Gene list
Applied filters:
COG category: Replication, recombination and repair
Gene type: CDS
Gene type: CDS
Gene type: CDS
Genomic element: chromosome 1
Number of genes found: 24
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View as list | ||||
# Photobacterium profundum, ss9 >PBPRA0051 Hypothetical protein MSSRPLKRVNYSIYLDPVNSNADRYAVGVMQGWAKDRKEMMSDPSAGVAL HYSLHMHKNIYLAGMFLYLLSPALSNALAGSLTEERIKIDTLEQQLENCG LALPSTKPSLPALDTHALIDELKAAVNMKSLMDEIQQIKAGLVESNTVTA AVQNGLSESDIAALQQNLAAEIKAHSQHREIAELKALLKTQNQLIKSLSN GQPLPEVEKSEPELDLSQQIANIQKVKKKGIF >PBPRA0206 putative formamidopyrimidine-DNA glycosylase MPELPEVEVSRMGITPHMVGQTVTKIIVRNPKLRWPIPEEIQQIEGQVIR KVTRRAKYLLLHTDVGYAIVHLGMSGSLRILPASIPPEKHDHVDLVLSSG EVLRYNDPRRFGAWLWGLPDLDHKVLSQLGPEPLSNDFTAEYLQERAKGK RTAIKQFIMDNKVVVGVGNIYANESLFSAGIHPKRAAGEISPEKIALFVD EIKSVLAFAIEQGGTTLKDFKNADGKPGYFAQELQVYGKGGKPCPRCDNP LSEMKIGQRASVFCSECQK >PBPRA0243 hypothetical protein MFNKMKISLSSCDITETIRNIALINEILLDLKLNDMVCLYLNNLDFLFKE VLNNTHHLTSPNGVFFIWIGDIPTSSLTYIDVWINSISNEKISLWYDSQF LLAGKLRKIIHSTYKLNNKDSKDVIQIQNYVFKEIKESMMNNNLSGDDAI IDFVYKLDKGICITLKEKYNAIKRRYKHIGSYIDLVDINYFIKDVFLSNF YYDCYIMEILLRYNLAAASDITRLSILYRYGGTYIDVDTLPSLEHVFKRT NETLGNNILNKNIIDVFKSQLYIEKIKNNNIVKVDLLKATKKLYPALREI NKYLPDLLIEDIEKLKVENLYEKHSIKKIDANLFSMSANKNSIGEFNNNI ISAHSNSKSIKIVLNEMKKRYNYISEHGFDLLNSSTASLGKNDYYNRLKN YRFDAIDNDDYVTLITSGPSLLLEVSIGLSYDILKMDYSTNQVSLSYALQ TPHLGIGYTDQTMYTSDHIKSSWMKNKELEDTMV >PBPRA0214 ALL3135, hypothetical protein MKIEYCRSKSLNFGDDLNLWLWPKLMGDIFDDEDDNVYFVGIGTILTKKR IEQQLKHAKKIIIFSSGAWGDSIPELDERCCVYGVRGPRTAKKLGLDDDL IVGDGAYLLREVELPAVAKKYEVGFIPHHRSEDYVDWQEICKAAHVKFIS AKQPVDTFLDELRSCNKIVTEAMHGAIVADAMRVPWVAAKFSPLFNEEKW YDFAESMKIELNIHSLPFYTQHKMRVGKLIENGIKIVLSGLLKNEKWQSL LFLNKNASEHELAILSDNVSFIAKNVEGILSLDEIVSTTSLKQLNVIKKI IDDNK >PBPRA0080 CBU1270, Transposase and inactivated derivatives [Azotobacter vinelandii] MNSLTIGLDTAKSVFHAVEKNSRGRVLSKAKLTRAKLFTYFANKPPCTVA LEACGASHYWCRVISAYGHKAVMIAPQYVASHRKGNKNDFNDANAIADVA QRDDIRTVPYKSIEQQDIQLLHRVRERLVRQRTALGNQTRGLLSEYGIVL RQGLAHLRKELPFILEESNNELTELACRQFFLLHEELLVLDEKVKQADNE IQRVALSHPISQRLMTMSGVGPIISTILLVALGKGEHFRNGRHFSAWCGL