEFEQVPWARALLGIGEGRYDVLVNAWYNEERTQLGQFSA EYMVNRVRFIKRKDAPLEYSNLKQLHEYPVAVVRGYAYSPEFDNDPDLQK VPVHNFAMAVRMLAADRVKLTLEDEYVARYYLARESPRVRNAVEFLPKPL SENSLHILVSLKNPEHAQIVARFDKEIAAMKADGSYDRLLRQHGM >PFL_5115 conserved hypothetical protein MHVGVLGLSLLATGVMAAVSADEAAKLGTSLTPMGAEMAGNAAGTIPAWK PLATNAGTVDSKGFLSNPYGSEQPLFTITAQNVEQYKDKLAPGQYAMFKR YPETFKMPVYPSHRGATVPADVFAAIKRNATSTNLVSGGNGLENFETAIP FPIPKSGVEVIWNHITRYRGGSVTRLVTQATPQANGSYSLVYFQDQFVFR DKMKDYDPKNPGNILFYFKQKVTAPARLAGGVLLVHETLDQVKEPRSAWV YNAGQRRVRRAPQVSYDGPGTAADGLRTSDNLDMYNGAPDRYDWKLEGKK EMYIASDSYKLDSPTLKYADIIKAGHINQDLARYELRRVWHVVATLKEGQ RHIYAKRDFYIDEDTWQAAVIDHYDGRGQLWRVAEAHAENYYDKQVPWYA LETLYDLQSGRYLALGMKNEEKQAYDFGFTATTSDFTPAALRQDGVR >PFL_5213 methyl-accepting chemotaxis transducer/sensory box protein MFNKRLKQELSTLREELSSLQQVKESLESEMLVINLSADGRIQSVNHNFA QEMLYKTGDLVGRALEDIVPEHVKHDEFHLRFKATLTRGEHFAGAVRLLR GNGQEAWLRSISQPVRDSEGRIKYFAIFSSDLTRTIEASREHENLIGALM RSTALIEFDLNGNVLTANDRFLSSMGYSLAQIQGKHHRIFCEPEEYNSQA YQAFWKRLNAGEFIAERFKRIDAHGRVVWLEASYNPVMDANNKLYKVVKF ATVITDQVNQELAVAEAASIAYNTSLQTDNSAQRGTTVVTEAVNVMRDLA KHMQEAGEGIGALNEQSLVIGSIVKTISGIAEQTNLLALNAAIEAARAGE QGRGFAVVADEVRQLASRTSKATEEIVGVVRQNQDMAREAVELMAEGKLQ AEQGLALAAEAGTVIVEIQDGAQKVVSAVGQFANQLSS >PFL_1130 CheW domain protein MDELAHKRNGATGARNALFLVFRIGQERYALQAVDVVEVLPRLQLKPIAQ APSWVAGVFAYRGVVVPVIDLCELTFGRPAQLRTSTRLVLVHYRGDAGQP ARILGLLLEQANDTLRCDPAQFQPYGLDNRQAPYLGPVREDAQGLLQWVR VDDLLPLKVRELLFPAVPLDPASLEEPR >PFL_3155 sigma factor regulatory protein, FecR/PupR family MTDHPESLEDAAIDWLVLLHSGNATPAQRMAFQQWRQRSPAHAAAAAEAQ QLWGDLGQTETARQHQAPPVMVRQPRRLWPALAASLLLALGAGLGWQQWP ASTSDYHTGVGQQQSITLADGSRVTLNSASALSVAYSADERRVILRSGEA LFEPLADPQRPFVVQAQAQQLQSAASAFSVRRDGHQLTVVVREGQVQFSG DHAPVLLQADQRLQYQPGQPLLAQQTVDAASLTAWQRGKLIFNGRPLGEV IGELERYQHGRILISDGQLAALAISGVFDLHDPQGSLKALQQRYPLHVTY LPWLAVLH >PFL_4192 periplasmic binding protein MSLPLRSALRMLLLALATLWVCPASSAQLVRVAAAHFPPYTVRPETGADT GLLPQLVEALNQSQSDYQFVLVPTSIPRRFRDFEQGRVDLAIFENPAWGW QNITHTSVDMGLEDAEIFVAQRQGGRQQDYFANLKGKRLALFSGYHYAFA QFNADPKFLADTYNATLTYSHDSNLLMVLRGRADIALVTRSYLSDFLARN AESTEQLLVSERIDQVYHHYALIRPKAPITAEDFSGLLQKLRDNGQMHKI FDPYRIVVMSVPHA >PFL_4876 sigma-54 dependent DNA-binding response regulator MNNELTVLIVEDDPHVLLGCQQALALEDIPCIGVGSAEEALAQVGENFPG IVVSDIRLPGIDGLELLNRLKARDRSLPVVLITGHGDISMAVGAMQKGAY DFMEKPFSPERLVDVARRALEQRGLAREVTSLRRQLAERSSLEGRIIGRS PAMQNLRELIANVADTSANVLIEGETGTGKELVARCLHDFSRRHQQQFVA LNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHAHQGTLFLDEVESM PINLQIKLLRVLQERTLERLGSNQSVAVDCRVIAATKSDLDEMSRAKEFR SDLYYRLNVVTLELPPLRERREDILQLFEHFLQQSSLRFDRAVPELDNQT LSTLMSHDWPGNVRELRNVAERFALGLPAFKKPGSSVAQGLGFAEAVEAF ERNLLNDALQRSGGNLTQASQELGMAKTTLFDKVKKYGLSH >PFL_4057 sensory box histidine kinase/response regulator MTTSPPRGAAPKTSRGGEIGAAIRRFDWSQTAVGPREGWPGLLRSTLSQM LESPESLYLLWGPQMQFFFNDAYRPVLGPRLANALGQTIQTLWADAWPDV QPMVEQAFLGYSCRHEDLPVNMQRYPGEELTWWSFSMSPVYDEDDEQVLG VLCHTVETTDRVLLARHARQTEAHLRETRELNTRVLAASNDCIKVLDLDG QLSFMSEGGLRVMEVSDFNAVRGCPWPDFWQGQGHQEARDAIAAARQGRS ARFQGAADTLQGRTKWWDVQVTPMLDAAGQPEKILCISRDISATREAQEE LRRLNESLEQRVQERTQERDRIWQLSTDLMLVADFNGRIVAVNPAWTQLL GWEREELEGSSFYDFIHPQDSLAAAGAAADLSRGESFSRFENRFRHRDGS YRWMAWSAVPDPHHIHAVGRDMQAEREAAQALRKTEDILRQAQKMEAVGQ LTGGVAHDFNNLLTVIRSSTDLLRRNLSEERRQLYIKAISDTVDRASKLT GQLLAYARQQNLRPETFDVGASVQLLAQMINPLIGACIELRIELPQQPCY IHADAGQFDTALINMAVNARDAMQGEGLLVVAVERVAQIPPSASQGAQAG DFVAVSLTDTGAGIDPQQIERIFEPFFTTKEVGKGTGLGLSQVFGFAQQS GGGLAVHSQPGQGTCFTLYLPRAEALAGLPTPTQAVVPMIDGQGMTLLVV EDNPEVGVLLAQSLNELGYQTEWATSAAEALRRLGEERTRFQAVFSDVVM PGMSGIELASRIRCDYPRLPVILTSGYSPALAQGQTREFVFLQKPYSVAE LALALSAAIGQPEVP >PFL_0201 heavy metal sensor histidine kinase MKRSSSIAWRLALAFAAVCALVLSVIGVFLYRSLAGEIAYRDDLALLGRL EQVRALLQDSDSLDALQARPRLYQNMLGNQESLLLVLRADGSTVIDINPR RQPLPALDPIALQQAPQRTDVRLWPGPDDVPVALLAGQARGPKGEALTVV AGKVLSEREQMLASYRLRLYLAVGLGALLAFALGLLLLRRGLQPLRQLSE AARQIDLRSLDRRLHTNGIPAEFHEPVQALNAMLARLEESFERLSQFSAD LAHEIRTPLHNLLGSNGLALNQPRSAAEYQEVLASNMEEFERLGRMAENL LFLARAEQADAVLDLQVLSLGGVGAQLCDYFEALADDRQLRLENGFSGEL RADQQLLQRALGNLLANAVRHADAGSLIRLRRHDEAGWCWLQVHNQGPAI APEHLPRLFDRFYRVDPSRAEPGDSGGLGLAIVHSIMLLHGGQVRVTSDE QATVFELGFPLL >PFL_5823 sensor histidine kinase/response regulator ChpA, putative MVDRHDYVALEWVKGEIAETLKQAHQALEHLADDPQALEAIDQCLEGIHL VHGSLQMVEFYGAALLAEEMEKLALALQQGRVAQRDEALRLLRQAIGQLP QYLDRVQSARRDLPLVVLPLLNDLRSARGESLLSETSLFSPQLPSLPPLS DKALAALEPLELPNQLRKLRHMLQTALVDLLREQDDEQSLGYMAKVFERL EALCQDAPLAPLWHIASALVEGMRHDEIANSPAVRSLLKDADKELKRLLE QGMAGINRPAPDELLKSLLFYIAKARHPTPLMLTMKERYGLDDALPDSAV VDEERARLAGPDRDAMRSVLTAVCDGLVRVKERLDLFVRSDRQHTDDLEG LLSPLRQIADTLAVLGFGQPRKVIIDQLAVVQSLAQGQRAPDDAVLMDVA GALLYVEATLAGMAGTVEPESREESRLPTTDLTQIHQLVIQEARVCLHQA KDLIAECIEADWDAEHLQALPELLTQVRGALAMIPLPRAAGLMQACQQFV VEHLLAARSRPDWQQLDHLADVLTSLEYYLERLSEDHEAPGEKILDVAQQ GLLALGYVPVEQVPLLDQPLSPSEALVMQDLQELDDPRVAQSLADVLAVP VSALNPPALITPGSLLPPPGDEEPVDDELREVFLEETEEVLEMLREYLPR WAADPHGTSALSELRRAFHTLKGSGRMVRALVLGELAWAVENLLNRVLEH SVEPGVEARQLVADTLQLLPELIAEFAQQAQRQRDDVDRLAARAHALANG AQGSAPVPAEALDPQLLEIFRTEAQTHLDSINRFLEQAAEHVPLQASDEL QRALHTLKGSASMAGVLPIAELAGPLDQLAREYRAHLIPLDLDEVELLLE AEGLLRRGLRQLDSDPLAPIDGARSLVGRALALLGERLETLLSAPDSAPR AKRDPQLINNFLAQGMDILLDAESLLRRWQQHPGERQELSALLDELTTLG EGAHLADLHPVDELCEALLDLYGAVEESSLAVSERFFHEAESAHDALINM LDELAAGQEVSPRPERVQALRELLDEGLDPSATGLIKSDGSRALSISELG AATARLEQAEAPLQADDEIVEIFLEEAVDILESADQALQRWLADPDNGAP LSSLQRDLHTLKGGARMAEVAPVAELAQELESLYEGLVDRRYSHSQHLGL LLRSSHEQLALLLEQLQGQHPLDESRAQIEAVRSYRQQAASTGEVAQGTV EADRAAQDPELLEIFLEEGFDIIDSSAAALARWQAEPQGRQEVETLLRDL HTLKGGARMVEIAPIGDLAHELEFLFEGLSAGLLQPSPVLFTLLQKSHDR LAQMLDAARAGQPIEPAQKLIDAIHDLSHPRVATGVAAEAALPSTKPEPA APAAEAAVAGDMVKVSAELLDDLVNLAGETSIFRGRIEQQVNDARTALGE METTIERMRDQLRRLDTETQGRILSRQQVEAERLGYEEFDPLEMDRHSQL QQLSRALFESASDLLDLKETLDRRNHDAENLLQQQGRINTELQEGLMRTR MVPFERMVPRLKRIVRQVAEELGKDVEFVVGNAEGEMDRNVLERMVAPLE HMLRNAVDHGLESAEARLAAGKPAQGRISLDLSREGGDMIFDMRDDGAGV PLEAVRKKAIKRGLLDPEAQLSDREVLQFIMQPGFSTAEKITQISGRGVG MDVVHEEVRQLGGSMSIDSVAGQGVHFRIRLPFTVSVNRALMVQCADEQY AIPLNTVEGIVRVLPAELDGYYQLDPPRYEYAGQSYQLCYLGELLHTVPR PKLLGQVQPLPVLLVHCNEQRIAVQVDTTAGTREIVVKSLGPQFAAVQGL