Gene list
Applied filters:
COG category: Replication, recombination and repair
Gene type: CDS
Gene type: CDS
Gene type: CDS
Genomic element: chromosome
Number of genes found: 62
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View as list | ||||
# Anaplasma phagocytophilum HZ, HZ >APH_1361 major surface protein 2 MIRPLGMGIVVIFVLLGTAVTSAHADNDKSGFFVGLGYGLSVSQVHNFKI DDGGETRWLFPFHERVHREELHSANFYWGPEVASEIRFQRGNTTFGGSAG YLFSAVRLEIDLTHERSEILKSGLHKGRKGGGMPFVLGKHKAMVSLQRGY DRIDLIGSLSRENVIAIEKYMVAELGYDQLRRLSVMQEEELKRVNKTKKV VGAFPRNRSDNFFNLLDLMIVQSVLFTKALALTVEGAEVIEIMAIRNTTA TLNLCYDFPSMELVKLNISPYTCAGIGGSVIGITKGHANLQLSYKLKLGL NYRFLSNAVAYIGTSYQKVLGSEYYNVPLKRLVDDISPTNSVREKTSVGF GLQYVGLELGARVSF >APH_1371 uracil-DNA glycosylase, family 4 MTDEHNKPNVEDIKMFAEVLRFYHDSGVTHTLNDDLHPDDTLSPANFEKS PVVPDRAKTRESQEIVLNKTSNKKSSSNANMLQWVEEARKAAANCVDLAE LRAAVCAFEGCEIKKAAVNTVFSDGNPKSKIMLIGEAPGSTEDREGIPFC GASGQLLDKMFAAINLNRSSNIYISNTVFWRPPGNRKPTDFELEVCRPFV EKHISLVDPDVVVMVGSTACYSLLQTPDNISRLRGKFYEYTNSFLSRSIT AMVIFHPAYLLRQPQQKRLAWEDLKMLRAYIETHKIQVNT >APH_0332 conserved hypothetical protein TIGR00250 MLCESIRELFSALEPGRRILGIDFGERKIGLALSDPTYLIAIPHSVYHRR NMRQDLGELSAVLRSEDAAVVVMGNPLQSDGLEGEMCQIVRAFAQKLIKK SGVSIYLHDERYTTAMASRATREAGLRRKESQKIDDKISAALVLQQVLDI ARAEGIQATGGNNSCL >APH_0783 conserved domain protein MDTVVGHSAQKETLWQNREVNTWLLCGKRGIGKATLSHAYARFLTRSDSL DSHPDVAIIDDETSPIGIDKIRKIKHFLHMSPISAERKIVILDSIDGLNS NTINSMLKILEEPPQHSLILIISHNLYSVPIVIRSRCMILSFSQLSLEET RQVIGLKFPDMNLEDKAVALYPGIPGMVSEDIDKEITLYENIIDLIQKKN VSDTIGNVLETELPMHKIEYLSLKAIYDTILSTLRLHESNTNYVTEANIL AMLDKYSKAQEIFATARKLHIHREATLFRIAEIISNLLKSKK >APH_0849 conserved hypothetical protein MDCRKIDTVVVPNRSDAECLQFYFSKQCGIEDNIEVLAFSEIVKSAYEDD IEARAGALLLCMQFIEEWNALRHTDYPASLAKELLLMLDEIYLNCTDLDR LSTSLEEEDLFGYRCLTSEFLIDFARWWKSTGHSNASAIAQVERFFSELC LSGKKVAVAGIASNRAFSELLRSIFESISESFIILPDLDLEMPENKWKTL EMGHYQYRFMKLLDELGIGREEVSILDQRDKNHLVDLAFNFEIPSLSDER YCHIKEQQNIELVICGSENEEARKVIEIAQRYCCASGNDRDVFCGTEKNA NNAVSTNNTASSSALNNNIALSQYASEIAGYTRSIQGACTVFLGSDSLSS RIYSTLSLRDTEEVRCDDEHVISTLMLCVIEVVVSEGDAAHLLSMIKHGM VTIGYEDKEAYGAAVCQFETEIIRKHAVSGFEAITHAVYEVGSAESREYW RRVVEAIGPFMELDGKHSLGEIIQAHLKSIRNLVGGNSAYVKRDNCDGIF ENIEAFFRNLTAYCKGKKIFTVRNYKHICKDLLECYFKDARNDIFSVGSV RSEVVIISGFNEGGFAPVRRSSLLNNTIRKKLKIPTDEGYKGIFLSILYN LFHAKRLYITRSVESCGKVTEAPLLIRYLDFLLSSFSNASKSSSDSTVSS VDLNIDKSAYLSKFLCEPNPKLEVRSQVFSVLTAEALGMLISNPYAFYSR YVLGIYPVKSVNTGNMAKNFAVTVRSIFLQYLKNMGLGSDYSALIDIAKR EFATVCKSYPYIEKLWWPRFEAMAENFFQADRERKCNVSAIEVESDFTWD VSEGIKVISKCDSVSYLRDGSPLVVCYKIGMVPSQVDIQCGFASRGIIDS ICVSESNEKKDASFAYWRITPESVEITEIKDLPDVIKAAKEGLQNFLVKF QEEMIPFYPREDFSKFVEYELFSRIREKIPQYGRPY >APH_0337 primosomal protein N truncation MIYNARDMAIVLGKHVDIPVVLCTATPSLETMNNIQQKKYNHVVLKRRFG EAVMPDIIVADMRKDELKKAWMSTCLYEKICETLAKQQQVMLFLNRRGYA RLVLCKQCGHKVNCPNCCTWLTEHRVLGAMLCHYCAYSCEIPRECPSCQE YNTMSPYGVGMERILEGIQELIDAEHFTILSSDIGIPANSQ >APH_0351 conserved hypothetical protein MLDSLLVFDIETIPDTDSCNNLIGETVGEDDDILAKREAMANYHLDITNG QNSFLRQPFHKIVAISFLRADIKRGGGYESFTLQEIRSGGTALSSEQELV KGFLSYVSAIKPRFVTFNGRTFDFPVLKYRAMLHGVQAGYLYKAGDKWNN YFQRYSVDWHCDLLDYLSEYGASAKVKMHEVCAVMGFPGKFGTDGSAVAE LYDNGKLSMIRDYCETDVINTYLVYLRLMQHQEKIKTDCYNSCIVSLLEY LSKSEKEHLLAFKAAWEKVSQGKFLLTP >APH_0819 hypothetical protein MHASSRLNSLVLVSIKSLLNTDAAIDSTEFCDVMLNKIQNNTPYPEFYSI LVFMIQYLHGMLNKYPQMPNYAIEDYSVYMLHLTDVLESITQISCLITQQ ALLEESQPMGASWEKFDEAYSELFNALWHTVTIYRGENRTIIERNLELSK VPSIIITMIITMQHYRARSMPVSMALNSSALIRENETIERCAAAMRIFHD AVNLIPEYTVDAEDSPPRTLMYRDLLSKTEQTSRMVSLVNRHTPLRKRSC VKNCLKEQFSLLMITIELLAKNVDAVYTYCYIPISKAKDIILSEAEAFAS NACIDNRNSDAEHRVILTRFSAAFIPLYKSHIWSRLNNVNCSKRHHKVAN SVSDCLRVLLKALELHNVSKEKDRLRAMAKTSEYSRIVEDFRKYLDELPE LILEQKKYNGPEPKCTQVLSDAYISMLWIPEYIEQLLNAQLPLERKGTPR NLMHAPSVKPGNTSKTKGAH >APH_0528 hydrolase, TatD family MIVDSHCHLNYFDSASLRDIIDHACAVGVSLMQTVCTTIEEFPVLLEIAN