VPKQHSTGDKARLLGISKRGNTYIRTQLINGARSALRNASNKNDQVSRWA ASLAERIGFNKACVALANKMARFAWAMVHNGQNYQLKP >PBPRA0083 CBU1270, Transposase and inactivated derivatives [Azotobacter vinelandii] MNSLTIGLDTAKSVFHAVEKNSRGRVLSKAKLTRAKLFTYFANKPPCTVA LEACGASHYWCRVISAYGHKAVMIAPQYVASHRKGNKNDFNDGNAIADVA QRDDIRTVPYKSIEQQDIQLLHRVRERLVRQRTALGNQTRGLLSEYGIVL RQGVAHLRKELPFILEESNNELTELACRQFFLLHEELLVLDEKVKQADNE IQRVALSHPISQRLMTMSGVGPIISTILLVALGKGEHFRNGRHFSAWCGL VPKQHSTGDKARLLGISKRGNTYIRTQLINGARSALRNASNKNDQVSRWA ASLAERIGFNKACVALANKMARFAWAMVHNGQDYQLKP >PBPRA0202 CV3079, putative DNA repair protein RadC MSLKLLPEESRPREKLLTRGAKALSDAELLAIFLRTGIKGMNAVELATHL LAEFGSLRALFAADQTLFCLHKGLGPAKYAQLQAIIEMSQRHLEETLKEG DVLTSPQHTRHYLSQLLRDRQREVFYVLFLDNQHRVIAGEVLFEGTINSA AVYPREIVKRSLEFNAVALILAHNHPSGVAEPSQSDLRITRTISDALALV DIRVLDHFIVGDGEIVSFSEQGWL >PBPRA0283 DAM, putative DNA adenine methylase MKKHRAFLKWAGGKYSLVEEIQRHLPPARKLVEPFVGAGSVFLNTDFEQY LLADINPDLINLYNILKDDPEKYIEDVRKLFTPEFNQKEEYLKIREEFNK TQDPYVRSLYFLYMNRHGFNGLCRYNKKGGFNVPFGSYKKPYFPEKEMYF FAEKAKRATFVCEGYQQTFSRARKGCVVYCDPPYAPLSSTANFTSYTGNG FSLDDQADLADVAEKAATEREIPVLISNHDTKLTRRLYHGADLSVVKVRR TISRNGSGRNKVDELLALFKSQEKSPNC >PBPRA0009 PLU0002, Putative DNA polymerase III, beta chain MKFTVEREHLLKPLQQVSGALGGRPSLPILGNILLKVEEGYLSMTGTDLE VELIAKLALEADFEVGAVTVPSRKFLDICRGLPDGAKIAVTLEGDRILIR SGRSRYSLSTLPAADFPNIEDWQSDVEFTLPQGRMSQLIQSTQFSMAHQD VRYYLNGMLFETDGSHLRSVATDGHRMAVCAIDLAQELTTKQIIVPRKGV LELVRLLDNAEAMVDIQIGNSNIRATVNNFVFTSKLVDGRFPDYRRVMPQ SSNKFVEASCDELRKAFSRAAILSNEKFRGVRVNLSKGEMRITANNPEQE EAEEFLDVDYQGDDLEIGFNVSYVLDVLNTLKCDQVRLSLTDANASALVE DCANDEAMYVVMPIRL >PBPRA0011 PLU0004, Putative DNA gyrase, subunit B MSNNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDE ALAGHCEDIIITIHEDNSVSVSDDGRGIPTDIHEEEGVSAAEVIMTVLHA GGKFDDNSYKVSGGLHGVGVSVVNALSEKVELTIYRHGFIHHQIYRHGVP DKPLETIGETDKTGTLLRFWPSEGTFTNVVFHYEILAKRLRELSFLNSGV SIRLIDEREEGKQDHFMYEGGIRAFVAHLNRNKTPIHAKVFHFDFEREDG IVVEVAMQWNDGFQENIYCFTNNIPQRDGGSHLAGFRGALTRTLNTFMDK EGYSKKEKTSTCGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAV ESVMGEKLSEFLLENPSDAKIVCGKIIDASRAREAARKAREMTRRKGALD LAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKNQAILPLKGK ILNVEKARFDKMLSSQEVATLITAMGCGIGRDEYNPDKLRYHNIIIMTDA