SGATILGDGRVVLILDLLAHIRALQAQAPLPRLAGDEPASEVQPPRPMLV LVVDDSVTVRKVTSRLLERHGMNVLTAKDGVDAMALLAEHTPDLMLLDIE MPRMDGFEVAIQVRNDPRLQHLPIIMITSRTGQKHRDRAMAIGVNDYLGK PYQESVLLESIALWSKTHA >PFL_4827 GGDEF domain protein MKLELKNSLSVKLLRVVLLSALIVGVVLSCAQIVFDAYKTRQAVASDAQR ILDMFRDPSTQAVYSLDREMGMQVIEGLFQDDAVRMASIGHPNETMLAEK SRDLQKSSSRWLTDLILGQERTFTTQLVGRGPYSEYYGDLSITLDTATYG QGFIVSSVIIFISGVLRALAMGLVLYLVYHWLLTKPLSRIIEHLTTINPD RPSEHQLPLLKGHEKNELGIWINTANQLLASIERNTHLRHEAENSLLRMA QYDFLTGLPNRQQLQQQLDKILVDAGRLQRRVAVLCVGLDDFKGINEQFS YQTGDQLLLALADRLRGHSGRLGALARLGGDQFALVQADIEQPYEAAELA QSILDDLEATFALDHQEIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLA KTRSRNRYQFYIASVDSEMRRRRELEKDLREALARDQFFLVYQPQISYRD HRVVGVEALIRWQHPEHGLVPPDLFIPLAEQNGTIIAIGEWVLDQACRQL REWHDMGFSDLRMAVNLSTVQLHHAELPRVVNNLLQIYRLPPRSLELEVT ETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI DKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQEAYIISEG CHEGQGYHYSKPLPARELGAYLKQAQRSNAAIL >PFL_1550 conserved hypothetical protein MKNLSILTLASSLLFALPTWACTPDEATAKREQLAQEVSKITEQNPAKAK EINAELQKMDLSTSSKDLPDNCQLIDQRLKELATAEKKAES >PFL_3124 sigma-54 dependent transcriptional regulator MLEAPVQRRLLVVDPCDDCHRLLPGLRTIGWDVDSCDLESARERSCDVGL LRLQPFHLERPEAVKDLISRSGTEWIAVLSQEVLRLQKVGDFVCEWFFDF HTLPFDVSRVQVTLGRAFGMARLRGQGSIHVDQPEHELLGNSRPIRDLRK LLGKLAPTESPVLIRGESGTGKELVARTLHRQSQRHDKPFVAINCGAIPE HLIQSELFGHEKGAFTGAHQRKVGRIEAAHGGTLFLDEIGDLPLELQANL LRFLQEKHIERVGGSQPIPVDVRVLAATHVDLEAAITSGRFREDLYYRLN VLQVITAPLRERHGDLGMLASHFAHFYSQETGRRPRSFSEDALVAMGKHD WPGNVRELANRVRRGLVLAEGRQIQASDLGLLSLQAQDLPMGTLEDYKHR AERQALCDVLNRHSDNLSVAARVLGISRPTFYRLLHKHQIR >PFL_3328 response regulator/sensor histidine kinase MMDQLNNRRILLIDDTPSIHEDFRKILTPPEADDNGLDDLEAQLFGATAK PRQQPFELDSAYGGEEGLAMVCQAQERQRPYALAFVDMRMPQGWDGAQTI ERLWQQDPRLQVVVCTAYSDYSWEELLERLQGHHRLLILKKPFDNIEVQQ MANTLTSKWEMTARALLQMHHLEHLVQQRTEDLRQAGAALQLEIDERKQL ENQLVQSEKLASLGQLAAGVAHEINNPIGFVSSNLGSLAGYLQQLDQMLS AYRQAEEAIAAPELRKHLQSLRESIDLDFLQQDIPVLIRESKEGIGRVAQ IVKDLKNFSRVDSDQQWQLASLQQGIDSTLNIVANELKYKADLVTDYQPL PEIECLPSQLNQVVMNLVVNAAQAIGPERGTITLRNGVDGERVWLEVSDS GCGIDQEHLAKIFDPFFTTKPVGQGTGLGLSLSYGIVKKHGGQISVQSQP GVGSTFRVELPIRQARQELPAQP >PFL_1107 DNA-binding response regulator, LuxR family MKATTNNKLRIILADDHPIFLIGLRAVLEQDDSLAIVGEASSPSALAQLM QEIECDVLVTDFMMPAEQQNDGLRLIEQLRRRHPDLPIVVVTMLNHPGLF RSILDLGVTGLLSKASLADELPTAIARARQHKPYIAQAIKQALSLAGEVG PDRLVSSDQLSPRELEVIRLLAAGHAVGEIAAQLNRSKQTVSAQKVSAMR KLGLSSEAALYIYVQEHGLS >PFL_4997 DNA-binding response regulator MSRLLIVDDDIEVLALLKKFFVQQGYQVVVATDGASLWAALEREVPDLII LDLMLPGDNGLTLCQRLRQQHATPVIMLTAMGELSDRVVGLEMGADDYLS KPFDARELLARVRAVLRRAGENRPVSADVPRPLIKFADWQLDLTRRELRS PDQVMIPLSAGEFDLLLVFVEHPQRILTREQLLDLARGQAHDAFDRSIDV QVSRLRRKLEFDTKRPAMIRTVRNGGYLFTPSVTRQ >PFL_3940 transcriptional regulator, Cro/CI family MCVEAGNTQRIVRPMDKWIELVKANMKGRKVTQEKLAERLGMSQGGIGHW LSKRRQPKIEDMNRVLEEIGMGFLEVALVVREKPLLGDDGEPLADGPALL NKYNPYFRYPVSDWRVAGEVREDGQPAYVPERYELSDYQARGAAFWLVVV GDAMIAPSGLSISQDMLILVDPAIGAEPGKLVVVQCPGSDEAIFRKLVQE GGLRYLVPLNPTYPKMLYSDKCRIIGVVVQATAKF >PFL_2364 sigma factor regulatory protein, FecR/PupR family MSGAAVDPRVRDSAIDWLVRMQSGLMSAADHQALQQWRQASVEHEYAWQR VSSLPLMLQPGANLLADATARRALQAAGADPQRRRQVLKCLLALGLLGGI SWQGADSTLVRSALASYRTGVGERRHWALADGASLWLNTASAVNLDLSAR QRSLQLIEGELALDTPAGSASLQLSTPDAVLYSRGANLLVRHDRLGTQVT VLRGLVQVSARQHPAPLALQAGWQTRVDGRGAGRPSPIDTFLAQAWMRGI LPAERMRLDQLLAELSRYRPGFLRCSEAVAGLRVTGSFQLDDTDAALALV ANTLPVRIERRTRYWVTVVPA >PFL_0989 sigma factor regulatory protein, FecR/PupR family MNHRTSICPTPAQEQAALAWLSLLHDQPSSGDQATFSQWLQADPAHIEAY AQAQVVWELSEQPARTLADEDAFALHGLLRSMDAARGRARRRWSAGLALA ASVLLAVALGAGWQPGRWVDDLGADYVSAPGQVRTLTLADQSQVTLDADS AIAVDFSRGERHVQLRRGAGFFSVSHTGEPFVVDAQEGEARVLGTQFEVR LQPGGAQVTVLSGRVGVTPAKGAAQQVLGAGQQVAYGHGVAAPLHAVDSE AQLAWRQGWLNYYHAPLAEVVDDLRRYFPGRILLLNDELAARRISGSFSS KDPQAVLDSLQAVLGFQQHRVLGRFIVLR >PFL_3249 methylesterase, CheB-like MSQEIVSQGFWPQIEAIVVGASAGGVEALLKLFSGFAQGFRLPVIVVLHL PDERRSQLAEVFDRRLALAVKEADDKEQIVPGTLYFAAPGYHLSVEQDRS LSLSQEERLHHSRPAIDYLFESAADAYGRNLAAVLLTGANQDGARGLAEV KRQGGLTIVQDPNEAHVSTMPDAALALHQPDYILPLRGISRLLAELEGTH VK >PFL_4163 protein kinase MIRFCPNCQTERPLAEIFCEGQVDNRACGWELSAEAIHPEGWRPQPVITL EALEPQPPVAADSGSPLLCGNGHAMADGDLMCLVCGADPLAPEQQPPAAP PAADSETVIEGWRLLRQISSGGVRERFIAEHRETAHQAVLTLYQAGAEPD PSVYEALKRLPREHVPEIILTGRWDERAFEVAEELTGGTLADLGIVVSDR AAVQHIVRELGQALHAFSEAGLRHRDLRPATLLVRSREPLDLVISGFGSA RLSEFDLDIVSPLETSRYMAPEAIAGGVAAASDWWSLGMILLEQLTQGEC FAGINANAYLIHILANGVLLPDDLDPRLELLLRGLLARDRHQRWQWPQVQ AWLQGESPSVPASVASEEDAEEGASVALGSRRFRRPGPFALAAAEVEHWP QALDHLLRGVIVTWAEQAGLPARQLAGLRQVAQHEGLDDDTRLMLALKLL NPEMPLIQRGEIVTPGWLLEHPLDGYRLISGPAPDLLERLETEHWLSRLK LRTEQVRQRAQHQAIELDEEQLRIYLLSSSRARLAAQWEERQRLLPDSEH NGILSLADRRSISEEDLIVLLSAAIGQFRSVDAILEEAATLAREAVVLSF DAASARALLGLPRPALYREVDERISGFARCGVPSVDEWAEQFRLERRMPL ARALVLLAIGAEQWLEPQKQHYVSQILDFFEKKVASVVLRGPLVRMSIGK TTARVDLNELHSERSPAPALLDHLVARNAQPISLDPACFAENPQLDARLN SLYRQSSLYKRDTGIDGLYLGFPFLLTRDARGTTRTRIAPLLLWPVKLLL EVGSRGKVALVFDSEREEVRLNPGLDTLLGIDAAKLWRKAADELLGRSAL KAADVMDAFGMLATASSRVLGSLPPPSTEVQPYQDQLACAAVLFHVAFMG QAIGEDLRQLKALPPGGTGLETALRLNPAEPDSGDSAATALAPELQRFFT VASDPSQEAAVLQARQAPGLLVEGPPGTGKSQTIVNMVADAIGRQRSLLI VCQKHAALEVVHKRLVAEGLGNRVVMLNDINRDREPVIRSVREQLEALFK DDAVQQPWLHQRERLAARIEALEGELDRFHQSLHRIDEHCGLSYRQLIGE LIGLEQGPAALDVPVLRQHLAALDIASLTRLEEACAPLIRLWLPARYEHS ALAQLQPFPTDAATVQAFNQGFERLLSCEEQRLETLQAHPADFEVDDPAP YRAWLDQHLHSLLGLDDERRQRLARWLPLFRGSNGQAAEGDGLIQALQAL AQQLEQCDATAYQADLAPGLSALPAAQLRTLQQRARAVIQGRSWLARLNP LRLIRQRQLLAFLAEQGAAAQPQRLPELLAAALLESQWRPLRAQLQHLHQ QLSLAQIASDCGPGLLPQVRQDLGQLQEMRALAMTLAQAPRVEQLDAVVL TGERRSLDSLLAGYDAAFIRHSVRQDSLNALQRLDQWLQPELLGQLRQRV EHNQGNQSALNRLRDALPTLSAYQAFRARAGQLSPADLELLVVLRDYQDA LDAIPAEQLEAVVRHMLNREARLGWKRQIEQRQPELMLEHSETAAKIASL GEADTQMRNLNRQLLSEGIELSRLGTRKQWEDVTRLTGRRSRRLREFMEM GAGLGLMSLRPVWLMNPDVASRVLPLKPGLFDTVIYDEASQMPVEFALPT LYRGRVTVVSGDEKQMPPTAFFSSRVESDEAELFDGDQPDADADEEQREA FEDTWNRREIKDCPDLLQLARSSLPSTTLQIHYRSAYRELIGFSNASFYG NRLSIPVRHPQANILAIKPLELIRVDGVYQQQVNPDEAERVVDYLAELWQ APYAERPSVGVVTFNRKQADLIEERLELRAEQDPAFRAAYSQERERSEDG EDMSVFVKNVENVQGDERDIIVFSSTFGRNSQGSFRRNFGVLGQTGGERR