GYAQVYASVGVHPCNSAKGEFSSVDDLVAFAQNNKVIGLGETGLDFYRSE EGIDKQEKSFLAHIDAARVTQLPVIIHSRNADTRMAEICASEMKNGAFKG VMHCFASSMELARHSLDAGLYISFSGILTFKNAGFLRDIAKFVPRDRVVV ETDSPYLCPEPHRGKQNSPEMTRFVVESLAQIWEESVDVVSEVTTKNFFT LFDKCARLYYASEESNNLRS >APH_0075 putative methyltransferase MIRITSGKYRGRRIFTGNSLDARPAMSIIREAIFNILRAYISIEDAQVCD IFCGSGSLSFEALSRGAKHACLVDINAANLKLVRRTATSLGVEKLLSILC CDVQYLSYAERQYNLAFVDPPYCRPELVEVTLKALSEKMWCVDGSIVVLR IRKGEKQFAIPQEYTLMQTRVYGCSELMFLQV >APH_0994 conserved hypothetical protein MYTQLKLFDVKEMHSYQCSDYVVLDSNRHTYNLLMNSDLWSSFVLYGVKG SGKTHLAHLWGKLKQASFLTYGKISDAIQVIKESNAVIAEDIDSIPDEEW LLHCYNYSKENRKPFLMTASVPPNLLNHSLKDLRSRIISTMSAKLVEPNE ELLRIMLVKLFTERQLHIDIKTINYILNNVERSFKKLSDIVRLIDIELTS SAGGVTVPFVRSIIRRVELV >APH_0903 helicase, UvrD/Rep family MEYRDFPQANCTSQQVEEHYPEDFMLNLNAEQKEAVLQVAGPVLILAGAG TGKTRTITARMGHIIKEGYAQPHEILAVTFTNKAAKEMLSRVNNIVTASG IWLGTFHAIAARILRSHAELVGLSSNFTIISPDDQLQITKTIAADMQQGY PATECKGILHTIQRWKEKGLLPHDITETELQRSSNSFALRVYEEYQERLK ALNCADFGDLLLHNVTILSANPDVLAHYQEHLRYVMVDEYQDINTIQYLW LRLLVRRHKNLCCVGDDDQSIYNWRGAEVGNILRFSDDFPDAKVIRLECN YRSTSNILASASAIIDNNKSRLKKTLWTHNQAGQKVGLMKFFDGRLEAQY ISEHIKSSYDYKFSETAVLVRASFQTRVFEEFFVRYGIPYKIIGGTKFYD RVEIRDLVAYLKVVVNPNNDIAFEKIINKPKRKLGTSTVNKLRAYGRKHS ISLTEAGHSMIKDGLLSDNTSNILQDLLKQFDDWREMLSRDSSVNVLKAI AHDSGYIESLKKDGESGLSRIENIKELFSAVSGFDDVSKFLEHISLVAEN DSLEEDNNYVHVMTLHAAKGLEFPLVFLPGWEEGVFPHEKSMNDITGNAL EEERRLAYVGITRAREQLYISCAAMREINNWSQSMKMSRFIKELPREHVQ VLHNMTGYA >APH_0471 exodeoxyribonuclease III, N-terminal truncation MESAGSYSSEESRYIECTLECTGNKKIRVVSVYVPNGQEVESETFFYKLK FLEHLKDRLLNIMKTEDFLIAGGDFNVAPEEIDVHDPKALDGRLCFHILE RAKFREILNNGIVDIFRTFVGIDRKEFSWWNYREGGWQNNRGLRIDALLS SPQIADKVLDCSILSKVRGWDTPSDHAPVMGDIDV >APH_1409 putative DNA replication and repair protein RecF MSCKFQSYVQVVKLVNFRNYSKVELESNGKSVVLLGENGVGKTNILEAVS LLSKGPGLRNVSADCMQNSGTTIPWLVHYNIVGNGEFFSVDITKKNNKRS VTIDEKASLYSTLHKILCILWLVPQLDHILLKAPTERLRFFDRMVHIFDK DYSLHMVKYEKAKRDRKKILQESPHNHHWLSSLEEIMSASGVHIAKIRQH VLETLHATLAEHSSRSTFFKFIIRLESKVFELLDNPDKAVDAYAERLRSN RNIDAARQCTTFGVHNDNFQVFNEKKDLVASSCSTGEQKILLLSLLLTAA TAKHKIDGQAPIMLLDDIMSHLDPQHRKELMSIIEHLGCQVWITDVDEKN FEGFRENFQYFHVANNNVCKM >APH_1223 recA protein, truncation MKDSPSDKQRAVDAAIGQIERAFGRGSIMRLQNSPVEAVECVSTGSIALD AALGVGGLPRGRIIEIFGPESSGKTTLALHVIAE >APH_0933 putative DNA processing protein DprA MFRKLLELYKSPRKALEALHEGACRDIATVCSVYDAEKEIEFCRRIGARI IDIFDKQYPKMLSNIFDPPPVITVLGNEDLLQSPRTVAIVGSRDASANSI RLAYELSLELSQMNFVTVSGLARGVDSAVHSVAYHGKPTIAVIANGINVI YPRENAKLYKSIVREGGLLISELPFSAIPKASLFPQRNRIISGLSLCVVV VEASKKSGSLITANFALSQGREVFAVPGSPLDSRCAGSNDLIKQGAYLIE SATDIISVLGFSGMTGMEHALRDTQKRTSKNTTTTPVQDLILKNLSISPT NIDDLVICCNLDVSVLLAALLELELAGRVERLPGNRFALIATFS >APH_0736 DNA repair protein RecO MQWQDHGMIVSMTPYGDTRSILSVFTRNHGICNAMIRLNKKKQSLQIGDR VCVTWRARLANNLGYFNSCEIISSAFYAYFQDHSKLLCLSSVTSTIYKSV PTNDAHPILYDYLIEFAEAAECGGHWYNEYLKLELEILSQLGFALDLSRC AVYHCEDNLLYISPKTGRAISERAGVSYRHLLFPLPQILRDLHNGTHTEQ CSRKEFLLCLQILGYFLHRHLLSDDSKFLEQRKEMTALIYEEEAF >APH_0530 hydrolase, TatD family, truncation MPIKKIDGVETDSPYLCPEPHREKQNSPEMTRFVVESLAQIWEESVDVVS EITTKNFFTLFDKCARLYYASEESNNLRS >APH_0258 ATP-dependent DNA helicase, UvrD/Rep family MLLPENELIDVLRETCYQNADDILINRARNLFFRIPNILKVQTVHGFCKS LISSFPSEAGISANFEVRELSESYPKIFYKLLHESDYIAEHLKEVACELK ESTLFDLLYKIMKKPHIDLEVPQPTDLHVKPDHLLCPEEIIDALNCGGLR DKKISTKLRSWNNLVHKTHKKIEEYLKTFICIASLEKKDISSIASKQVLQ QCPTVGGAIVNEQEKLLEFAEQYYSARISKRTFHIMQLVRHGIRIYEYDK KNAKYLNYDDIINLSLKLISDPTHKDFVLFSLDSQINHILVDESQDNSLE QWHIVAELCNEFFTGLSSNTNQRTLFVVGDVKQSIYGFQNARPDYFHFMH KYFAQKSTNPVTIQLSDSFRSTPPILALVDKVFNTLREQVSFQSQEIVHN TYRANEYGYVEIWPLLRSTRRKKPYAWDLESIKECGENADHSLLLAQTIS QTISSWIKEERKLQAKNRPVEASDILILVRHRSVFVDQMIASLKQENIPV TGRDRCNIMDYVVIQDLVNLGEFLLLPENDISLATLLKSPIFRYTDSMLF EIVSSSSEKCSLWNKLQKFTTMQETVKYLKLLISISQNRSPLDLYFFILS