Gene list
Applied filters:
COG category: Replication, recombination and repair
Gene type: CDS
Gene type: CDS
Gene type: CDS
Genomic element: chromosome 1
Number of genes found: 24
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Photobacterium profundum, ss9 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | PBPRA0243 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 247372 | 1455 | - | 0.274914 |
NA | PBPRA0051 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 50663 | 699 | + | 0.416309 |
NA | PBPRA0206 | putative formamidopyrimidine-DNA glycosylase | RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; | chromosome 1 | CDS | 213233 | 810 | + | 0.474074 |
ALL3135 | PBPRA0214 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 221099 | 918 | + | 0.339869 |
CBU1270 | PBPRA0083 | Transposase and inactivated derivatives [Azotobacter vinelandii] | SubName: Full=Transposase and inactivated derivatives [Azotobacter vinelandii]; | chromosome 1 | CDS | 84826 | 1017 | + | 0.417896 |
CBU1270 | PBPRA0080 | Transposase and inactivated derivatives [Azotobacter vinelandii] | SubName: Full=Putative transposase; SubName: Full=Transposase and inactivated derivatives [Azotobacter vinelandii]; | chromosome 1 | CDS | 82353 | 1017 | + | 0.415929 |
CV3079 | PBPRA0202 | putative DNA repair protein RadC | RecName: Full=UPF0758 protein PBPRA0202; | chromosome 1 | CDS | 211238 | 675 | + | 0.422222 |
DAM | PBPRA0283 | putative DNA adenine methylase | SubName: Full=Putative DNA adenine methylase; | chromosome 1 | CDS | 297828 | 837 | + | 0.415771 |
PLU0002 | PBPRA0009 | Putative DNA polymerase III, beta chain | RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; | chromosome 1 | CDS | 8790 | 1101 | + | 0.440509 |
PLU0004 | PBPRA0011 | Putative DNA gyrase, subunit B | RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; | chromosome 1 | CDS | 10993 | 2418 | + | 0.438379 |
PLU4759 | PBPRA0257 | putative primosomal protein N` | SubName: Full=Putative primosomal protein N; | chromosome 1 | CDS | 263909 | 2202 | - | 0.450954 |
RB787 | PBPRA0245 | hypothetical transposase | SubName: Full=Hypothetical transposase; SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 249960 | 1197 | - | 0.431913 |
RB787 | PBPRA0104 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 104704 | 1281 | + | 0.42623 |
S3908 | PBPRA0091 | putative ATP-dependent DNA helicase Rep | SubName: Full=Putative ATP-dependent DNA helicase Rep; | chromosome 1 | CDS | 94145 | 2022 | + | 0.417408 |
S4007 | PBPRA0010 | Putative RecF | RecName: Full=DNA replication and repair protein RecF; | chromosome 1 | CDS | 10011 | 963 | + | 0.436137 |
S4077 | PBPRA0187 | putative ATP-dependent DNA helicase RecG | SubName: Full=Putative ATP-dependent DNA helicase RecG; | chromosome 1 | CDS | 191928 | 2094 | - | 0.492837 |
SO2276 | PBPRA0081 | transposase and inactivated derivative [Vibrio vulnificus YJ016] | SubName: Full=Putative transposase; SubName: Full=Putative transposase and inactivated derivative; SubName: Full=Putative transposase and inactivated derivative [Vibrio vulnificus YJ016]; SubName: Full=Transposase and inactivated derivative [Vibrio vulnificus YJ016]; | chromosome 1 | CDS | 83654 | 564 | - | 0.446809 |
SO2276 | PBPRA0078 | transposase and inactivated derivative [Vibrio vulnificus YJ016] | SubName: Full=Putative transposase; SubName: Full=Putative transposase and inactivated derivative; SubName: Full=Putative transposase and inactivated derivative [Vibrio vulnificus YJ016]; SubName: Full=Transposase and inactivated derivative [Vibrio vulnificus YJ016]; | chromosome 1 | CDS | 81181 | 564 | - | 0.443262 |
SO2874 | PBPRA0082 | transposase and inactivated derivative [Vibrio vulnificus YJ016] | SubName: Full=Putative transposase; SubName: Full=Putative transposase and inactivate derivatives; SubName: Full=Putative transposase and inactivated derivative; SubName: Full=Putative transposase and inactivated derivative [Vibrio vulnificus YJ016]; SubName: Full=Putative transposase and inactivatedderivatives; SubName: Full=Transposase and inactivated derivative [Vibrio vulnificus YJ016]; | chromosome 1 | CDS | 84219 | 471 | - | 0.414013 |
SO2874 | PBPRA0079 | transposase and inactivated derivative [Vibrio vulnificus YJ016] | SubName: Full=Putative transposase; SubName: Full=Putative transposase and inactivate derivatives; SubName: Full=Putative transposase and inactivated derivative; SubName: Full=Putative transposase and inactivated derivative [Vibrio vulnificus YJ016]; SubName: Full=Putative transposase and inactivatedderivatives; SubName: Full=Transposase and inactivated derivative [Vibrio vulnificus YJ016]; | chromosome 1 | CDS | 81746 | 471 | - | 0.414013 |
STM3976 | PBPRA0122 | putative tatD gene product | SubName: Full=Putative tatD gene product; | chromosome 1 | CDS | 124833 | 714 | + | 0.491597 |
T3950 | PBPRA0152 | conserved hypothetical protein | RecName: Full=Ribosomal RNA small subunit methyltransferase D; EC=2.1.1.171; | chromosome 1 | CDS | 152940 | 606 | - | 0.429043 |
VV0011 | PBPRA0008 | Putative DnaA chromosomal replication initiator protein | RecName: Full=Chromosomal replication initiator protein DnaA; | chromosome 1 | CDS | 7364 | 1425 | + | 0.430175 |
WAVC | PBPRA0210 | conserved hypothetical protein | RecName: Full=3-deoxy-D-manno-octulosonic acid kinase; Short=Kdo kinase; EC=2.7.1.166; | chromosome 1 | CDS | 217087 | 711 | + | 0.469761 |