LNVAVTRARRKVVMITSMPIADISDMLTTQRPPASPRDYLQGYLEYARAL SAGEFASGHSLLGRLVTERQDAKVQHNAHSDGFTQAVAAYIRTLGWSPVS ANEGDAFGLDFAIEHPDTGLYALGIECDTPRHGLLARARSREIWRPSVLR RAIPHLHRVSSQAWYHDPQSERARLQAAIEQALQPLAGADSVTQPPALAD TEQTP >PFL_0280 EAL domain protein MTDFPTSLTSPGNRCEGCQQSQPLGFDFSFAYQPIVDLRDHSVFAHEALV RGVNGEGAGTVLGQVNDSNRYRFDQRCRTQAITLAAQLGMQSHLSINFMP NAVYRPELCIRSTLEAARAQRFPLDRLIFETLESQHVDNYRHLTNILREY REFGFKTAIDDFGSGYSGLNLLADFQPDLIKLDMALVRDVDQDRVRQAII RAIVTMCAELGVTVIAEGIESAGERDFLSDCGIYLMQGYWFAKPAFKALA EVPAAAWNS >PFL_3921 sensor histidine kinase/response regulator MLIPVTCHRGHCVQRLSHHCCPGPLMPHPNAFLEKLASSSSRLNKSLLVL GALVLLLLGISYVGVTRMIEERRETLQFHFARLMENVHEQEVFLQDIARE SAKGERLPNAMLPPYSQKPLPDEGPNIYEGRGLPFSLPYSLKINTDRIAP SQYPKIFALGTHLAAYYSAFWSASHYQSPQVVLINGPDNFDLAVPSVGRL RGTGQLPMQTGHLVDVMTQVNKRLRGHNSPLPDLQVRWEPYVSSEDDKSA PTLLAYVSINLAKTALTVEGADTWVVLGSLMNLSQVNNIERLMQWSIYDD FTLITPRGVVLTGALKPGQVLDEGVNFNRDGLVFKLSSPGEQHWTAIYVI SLRSFLDYALWPLLCLVALALALLGCSRAVNRWYQARVILPAQRAHASIA ESEAFSRTVIDTAPTGLCVIRRSDHHVLLENQRAQQWHDNGQLMSLLTPL TGPGHADLEINGRHLHVAFVPTRYQGQDAWLCALHDVTRHVEDAAALEEA RQAADSANQAKSRFLATMSHEIRTPLYGVLGTLELLGLTSLAPRQQDYLH TIQRSSATLFQLISDVLDVSKIEAGQMTLELQDFCPLQLTEDTVRTYSAF ARSKGLLLYACIDPALPDRLRGDPIRIRQILNNLLSNAIKFTDNGRVVLR VQLLESDDGRAHVQWQVSDSGGGISLAQQQQLFDPFYQVNDATEQAGAGL GLAICKWLCELMAGQLNLVSEPGLGSSFTLQLALEHAPGELADCPVFSPG SSTVYVRAQVTEQAQHLIAWLNRFGLDCRPLRPDTPVSSALLVELSPLAD TAAWPGPKVVARADGPNPAQLRGTDREVDAHDVRAIAWAIYQAQHGVSAD SQPSSPEKPRQLNLQVLVAEDNVINSAIIKEQLEVLGCSVVVAANGELAL AQWSPGRFDLLLTDVNMPVMNGYQLATALRLQDQTLPIIGVTANALREEG ERCADVGMNAWMVKPLNLATLRAHLERHCKIALPATSVAPLKLSPKMREL FVTTLRQDMQTTLTALDNADAHRVAQQLHSMAGALGAVQLEELATTFVEL ECRLNGLSLTHALDLEVRQNLARLKDLLGTLE >PFL_1530 aceK, isocitrate dehydrogenase kinase/phosphatase MSQSWPAADIARMILDGFDDYREHFRQITDGARQRFEQAQWQQAQKASAA RINLYEEKVGETVARLHQAFSTESLMDVSQWPLVKSAYISLIDLRFDDEL SETWYNSIFCGLFSHDLISDGCMFIHTTRPSLRRARAAQTRSYKPQGELA TMLEQVFADYRFSEDYADLPGDLRRLEAQLRENLPDWVCKDPELTLELFS SVLYRNKGAYLVGRIFTHEEQWPLVIPLLHREGRGIQIDALITDEADVSI IFSFTRSYFMVDVPVPAEFIGFLKRILPGKHIAELYTSIGFYKHGKSEFY RALINHLASTDDRFIMAPGVRGMVMSVFTLPGFNTVFKIIKDRFSPSKNV DRATVIEKYRLVKSVDRVGRMADTQEFADFRFPLSKFDPACLEELLEVAP STVAVEGQTVLIRHCWTERRMTPLNLYLEHANEAQVREALEDYGLAIKQL AAANIFPGDMLLKNFGVTRHGRVVFYDYDEICFLTEANFRHIPAPRTPED EMASEPWYSIGPHDVFPEEFPPFLFADAGQRKLFDQLHGELYNADYWKGL QEAIRAGKVIDVFPYRRQGLEDE >PFL_3319 aer, aerotaxis receptor Aer MKNNLPVTQRERVFPAEQRLISATDTHGKITYCNDEFVAVSGFSREQLIG SPHNIVRHPDMPEAVFGHMWSYLKDGKSWMGIVKNRCQNGDHYWVNAYVT PIFSQGVIAGYESVRVKPERQQVERAAALYSHLRSTRLATPWRHRLLGAG VFVLPPLLAVLASAMAGWLAGLWAGLGVALLGLFAVQAHGAYRTGQLLGR ISAVSLGSFDSELIARTYTDERGPVARLQMILISEAAKIRTALSRLGDYA NQAASLASTSQNLSRQAESALGKQRDEADMAATAMNQMASSIAEVSVHIH DTAAAADQVNELTQVGSQEARRSRVVIEKLADTVDAVSQSVEGLAQETQS IQVAANMIHSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASKT RESTQSIQRIIQSLQQVAGQAVEVARQGSVEARSGVAQVVSTQQALDGIN SAVERIHQMSQQMAAASEQQAHVAEEISEQISNIARVSDQNADIAVHSCS IGGDLESTAHELNALVTRFNS >PFL_1901 aer, aerotaxis receptor Aer MRLNLPVTSVEQTFPDQQRLISATDINSHITYCNAEFAAMSGFSQAELIG STHNLVRHPDMPAAVFESMWGYLKAGQSWMGVVKNRCKNGNFYWVSAYVT PILEDGKLVGYESVRVKPSREQVSRAETLYARLRADKAPVCAWRRIEAAA RPLLLPVAVAVGCLAAFHWLPTLAAQGLTVAGFVAVGLLAQRRLGQQLKQ IVSSTPNTFADPICALAYSEALGPAAQLQMILISEEARLKTALTRLSDLA RQMATAAADSSQLSSRTESALLEQRAETDMTAAAMTQMAASITEVAEHVQ HTASEAHTANLLARQGSEVAGTSRDAIQLLARTVTQINQAVGDLAGQTQE IMVAASMIQAIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAGKT RESTQQIQGIIQSLRAGADEAVQIASLGIEEAEQGVQQVVQAQQALQGIG AAVERITDMSQQMAAASQEQSHVAESVSEQINSVAVTVQRTAENASAGVV RGAELENISSGLRALVERFNR >PFL_1927 aer, aerotaxis receptor Aer MRNNQPVTQRERTFPAQQRLISTTDAKGVITYCNDAFVEISGFSREELVR APHNLVRHPDVPAAVFAHMWGTLKQGLPWMGIVKNRCKTGDHYWVNAYVT PVFEGSQVVGYESVRVKPTAEQVRRAEALYQRINSGKSAIPKRDKWLPVL QDWLPFILVSQLSFMIGAWLNSHWGFALAAALSVPLGLLGLSWQQRGLKR LLRLAEQTTSDPLIAQMYTDSRGAQARLEMSILSQEARLKTCLTRLQDTA EHLNEQARQSDTLAHNSSSGLERQRVETEQVATAVNQMAATTQEVASHVQ RTADATQEANRLTGRGRDIAGETREAIQRLSVVVGETGLTVTQLAKDSDE IGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRT SESTGQIHTLIAKLQQTAATAVQTMDAGHRQAEEGVARVLEADQALVGIS EAVANITDMTTQIAAATEEQSSVAEEISRNISTIAQLADQTSEQAQHSAE LSEALTRTAHTQYSLVERFNR >PFL_2204 agmR, DNA-binding response regulator AgmR MYKILIADDHPLFREAIHNVISDGFPGSEVMETADLDSALALTQEHDDLD LILLDLNMPGMHGLNGLITLRNEAPTIPVVIVSAEQDKQIVLQAITYGAV GFITKSSARSQMTEAIEQILNGNVYLPPDIIRTQKSQPGRRSSETPSFPP ELLQALTRKQLLVLERMTKGESNKQIAYTLDIAETTVKAHVSAILRKLNV HNRVQAILSAGDIDFGAYLRR >PFL_0091 algB, alginate biosynthesis transcriptional regulatory protein AlgB MESAPENQGRILLVDDESAILRTFRYCLEDEGYTVATANSAAQADALLQR QVFDLCFLDLRLGEDNGLDVLAQMRTQAPWMRVVIVTAHSAVDTAVDAIQ AGAADYLVKPCSPDQLRLATAKQLEVRQLSARLEALEGEVRKPKDGLDSH SPAMKVVLETARQVASTDANILILGESGTGKGELARAIHGWSKRAKKSCV TINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADGGTLFLDEIGD FPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGRF REDLLYRLNVITLHLPPLRERSEDILTLADRFLARFVKEYSRPARVFSDE AREALLNYRWPGNIRELRNVVERASIICPQERVEISHLGMAEQPTNNAPR IGAALSLDELEKAHIGAVLATSDTLDQAAKTLGIDASTLYRKRKQYNL >PFL_6003 algR, DNA-binding response regulator AlgR MNVLIVDDEPLARERLSRMVSELEGYSVLEPSATNGEEALSLIDSLKPDI VLLDVRMPGLDGLQVAGKLCERETPPALVFCAAPDEFALEAFDASGVVHL VKPVRSELLLEALKKAEKPNRVQLAALTRPAAESGNGPRSHISARTRKGI ELIPLAQVVYFIADHKYVTLRHEGGEVLLDEPLKALEDEFGDRFVRIHRN ALVARERIERLQRTPLGHFQLYLKGLNGDALIVSRRHVAGVRKMMQQL >PFL_1910 anr, transcriptional regulator Anr MSEPVKLRAHNQAHCKDCSLAPLCLPLSLNLEDMDALDEIVKRGRPLKKG EFLFRQGDGFDSVYAVRSGALKTFSLSDSGEEQITGFHLPSELVGLSGMD TESHPVSAQALETTSVCEIPFERLDELALQLPQLRRQLMRVMSREIRDDQ QMMLLLSKKTADERIATFLVNLSARFRARGFSANQFRLSMSRNEIGNYLG LAVETVSRVFTRFQQNELIAAEGKEVHILDPIQLCALAGGSVEG >PFL_2184 arsC, arsenate reductase MRVLFMCTANSCRSILSEALFNHLAPEGFAAVSAGSFPKGQVLPRSLSTL QQAGIATDGLYSKGNDAFADNPPDIVITVCDKAAGESCPVYFGPALKAHW GLADPSDVRGEEAAIDAAFRATLAQIEQRCAAFFALPFNHLSRDQLKTEL DRIGTL >PFL_5200 bphP, bacteriophytochrome histidine kinase MTPQDAQAFEQLLANCADEPIRSPGAIQPHGVLLTLSEPELRIQQISANV EALLGQPAAQVLGQPLEQLLGDTDGQRIREVLQLPRLSDAPPLHLAVNGA RFEGLLHRHQGVLMLELEIQLEHLQPQHLKEQTENLGRLLRRLQTAKTLN