QHKEQFIKCLGQTSVEIIEEFINLLIAFQSNNLNLLEYFIQWIKSTNPVT KSDMSIAKNLVRIMTVHSAKGMQAPIVFLPDTTSVPKCDLQVVFDDKNTP LWCASDTNSYCKNLKLRKSQEEYNEYLRLLYVAMTRAEDELYIAGIGTAN SRSWYDIITNSSAEILHKKNTCLSPMFPEPIDVLYLEH >APH_0708 hypothetical protein MNYRASIIVSMLAVLILIAAMIAILLFRSYMDPAKFWWSFAIILSCFVLS SIICVASFIKYASNYLQDKKTAFVIEVGNSDILNELKNALTYSSHLNNFL ISIGGEERSYTFRKSKSGWFFSKNWKKEEEKNDYSANRVYLNLCTTLITH CFGNVSKFAEAVSNIIEVSLVFSGEGKEAPTLRLCFQEALKRNSFFSYVY ESCRTQIEDSTFFRNYIELLKILFKSDIDKDATIAKKNSDSYKVLRKKAI QRMLSDMAQNKKVFHAVGDSKTVLWEEHHRKEYLQDLDVIHRQASSLQSY EIDSYNSDYSNGVLNFLNAVTPNNGTLLRGHSSQILLHLLSNNRAKYAFA SMNETFGSTISDKLEEIGCKSGKCLRIMRLLMSNNVTLEQLIELFGSKEG YCISYYIFNRFKNSKWRGSDWIGYINQKARDLFPKFRLRNDPYNDNYDLL SRDTTKEGNRVESYANDSIGSEYCDTLDYQIFDLLERKCLSLSKREMSLS AAIDFIAEESLSDLCCEPIWNTYSVEKRLHVDIPVARHEEAILFSLGDEA AINNVKSLPIEGITSDVSAYIGDDISIERYPYRNSSFLC >APH_0572 DNA mismatch repair protein MutS, truncation MSLITGPNMAGKSTFLRQNALIAVLAHIGSFVPAEHAHIGVIDKIFSRVG ASDNIALGHSTFMVEMVETAAILNQATSKSLVILDEIGRGTAINDGLSIA LAAIEHIHDVTKSRAICATHYHELPKLSSHFVYM >APH_0474 dnaA, chromosomal replication initiator protein DnaA MDRDSTYDGHLSWQSVQKKLRDFYGSAAYDSWLSALVYSGYENGRVILLV PTRFIKEWILVHYLEKILEYWRGENSAVYCIDICVADGAESSVLQGNRGV SVRSTEAQEVSSVSTYEHLSSPLDPRFTFDNFVVGKPNELAFAAARRVAE SSEPIPGSNPLFLYGGVGLGKTHLMHAIAWYALGSPRKRKIAYLSAEKFM YQYVTALRSKDIMLFKEQFRSVDVLMVDDVQFISGKDSTQEEFFHTFNAL IDQSKQLVISADRSPSDLDGVEDRIKSRLGWGLVADINETTFELRLGILQ LKVEKMGIHVPDEVLEFLAKNIKSNIRELEGALNKVVAHSSLVGSSVTVE LASDILSDLLRANHRLVTIDAIQKKVAEFFGIRLEDMYSARRLRALARPR QVAMYLSKRLTQKSLPDIGKSFGGRDHATVIHAVKQVEKFIDTDSKLAGD ISLLIRMLR >APH_0323 dnaB, replicative DNA helicase MGDLVHSSEEKGLMKSIAHLPNNVEAEQMLIGAMLRDNRICDALEDMISS EVFYDPLHGRIFDQVVKINKRGLSANEISLKMFFDNDEALLECGGGEYLA KIAAKASVVFDIRSVARVVFDAHLRRCLISLGSDIVGKAYDYDSDNPAEQ QIENAAQKLFLLGNKGKADRNYHTFATLIGDVRKKIESARHNKDALQGIT VGLKDLDLLLNGLQNSDLIILAARPSMGKTALALNMALSACKSLKEKGQS VGFFSLEMSAEHIASRLISIESEISSYKALSGKISSGDLQQVLRASENIC DLPLVIDDSSALSISGLRTRIRRMHQLHNVGVIFIDYLQLIKGTTKRSGD NRVQEVSEVTQGLKAIAKELNVPLVALSQLSRLVEQRDDKKPQLSDLRDS GSIEQDADVVMFLYREEYYELRKQPTEGTPKHAEWQMKMDSISNLADVFV SKQRNGPIGNVRLFFEPEKGKFRDYTARYGMYDQS >APH_1003 dnaE, DNA polymerase III, alpha subunit MDGIFVHLRTHSDYSLLEGMIKVESLVAMCVEQKMPAVALTDSGNLFGSL EFSDCAARAGLQPIIGCNIMVEESGNNLGNILLLAKSAEGFANLTNLISN GFNNSQLEKINRVNIDDLLKLNGGLIALTGGHDDILARALLNNGDDLRAL DSILQVFKDNVYVELQRHGLNGQREVEELLIRFAYERNIPLVATNDVFFA CRGDFQAHDILSCISTGAYVVQEDRHRLTPEHYFKTASEMYELFSDVPEA VLNTSLIAQRCSFIQEVRKPQLPHFPCFEGRTEAEELTECALAGLEIRLK SKGIGDDEEQRDLYLKRLKYELGVVISMEYSGYFLIVADFIRWSKQNDIM VGPGRGSGAGSLIAWSLGITDLDPIEFGLIFERFLNPDRVSMPDFDIDFC QEKRDKVIEYVKEKYGYVAHIITFGKLQARAVLRDVGRVMQIPYAQIDRI CKMIPHDPISPVTLLEAIEMDQNLKAEQENDETVAKLIEISLKLEGLYRH ASVHAAGIVICDQPLENFVPLYYDKSSSLPITQYNMKYVEKAGLVKFDFL GLRTLTMIDQICSLIRARGEEIELSKIPLNDKKTYEMLSAGDSIGVFQLE SAGMREAISKLRPDSIQDIIALISLYRPGPMNNIAIYISRKHGLEEPDYI HPMLECVLKETFGVIIYQEQVMEIARILAGYSLGEADLLRRAMGKKIKEE MDRQRQDFVDGAVSNGIEESKASYIFDLVAKFAGYGFNKSHAAAYALISF QTAYLRANYTKEFFTASMNLDIDDKDKLGLLCQQAKMCGIDVMPPDINLS SAEFTVSGNSIRYGLGALKNVGQLTAHEILPVEGGRYSDIWDFAGNVRIR SPLKRTLESLIKSGSLDGIHPNRRQLFASLGIILNIIENKKVSMDAHQFS LFSEKEEGQLEEVDDWTEDEKIEHEFATIGFYLRYHPLSKYEQVLGKFGV RFVSSTQEEKESGVTKRAGVVSSVKMRSANKERFAIVRVSDPHGVNDVAF YNSKTIEENRDLFNSGVPVMIDMDYNASKGRLVGRNICNFHESISLMMRR VRSIAIHTGQNTLIAHMLQEVLKRDAMGAEVYIELLSKGHLVLIKLPGAF LVTPEILAQIFNISWVDDITINHRGYL >APH_0571 dnaG, DNA primase MQNNNSITDNITLLRSKIRLIDVVAGKIKLTKRSGNNYVGLCPFHSEKTP SFNINSENELFYCFGCGATGDVIQFVSDTEGLDFKQAMQYLSERYHVELL DDKRPDSSHSALYDVMEKAAVFLSQQLSVSKAALSYLKDRGISDSTINRF RLGYVTSTGIKAHLLSLGISMEKMSETGLLTKSVQDCLYNRIIFPICNPM GKVIALGGRSITPGHTPKYLNSAENALFKKRECMYGLHLAMGQAKKLGKI IVVEGYMDVLMLSQLGIHNVVGLLGTSMTEFHLKNIWSVVPEIIVWLDGD FAGLKASVKIAQLAVSIMKSGSSIRFISIAEGKDPYDICREQSIDFVKDL IERAKLLSEFIWEYELSSSGIGDKVVPEQCMMLEGKIKEYTSRIQDPNVA