Gene list
Applied filters:
COG category: Transcription
Gene type: CDS
Gene type: CDS
Gene type: CDS
Genomic element: pCP301
Number of genes found: 8
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# Shigella flexneri 2a str. 301, 301 >CP0217 orf, hypothetical protein ATGCAAATGAAAAACAATACCGCACAAGCAACAAAAGTAATTACCGCGCA TGTGCCATTACCTATGGCTGATAAAGTCGACCAGATGGCCGCCAGACTGG AACGCTCCCGGGGCTGGGTTATCAAACAGGCGCTTTCTGCATGGCTTGCC CAAGAGGAGGAGCGTAATCGCCTGACGCTGGAAGCCCTGGACGATGTGAC ATCCGGACAGGTTATCGACCATCAGGCTGTACAGTCCTGGGCGGACAGCC TCAGTACTGACCATCTGTTACCGGTGCCACGCTGA >CP0059 orf, conserved hypothetical protein ATGGAAATAAATGTCACCGCGCCAGCATTGTTGACGGATGAGCATATACT TCAGCCATTTGACTGTGGAAATGAGGTGCTAAGTAACTGGTTACGTGGTC GGGCTATGAAAAACCAGATGCTCAATGCTTCTCGCACGTTCGTTATTTGC TTGGAGGATACTTTACGTATTGTGGGATACTACTCATTAGCTACTGGTTC CGTCACTCATGCCGAGCTTGGTCGCAGTTTGCGGCATAACATGCCCAATC CTGTCCCTGTTGTTCTGTTAGGGCGTCTGGCTGTTGATGTTTGTACCCAG GGGCATGGTTTCGGTAAATGGCTACTAAGTGATGCCATTCACCGGGTTGT CAATCTGGCTGATCAGGTTGGCATTAAGGCTGTTATGGTACATGCAATTG ATGATGACGCCAGAGCATTTTATGAGCGTTTTGGTTTTGTTCAGTCAGTT GTGGCACCTAATACCTTGTTTTATAAAGTCTGA >CP0100 orf, conserved hypothetical protein ATGTCCTGGTTAATATCTCAGTGTGCTCATCAGTGCACTGATAATAAAAA GACGGAGACAGATGCCATTTACGATAAAGTTCGGAGTTCTTATTTGCTTT CATGTATTCTGAAAAAAAACAAAAATGTTGGGCTTATTCTTCATGCACCA TCATTTGTTTCTGTGTCTGAAAAAATCGCCAGAATTGTGATGGCAAATTA CTCCCGTAACTGGAGTAATTCCGAGTTGGCCAGTGCGGTTTTAATGAGTG AATCTTCTTTAAAAAGAAGAATGTACAAAGAGGTCGGTTCTATAAGTACA TTTGTACATAAAATAAAGCTTACAGAAGCTATCAGGAAATTACGAAGGAC AAATACTCCCATTTCTGTCATATCATCTGAGTTAGGTTACAGTTCACCAT CGTATTTTTCTAAAGTCTTCTTTAAATATTTAAAGACATACCCTCAAAAC ATAAGGAAGAAAAATGGTCGGTAA >CP0109 orf, conserved hypothetical protein ATGGGATGTGTAACTGCACCAGAACCTTTATCCTCATTTCATCAGGTCGC TGAATTTGTCAGCAGTGAAGCTGTACTTGATGACTGGTTAAAGCAGAAGG AGCTAAAAAATCAGGCAATCGGAGCCACCCGGACTTTTGTTGTATGCAGA AAAGGTACGCAACAAATAGTCGGTTTTTACTCACTGGCCACTGGTAGTGT CAATCATACAGAAGCTACAGGTAACCTTCGGCGCAATATGCCAGACCCCA TTCCTGTAATTATACTTGCACGCCTGGCTGTAGATGTGTCATTTCGAGGA AAAGGGCTTGGCGCGGATTTACTTCATGATGCAGTTCGTCGTTGTTACAG GGTTGCCGAAAATATCGGTGTGCGTGCAATTATGGTTCATGCGCTTACGG AAAACGCAAAACAATTTTATATTCATCATGGTTTTAAGCCATCAAAAACT CAGGTGCAAACATTGTTTCTTAAACTCCCTCAATAG >CP0144 mxiE, MxiE, similarities to transcriptional activators of the AraC family, function unknown ATGGAAGGGTTTTTTTTTGTCCGAAATCAAAATATAAAATTCAGTGATAA TGTGAACTATCATTATCGCTTTAACATTAATAGTTGTGCAAAATTTCTTG CTTTTTGGGACTATTTCAGTGGTGCTCTAGTAGAGCATAGCCATGCTGAA AAATGTATTCATTTCTATCATGAGAATGATCTTCGGGATAGTTGTAATAC CGAATCGATGCTTGATAAGTTAATGTTAAGATTCATCTTTTCATCTGACC AGAATGTAAGTAATGCACTGGCTATGATACGAATGACTGAGTCATATCAT