ELYAISVSEIQAMTGYDRVLIYRFEEEGHGQVIAEATRPTMEVFNGLFFP ASDIPQQARELYRSNWLRIIPNADYQPVPLLPALRPDTQQALDLSFATLR SVSPIHCQYMKNMGVLSSMSISLLKGDQLWGLISCGNRQPLLVPHELRIA CQTIGQVLSLQISAMEALDISRQREEKVTALASLDQAMRDTPDSVFDGLA QVPQLLLDLTQAGGVAIIEDKQLHCFGNCPPQDEIRALHRWLQGTGQAVF ASHHLANVYPPAASYQQVASGVLAMTLPKPVDNGVLWFRPEVKENINWSG NPQKPLDLENSDAGLRLRPRTSFEIWKVEMAGISTKWSHGDRFAANDLRR SALEHDLARQVLREQQAVRARDELVAVVSHDLRNPMTVISMLCGMMQKAF SSDGPHTSRRISSAIDTMQQAASRMNNLLEDLLDTSKIEAGRYSIAPQPL DVSQMFEEAYSLLAPLALDKAIDISFHAEPDLRINADPERLFQVLSNLVG NAIKFTPKQGKVGVVAMSDGEQIVFSVRDSGEGIPTDQLPFIFDRYWTMK EGNPNGTGLGLYITQGIIHAHGGKIEAHSEVGKGSEFRFSVPRASL >PFL_1670 cheA, chemotaxis sensor histidine kinase CheA MSFGADEEILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHT VKGGAGFLQLNELVECCHIAENVFDILRKGERRVDSELMDVVLEALDAVN GMFSQVRERTEITAATPELLAALARLAEPAGAEPAAPAVEEVVEPVAEPV AEESPAGDITDNEFELLLDSLNAAKAEAEAAPAAAPAAQGEPASDEITDA EFESLLDQLHGKGQFAPDAVAPAAASATSGAAGAGDEITDDEFEALLDQL HGKGNFAVEALDSAVAAAPAAPAAAAPSAAAAGSDLITDHEFESLLDELH GKGKFSETPGAAKPAAASAAPAAAATAAVAKPAAKKPEPKAEAPKAAAAP AAAPARAAAAAPPAEKPASEAETTVRVDTARLDEIMNMVGELVLVRNRLV RLGLNSGDEAMSKAVSNLDVVTADLQTAVMKTRMQPIKKVFGRFPRLVRD LARQLKKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGIESPEER EASGKSRGGKVVLAAEQEGDHILLSISDDGKGMDPNVLRAIAVKRGVMDK DAADRLSDTECYNLIFAPGFSTKTEISDVSGRGVGMDVVKTKISQLNGSI NIYSTKGQGSKIVIKVPLTLAIMPTLMVMLGNQAFAFPLVNVNEIFHLDL SRTNVVDGQEVVIVRDKALPLFYLKRWLVSSAAHEEQREGHVVILSVGTQ RIGFVVDQLVGQEEVVIKPLGKMLQGTPGMSGATITGDGRIALILDVPSM LKRYAARRI >PFL_1131 cheR, methyltransferase, CheR-like MSEEQRFFDFLKERIGLDVASVGPAIIERAVRQRCNALYARSSDEYWQKL QGSRDEQQALIEAVIVPETWFFRYPESFATLVKLAKARLAQIKGMRALRL LSLPCSTGEEPYSIAMALLDGGLAPHQFKVDGLDVSPLSVERAKAALYGK NSFRGQPIEFRERHFNPEEGERYRLSERVREQVRLQVGNVLDPGLLASEP AFDFVFCRNLLIYFDQPTQRQVFEVLKRLTHEEGVLFIGPAEGSLLGRLG MRSIGIPQSFAFSRHHEPEPAPVVLPQPLPLPVPVRSVVPPTPRPRPFAR RPVAAPLSDGALMESDAASLLATIAALANEGKSAEARAACERYLQQHEPV AQVFYWLGLLSDVAGNAMEAQGYYRKALYLAPQHPEALAHLGALLASQGD VAGAQRLQERAARSVRSADSELKR >PFL_4481 cheR, chemotaxis protein methyltransferase CheR MSTGNLDFEQFRVFLEKACGILLGENKQYLVSSRLNKLMEQQGIKTLGEL VQRIQTQPRSGLREMVVDAMTTNETLWFRDTYPFEVLKNKVLPEAIKASP NQRLRIWSAACSSGQEPYSLSMSIDEFERSNMGQLKMGVQIVATDLSGTM LNNCKTGEYDSLAIGRGLSAERLQRYFDPKGPGRWVVKAPIKSRVEFRSF NLLDSYASLGKFDIVFCRNVLIYFSAEVKKDILMRIHSTLKPGGYLFLGA SEALNGLPDHYQMVQCSPGIIYQAK >PFL_3250 cheR-2, chemotaxis protein methyltransferase, CheR-like MATQDGKNLVERNTEIELRLLIEAIYLKYSYDFRDYSGASIKRRVNHALR QFECKTISALQERVLHDPTAFMQLLQFLTIPVSEMFRDPSHFLAIRQEVV PLLKTYPSIKIWIAGCSTGEEVYSMAILLREEGLLERTIIYATDINPSSL EKAKQGIFSLENVRAYTHNYQQAGGQRSFADYYTAAYDYAIFDKSLRENV TFADHSLATDSVFSETQLISCRNVLIYFNKKLQDRAFGLFHESLCHRGFL VLGSKETLDFSAYGKHFEPLVKQERIYRKT >PFL_5822 chpC, chemosensory protein ChpC MLDHRASTLTGLLLPLADRTLILPNVAVAELIDYQQGTFDLDSPPWYLGR VLWRERRIPLISFESACGGRTVIGERARIVVLNALGGRPELKFMALLVQG IPRSCKLDSQLSYVDVPLAALEKAAVQVVEQVAKVPDLLALEELLVTGL >PFL_4836 colR, DNA-binding response regulator ColR MRILLVEDNRDILANLADYLGLKGYTVDCAQDGLSGLHLAATEHYDLIVL DIMLPGIDGYTLCKRLREDARRDTPVIMLTARDQLDDRLQGFKSGADDYL LKPFALSELAARIEAVMRRSQGGGRRSLQVGDLSYDLDTLEVTREGRLLK LNPVGLKLLAVLMQKSPHVLRREILEEALWGDDCPDSDSLRSHVHQLRQV IDKPFAKPLLHTVHGVGYRLAEGRDGV >PFL_4835 colS, sensor histidine kinase ColS MEFKQSLAQRIIIAFALMSALVAGAFAMGIVATVHLVEEKLISAGLGGDL QRLLLMDNVGDWSHRPEPDQLFYYSGGRGDFELPKDLRHLDPGFHEVFRE ELSYHAMVEVVDGRRYVLLQDQSDFEERERVLFAVVLVGFVLSLALAVFL GWILARRVMAPVVRLARQVRHRDQLLGLAPPLAPDYAADEVGELAIAFDA TLGRLRQALSRERLFTSDVSHELRTPLMVLATSCELLLENPRLDPRGRAQ VERIARACDEMRELVQTFLMLARAQREDASMSPQLSLSQAASDLTGIWRE AIEAKGLELIFEPGTPGDNRYNATFLHAVMGNLLRNALHYTEQGFIRLSL VPDGFVVEDSGVGIPEEKREAMFQPFVRGDEKRGEGLGLGLSLVQRICEN QGWTVSLTTMTPNGCRFFVQLNSAKA >PFL_5713 creB, DNA-binding response regulator CreB MDAMPHILIVEDEAAIADTLIFALQGEGFTTTWLSLGRAALEHQQASPAD LIILDIGLPDISGFETCKQLRRFSEVPVMFLSARDGEIDRVVGLEIGADD YVVKPFSPREVAARVKAILKRMVPRVAPEAVAALFVIDPERVQISYRGQP LSLTRHEFRLLQCLLEQPERVFSREQLLDALGVMADVGYERNIDSHIKSL RAKLRLVAAQAEPIQTHRGLGYSYSPSHA >PFL_5712 creE, sensor histidine kinase CreE MTLGLRIFLVYLLFISLTGYFVLSTVMKEIRPGVRQSTEETLVDTANLLA EILRDDFKAGTLSENRWPQLLRAYGERQPAATIWGLPKNQVNHRIYVTDA KGIVVLDSSGLAVGQDYSRWNDVYLTLRGQYGARSSRSLADDPSSSVMHV GAPIRDNGQIIGVVTVAKPNSSLQPYVDRTERRLLWYGAGLIAMGLLFGA LLSWWLSAALRRMTAYALAVSEGRRAELPHYRGGEMEQLATAVEHMRTQL EGKAYVERYVHTLTHELKSPLAAIRGAAELLQGEMPLEQRQRFVGNIDSE SARMQQLIERLLNLAQVEQRQGLEERVNVPLAPLCKELLNSQHGRIEGKQ LQVELRVPADLAWSGEPFLLRQALGNLLTNALDFSPVGGLLRCSAQPVEE GVELVLFNQGEPIPDYALPRLCERFYSLPRPDSGRKSTGLGLNFVEEVVQ LHGGQMRIDNVPGGVQVTLRLP >PFL_2095 csrA, carbon storage regulator MLILTRKVGESINIGDDITITILGVSGQQVRIGINAPKDVAVHREEIYQR IQAGLTAPDKRETP >PFL_4504 csrA, carbon storage regulator MLILTRRCAESLIIGDGEITVTVLGVKGNQVRIGVNAPKEVAVHREEIYL RIKKEKDEEPSH >PFL_5352 cstA, carbon starvation protein CstA MKNNNSLLRHVPWLLLAIVGACALGVVALRRGEAINALWIVVAAVAIYLV AYRYYSLFIANNVMQLDPGRATPAVVNNDGLDYVPTNKHILFGHHFAAIA GAGPLVGPVLAAQMGYLPGTLWLIAGVVLAGAVQDFMVLFLSTRRNGRSL GDMVREEMGRIPGTIALFGCFLIMIIILAVLALIVVKALAESPWGIFTVM ATIPIAVFMGVYMRYIRPGRIGEISLIGVLLLLGSIWLGGQVAADPVWGK MFTFTGVQITWMLIGYGFVAAVLPVWLILAPRDYLSTFLKIGTIIALAIG ILITMPELKMPALTQFTDGTGPVWKGGLFPFLFITIACGAVSGFHALISS GTTPKLLDNEANARYIGYGGMLMESFVAIMAMVAASVIEPGVYFAMNSPA AIVGGDVVAVAQTVSSWGFAISPDQLQAVAKDIGENTILARAGGAPTLAV GIAQILHHVLPGENTMAFWYHFAILFEALFILTAVDAGTRAGRFMLQDLL GSFVPALKRTESWTANLIATAGCVALWGYLLYQGVIDPLGGINTLWPLFG ISNQMLAGIALMLGTVVLIKMKRQRYIWVTLLPAVWLLICTTTAGFIKLF DANPAIGFLSLAKKYSDAMANGQIIAPAKDITQMQHVIFNAYTNATLTAL FLLVVFSILFYALKVGIAAWGSKERTDKESPYQAVPDA >PFL_2596 dksA, RNA polymerase-binding protein DksA, putative MTKEKLLAMPADDYMNAEQHAFFSDLLQAMKVETHERIEQNRIAIESLDT PADPADAASVEEERTWLVNAIDRDQRMLPQLEQALGRISDDSFGWCDDSG EPIGLKRLLISPTTKYCIEAQERHEQIDKHQRQA >PFL_5270 dksA, RNA polymerase-binding protein DksA MPTQAKQQIQSISGFEPYVETAGEEYMGKPMREHFTKILNKWKQDLMQEV DRTVDHMKDEAANFPDPADRASQEEEFSLELRARDRERKLIKKIDKTLQL IEDEEYGWCESCGVEIGIRRLEARPTADMCVDCKTLAEIKEKQVGK >PFL_2292 fecR, sigma factor regulatory protein FecR MSFAGLQLSVGERQAISGAARWYAQLRSGSASEQEQAAWREWLAADPLHR QAWERMQQLGEQMSALPGGLAGSTLRGAGRSRRELMRNLVVLASAGSLGW LGWRSDSAQQLLADYRTQIGERRQVRLADGTSLLLNTNTSINVQFDSQQR