KHYRNFFYQQMKALQGYKKWNANSYAGTAVSRANKVKSCDRLQDVSMKVC MEENYQLRVMYTIIECPKLLDDPAIFEQFASIDFSSVDRRVLQQHIVDIK STCDNVFLKQDLVEKLRPRGQNLEAILQYIIRSMANVGCAFIVPGLSDES IEKLAKQEWEKLMLSRQLNEIHEQIVKLRLEGKNDVALNLSEYAREIDDK LRSLWKC >APH_1097 dnaN, DNA polymerase III, beta subunit MSGEISRGLDFSISREDLLQALNYVSSVIERRNSIAVLSCVRIEAKGSVI EFTSTDLDISIEACVQANVATGGVAVASAQLLYDIVRKLSGEADVRFKLN DGKLLVACGNARFYLHVISPEKFPDIEGSSLDCGFDIPATSLAELLNKTK FSMSVEESRYNLRGVYFHVDDEMLCCVATDGHRLSLAKISKPEGLHSGIA VIIPRKTVNEVLKIIGHGGGDAAQMVSVGISNRKICFRYKGYFMVSKVLD GTFPDYAAIIPTECGNSVSIDASVLQSAVDRVSVVVFDKVKAIKLSFTEG KLVLSSASSDQGDASEELSVDYEGDEVVIGLNARYLMEVLGSIKGVCEIV FSDGSAAVLVKDGEYGMHIVMPMRI >APH_0730 dnaQ, DNA polymerase III, epsilon subunit MKVREIVLDTETTGLDADGGDRIIEIGCVELVDYVMTGRVFHKYIDPERD ISVAATRVHGITRESLIGMPKFAEVADELLDFLQDSALVIHNARFDMRFL EVEIERLSNKRAITNTIVDTLEMARKKFPGMPASLDALCKRFNISTQERK FHGALKDATLLARVYVELLEALQRRLVFSQEGDDSKQVSVIHDKAKRVVY PARTFTLSSEEKRLHRQTVSKMKNPIWLMCFDEKEFFCNENINS >APH_1348 dnaX, DNA polymerase III, subunits gamma and tau MNLALKYRPSNFDDLVGQDVLVRILRNSFSVGNLNTPLLMVGASGVGKTT CARIVSLCLNCENGPTSSPCGTCATCTSIKNSHNPDVVEMDAASNTSVDD IRVILESSNYLPVSSRFKVYIIDEVHMLSTSAFNALLKTLESPAQHAKFI MATTEVRKVPVTVASRCLRLDLGKLPIKQLYDHLVKISAKENIAHDESSL MLIAENSSGSVRNSLFLLEQALIYSNNKISLQEVRELLGCVDKKILEGIV RDIISSDVKSAIDGFRELCNASTPVIIFEGMQKVVYGLCMYSIDKDFHHG LGEELFTAEKSGSTPFLSRLWQLVLHGIQEIKSSESPEQAGEMLIVRLCY LSDLPSPQKIASSISSKYGDMPPSGGQGRSESLNAGSMSARSRPCFMGAA SSPTNAVGGISVLGDKKNNDVNDRGKVYNPDDDEAVVDVVKNFDGASVVS FKSFDV >APH_0899 gyrA, DNA gyrase, A subunit MSDGVLPVSIEKELEDSYLSYAMSVIVSRAIPDVRDGLKPVHRRILYSMY KSGYDHDKPYKKAARVVGDVMGRYHPHADTAIYDALVRMAQDFSLLVPLI DSQGNFGSVDGDPPASMRYTEARLAQAAHFLLNDIDEDTVDFRPNYDENE QEPVVLPAEFPNVLVNGAGGVAVGMSTNIPSHNLGEIIDASVMYIDNPEV TLEELMTVIPGPDFPTGGVIMGDAGIKSAFATGRGTIIIQGKTHIEELPS GRQAIIIDEIPYQTNKAKLVERIHELVKEKKIEGVSDLRDESNKSGIRVA IELKKQINSQVVLNQLLGLTPLRTSFSINTLVLDNSRPRVMSLIEIIETF VAFRKEVLVRRTRYRLKKVRERAHLFIGMYIAVLNIDEIVAIIRASKDAA EAAAALRERTWSPSEEVRGMIELVSDSTGVIEGGRYRLTAPQIKAILEMR LQRLTGLEKGKLEVELQSMVALITEYTKILSTDSLLMCMVREGLLDVKRR VATPRRTTIEESKGDIDAESLIPREEMVVTVTMNGFVKRVKLSNYRAQKR GGKGRVAQGIKEEDVTTKLFVVDTHTSVLFFSNVGKVYKLKVYKLPLGEP ASRGRSLVNIFPLAEGETITSVMPLPDVGVDGGVESMDVVFATSSGNIRR NALADFQYVPSNGKIAMVLTPGDQLISANVCVSTDHVLLSSRMGKSIRFS VGNVRQFKGRMSDGVRAIKLAEGDQVISMSVLHGSEASSEVREAYLKIPV DSRIKAAESDGESIGKRVSGMLEGLQLSEETFVDMVKKEQFILTVTENGF GKRTSAYEYRTTARGGVGVLNILTTARNGKVVASFSVAHTDQVMLITDKG KLIRISVSDIRIIGRSTQGVTLFKTEKGEKVVSVALVIDSGDNCDDDEGI GGEVSA >APH_0716 gyrB, DNA gyrase, B subunit MSSYNASSITVLRGLDAVKKRPGMYIGDTDDGSGLHHMAYEVIDNAIDEA LAGFCNKIDIVIAADGSISVTDNGRGIPIDIHEEEGISAAEVIMTQLHAG GKFDHNSYKVSGGLHGVGVSVVNALSSWLELVIYKEGREYFMRFEEGKAV APLKMVGECGNKKGTCVRFMPSSDVFSFTDFSYSTLENRIRELSFLNSNV SISLKDLRESPVLESNFGNVSDAATKGVSLFVEYLDRNKTPVTPVITLSG IMSGYEISVEVSMCWNDSYYENMLCFTNNIRQREGGTHLAGFRSALTRCV NNYATNEGYLKKAKVSIIGEDVREGLTCVLSIKMPDPRFSSQTKDKLVSS EARLVVESIMFEKLSSIFETNPKLAMSVVERVIRSAKGREAARKAREVIK SRGTLDFTSIPGKLADCQEKSPELSELFIVEGNSAGGSAKQGRDRRCQAV LSLRGKILNVERVGLDRTLSSSEITSLIMAIGSNIGIGSFDISKVRYHKI IIMTDADVDGSHIRTLLLTFFFRYMRELIDAGYLYIAQPPLYKLTKHKKD TYIKNDEALSDYIVGNATKNLVLSGAGECSGDELKAVLRKCVRIANITKT YSRIVPQEVLEALIVRYKRHGMGSSSEIMAYMNSMFPEYEWNVEVLEDGR LQILKLSQGMVDRYYLDADFMNTRDVQTILSVLDGIENVFTEDTVLTAKD CTIRVHSPCVLASSVVEFGRKDMALQRFKGLGEMNADQLWDTTLNPQTRT LLKVKIADAEAADAIFSVLMGDFVEPRRDFINNNALKVQNIDS >APH_1252 holA, DNA polymerase III, delta subunit MKVTASKLKDFFSNPGAYGSVLLYGNDYSRISHYSQKIINLLTCKEEFSV LRTEFSHASKEPEQLFVDLSTVPMFHQKSLVILTDAKDSLSPDLRTAVDN LNPCHCYVIVQAKELSSTSSLRTYYNNHVMYAAIACYKEDNINNIVAEFL AENQVTYNTETFALLCNLLQTSNACIQPELEKLLLYLGTKRNLSIEDLQE SFAADFDPALDDICVAIADGNLKSFNRAADALLQNKIAAVLIIRSSIKYF MTLEYLLRKVRSGCDINTAVKSVQPPIFFRLVAQLKKHVSTVPYQMVQLI LRRLHEAEVQCKLSDSSQESMFRYLMYSLILSIQQIRR >APH_0784 hup, DNA-binding protein