DVDGSHIRTLLLTFFYRQMPELIERGHIYIAQPPLYKVKKGKQEQYIKDD EDMDQYQVSLALDNASLFATEGAPAITGLALEELVKQYNAGMKLIERMSR RYPLLMLNEFAYQPRLSIEMLSDETAIEAWATQLVAALNEKQSGESQYRF AIQRDEEKNVFLPQVIVRTHGVEYDYTLSYDLLNSKEYSKLADLSEAFNG LIEDNAYVQRGERKQSISSFKEGLDWLIKESRRGVYLQRYKGLGEMNPEQ LWETTMDPESRRMLQVTINDAVAADELFTTLMGDQVEPRRNFIEENALKV ANLDV >PBPRA0257 PLU4759, putative primosomal protein N` MTPNIARVALPVPLDKTFDYLIKAGSFPVVGGRVKVPFGRQQLVGIVIEI TDKSDFPIAQLKPIYTVIDQAPLWTSPLFSLLSWASHYYQYPLGDTLANS MPGLLRKGRAASTGTLKYWAITEAGRDQPITALKRAPRQVQVLNILRNGN RRHEALLAEEVSSATLKTLVDKGWITELQEKPRLVDWHKHFAITEEKPRL NEEQALTIATINANPEFGCYLLEGVTGSGKTEVYLNALEPILAAGKQALI LVPEIGLTPQTINRFRRRFNVPLETVHSGLNDTERLSSWLAGRDNQAGII IGTRSALFTPFHNLGIIIVDEEHDASYKQQDSLRYHARDLAVMRANKENI PIVLGSATPALESLHNAKTGKYHHLHLTRRAGNAQSARHGVLDVKGLYLD AGLSAPLIAQMRKHLTAGNQVILFLNRRGFSPAMICHECGWLAECDRCDA YYTLHQQSGELRCHHCGTQRPIMHQCNSCGSTQLNAVGVGTEQLEQQLAI LFPEYKTVRIDRDSTRRKGSLEDYLEAIKNNEYQILIGTQMLAKGHHFPN VTLVSLIDVDSALFSNDFRASERLAQLFIQVAGRAGRASKPGEVLLQTHH PEHALLQALLHKGYDNFADNALIERKEALLPPYTHLALFRSEANNSDHVC QLLQQIRGIFESSPLFNQDIFIMGPNPAPLARRAGRYRWQLLLQAPDRKT LQRMLAIAKPAIQLLPLAKKVRWSIDVEPQDLT >PBPRA0104 RB787, hypothetical protein MTLFEQHQLPCILESRLSKRYQTLIMEHMTVNSSNAPGVKSLRHHTQSWA STQATWRFYHNEDVTFPMLSGPMLGLARSGVKESQSRYVLMAHDWCHINF AKHHSKLDKTKMSHALDVGYELQASLLVDANTGAPIAPAGLNLLTSNGIY QCRSQELQPKQSHLDSLFDSIHWQEQLDLDKPLVHVVDREADSAKDLRRL GSVHWLTRTKKGSTFRHEGQFKTAEIISRTISPDLKGVISLRGKEGYLFV GETTVELHRKSEKLASAAPTCRFVMSLVTDDEGKELARWYLLSNVLDVDA TEIATWYCHRWNIESWFKLLKSDGHQLEKWQQTTAESILKRLITASVATT LIFKLYSDSSDEANEFKGFLVKLSGRLTKRTKPVTQPSLLAGLWVFLQMC EVLDTYTMDEINAMRQIASSFFAQSV >PBPRA0245 RB787, hypothetical transposase MTVNSSNAPGVKSLRHHTQSWASTQATWRFYHNEDVTFPMLSGPMLGLAR SGVKESQSRYVLMAHDWCHINFAKHHSKLDKTKMSHALDVGYELQASLLV DANTGAPIAPAGLNLLTSNGIYQCRSQELQPKQSHLDSLFDSIHWQEQLD LDKPLVHVVDREADSAKDLRRLGSVHWLTRTKKGSTFRHEGQFKTAEIIS RTISPDLKGVISLRGKEGYLFVGETTVELHRKSEKLASAAPTCRFVMSLV TDDEGKELARWYLLSNVLDVDATEIATWYCHRWNIESWFKLLKSDGHQLE KWQQTTAESILKRLITASVATTLIFKLYSDSSDEANEFKGFLVKLSGRLT KRTKPVTQPSLLAGLWVFLQMCEVLDTYTMDEINAMRQIASSFFAQSV >PBPRA0091 S3908, putative ATP-dependent DNA helicase Rep