KVQLLWGEMLVSTAADPLQRPFRVFTRDAEVLALGTRFVLRSDEREEQVA VLEHAVQVSLGAGLAPRRVEAGQQLAFSAGGFAALRPNDAAVGAWRQGSI IAIDRPLGELLADLSRYRRGVVQCDPQIAGLKISGAFPIDDTDRALAALE SGFSLQIKRYTRYWVRVCDSRVG >PFL_1634 fleQ, sigma 54 dependent transcriptional regulator FleQ MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVGSLSSSR EVICVLIGTVNAPGALLGLLKTLSTWDEFLPVLLMGENSSIDLPEDQRRR VLSTLEMPPSYSKLLDSLHRAQVYREMYDQARERGRHREPNLFRSLVGTS RAIQHVRQMMQQVADTDASVLILGESGTGKEVVARNLHYHSKRRDAPFVP VNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGGTLFLDEIGDM PLPMQVKLLRVLQERTFERVGSNKTQGVDVRIIAATHKNLESMIEVGSFR EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAI MSLCRHGWPGNVRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQL VDSLRSDLEERVAINGHAPDFAATAMLPPEGLDLKDYLGSLEQGLIQQAL DDANGIVARAAERLRIRRTTLVEKMRKYGMSRREGDEQADD >PFL_1636 fleR, sigma-54 dependent DNA-binding response regulator FleR MAIKVLLVEDDRALREALADTLLLAGHDYKAVGSAEEALEAVAAEPFSLV VSDVNMPGMDGHQLLGLLRARQPQLPVLLMTAHGAVERAVEAMRQGAADY LVKPFEPRALLDLVARHALGGLGVGEDEGPVAFEPASAQLLELAARVARS DSTVLISGESGTGKEVLARYIHQHSHRVNQPFIAINCAAIPDNMLEATLF GHEKGSFTGAIAAQPGKFEQADGGTILLDEISEMPLGLQAKLLRVLQERE VERVGARKPITLDIRVVATTNRDLAGEVAAGRFREDLYYRLSVFPLAWKP LRERTADILPLAERLLAKHVNKMKHAAARLSAKAQECLLAYPWPGNVREL DNALQRALILQQGGLIQPEDFCLAGPVACAPLPALAPVVQMAARGTAAEV EVPAQESGGLGDDLRRREFQMIIDTLRSERGRRKEAAERLGISPRTLRYK LAQMRDAGMDVEAYLFAT >PFL_1635 fleS, sensory box histidine kinase FleS MPQAAQMSPAPDTQGQSSSVEQASRLGLEQAFALFNQMSSQLTDSYSMLE ARVTELKGELAVVSAQRMQELAEKERLANRLQNLLDLLPGGVIVIDGHGI VTEANPAACELLGLPLEGQLWRNIIARSFAPREDDGHEISLRDGRRLSIA TRSLDAEPGQLVLLNDLTETRHLQDQLARHERLSSLGKMVASLAHQIRTP LSAALLYASHLTEQELPVATHQRFAGRLKERLHELEHQVRDMLVFARGEL PLTDRLTPKSLLQSLQAAALTHVQDVAVRWQCDSHHGELLCNRDTLVGAL LNLIENAVQASAGAARLKVHLYSRGDTLRLCISDSGSGIDAAVLERLGEP FFTTKANGTGLGLTVVKAVARAHQGELSLRSRPGRGTCALVTLPLFSSVH GVE >PFL_3563 gacA, response regulator GacA MIRVLVVDDHDLVRTGITRMLADIDGLQVVGQAESGEESLLKARELKPDV VLMDVKMPGIGGLEATRKLLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAG YLTKGAGLNEMVQAIRLVFAGQRYISPQIAQQLVFKSFQPSSDSPFDALS EREIQIALMIVGCQKVQIISDKLCLSPKTVNTYRYRIFEKLSISSDVELT LLAVRHGMVDASL >PFL_4451 gacS, sensor protein GacS MLKKLGIKGRVLLLTLLPTSLMALVLGGYFTWMQLSDLQTQLLQRGEMIA EQLASLVAPAMGNHNTQMLERIATQALEQQDVRAVSLLAPDRSLLAHAGP SMLNPPPAGNSSHMMQRSGSDATRYQLPVFGRHRNLAGDLIPDESDRLLG WVELELSHSGMLLRGYRSLFASLLLIAAGLAGTALLAVRMGRTINNPLTQ IKQAVAQLKDGNLETRLPPLGSQELDELASGINRMASTLQNAQEELQHSI DQATEDVRQNLETIEIQNIELDLARKEALEASRIKSEFLANMSHEIRTPL NGILGFTHLLQKSELTPRQLDYLGTIEKSADSLLGIINEILDFSKIEAGK LVLDSIPFNLRDLLQDTLTILAPAAHAKQLELVSLVYRDTPLSLVGDPLR LKQILTNLVSNAIKFTREGTIVARAMLEEEHEDSVQLRISIQDTGIGLSN QDVRALFQAFSQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDSTPGE GSEFWISLNLPKTRDDAEDLPGPPLLGRRVAVLENHELARQALQHQLEDC GLEVTPFNTLEALTNGITGVHQSEQAIDLAVLGITTNDMSPERLSQHIWD LEHLGCKVLVLCPTTEQTLFHLSVPNPHSQLQAKPACTRKLRRALSDLVT PRRARSEPEETLSSRAPRVLCVDDNPANLLLIQTLLEDMGAKVLAVDNGY AALNAIQTEPFDLVMMDVQMPGMDGRQSTEAIRQWESERHGTPLPIVALT AHAMANEKRALLQSGMDDYLTKPISERQLAQVVLKWTGLALRNQGPERAS ERPELGLELQVLDQDEGLRLAAGKADLAADMLAMLLASLDADREAIKAAR AANDQNALIERVHRLHGATRYCGVPQLRAACQRSETLLKQEDAKAFAALD ELDHAIGRLAAEARTNA >PFL_0510 glnE, glutamate-ammonia-ligase adenylyltransferase MSLPALAPVPAILLPLVSRAEQSLRGAVAALEGDPGLADWSTERWAEFAR VGAASDFVIEQSLRDPLMLLELVRSGELDRPFAPGELCAQIAAAVQAAES EDQLGRVLRRQRTRQQVRIIWRDLTRQADLVQTCRDLSDLADACIDQAYQ WLYLRHTQQFGVPTGGRSGEPQQMVILGMGKLGAVELNLSSDIDLIFAYP EGGETVGVKRPLDNQEFFIRLGQRLIKALDPMTVDGFVFRVDMRLRPYGS AGALVLSFNALEQYYQDQGRDWERYAMIKARVVAGDQAAGAQLLDMLRPF VYRRYLDFSAIEALRTMKQLIQQEVRRKGMADNIKLGSGGIREVEFIAQA FQLIHGGRDLSLQQRPLLKVLGTLEGQGYLPPAVISELREGYEFLRYTEH AIQAIADRQTQMLPDNPQDQARIAFMLGFADWNAFHEQLMHWRGRVDWHF RQVIADPDEDEGAESEVVVGGEWLPLWEEAQDEEAACRQLQEGGFVDAPK ALRALAGLRGSPQLRAMQRLGRERLDAFIPRLLAQAVEHANPDLVLERVL PLVEAVARRSAYLVLLTENPGALRRLLTLCAASPWIAEQITRFPLLLDEL LNEGRLFKPPLAPELAAELRERLTRIPEDDLEQQMEALRHFKLAHRLRVA ASEIAGSLPLMKVSDYLTWLAEAILEQVLALAWRQTVSKHGAPLRTDGTL CDPGFIIVGYGKVGGIELGHGSDLDLVFIHDGDPQAETDGPKPIDGAQFF TRLGQRIIHLLTTQTNSGQLYEVDMRLRPSGASGLLVSSLGAFARYQENE AWTWEHQALVRARVLVGSQDVGQAFEKVRAAVLGKKRDLPKLRQEVSEMR AKMRDNLGSRLTAAGTAANAFEATAPFDLKQDAGGIVDIEFMVQYAALAW SEEHPSLLRYTDNIRILEGLEQVGLMPASDASLLREVYKAYRSAAHRQAL QNEAGIITGDQFVTERREVLRIWRELGLS >PFL_0377 glnG, nitrogen regulation protein NR(I) MSRSETVWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMSRLARQAPD VIISDIRMPGASGLDLLARIREQHPRLPVIIMTAHSDLDSAVASYQGGAF EYLPKPFDVDEAVSLVKRANQHAQEQQGLEVAPTLARTPEIIGEAPAMQE VFRAIGRLSHSNITVLINGESGTGKELVAHALHRHSPRAASPFIALNMAA IPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGTLFLDEIGDMPADTQ TRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGKFREDLFH RLNVIRIHIPRLSDRREDIPTLARHFLSRAAQELAVEPKLLKNETEEYLK NLPWPGNVRQLENTCRWITVMASGREVHISDLPPELLSLPQDSAPVTNWE QALRQWADQALARGQSNLLDSAVPSFERIMIETALKHTAGRRRDAAVLLG WGRNTLTRKIKELGMKVDGGDEDEGEEG >PFL_2282 glnH, amino acid ABC transporter, periplasmic amino acid-binding protein MHTRTRVLAPAVFAFCCALGLGLSASAQAEPLYKVGATATGIPFTFLDVK SQSIEGMMIDAARAVGKAGGFAVDIQQTTFAALIPSLTSNKIDIISAAML RTPVREKVVQYSDPVFSYGEGLIVKADDASDYRRMEDLAGETVGAQVGTV FIDELNKRGIFKEVRGYDSIPDLMRDLALGRIKAGFADRPILAYQLAQGT QNKVRLVKGYQPVVMGDVCLIVRKGDAQTLAEVNRGIAVIKADGTLDRII EHWKLN >PFL_2360 glnH, amino acid ABC transporter, periplasmic amino acid-binding protein MLTRTLKGLLAASTVAAAALLCPAAAQADDLQSIRESREIRIAMSGQYSP FSFANEQNQIVGFDASISEALAQRLGVKVSIVTTPFDGIIAGLLAKKYDA IIASMTITPERLRAVDFVGPYYHAGRTIVVKEDSPINSLADLKDVTVGVT LGDAHDKWARARGNLKVKTYKGLPEMLVDLEAGRLDALVMDSVPVLVAVK ETGQKVRIITPPDSDGGVEGMGIALRKNNPELKAAMQQALNDMLADGSYE KISMKWIGKDIR >PFL_0415 glnH, amino acid ABC transporter, periplasmic amino acid-binding protein MKKYLSLLLAGATALLAVNTAQAGAIDDAVKRGTLKVGMDPTYMPFEMTN KRGEIIGFEVDLLKAMAKSMGVKLEMVSTGYDGIIPALLTDKFDMIGSGM TLTQERNLRLNFSEPFIVVGQTLLIRKDLEGTIKSYKDLNSADYRITSKL GTTGEMVAKKLIAKAKYHGYDNEQEAVLDVVNGKADAFIYDAPYNVVAVN KVGNGKLVFLDKPFTYEPLAFGLKKGDYDSINFINNFLHQIHEDGTYDRI HDKWFKSTEWLKDME >PFL_6153 glnH, amino acid ABC transporter, periplasmic amino acid-binding protein MNFKPLLALGLTVLAASSQAFAGATLERIEQKKELVGVLMESYPPFSFLN