HU MSKEIIVRALMSGLGFTKKDSSSAYDVVMSAIKTALETNHSIRLHNVGTL HVIQCAEKKYHNPKTGHLETLPPKRRVRFRSSRKLLDTVNV >APH_1281 ihfA, integration host factor, alpha subunit MVCCAWYSMVQTLTKARIASMINREIGLSREDSLAIVGEILDEMSSSLVR CGSLKISSFGIFKVIRKKERVGRNPKTLEKFVVEEHNTVTFCPSVTVKRF INGDET >APH_0271 ihfB, integration host factor, beta subunit MLRSDLIRRIARKNPTLGESVVSQILNVFFQSILQHMHDDSRVELRGFGS FASRSYVLKSANVALGKVQYKRMYFRPSEKLIKAVNQPAHPKSGSHS >APH_0138 ligA, DNA ligase, NAD-dependent MSDNDSRRRLADLNAQLKLHDVLYHEHDAPEISDAQYDALVQEKRELLEK FPELSAYNDYEGVIGALTVDARLPKIAHREPMLSLENSFTIQDVEKFISR VKRSLNMDPEVSITIACEPKIDGLSFAALYEKGSLIRVATRGNGHLGEDI TNTAKVIRKLPHKIANAPEVLEVRGEIYMHHSDFEKLKDVCNFANPRNAA AGSIRQLNPKIAEERNLRYVAYCIVNSALASQEAILKQLAEWGFCTHTEV LFADNMDDALSFHTRMYNTRSTLGYDIDGIVYKVNDTHLQKLLGSTSKYP RWATAHKFPSTEAITKLRDISVQVGRTGVITPIAELEPINIGGTLVSRAS LHNLNEIARKDIRIGDSVIVKRAGEVIPQVVGVDHTARCNSAVPEEYVFP SHCPSCGSTLSRAPGEVAMRCTAELSCQAQVLERVKHFVSRDGLNIVGLG EKQIEFFCNASYISNVADIFSLREKISHMNLSAEHGWGEKSIALLINAIN ASTTVKLSNFIFALGIRFIGKGAAKLIAEHYRSYSAWVRAMTSLANGEDP DNIHGIGLKSIESLRAFFSSEDNLRVLQTLEEKLNILNEIANTETASPIS GKTIVFTGVLEDMSRNEAAKYAETLGAKVGNTVTTKTDILVAGSNSGSKL DTARKLGIQVMNESEWKDLLKTVSNSE >APH_0107 mfd, transcription-repair coupling factor MDMGSSEIVTGIAPELEDALITEICRNNPKKSFVCVLQDDKPLELLVKTL KFFDSTHNILLFPAWDTCTYKHTSPSSYVMTHRVKCLLDLLSVGSKPYIL LTTISALIQKVLPKNAVSSSTLHIEAGKSLSMDELTLHLIEHGYVKSSTV VQEVGSFAVRGDIVDIFQAVNENPVRIYFDYDIVESIKFFDPDTQITCSE QILDIVIFSASELIKNDGNIARFSEKCSHLRSNNPPLYEAVVHRQKFEGE EQLLPLLQADALVTLFDYIQEAELVLSEATFSNIKQRIENIWEQNDTQDC TTHCTSLFLDLQSYEQVLARFHKILLCRFDSAPQSIVQNPATVALTKSTL ALLPDLKLQARERGCNIFSVTANHMQEAKKQVLLACYSEESMQYLVEKFK HFDMHISRVSSFSDITSKYSTAILPFQHDVETEDFIIITEHSLLGRQCSI KKARRTVTNNASELTIGDVVVHKDYGVGIFIALRTLTVCGSCHDFVEIKY RNDDKLFVPVEDTDLITKYGINTDVVLDRLGSSAWHDKQNKLKKRIDDIA KTLLHAEAMRKLADGSRFLPSSLYIDFCKECPYVETEDQLKAIADVENDL ARGKVMDRLICGDVGFGKTEIALRAAFLVVNEDITCQVAVLVPTTLLCRQ HFLAFKERFKNYKVNIQQLSKATAKKKQQIREGLEEGSINIIIGTSALLS DSIQFLDLRLLIIDEEQHFGVQQKEKLRLLKHDVHVLSLSATPIPRTLHM SLSNIKDLSILRTPPIGRTTVEISITHFDEKTIKTAILNEVNRGGRVFFT CPLIADIEPVLTRLQKLVPEVKIAVAHGGTAPLALDKIMNDFFDGKFSLL LTTSIIESGIDIPFANTIIIYNADMFGLAQLYQLKGRVGRSTTQGYAYLI LSNKATSNSPGMKRLEALKSLNSVGSGFALSLQDMDMRGFGNLVGEEQSG NIKEVGIELYHRMLEEALETCKMTTESSAVSCHNIKVDINANVRIPESYI QELELRMQVYKKISSLKTPEEISRYSEELKDRFGMPPREVINLLDIIHIK HLCARIGIAEITHFKNHLTLLFGRSFTPQESLLKYFVNNAGIFTMQGNSV NVLISAVHANNVTRYLIACLRKINSLLTHTPASKETKTD >APH_0939 mutL, DNA mismatch repair protein MutL MPIVVLSAQTINKIAAGEVIDCPASVVKELVENSIDAGAKTINVHVDKGG RNLISVSDDGCGIACEEMEKAFIGHATSKLIDGDLANVKTMGFRGEGLTA VASVARVKMVSKHVDAERAWSITFEGGEKTRDLTPGVLSCGTHVEVRDLF FATPTRLKFLRTEKAEMQNIVDLLNRLAMINYTIAFSLTIVERQIFKYSA QESLIERLKEMRAFGEVFCEQSLEINHSIDHVRVYGHIGLPTFNKSKPGM VHTFVNGRPIYSTLLLGAVKSAYHGLIPKDRHPVVVLALDVMPAYVDVNV HPSKMEVRFQDKRLVYKAVLDALGEALSSNVYARFSPAATTSEGHDHFAM DSIEKTYGKFFSEDTEAASTMQLQPEVLNHNIPLLFGSSHVDDSKGTHDT RFCADHTHHNDTKGSVHTKSFSARSSSSAESKMEQGCMLEEPPLGYAVCQ LFERYIISRAGDYVIIVDQHAAHERLVCEYIKKVTEQEGIKRQVLLMPEF IELGNEYELELLTEYREKLRDLGLIVEPMGDLTVVVREVPAIFGVVDAKA LISKILESIMAKGDELFVKGKLSHICGTVACYSSIRSGRIMKLEEMNSLL RHMESTPHSGQCNHGRPTYVKLKLSEIDKLFERT >APH_0411 mutM, formamidopyrimidine-DNA glycosylase MPELPEVEVIARSLADKIIGQRIRDVEVKRRDLRVRIADDFEQLVTGREI CSVYRVAKYLVMQLDSGAKLVFHMGMSGRILYMHAPVPEKHDCVVFAMQH GYSLVFNDTRRFGLVTLLDGEGYRSLLEKMGPDPFSEAFNADCLLNMHGK ARIKSVLMNSAVVVGIGNIYASEILFTAAILPHREVSTLSREECCRIVES TREVLKLAIATGGSSIRDYRTPTGDVGNFSKHFRVYGRKGEKCYTCGGEI QVEKQGGRSTFFCRHCQK >APH_0857 mutS, DNA mismatch repair protein MutS MSNNTEYTPVLRQYRALKEQYGECLLLYRLGDFYELFFEDAVIASKTLNI VLTKRGTDTPMCGVPYHSSESYIGRLVKSGYKVAVCEQIETAEEARKRSV RALVRREVTRIVTPGTLVEDSLLDAKENNYLACISNIGERYGVAWMELST GLFHVRASKLEDLDSEIQRLGPSELLISDKLKEQQSMELVLKRHRCAITS HNESFFDSKRAEKVLCGVYGVTTVQGLGDFEEVEVSACGSLLEYVRMTQR GSLPKLSYPKVRDSNSFVLIDGPALRNLELFSTQSGEKKGSLISTIDHTV