MKLNSRQTEAVKYISGPCLVLAGAGSGKTRVITNKIAYLVQHCDYKARNI AALTFTNKAAREMKERVGKTLGKKEAKGLMVSTFHTLGLNIIRREYKALG LKANFSLFDDQDQMALLKELTEAELDGDKDLLKLLQSAISNWKNEMLSAA EAQAYAQSERDQLFAHCYELYQRQMKAYNALDFDDLILLPVLLLRDDQEM RQRWQNKIRYLLVDEYQDTNTSQYLFVKLLVGERSRFTVVGDDDQSVYSW RGAQPENLGLLQKDFPSLRVIKLEQNYRSTSRILRTANILIANNPHLFEK TLFSEIPDGEMLKVITAKNEDHEAEKVIGELIAHRFLNNTGYKDYSILYR GNHQSRLFEKSLMQNRIPYKISGGTSFFSRSEIKDIMAYLRLLTNLDDDN AFLRIVNTPRREIGPVTLEKLGTYANMRGKSLFASSFELGLEQHLAGRGL ENLQRFTRWIVEMSENIERGDSVAALRELVRDIHYEDWLYESSPSPKAAE MRMKNVSQLYSWVTADLEGDNYDNEVKTLKEIVQRLTLRDMMERGEDDDE ADQVQLMTLHASKGLEFPYVYLVGAEEGILPHQTSVDEGNVEEERRLAYV GITRAQKELTFTLCKERRQYGELIKPEPSRFLYELPQDDLQWEVEKRPVT QQERMQKGQSHIANLRAAMFKKN >PBPRA0010 S4007, Putative RecF MEAIHYLGHGRSFRSHLTSRVIRHEQQELFIHGRVLTNNQLELPLGINKK RDGTTEVKVSGESGQKLSQLAQVLPLQLITPEGFELLIGGPKYRRSFIDW GVFHIEPKFYNAWSRIKRLTKQRNALLKTARSYRELSYWDQELAVLAEEI SVWRDEYLIAVKQKAAEICQGFLPEYEIQLSYYRGWEKETPYAELLKRNF ERDCQLGYTVNGPHKADLRMKVSGTPVEDVLSRGQLKLMVCALRLAQGLH LTEATGKQCIYLIDDFASELDSHRRALLAQRLKETNAQVFISAISNEQIA DMHDENGKMFHVEHGKITAG >PBPRA0187 S4077, putative ATP-dependent DNA helicase RecG MSGQLLETIALTELSGVGAKMAEKLEKVGLTSVQDLLFHLPLRYEDRTRI WPIAQAMPGQHIAVQGEVLNSSITFGKRRMLTVRIADDSGSATLRFFNFN AAMQNSLAEGKQVKAFGEIKRGKFGLEIIHPDYSVFAESVSLTGEETLTP VYPTTEGLRQLTLRNLTDQALSLLDKAAVTELLPEGLYDRQMTMAQALHV MHRPTPDVSLDQLEAGKHPAQHRLILEELLAQNLSMLAVRSKSQQHSAWP LAACDNPADSLKEKLLASLPFSPTNAQQRVVADIEADLIKPLPMMRLVQG DVGSGKTLVAALAALQAIQHGFQVALMAPTELLAEQHAQNFAQWLNPMDI QVGWMAGKLKGKARETELARIENGEAKMVVGTHALFQNHVSFKNLALVII DEQHRFGVHQRLELREKGANEGHYPHQLIMTATPIPRTLAMTAYADLETS VIDELPPGRTPVQTVALPDSRRAAIVERIRTACLNEGRQAYWVCTLIDES EVLEAQAASDTANDLTAQLPELNVGLIHGRMKAAEKQEIMRRFKAGELQL LVATTVIEVGVDVPNASLMVIENPERLGLAQLHQLRGRVGRGKVASHCVL LYHAPLSKTAQKRLGVLRDSSDGFVIAQRDLEIRGPGELLGTKQTGIADF KIADLVRDQHLIPQVQKLARYIHEQHPNNAKAIVQRWLGQRENYSNA >PBPRA0081 SO2276, transposase and inactivated derivative [Vibrio vulnificus YJ016] MKTILKIPGHIGLESVDVWFQDEARFGQQNTTTRVWAKTGTRPRVIKQQQ FEYAYLFGSVCPSRGIGEAIVVPWSNKDAMKLHLQQVSSATEKGRHAVVI MDGAGWHTEDTAHSFHNISIIKLPPYSPELNSIEQVWSWMRQHHLANQAF KDYDEILDKVCSAWNSFLSDTKRVTRMCARSWISLTS >PBPRA0078 SO2276, transposase and inactivated derivative [Vibrio vulnificus YJ016] MKTILKIPGHIGLESVDVWFQDEARFGQQNTTTRVWAKTGTRPRVIKQQQ FEYAYLFGSVCPSRGIGEAIVVPWSNKDAMKLHLQQVSSATEKGRHAVVI MDGAGWHTEDTAHSFHNISIIKLPPYSPELNSIEQVWSWMRQHHLANQAF KDYDEILDKVCSAWNSFLSDTKRVTRMCARSWISLTS >PBPRA0082 SO2874, transposase and inactivated derivative [Vibrio vulnificus YJ016] MDSLNNIDFKSLASKQTSIQMKMRFLALAHFQDGHSRTQIAKYLKVSRTS VNKWIQVFLEEGLDGLKEKPRTGRPSFLSHQERQLLAKYIEENAAKPDGG RLTGHDIHNYITQTFGKAYHPDYIYILLKKMGFSWITSRSKHPKQCDKIQ DDFKKI >PBPRA0079 SO2874, transposase and inactivated derivative [Vibrio vulnificus YJ016] MDSLNNIDFKSLASKQTSIQMKMRFLALAHFQDGHSRTQIAKYLKVSRTS VNKWIQVFLEEGLDGLKEKPRTGRPSFLSHQERQLLAKYIEENAAKPDGG RLTGHDIHNYITQTFGKAYHPDYIYILLKKMGFSWITSRSKHPKQCDKIQ DDFKKI >PBPRA0122 STM3976, putative tatD gene product MTGLILTGTSIEESQQAQQMAQQWPQYCYSTAGVHPHDAKSVEDFTLPDI RALAATPEVVAIGECGLDFNRDFSPRPQQEAVFDAQLALAAELNLPVFMH CRDAHERFLDILRPWRTKLPAAVLHCFTGSEQELKECLELDLHIGITGWV CDERRGTELRDIVHLIPDNRLMIETDCPYLLPRDYRPKPKSSRNEPQYLP HIASVIAQCRQQEAAEVVCNSRATTQAFFVIGPPETL >PBPRA0152 T3950, conserved hypothetical protein MTRHKQQTGRNMPNNRRDGFVRIISGQWRGRKLPVHDVDGLRPTTDRVKE TVFNWLAQDIYQAKCLDLFTGSGGLSFEALSRGAESITMLELDKKAANQL QQNLTTVGATNANVLNTDSLKYLAQTGTPHDLVFIDPPFRKDLIQNIIVL LEANNWLTPHAMIYIEAEKELGEIVTPSHWRLHREKIAGQVCYRLFEREK V >PBPRA0008 VV0011, Putative DnaA chromosomal replication initiator protein MSSSLWLQCLQRLQEELPATEFSMWVRPLQAELKDNTLTLFAPNRFVLDW VRDKYLNNINRLLNEFCGTDIPILRFEVGSRQVVVPSSQIIAPAAPAVTL APRPLPATRILQDDAPSRSWEPAPSPVQPESKSGYRSNVNPKHNFNNFVE GKSNQLGLAACRQVSDNPGAAYNPLFLYGGTGLGKTHLLHAVGNAIADRK PNARVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANK ERSQEEFFHTFNALLEGNQQIILTSDRYPREINGVEDRLKSRFGWGLTVA IEPPELETRVAILMKKAENHNIRLPDEVAFFIAKRLRSNVRELEGALNRV IANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKMSD MLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRK IVQLREESHDIKEDYSNLIRTLST >PBPRA0210 WAVC, conserved hypothetical protein MEELCFDNQRIWFDPNLLQEDPKACFDASFWQQQGKVIGSAQGRGTTWFV QGETLPMALRHYRRGGLFGKLIEDAYVFTGWEKTRCAEEVALLSTLAVGG VNVPRPVAARATRHGLVYRADLLVEKIDSAKDLVDLLQQAMLPDHVWYAI GRTVRKMHDLQVCHTDLNAHNILVDSRELVWLIDFDKCYTQEGEAWKAKN LSRLHRSFVKEQGKRNIHFSATSWQVLCQGYELPDN