EQNQLDGFDVDVAKAVADKLGVRLRLETPSWDVIAAGRWSGRYDICICSM TPSKARAEVFDFPVQYYASPAVIVVNAKDERIHGAQDLSDKKVGLTAASS YEGYLNKNLVIEGAEDTHLQYPFENVQIAPYDTDNVAFQDLGLGPGVRLD AILTNLVTAQPRLTQDSRFKLAGEPLYAEPNSVAIEKGDAQWNAKVREVF AQLKQDGTLSKLSQKWIGADISQ >PFL_0378 glnL, nitrogen regulation protein NR(II) MTISDPLHRLLLDNLTTATILLNADLRLEYMNPAAEMLLAISGQRSHGQF ISELFTESAEALSSLRQAVEQAHPFTKREAMLTALTGQTLTVDYAVTPIL SNGDTLLLLEVHPRDRLLRITKEEAQLSKQETSKMLVRGLAHEIKNPLGG IRGAAQLLARELPEESLKDYTNVIIEEADRLRNLVDRMLGSNKLPSLALT NIHEVLERVSSLVEAESQGCITLVRDYDPSIPDVLIDREQMIQAVLNIVR NAMQAISSQNEMRLGRITLRSRTMRQFTIGHVRHRLVSKIEIIDNGPGIP AELQDTLFFPMVSGRPDGTGLGLAITQNIISQHQGLIECDSHPGHTTFSI FLPLEQGAPST >PFL_4620 gltR, DNA-binding response regulator GltR MSSVSKSILLVDDDQEIRELLETYLSRCGFQVRSTADGAGFRLALNEAPS DLVILDVMLPDEDGFSLCRWIRQHPKRSQVPIIMLTASSDEADRVIGLEL GADDYLGKPFSPRELQARIKALLRRVQFTQERVVGEVLCFDEWRLDVISH RLFHNDGEEVILSGADFALLKLFLDHPQEILDRDTIGNATRGRDLMPLDR IVDMAVSRLRQRLRDTEKPPRLIRTVRGSGYQLAANVVAGSGH >PFL_4570 kdpD, sensor histidine kinase KdpD MPPRDGRPDPDALLEKLQQEEQAAQRGKLRIYFGSNAGVGKTCAMLTAAR NEVAQGRDVVAGVVETHGRRETAELLQGLQVLERHRLMHRDYALPEFDLD AALARHPAVLLVDELAHSNVPGSRHPKRWQDVEELLRAGIDVWTTLNVQH LESLNDIVSGIIGIRVRETVPDHLFDEAHEVLVIDLPPDDLLRRLKDGKV YLGPQAERASRHFFRKGNLLALRELTLRRTADRVDAQMRDYRRERSINAL WPARERLLVGIAGDPADERLVREAARLAQKLEADWMVVHVASAQRRGAGA ARYAAAMKTLALAAEFGAETATLPGMDVAEALVACAREHNANRLVLGHYP RKVWQFWHQSVSDRISRQHPEIDQIVIANGPLSRRPAPVDKPEAGLPPSR APAYLWASLACFAATAVAALLLKVFDPANVVMLFLLTVVLVALRYGRGPG VWAAMLAVLCFDFFFVQPVWSFTVNDTQYFFTFALMLGIALITGQLTARL RHEARTAAAGERRATSLAGLARELSAALTEEQICAVALRTFSGVFEARVG LALPDAENRVRALSANTLAIDESIAQWAYDHDQPAGRGTDTLAAAKGCYL PLKAPMRVRGVLVLEAEDAERLKEPEEQRLLEACMSQLAIALERVHYVEV AQSTVLQMEGERMRNTLLAAISHDLRTPLTTIIGAADAALPHAAQGPLKH LLAGIHDQASSMQRLIENLLDMARMQERGVRLNRQWNSLEEIVGSALRQL REPLAGHQLRVAMAPQLPLVEVDALLLERVLVNLLDNAAKYTPAGTLVQI SARQVDQQIILQVSDSGPGCPKGSSPASLFEAFSRGQQESAVAGIGLGLA LAKRIVEAHGGRIEAQPHADAGLSFVITLPAGQPPSMETL >PFL_4294 kdpD, sensor histidine kinase KdpD MSDSGRADALLAELPRDGRGRLKVFLGAAPGVGKTYAMLQAAHSQLRQGV KVLAGVVETHGRAETEALLSGLPQQPLVRSEYRGVLLEEMDLDGLLKAKP KLVLVDELAHSNAPGSRHAKRWQDIQELLAAGIDVFTTVNVQHLESLNDQ VRGITGVQVRETLPDWVLQEAYELLLVDLPPRELLERLRDGKVYVPEQAR AAIDAFFTQTNLTALRELAMQTAAAQVDNDLAQGYRQLGQAAPAVRGRLL VGIDGDAQAERLVRHASRVAQRRHLPWSLVHVDNGRLRDEQARLRLQAAQ QLAERLGGEVVLLRAGEVAKTLIQHAAERRASLLLVGQSRRRWRRRWFGG GLAARLLRNADGLEINVLDSEPQPHQPGLRVKHSLIWFDYVLAVLATLLA SALAWGVASVLPLPNISLVFLAAVLLVAVRSSLGPALACAALSFLSYDFL FIPPNFSLAIQREEDVLTLLFFLLMAALTGNLAARQRRQLQALRDTQEET GELLDLSRKLTAATDRQAVISAAAQHLNGRDELRVCLINRDGQGGWKVET GGSPQFSEAERAAADWAWQHDQPAGLGTGTLPFGRWWWWPLSVDDGPLGL LGVCPREGEEFSGQRRRLLTALSQPLAQALARARLAEDLEAARLHGETEQ LRSALLASVSHDLRTPLTSMRGSIDSLLALGEAIPLEDRRELLEGTRDEA ERLDRYIQNLLDMTRLGHGALKLARDWVAPGDIVGSALNRLRAVLAPLQV ATELPADLPLLYVHAALIEQALVNVLENAARFSPLQGHLQLKVSASEQEL SFAVSDEGPGIPEDERAKIFDMFYTAARGDRGGQGTGLGLAICQGMVGAH GGHISVAEGIGGKGTCITLHLPLQTQPELESDL >PFL_4293 kdpE, KDP operon transcriptional regulatory protein KdpE MSQTATILVIDDEPQIRKFLRISLASQGYKVIEAGTGTEGLAQAALNKPD LLVLDLGLPDMDGQQVLREFREWSAVPVLVLSVRASELQKVEALDGGAND YVTKPFGIQEFLARIRALLRQAPSGEVQEAALQVGPLTVDLAYRRVLLDG VEVALTRKEYAVLAQLARHPGRVITQQQLLKDIWGPTHTEDSHYLRIVVG HLRQKLADDPTRPRFIVTEAGVGYRLLGADS >PFL_4569 kdpE, KDP operon transcriptional regulatory protein KdpE MSSARILIVEDEANIRRFVGIALEDEGFQVFEADSVKRALIHAASRQPDL VIVDLGLPDGDGKQLISELRGWLAVPILVLSARDREDEKVAALDAGADDY LVKPFGVPELLARIRAQLRRHGQSGTAAATSKVAFGAIEVDLATHEVRRE GLPVHLTPIEYRLLCALIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHM AHLRQKLEADPAQPQHLITELQVGYRLVGL >PFL_0090 kinB, alginate biosynthesis sensor protein KinB MKLAMKLRTRLFLSISALITVALLGLVLGLVSVMQMASTQESLIRNNFIT LDLGLKLRQTLGDQLIIMLGKQPDRAALETSRQHYLELLDEGIAHDRQTQ VQSGFQQARSDYLSFYQAFERNSTASGLHDNNELTERFNALRGGLINEHK RALDNISQVEQQARNRAWLVAGLLGLVALAVLIIGFVTAHAIARRFGGPI EALAKAADKIGEGNFDVTLPISAAAEMNLLTRRFGIMAEALRQHQATNVD ELLAGQQRLQAVLDSIDDGLLMIDRQGRLEHLNPVAQRQLGWDQERLGQG LGSALQRPELDEQLQLVLRGGNLERAPDDLDIEVDGESRLLTYSLTPVSH TQGHILGAVMVLHDVTEQRAFERVRSEFVLRASHELRTPVTGMHMAFGLL QERLHFPEESRETDLLNTVNEEMQRLMQLINDLLNFSRYQNGLQKLTLAP CPLEELLVQAQGRFSEQAQQQGIDLLLEIQAPLPRLHADRAQLERVLDNL IDNALRHTASEGQIRLQARRHGERVIVSVEDNGEGIAYGQQGRIFEPFVQ VGRKKGGAGLGLALCKEIVQLHGGRMGVYSRPGQGTQFYLALPL >PFL_3700 lexA, LexA repressor MTTLSPRRSAILTFIRERIADHGQPPSLAEISQAFGFASRSVARKHVLAL TEAGFIEVNPHQARGIRLLNQPRRPELLEIPVLGRVAAGAPIGVDADIHG QLLLDPGMFSRTPDYLLRVQGDSMIDDGIFDGDLVAVRRSSEVRNGQTVI ARLDGEVTIKRFERKGQGIRLLPRNPAYQPIEVTADHELFIEGVFCGLVR QG >PFL_1949 lexA, LexA repressor MLKLTPRQAEILAFIKRCLEDNGYPPTRAEIAQELGFKSPNAAEEHLKAL ARKGAIEMTPGASRGIRIPGFEAKADDTLPIIGRVAAGAPILAQQHIEES CNINPTFFHPRADYLLRVHGMSMKDIGIFDGDLLAVHTTREARNGQVVVA RIGDEVTVKRFKREGSKVWLIAENPEFAPIEVNLKDQDLVIEGLSVGVIR R >PFL_5345 morA, developmental regulator MorA MFNVTSPKPARAAAPGPAYPMRGTLKGALATLVLLLLALLFWQLLDQLQQ TRQDQRQHAIDYSADLADHLSLNLALNAQIALNLLPIIEAPQDSQQQQQL LQKLQRSLPDVRSFALLDSKGQILSDSATDSQDALWLAELVQRSRAQRYY YSNPADGSVVHVLLHQSSGGSRGYWVLRLAPSFLQTLVRQSEEGFKPTWV IENRLSHQVIKRDERSTSTPGMLDPDEMASSVLLVPLSNSDWQLRGLFDQ RAVLEALLPAFIGKCLLGLAFSLLPVIALLNMRRRQRQLHEGRRRYQDIF EGTGVALCVMDISGLPGLLDKHNLHNSDQLKRWQASDPGHRLQLLSELRI TEVNQVALRLLNVESSEQAWQLLIEGSPKNGNAIGSQLLEAVINQQKQLE LEIKLSDAQGNDQHLWLVLRLPEAIADYSAVILSISDITSRKLIELSLLE REGFWSDVVRTVPDHLYVQDVISQRMIFSNHHLGQTLGYNKTELHQMGEY FWEILLHPEDADLYHRLRQEQRHSAYAQLLQCQLRFRHRSGQWRRFEIRE QALARDRYDQVTRIIGVAKDITDQIEASESLRDSEQRYRMLAESISDVIF STDSKLSLNYVSPSVHAVLGYDVEWIFQNGWQSTIANPQQLSGIYTLMDR VSKALDKPEQLAQLRSQVQTQLFLFDCLRADGRKIPIELRLVLVWDEHGA FEGVLGVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEA FSRVSGYAVSQVLDQLPNMLTVDDQQEAHLRYVLKQLNQHSTWEGEVWLK RRNGEHYPAWVGITAVLDDEGDLASYVCFFSDISERKASEQRIHRLAYYD ALTHLPNRTLFQDRLHTALQSAERQKSWVVLMFLDLDRFKPINDSLGHAA GDRMLKEMATRLLGCVDDDDTVARMGGDEFTLLLQPRSSREMALNRAIHV AEQILASLVKPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYH AKERGKNNFQFYQADMNASALERLELESDLRHALEQEEFVLYYQPQFSGD GKRLTGAEALLRWRHPRRGLVPPGDFIPVLEELGLVVDVGDWVISEACRQ LKSWHQAKVRVPKVSVNISARQFSDGQLGMRIATILKDTGLPPACLELEL TESILMREVSEAMQILDGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLK IDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREH GCDEVQGYLFGRPMPANRFEAQFSNDALFMFD >PFL_1449 mucA, sigma factor algU negative regulatory protein MucA MSREALQESLSAVMDNEADELELRRVLNAVDEVETRETWARYQIARAAMH KELLLPRLDIAAAVSAALADEAVPAKASRGPWRSLGRLAVAASVTVAVLA GVRLYNQDEIAGVELAQQTGQPTLATPQVKGPAVLAGYNESSEATGPMAN GVLQGQPGWHDQRLPSYLRQHAQQAALKGTESALPYARAASLENR >PFL_1450 mucB, sigma factor algU regulatory protein MucB MRAIPLLTLLLSGWFVVPAHADEAQDWLQRLGQAEQQQSFQGTFVYERNG SFSTHNIWHRVQDGKVRERLIQLDGSAQEVVRVDGRTQCVSGELVAGLGD SPDGAARALDPQKLKNWYNLAVIGKSRVAGRQAVIVSVTPKDQHRYGFEL HLDRETGLPLKSLLLNDKGQLLERFQFTRLDTADVPDDVELRPSAGCKPV SLDSDKASAVKTVQTWHSDWLPPGFELTSSSARKDPETKSMVNSLLYDDG LARFSVFLEPLNGATVTDTRTQLGPTVAVSRRLTTPDGEMMVTVVGEIPI GTAERIALSMRSDTTAKQ >PFL_0276 ompR, DNA-binding response regulator OmpR MSSTVQTAEGEKILIVDDDPGLSSLLERFFVSKGYRARAVPNTEQMDRLL GREVFNLVVLDLMLPGEDGLTACRRLRSANNQIPIIMLTAKGDELSRIKG LELGADDYLAKPFNPDELMARVKAVLRRQSAPVPGAPGSEDESVTFGDYE LSLATRELKRGNEVHMLTTGEFAVLKALVMNARQPLTRDKLMNLARGREW DALERSIDVQISRLRRMIEPDPSKPRYIQTVWGVGYVFVPDGTATK >PFL_2665 pfeR, transcriptional activator PfeR MTPNLLLVEDDARLRDDLDLHFRQRGFTVTTCTDGRQGLAAVRAGHFDLV LLDIMLPGMDGLALLETLRQEQGTPVMLMSALGAEQDRITGFTRGADDYL PKPFSLAELDARADALLRRMARVQQLQATRQDPHLSFDDQAQDVLHQGRA AGLTGSEYRLLATLREHPGETLSKPFLYQHVLHRIYTRLDRGLDVHVCNL RRKLADLGVQHLQIQAVRGAGYILVEAERH >PFL_2664 pfeS, sensor protein PfeS MRRHPLLWKLALLQIGFCLLLTWIIWTWGLSAERSTYFLDPADRQYLASY AQQAEHAWRQGGVAAVDEFQRQLATREDTWVAVIGDRLQSLGSTPLTAEE ASHLTFMRKLDWPMSRRLQDELPYVSIEFPEHPEQGRLVLQLPERLLPSG LTPWTHVLSHGVVPTLLAALLGLLLYRHLVLPLNRLRDRADALRADDLES QGLGTPLVNRHDELGELALAFEHMAERLRQSLAQQRLLLRTLSHELRTPL ARLRIAHDSRLPPEQLRQRLDREIADMQRLLEDTLDLAWLDTERPQLPTE AVQVLSIWEALRQDACFESAWDAERLPCLLDAECRVQVHLDSIAQALENL LRNAIRYSPAGGRVSLRGWREGGYWHLCLEDQGPGVAEQDLQRIFQPYQR LDSAQGDGFGLGLAIARRAVELHQGRIWASNGHPGLCMHLLLPAA >PFL_6108 phoB, phosphate regulon transcriptional regulatory protein PhoB MVGRSILIVDDEAPIREMIAVALEMAGYDCMEAENSQQAHAIIVDRKPDL ILLDWMLPGTSGIELARRLKRDELTGDIPIIMLTAKGEEDNKIQGLEVGA DDYITKPFSPRELVARLKAVLRRAGPTDGEAPIEVGGLLLDPISHRVTID GKPAEMGPTEYRLLQFFMTHQERAYTRGQLLDQVWGGNVYVEERTVDVHI RRLRKALGDAYENLVQTVRGTGYRFSTKA >PFL_1027 phoH2, PhoH-like protein MDDHGRSSSSNQPILYVLDTNVLIHDPNALLNFEEHHVAIPMTVLEELDK LKSGHHSVAAECRQAIRLIDKTLGEASPEDVELGVPIQRGKSGPKGLLSI LMSKRNEPTSLLPDNLNDNIIINQLIDLHARNKDLPVVLVTKDINMRLKA RACGIAAEDYSTDQLVDDVSLLPNGFHNMSGSFWDRVSKVETRQDHGRTW HQVQLIDNLPAVHINEFIIDEQGFVGWIKEIRADVLLILDLHQEPLLHQE AWGLKPRDIYQGLALYALLDPDIHLVNLSGAAGSGKTILALAAAIEQTMV SKRYRRIIATRSVQGLDQEIGFLPGTEAEKMEPWLGAITDNLEALHMDDE NTHGSVDYILSKVPLQFKSLNYIRGRSFQQSLILIDECQNLTPHQMKTII TRAGAGSKVVCLGNLAQIDTPYLSATSSGLTYLTERFKDFPNGVHITLQG VPRSILAEYAESHL >PFL_4470 phoP, DNA-binding response regulator PhoP MKLLVVEDEALLRHHLQTRLTDSGHVVESVANAEEALYQTEQFNHDLAVI DLGLPGMGGLDLIRQLRNRGKTFPILILTARGNWQDKVEGLAAGADDYVV KPFQFEELDARLNALLRRSSGFTQSTIIAGPLLLDLNRKQASLDEQPLAL TAYEYRILEYLMRHHQQVVAKDRLMEQLYPDDDERDPNVIEVLVGRLRRK LEGPSGFKPIDTVRGLGYLFNERCR >PFL_4469 phoQ, sensor protein PhoQ MIRSLRLRLMLAATTLAVLFMLALLPAMQGAFSLALQDSIEQRLASDVTT LISAARIENNRLQMPAQLPDERFNLADSRLLGYIYDREGHLVWRSRATQE ENINYRPRYDGRGNEFARIREANGQEFFVYDVEIKLLGGKSAAFSIVALQ PVREYQQTLEGVRENLYLGFGAALLVLLALLWLGLTWGLQALRRLSQELD QIESGTRQSLSEEHPRELLRLTGSLNRLLQSEREQRSRYRDSLDDLAHSL KTPLTVLQGVSEDMAQRPQDREQAWVLQAQIERMSQQISYQLQRASLRKS GLVRHQVRLRPVLQSLCDTLDKVYRDKQVRVSFDLPERCYLPIEHGALLE LLGNLLENAYRLCLSSVRISVRETLEGSELCVEDDGPGVPPDQRARILQR GERLDRQHPGQGIGLAVVKDIIESYGAQLTLGDSALGGAAFRIHFPAL >PFL_6109 phoR, sensor histidine kinase PhoR MNQNWHGTLIRHMLLLITGCLLVGLISGYYGWSLAAGLGIYLAWTLKQLL RLHEWLRLHQPDEAPPDGYGLWGEVFDSIYHLQRRDQRVRGRLQAVIDRV QESTAALKDAVIMLDSDGNLEWWNRAAETLLGLKTPQDSGQPVTNLVRHP RFKEYFEQDSYAEPLEIPSPANDRVRIQLYITRYGNNEHLMLVRDVTRIH QLEQMRKDFIANVSHELRTPLTVICGYLETLLDNVEEVNPRWSRALQQMQ QQGGRMQTLLNDLLLLAKLEATDYPSDNQPVPIDVLLQSIKSDAQALSGE RNQRITLEADASVQLKGSEAELRSAFSNLVFNAVKYTPAEGNIRIRWWGD EQGAHLSVQDSGIGIDNKHLPRLTERFYRVDSSRNSNTGGTGLGLAIVKH VLLRHRARLEISSVLGHGSTFTCHFVPAQVKKNRTQSLTDQR >PFL_5827 pilG, type IV pilus response regulator PilG MEQHSNALKVMVIDDSKTIRRTAEMLLKNVGCEVITAVDGFEALSKIVDH HPGIIFVDIMMPRLDGYQTCALVKNNSAFKSIPVIMLSSKDGLFDKAKGR IVGSDQFLTKPFSKEELLSAIKAHVPDFVALAPQ >PFL_5826 pilH, type IV pilus response regulator Pilh MARILIVDDSPTEMYKLTGMLEKHGHEVLKAENGADGVALAREEKPDAVL MDIVMPGLNGFQATRQLTKDAETSHIPVIIITTKDQETDKVWGTRQGAKD YLTKPVDEETLIKTLNNVLAG >PFL_5825 pilI, type IV pilus biogenesis protein PilI MSQSQTAFELLLEIDQRCRLLAADLPSQETRQHSWSGIGFRLGEHWYVAA MGEISEVLHEPRYTLLPGVKPWVKGVANLRGRLLPIMDLCGFFGHELSPL RKQRRVLVVEYKELFAGLLVDEVAGLQHFAQDSLEPGITDFADAAVNPYL QGQFRRDQVWQVFSPFALARSPGFLEVAA >PFL_5824 pilJ, type IV pilus biogenesis protein PilJ MTKAKTGKPLEGSRSRSQIIVLFIALIVFIMLLFANFAYLNTQATYDKQY IGHAGELRVLSQRIAKNATEAAAGKAAAFKLLGDARNDFARRWGYLKKGD PDTGLPGAPVALRQEMRAVQLDWEKLLKNTDAILASEQTVLSLHQVAATL AETVPQLQVEYEKVVEILLQRGAPAAQVAMAQRQSLLAERILGAVNTVLA GDENAVQAADAFGRDAARFGQVLNGMLQGNPGLKISQVEDPDARGRLAEI SELFEFVSGSVDEILETSPELFQVRESASNIFSLSQTLLDEASLLASGFE NLAGSRKLDTIGGYVLGLLALASIILIGLVMVRETNRQLRETAEKNERNQ NAIMRLLDEIEDLADGDLTVTASVTEDFTGTIADSINYSVDQLRDLVATI NLTAGQVAGAVQETQATAMQLAEASEHQAQQISEASTAINEMAQSIDQVS ANAAESSAVAERSVEIANKGNEVVHNTIHGMDNIREQIQDTAKRIKRLGE SSQEIGDIVSLIDDIADQTNILALNAAIQASMAGDAGRGFAVVADEVQRL AERSSAATRQIETLVRAIQTDTNEAVISMEQTTTEVVRGARLAQDAGVAL EEIEGVSKTLAALIQSISNAAQQQTSSAGQISLTMNVIQQITSQTSSGST ATAESIGNLAKMASQLRRSVSGFTLPATRGPAPNDNR >PFL_3614 ptsN, PTS system, nitrogen regulatory IIA component MCPHRASARDLITSCPLRIPLSSQTSRRWATGAWRQRAGGWRSKEFVKSA RPPLPAPGKCASIACKPSLKLPEKPMSKVARYLQVEDILLAVNVTNKQRL FEQVGQHLQETRQLPADWVAASLWRRELAASTAIGEGVAVPHARLAELDR IHALYLRPQTAMAFAAPDQQPVSDILVLLVPAPADQQHLDLLADTARLFT NPRFRQALLRCTAPMQVKQLFDHW >PFL_0913 ptsN, PTS IIA-like nitrogen-regulatory protein PtsN MIRLESILTPGRSLVNVPGGSKKRALEQIANLISREVPDLEMQDVFESLI AREKLGSTGFGNGIAIPHCRLKGCESPISALMHLDAPIDFDAIDGAPVDL LFVLLVPEAATDAHLELLRQIASMLDRKEVRDRLRSATSNEALYQVVLDE QNGQ >PFL_5899 ptsP, phosphoenolpyruvate-protein phosphotransferase PtsP MLNTLRKIVQEVNSAKDLKAALGIIVLRVKEAMGSQVCSVYLLDPETNRF VLMATEGLNKRSIGKVSMAPNEGLVGLVGTREEPLNLENAADHPRYRYFA