TAMGSRMLKRYLAFPVACHNVINGRQDAVEFFVSNRSLCEVIRGVINGFP DIERILTRVKFSKCSPKDIHLLGRALSKIFELSRIISRSTHAIISKILVS LGDHRDLLKLISEVMLENNATITKDGGFINPGCNERLAELARIQNDSGVL IQRLRDKYRALTGISSLKILSNNLLGYYIEVSSSYKVSDESFVRRQSLAN STRYTTAELKELEERIVSAQSESADLEAQIFKGLCSRIADECQDIGLAAE AVAELDVLTTLAEVAVENNYVRPIVDDSKQFKIVRGRHPVVEVGTDFIAN DCDLSEGNSMSLITGPNMAGKSTFLRQNALIAVLAHIGSFVPAEHAHIGV IDKIFSRVGASDNIALGHSTFMVEMVETAAILNQATSKSLVILDEIGRGT AINDGLSIALAAIEHIHDVTKSRAICATHYHELPKLSSHFENIRFFCLRI EEWKGEVVFLHELIPGISSRSYGIHVAGLAGFPKGALERAKFFMSKFDEA EHYRSIDSIDITSGRHITDE >APH_0897 nth, endonuclease III MQKADIIFSRFFSDNPHPRIELQYRNEFTLLVAIVLSARTTDVSVNKITA KLFDVANSAKKMLALGESGLKRYINSIGLYNSKAKNIIQLSEIIENTYGG TIPRDFDALTALPGVGRKSANVFLNSCLGVPTIAVDTHVFRVSNRIGLVQ ESSVLGVEKSLEKVVPEKWKLYAHHWLVLHGRYVCKARTPLCGKCIVSDL CASKSVLLR >APH_0001 polA, DNA polymerase I MMEKKSFVIVDAYGFLFRAYYALPGLSTSYNFPVGGVYGFINILLKHLSF HDADYLVVVFDSGSKNFRHTMYSEYKTNRPKAPEDLSLQCAPLREAVEAF NIVSEEVLNYEADDVIATLCTKYASSNVGVRILSADKDLLQLLNDNVQVY DPIKSRYLTNEYVLEKFGVSSDKLLDAMALTGDASDNIPGVPSIGVKTAA KLINEFGSLDNVLNSVEQVAQKKCRDMLTEYADRAILSRDLISLCHDVEV EGDLEKYAKRVPDPVKLMAFLEKYELTSLEGKVAKYCKMVAAPIQSSEVV KKENEKCIDKLEEFLEQCQRSGLLGLYIEVEQGFISTIFAACDETRSFTV SSPEKVQKFVAAVTPILHSDSVLKVVYDAKSMMQFFPELRAFDDIMIMSY SLDTGHHDHGFDSMSQRHLGQIFGITNGCILIRLHRVIMRKLFSAKLYTV YYTLERPLVPVIYELEKTGIKIDTELLKQLSDEFSLSISNLEEEIFGLAG CKFNIASSQQLGKVLFEHMRIGGAKKMPSGSYCTNAEVLTALALDGVEVA DKILKWRHFTKLKSTYTDALVRQVDANTGRVHTKYSMTATATGRLSSSNP NLQNIPIRSKDGEKIRSAFIAEKGHKLIAADYSQMELKILAHIADVKAFR QAFAEGLDIHVVTAQQIFGEYYEIDYELRRRAKSINFGIIYGMGSYGLAR NIGISRREASEYVEQYFQYYPEIKRYMETTKAYAKKHGYTITAFGRKCFI EGINSPKRALSSVAERAAINAPIQGTAADIVKKAMVRLQDRLTQGTMLLQ VHDELLVEVPEEHVLSVARLMKEVMESAVVFSLPLDVNISVGDNWGDMVE IEV >APH_0356 priA, primosomal protein N' MIAEVLLPIPLDRPFYYLVPDEIQISVGDYVRVPFGNRVALGLVTDLKNS IESDLELKYIKDKLILPSMAPSFIKFIQWVSNYNIVPIGMVLKMVFAGMP RGKFMPLGGDLAQSTSVNDVNIEAGKLPQPSEDQSYACNYIVERSTGFSV TVLDGKTGAGKTEVYCTAAEKLLQECADAQVLVLLPEIVLATQLMKRIYS YFSTCNPVEWHSELTVKRRRENWLAVTRGTTSIVVGARSALFLPFKNLKM IIVDEEHESSYKQDSGMIYNARDMAIVLGKHVDIPVVLCTATPSLETMNN IQQKKYNHVVLKRRFGEAVMPDIIVADMRKDELKKAWMSTCLYEKICETL AKQQQVMLFLNRRGYARLVLCKQCGHKVNCPNCCTWLTEHRVLRAMLCHY CAYSCEIPRECPSCQEYNTMSPYGVGIERILEGIQELIPTARSVVLSSDI SAKQANSIVEQVLQGEVDIIIGTQIIAKGHNFPKLTLVGVIDADLGLGNS DLRATEKTYQLLHQVSGRSGRYKEKGQVVLQTYDPESAVIKSLLSSNRDD FYSVELKTRKVAEMPPYMRLVSIIISGREEIGVIAVANEIVASMAGKITV WGPAPAPLSLLNNMHRYRVLLKVTSISAIKSLLSECREKYKKLRNVRVVI DVDPMNFI >APH_0242 radC, DNA repair protein RadC MPESRDAERKRQQLGHRERLRQKILNGNGDGVFDYEVLELLLCSVRGRVD LKPVAKRLMERFGNLSQVLYADINELRKVKDMGDSSVAMLVCVREALIRV MRGNITSCVMLDKWPKLIDYLKVKIGNSTIENFLVLYLNKRYSLIADEVQ STGTVDETPLYIREVIRKALLCGAVYIVISHNHPSGDPKPSKADINVTNK LRIACNSMDIELVDHVIVTSKRHYSFKTHGLL >APH_1354 recA, recA protein MKDSPSDKQRAVDAAIGQIERAFGRGSIMRLQNSPVEAVECVSTGSIALD AALGVGGLPRGRIIEIFGPESSGKTTLALHVIAEAQKNGGACAFIDAEHA LDTLYARKLGVSVGDLIVSQPDTGEQALHIVEHLVNSGAVDVIVVDSVAA LTPRAEIEGDMGDQHMGLQARLLSHALRKLTSIVSKANCLLVFINQIRMK IGVVYGNPEVTTGGSALKFYTSIRLDIRKVSALKEKENVTGHLARVKVVK NKVAPPFKQAEFDIMYSEGISKVGEILDMGVRFGFIEKAGSYYSHEGIKL GQGRETARSYLKNNADLSHKLEGLIRAKLLESMRSSDVFGSDGRAPSEEI EESF >APH_1298 recG, ATP-dependent DNA helicase RecG MAIIHNSSSSPSNRVGKTAKLPEVPGMFSSIYDIQGVDNEKGLLLEKLCG GSRIVDLLLYAPYSYVDRRNSQLTPLSRRGSVVTFLGVAKKHVPPYKRRK SSKSPYKVQLGTEIGDIWLIFFNYSQPYLESVLEVGKQCLVSGKLEIHCG EMQITHPDYCTNNLKKFTEICALEPVYSVTKGLHSRVIHKLIKVALKSIQ AQHEWLPADLIEENSWLSWQESVYKMHTPENVEEVRRIKGRLAYDELMAY HAAVYFARQHGRRKGVALEVKGTNYQEVLKRLGFELTAGQKSAIREITRA QTSDQQMAKLLQGDVGSGKTVVALFAMLNTVESSGQVAVMVPTEMLAEQH CSWIKKLLEGMDICIELLTGKTKNKNTIHARLLSGEIHILIGTHALFQES VKFHNLRLVVIDEQQRFGVLQRMKLIEKGDSADILFITATPIPRTLEQIL YGNMDRITLKDKPACRLPVKTSIVKVCMIDDLCKRLKNMISREHKIYWIC PYIEGSEDNDVASVEERFEFLKNMFGNNIVGVSHGAMTQIGNESALQAFY AGNIKVLVATSIIEVGINVPDATIIVIENPERFGLSQLHQLRGRVGRGHQ QSYCILLHGPVSKIAYRKLSVLRDSHDGFHIAEQDLILRGGGDMLGCRQS GIAAFKFADAQDFHAMVKAHAAVSDIVKNEDGRKLAYRLTQIFGHSLPHI KY >APH_1165 recJ, single-stranded-DNA-specific exonuclease RecJ MLQSSAEEAVLCTGVSGAVWKVHNATYRDVLTIKQKFGLSEIVAHVLAIK RIPLDDIRDFLFPTLKLLLPDPFHLLDMGKAVDRILKAIYEKERIVIFGD YDVDGATSSAMLKRYFKSIGATAEVYIPDRLKEGYGPNPEALIKLRKKGC SLCITVDCGTVAHEPISVARAAGLDVIVVDHHIGSPTLPDATAIINPNRL DETSTYTYLSGVGTSFMLLIALNKTLRQAGYFQQENEPNLMNYLDLVALG TVCDVMPMLKLNRAFVKQGLKVMSERGNMGLRTLADAIGIEEKPSVYHLG FCIGPHINAGGRIGNSSLGARLLSSNDAIECNKIVTMLLDLNNERKEIEN RSLAEALAQAELLVDEGKNIIMVTGNWHVGVIGIIAGRIKERFFLPTIVI SLDGDMGKASARSVAGIDIGAAVLSAKFEKLIPEGGGHEMAAGFSVHRSQ IEPLYKFFLERFKDVNIQKALHASGILSTAGISSALCRELQLLEPFGPGN PEPKFVLRNVRIKNPAIIGESHIKCLIDDGSGASVRGMCFKCVGTELALG LLQGGIAVHLLGKVSMNQWRGNEYVQFIIDDLAFA >APH_0988 recR, recombination protein RecR MDISRLISLFSKLPGLGPASSRRIVLHLLRHRHDVMTPLANGIRELEEST KECEICFNLDVTSPCSICTDSRRDKSLLCIVEELGDLWAFEKGRIYQGMY HVLGGVLSALSGVGPEDLNMSSIPERVRLHGVKEVIVATGSDMDGQVTCH YIAQSIKSTGVKVTRLACGIPLGGEIDYLDEGTLRAALSSRYII >APH_0109 rnhA, ribonuclease H1 MDSGQVVIYTDGACSGNPGPGGWGAVFLFSGGEERRISGGCSDTTNNRME LSAVIEALGALDRQCNVCVRTDSVYVKNGITTWIHKWKSNGWQTASKSAV KNVDLWMQLEALTLKHNVTWEWVKAHAGNRYNVEADALARAEVERQVMKR >APH_1022 rnhB, ribonuclease HII MPNFSYEDSFSHGSNAIVVGVDEVGYGSIAGPVVAAAVYIPDRNVECIPN IKDSKLLTPKKRDALYKELLSHTVCGTGLASIDEIEEHNILVASHMAMRR ALENLNLQRIDLVLVDGSRELKSQWPSKSIINGDELSISIAAASIVAKVT RDNMMRELHDQYPEYHWNKNCGYGTAAHILALKQHGATPLHRKTFAPVKK CIISTKNQDK >APH_0167 ruvA, Holliday junction DNA helicase RuvA MIGTLSGIIEEVQDTSIILAVGGVGYIVHVSYRTLINCKRGDSIKLYIET YVNRDNVPQLYGFTDTEEQNCLKMLIKVSGINYRTALAILDRLTPDQLFS AIVNEDKAALKVGGVGAKLINRIFTELTPLVQKLEFNIMDKRGPSVEDSD ALSALLSLGYEKTRVLNALEKVGVSHNLSDTVRFALKELSK >APH_0166 ruvB, holliday junction DNA helicase RuvB MNELLHQHKAIPEDERNFALRPSLIEEFVGQSEIIENLKVFIKSAYERRA TLDHVLLYGPPGLGKTTLAHIIAKELKVSLRSTSGPLLSKAGDLAAILTN LQPMDVLFIDEIHRLHRNIEEILYSAMEDCCLDIVVGEGCGARTLRIDLP AFTLVGATTRFGLISNPLRDRFGIPLHLEFYSVEELMLVIKRAAHVICTD IDDSGAYEIASRSRGTPRIALRLFRRVRDFMVVERQSIIDNHFADSALFN LGVDKSGLDKMDIKYLSFIYEAKNAVGIETIAAALSEDVGNIEETIEPYL LKIGFIQRTPRGRILTTKAIEHLMNYKYI >APH_0018 ruvC, crossover junction endodeoxyribonuclease RuvC MLVFGLDPGLNYTGWAVVLKEPSGSLSLLDTGTICTTSCSDLNDKLFCIF SGLSAIIQKFSVSVASIENVFVNLNPKASMFLCYARAASLLACLSSNVKI FEYSPTKIKKCVFGNGRASKEQIAFVVRSSLGLSEDASFSSHASDAIAAA LCHIFSSGNRYGI >APH_0465 ssb, single-strand binding protein MSSIGVNKVILIGYLGKDPDVRVMQNGKEMANFSLATSESWLDKASGSRT EKTEWHNIVVFSEGLVKVVKTCARKGSKVYLEGSLRTRKWVDQNNNDRYT TEVVLQGFNSTLCLLDPKGMSSGDAAASSIGAPPASSEEAGSFGGGVDFL DPDVDEIPF >APH_0597 topA, DNA topoisomerase I MGVVIVESPSKAKTISKYLGKKFNVIASFGHIRDFPAKSGSVDPSNDFKM IYEIIPKSEKHLDKIVKTVSAEKEAIYLATDPDREGEAIAWHIVEVLKEK CAIAKDVTVNRMVFNEVTKRAVTAAVDNCRPINMDLVRAQQTRRVLDYLV GFTLSPLLWRKLPGSRSAGRVQSVALRLLCEREYEVEQFKTQEYWDVGVD LQNQGGEKFEAVLKCYAGEKLEKFSIGTEEQAKEYAETVKNQSYTVESVE SKKTKRNPYPPFITSSLQQEASTKLGFSAKNTMMIAQKLYEGIDIGGEIV GLITYMRTDGFYISEDAVNYIRDTIKMQFGEKYLSKSVRNYTKKVKNAQE AHEAIRPTDITMLPEQLSKYLTDEQLKLYTLIWKRTLATQMESAVIDQVA VDIKSSCGKISLHATGSTLSFDGYYRVYGSEDSDKRRMLPQLREGESCEL LEVHPNQHFTQPPARYSEASLVKKMEEIGIGRPSTYATIISVLQERGYTQ LEQKRFIPSERGRIVNAFLTNFFRKYVEYDFTANLEEELDLISNGKMVWK EVLSQFWDKFISDVSSVKTIEASEILKAITRDLENYAFSSVDGESISRVC PQCGSGELMLNIGKTSAFLGCNRYPECRYTRGIGGDGSASPADDASRILG IDEETQEEIFLKRGPYGEYLQLGNSTKRVSLTKSAGEITVDLAKKMLSLP LVLGCYPDTDKEIKLGIGRFGPYLFYNGVYFSIKDREDYINISHQEAVEI IDKQSDKKAKLLGQNKDGKDIYVCKGRYGFYLKCDKTSVALKGRSEDITL EDAILLLSQKQ >APH_0537 uvrA, excinuclease ABC, A subunit MAKGVISIRGARVHNLRNVDVDLPKNKLIVITGVSGSGKSSLAFDTLYAE GQRRYVESLSSYTRQFVNLQAKPDVDSIEGLSPAISVSQKTAGKNPRSTV STVTEIHDYLRLMFARVGVPYSPTTNRPIVKFTASRMVKEIANLPPGARV YLLAPIAQDKHTEYVKEISNIRKQGYVRISIDGVVYDINEIPKLEHNKRY DISVVVDRLVITGERSNRISSSVENALAVGHGVLCVKIVTLPGDYTDGEY