ETGEERYASFLGAPIIHHRRVVGVLVIQQKERRQFDEGEEAFLVTMSAQL AGVIAHAEATGSIRGLGRQGKGIQEAKFVGVPGSPGAAVGSAVVMLPPAD LDVVPDKHVTDIDAELALFKSALEGVRADMRALSEKLATQLRPEERALFD VYLMMLDDASLGSEVKAVIKTGQWAQGALRQVVTDHVNRFELMDDAYLRE RASDVKDLGRRLLAYLQEERQQTLVYPDNTILVSEELTPAMLGEVPEGKL VGLVSVLGSGNSHVAILARAMGIPTVMGLVDLPYSKVDGIQMIVDGYHGE VYTNPSDVLRKQFADVVEEERQLAQGLDALRDLPCITPDGHRMPLWVNTG LLADVARAQKRGAEGVGLYRTEVPFMINQRFPSEKEQLAIYREQLAAFHP QPVTMRSLDIGGDKSLSYFPIKEDNPFLGWRGIRVTLDHPEIFLVQARAM LKASEGLNNLRILLPMISGIHELEEALHLIHRAWGEVRDEGTDVPMPPVG VMIEIPAAVYQTKELARQVDFLSVGSNDLTQYLLAVDRNNPRVADLYDYL HPAVLQALQNVVRDAHAEGKPVSICGEMAGDPAAAVLLMAMGFDSLSMNA TNLPKVKWMLRQVSMTKAKELLAEMMTIDNPQVIHSSLQLALKKLGLARM INPASSKTL >PFL_2528 pupR, sigma factor regulatory protein PupR MHPSRRQPGLAVNHPLSSNANAEPQSIDIAMAEQAMQWQLDLQEPQVSAA TLAAWHRWRQAHPLHEKAWQRAETLAQRLQQVRSQGHSELARATLVPNLG RRRALKQLGLLLVTGAGAWAARDTALVQDWSADYSTRVGQQRRITLADQT RVQLNTDTAIALRFDREQRRIKLLRGELLLTLARQDSLPALHVETAEGWI ETSTARFSVRQLAGRTELSVYQGNLTLRPRDGGQPALSLGAGEQARFNRQ GLLLRQAQNATQPAWSQGMLVAQGQALAQFLEELGRYRHGHLGCDPSLAQ LKVSGTFPLADTDRVLFAVARTLQLEVRQFTRYWVTLKPRTALS >PFL_4446 relA, GTP pyrophosphokinase MVQVRAHQPINTDGSINLEAWLDHTVSVDMALDREALKEACEFAREAELQ HIATKNLSPEDVSSFSTGLEIAEILADLKLDQDSLVAAVLYRGVREGQIQ LPAVSQRFGPVVTKLIDGVLRMAAITASLSPRQSLVLGTQAQVENLRKML VAMVDDVRVALIKLAERTCAIRAVKSADEEKRNRVAREVFDIYAPLAHRL GIGHIKWELEDLSFRYLEPEQYKQIAKLLHERRLDRERFISDVMNQLQNE LKATGVNADISGRAKHIYSIWRKMQRKGLEFSQIYDVRAVRVLVPEMRDC YTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAVIGPEGKVLEVQIR THAMHEEAELGVCAHWKYKGTDVKSGSNHYEEKISWLRQVLEWHEELGDI GGLAEQLRVDIEPDRVYIFTPDGHAIDLPKGATPLDFAYRVHTEIGHNCR GAKINGRIVPLNYSLQTGEQVEIITSKHGTPSRDWLNPNLGYVTTSRARA KIVHWFKLQARDQNVAAGKTLLERELSRLGLPQVDFDKLAEKANMKIAED MFAALGAGDLRLAQLVNLAQQLVEPERGNEQLELIPRKAAGYKPGKRGDI QIQGVGNLMTQMAGCCQPLPGDAIVGYITQGRGVSIHRQDCASVLQLAGR EPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVSQVLLNERINVLAV NTRSNKEDNTALMSLTIEIPGLDALGRLLGRISQLPNIIETRRNRTP >PFL_3268 rpeA, sensor histidine kinase RpeA MLRILVRLYLITIIAFSAAIYLIPDLVIKVFHERFLDYNLDQSRGLQSLI VKQFRALPAQQWPTLVKEMDEEFHPLQVALVRIDDPDFSDYERERLQRGE KVVRLGDWGWRTLAVSPLDEQLAVKLVVPPDPLDVNLLYWSINVLIVAVL LACLLLWVRPHWRDLERLKRTAERFGKGHLGERTQLPASSNIGSLANVFD TMAGDIEKLLNQQRDLLNAVSHELRTPLTRLDFGLALALSDDLPAASRER LQGLVAHIRELDELVLELLSYSRLQNPACLPEQIEVSLDEFIDSILGSVD DELESDIVIDVLLHGALERFTLDPRLTARALQNLLRNATRYCEKRIQVGV LVSDDGCEIWVDDDGIGIPDDERERVFEPFYRLDRSRDRATGGFGLGLAI SRRALEAQDGTLTVEASPLGGARFRLSLPPPPRA >PFL_0925 rsbV-2, STAS domain protein MSESAVRLGDAGELLISGVLDYRSGPGLRKQGQALIKSSQAPALVLDCSA VEKSSSVGLALLLAFMRDGQALGKAVSVRALPEDMREIAEVSGVTEIFAH PQ >PFL_2302 rtcR, sigma-54 dependent transcriptional regulator RtcR MLINRLELIHGLDARDVSLAERVANDVRQVSPETEVRLHPMGLNNPWDFE EVYGALHDFTSAYPFDTEREDYLVHITTGTHVAQICWFLLTEARYLPARL IQTSPARRRDPDQHATGTHALIDLDLSRYDRIASRFAHKRLEGLAFLKSG IATRNPAFNRSIEQIERVAVRSRAPMLLIGPTGAGKSFLARRIYELKRGR HQVQGRFVEVNCATLRGDGAMSALFGHIKGAFTGAQNAREGLLRAADGGM LFLDEIGELGLDEQAMLLKAIEEKRFFPMGSDQEVQSDFLIIAGTHRDLR GRVAQGLFREDLYARINLWTFNLPGLAGRREDIEPNIDFELERHAREQGQ LVRFNLEARRRYLAFASSSEAAWLGNFRELSASITRMATLADSGRIDQAQ AEEEIQRLRHAWGLESQEDELQKLLGDDVELDLFDRLQLKAVIAECRRAD SLSEAGRRLFGVSRLGKANPNDADRLRKYLARFGLDWKQL >PFL_1743 sixA, phosphohistidine phosphatase SixA MKLWVLRHGQAESHAPTDAQRNLTAHGREEVLGSAAHLIGQPIAAILASP YVRAQQTAQLVREALGFEGEIRTVPWLTPEANPLQVLEQLDSADNLLLVS HQPLVGNLIGLLQHGHLRDPQPMNTASLAELEGDWPLAGLMTLNAVTHP >PFL_6063 spoT, guanosine-3,5-bis(diphosphate)3-pyrophosphohydro lase MPSIDALADRLSTYLGTDQVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPL AVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDGV SKLTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVL SGEKRRRIAKETLEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARIYQ AVKRARGNRKEIVNKIEESLSHCLAIDGIQGEVSGRQKHLYGIYKKMRGK RRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGRFKDYIAIPKA NGYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSSGDEQPK GTHARARQWVKGVLEMQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIME LPKGSTAVDFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGSTVEIVSAP GARPNPAWLNFVVTGKARTHIRHALKLQRRSESISLGERLLNKVLNGFDS SLEKVPAERIQAILQEYRLELIEDLLEDIGLGNRMAYVVARRLLGEGEQL PSPEGPLAIRGTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLDNCRN ISEIRHNPEKCIQLSWAKDVTGEFNVELRVELEHQRGLIALLASSVNAAD GNIEKISMDERDGRISVVQLVVSVHDRVHLARVIKKLRALTGVIRITRMR A >PFL_1441 tctD, DNA-binding response regulator TctD MRVLLVEDHLQLAESIAQALKSTGLTVDVLHDGVAADLALGSEEYAVAIL DVGLPRMDGFEVLARLRARGKNLPVLMLTARSDVKDRVHGLNLGADDYLA KPFELTELEARVKALLRRSVLGGERQQRCGVLAYDLDTRRFTLGEELLTL TSREQAVLEALIARPGRVMSKEQLASQVFGLDEEASPDAIEIYVHRLRKK LDGHAVAIVTFRGLGYLLESRDA >PFL_0388 typA, GTP-binding protein TypA MLIAASICQHTESSDRDTQVIENLRNIAIIAHVDHGKTTLVDKLLRQSGT LERNELNDERVMDSNDQEKERGITILAKNTAINWNGYHINIVDTPGHADF GGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIVVINKVD RPGARPDWVLDQIFDLFDNLGATEEQLDFKVVYASALNGIAGMDHTEMAE DMTPLYQSIVDNVPAPSVDRDGPFQMQISALDYNSFLGVIGVGRIARGRV KPNTPVVAIDVDGKRRNGRILKLMGHHGLHRVDVEEAAAGDIVCISGFDE LFISDTLCDPTAVEAMKPLTVDEPTVSMTFQVNDSPFCGKEGKFVTSRNI KERLDKELLYNVALRVEEGDSADKFKVSGRGELHLSVLIETMRREGFEMG VGRPEVIIREVDGVKQEPFENVTIDIPEDSQGKVMEEMGLRKGDLSNMVP DGKGRVRLEYNIPARGLIGFRNQFLTLTNGAGILTSIFDRYAPMKSGHMS GRQNGVLVSVETGKALTYSLETLQARGKLFVEHGQEIYNGQIVGLNSRDN DLGVNPTKGKKLDNMRASGKDETIALVPPVRFTLEQALEFIQDDELCEVT PKSIRLRKKILDEGERTRAAKKAKN >PFL_5619 vfr, cyclic nucleotide-binding transcriptional regulator Vfr MVAIAPTPKIKNLDKLLMHCQRRRYQAKSNIICAGDVSDSLYFIIKGSVT ILIEDDDGREMIIAYLNAGDFFGELGLFEEAGHEQQRSAWVRAKVECEVA EISYAKFRELSQNDPDILYVLSGQIAQRLRNTTRKVGDLAFFDVTGRVAR CLLELCKQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKDLEERNL VHVKGKTMVVFGTR >PFL_1135 wspR, response regulator WspR MNDLQLDEFKTDENAAMVLLVDDQAMIGEAVRRGLANEENIDFHFCADPH QAIAQAIRIKPTVILQDLVMPGLDGLTLVREYRNHPATQNIPIIVLSTKE DPLIKSAAFAAGANDYLVKLPDNIELVARIRYHSRSYMTLLQRDAAYRAL RVSQQQLLDTNLVLQRLMNSDGLTGLSNRRHFDEYLELEWRRAMREQSQL SLLMIDVDYFKTYNDTFGHLEGDEALRKVATAIREASSRPSDLPARYGGE EFVLVLPNTSPGGARLVAEKLRQTVEALKIPHIAPVEGASLTISIGLSTV TPQPNSHCRQLISAADKGLYLAKNNGRNQVGIE