VEGQVLVFSEHFLCPDSGFNVGAIEPKLFSFNIVNSACQYCMGLGRSRAV DVNMLVPNVELSIIEGAIDPIGPVKPACYSSYESTFVHKCCTEILAIAKK FGIDIAQPWHRLDLKSRNLLMFGNEEGDLNAAKVGNFKGVVGYLSDTGNV VAEKIAERYSVFRKCPHCAGFRLSPQALSVKIDGKHIGNVCAMTVSETIE WCEGLPARLTDFEKQICSKLLDEIIRRLTFLSNVGLGYLTLDRESRTLSG GESQRIKLASHVGSSLTGVLYVLDEPSIGLHQRDNALLIETLKNLRDLEN TVVVIEHDEETMMHADHIVDVGPGAGVNGGQIVAQGSLEEILSNTDSITG RFLSGKMDIPISDCNKTFSKWIKIRGAYKNNLKNVDVTIPIGGFTCVTGV SGSGKSSLIGDILYPYALHKVYGVTPPPTECAGILGLENIDKVIEIDQSP IGRTPASNPATYVGLFTHIRSWFAGLPLAKSRGYTMSRFSFNAKGGRCES CKGDMYMKIEMHFLPDMYVTCEECNGLRYNRETLEVLYKGKSIADVLDMT VDQALDFFSAIPLIREKLESLQSVGMGYIKIGQPSTTLSGGESQRIKMSK ELSKRSTGNTLYILDEPTTGLHISDIQNLLQILHRLSDMGNTVVVIEHNL HVIKTADYIIDIGPEGGTHGGEVVGVGSPHELVKNYPNSITAKYLAPYLK SAKS >APH_1367 uvrB, excinuclease ABC, B subunit MRHFKITSEFDAAGDQPEAIRKLSEGIERGVREQVLLGVTGSGKTFTMAS VIEKRQCPALIVAHNKTLAAQLYEEMRMFFPNNAVEYFVSYYDYYQPEAY IPHSDVYIEKDALINEKIDMLRHSATRSILERRDVIVVASVSCIYGLGSP ELYSEMTIPLSIGMQIDLCQLKEKLVELQYKSGSQCERGTFSVKGDIVTI FPSHHEDHVWRISMFGDVIESIQEVDNNLGIAVANLEKVKVFPNSHYVTP RPTLMQALSRIEEELQECVINYRKNNKIIEAERILERTKFDIEMMKETGT CKGIENYSRYLCGKAAGEPPNTLLDYLPVDSLMFIDESHITIPQIRSMYN GDRVRKANLITHGFRLPSALDNRPLTFEEWESRKTTLVYVSATPGKYETE RTSGVVVEQLIRPTGLVDPICIVKKASGQIADVVNESQATISEGYRVLVT ALTKKMAENLSEHMREIGIKVAYLHSDVKTLERMDIIAQLRTGEIDVLIG VNLLREGLDIPECALVCILDADKEGFLRSETSLVQTIGRAARNMNGRVIL YADRVTKSMKAAIDETNRRRAVQESYNKAHGITPKSISKSVATSLKDRIT VKGTKGSKSKSAAVTEEDIIKLQKEMLLHAENLEFEKALEIRNQINKLSQ HKT >APH_0884 uvrC, excinuclease ABC, C subunit MKNSNERLNDAFYALKKATCSVRKSVPGVYKMFGTEDRLLYVGKAKDLKK RLSSYLSINRMSVNVYTMVKQIVRLEITVTENETEALLLEAKLIKSLKPK YNIIMRDDKFYPYILFSKHKYPRIVLHREKRSEGRYTGLYGPFLSSVMTR HIIATIKKAFLLRSCPDNFFATRARPCIEYEIKNCSAPCMQKITEEDYAK AVQMAHKALTGQSKEIQCELFEMMCRFSNNQDYESAIVCRDRLHALKSMK ECMGFQTGIHGDVDFIAVYKRQDLYCMQVVFFRDGVNYGSQPYFIESVGN ASDADIVNMFMLQIYNDFPSVVYVDLPSDYDTNIMSTAIKQLMKREVDIR LPATRDELKAMGLARNYAMEALNRRVRNTAQDTDLEEFATFFDLLKAPER IEIYDNSHISGTHPYGVMVVCGKDGLLKKEYRKFKINTVTNGDDCSMMHE VISRRFKEIPDVLPDFILIDGGRGQRSAVYGELSRLGIPFACIAKGPGRV AGTEVFYFSNGEKLSLDPASKLMHFLCRLRDEAHRFAITSHRKSRDGKLQ FSTLLNDIPGIGKTKGKAILAYFGSIQAMKHARVEEISKVPGISLKLAKR VADYLKESQTTLRA >APH_0200 xerC, tyrosine recombinase XerC MQNGVRIVVAVTNLYDVVDAWVKCLEEEKRYSKHTVAAYLRDIRDFLQVV YGLRQEKSVVLITEMENLPMTEFRRWITIRCNQGKQSVSNLRAISAIRNF FRYLQRNHGIKNDVVFHIVNPIVRKGLPKVLEKSHVLKMVSENIHWTSRR DAAIVALLYGCGLRISEAVGLRFGDLEADAVRVLGKGKKERIIPILPWVQ KLLDGYVESCPFHGTGCGNKASYVFLGVRGKVLDRTYFAHRMQALRRNMG LPESTTPHALRHSFATHLFLEGADIRVIQELLGHENLSTTQIYTHLDHKS IIDNYMGFHPQTVKKNSSA >APH_0040 xerD, tyrosine recombinase XerD MGDDYIIRSFLEFLVSSKGVSENTVCSYKCDLEDLSQFLRRNGLKIVDAS YGDLCEYIRNLNGRAYSAATVARRVSAIKGLCSFLYKDRIVHSDLSLSLE SCRLGRTLPRVISESDIGMLLDIAKADLSAEGKRLYAIVNILYSSGVRIS ELIHLGFFEIDAMLHEHVGDIGYIIIKGKGNRERLVLLNEVAMDSIRAYL EVRKCFIAGENTESRWLFPGAKYDQCISRQRVGQLLKELAISAGIDPEKV SPHKFRHSFATHLLNNGSNIVFIQKMLGHVNLSTTQVYTHVASEQLRDVL SRFHPMSKSKN >APH_1322 xseA, exodeoxyribonuclease VII, large subunit MQVTLLRSFSNDIPEFTVTEITGVLQRFMQETFYSIKVRGEISGLSRPNS GHVYFTLKDSNSVINAVCWNGTRLKVQFCDGLEVVCTGYLSVYQSKYQLI VTDMTLAGYGKLAAMLAELKKKLELEGLFSPARKKKLPFLPTKIGVITSP TGAVISDIISRVKQRFPSNVVVWPVQVQGDRASAMVIEAIKGFNSFADPP HVIIVARGGGSFEDLWPFNDEELARTVAASKIPIVSAIGHETDFTIIDYA ADLRASTPTAAVELVLPEKSKLVASINEKFVRTKISFERIVKMQEYRLLR LHGILTEKKNSLLQKSRVALEYQQKIRYLLQVSLLRKRQYLESLMQRLSY YDSKHILSVGYAIVRDEHEKQISSVEALSTNDTITIELKDGKRRAIII >APH_0079 xseB, exodeoxyribonuclease VII, small subunit MSIHISSKFEEAMKELENIVAELESGNVPLERSVELFNKGKELHKYCDKV IKEISLHIESVDPDDKELSAKFSDD >APH_0505 xth, exodeoxyribonuclease III MIRVITWNVNSIRKRIEHLCSVLSEHSIDVAMLQEIKCTNEQFPFVELEA LGYKCYVHGQKSRNGVAIISKLPVVEVVSYSVLDEGKELESAGSYSSEES RYIECTLECTGNKKIRVVSVYVPNGQEVESETFFYKLKFLEHLKDRLLNI MKTEDFLIAGGDFNVAPEEIDVHDPKALDGRLCFHILERAKFREILNNGI VDIFRTFVGIDRKEFSWWNYREGGWQNNRGLRIDALLSSPQIADKVLDCS ILSKVRGWDTPSDHAPVMGDIDV