TTGGTTCTTTATCTTCTGAGAACTATTGAGAAAGAAAAGGAGGTAAGAAT AAAGAGTCTGACAGAGCATTATGGTGTGTCGGAGGCTTATTTTAGATCTT TATGTAGAAAAGCTTTAGGGGCAAAAGTCAAAGAACAACTGAACACTTGG CGGTTAGTAAATGGTTTATTAGATGTATTTTTGCACAATCAAACAATCAC TTCAGCTGCCATGAATAATGGGTATGCATCAACATCCCATTTTTCAAATG AGATAAAAACACGACTAGGCTTTTCTGCAAGAGAATTATCGAATATTACT TTTTTAGTGAAAAAAATAAATGAAAAAATTTAA >CP0032 parB, plasmid segregation protein ATGGAAAACAGAAAGCACCGACCGACTATTGGCCGTACGCTGAATACAAA TATCCTGAATAATACTGAAGAAATATCGGCTCCAGTTCATGTATTTACCC TCAATACTGGCCGAAAGGCAAAATTTACTGAGATCAAGGTTGATCATGAC AAAGTGGATACTCAAACTTTTGTGGTCGAAGAGGTGAATGGCCGCGAACA GACAGCCCTGACGCCGGACTCACTAAAAGACATCACCAGAACTATACGTT TACAACAATTCTATCCATGTATTGGGATTCGGACTGGCGATCTTATTGAG ATTTTGGATGGTTCCCGTCGTCGGGCAGCAGCTTTGCTATGCAAGGTTGG ATTACGTGTACTTGTAACGGATGATGAGCTTACTGTTTCTGAAGCTCAGC ATCTGGCGAAAGATTTGCAGACGTCACTTGAACATAATATTCGTGAAATT GGGTTGCGTTTAGTACGTCTCAAAGAGGCCGGTATGAACCAGAAGCAAAT TGCGGAAAGAGAGGGATTGTCGGCAGCTAAGGTGACTCGTGCCCTCCAAG CAGCGTCCGTACCTAAAGATTTTGTGTCTCTTTTTCCTGTTCAGTCTGAG CTGACATACGCCGATTACAGGCAACTGGCTGAATTAAGTGAACGACTGAG GCTGGGTGATATATCTATTGATGAAGTTGTGAAGAATATCTCGCCGAGTA TTGAGCTTATTACTGCTGATGACAATCTTTCTGAAGACGAGGTTAAAAAC AGTATTATGCGGCTTATAACCAAGGAAATGTCTTCATTGCTTGATTCAGG AGTAAAGGATAAAGCGGTTGTAACTTTGTTATGGAAATTTGATAGTAAAG ATAAATTTGCTCGAAAACGAGTAAAGGGACGTACGTTCTCATATGAATTC GGCAGATTACCGTTGGAAGTTCAGGATAAGTTAGATCGTATGATTGCTCT TGTACTAAAAGATAATCTGAATTCGCTGTGA >CP0123 virB, VirB, transcriptional activator required for tanscription of the ipa, mxi, and spa operons ATGGTGGATTTGTGCAACGACTTGTTAAGTATAAAGGAAGGCCAAAAGAA AGAGTTTACACTCCATTCTGGTAATAAAGTTTCCTTTATCAAAGCCAAGA TTCCTCATAAAAGGATCCAAGATTTAACCTTCGTCAACCAAAAAACGAAT GTACGCGATCAAGAATCCCTAACAGAAGAATCATTAGCCGATATCATAAA AACTATAAAGCTACAACAATTCTTCCCTGTAATAGGAAGGGAGATTGATG GTAGAATTGAAATTCTGGATGGCACTCGTAGAAGAGCATCTGCAATATAT GCAGGAGCAGATCTTGAAGTTCTATATTCAAAAGAATATATATCTACTCT TGATGCCAGAAAACTAGCAAACGATATACAAACAGCAAAAGAGCATAGCA TCCGAGAACTTGGTATTGGTCTTAATTTTCTGAAAGTATCAGGGATGTCC TATAAAGACATAGCCAAAAAAGAGAATCTGTCTCGCGCGAAAGTCACTCG TGCCTTTCAGGCAGCAAGCGTTCCACAGGAAATAATATCTCTATTTCCAA TCGCGTCAGAACTTAACTTTAATGACTACAAGATATTATTCAATTATTAT AAAGGACTTGAAAAGGCTAATGAATCTCTTAGTTCTACACTACCAATATT AAAGGAAGAAATAAAAGACCTTGATACAAATTTGCCCCCGGACATATATA AAAAAGAAATTTTAAACATCATAAAGAAAAGCAAAAACAGAAAGCAAAAC CCTTCGCTAAAAGTTGACTCGTTATTTATTTCTAAAGACAAACGGACTTA CATAAAAAGAAAAGAGAATAAAACAAACAGAACTCTAATATTTACATTAT CTAAAATAAACAAAACAGTTCAGAGAGAAATAGATGAAGCTATTCGGGAT ATAATTTCTCGCCATCTATCGTCTTCATAA >CP0046 virF, VirF, member of the AraC family of transcriptional activators, required for transcription of virB and icsA ATGATGGATATGGGACATAAAAACAAAATAGATATAAAGGTTCGCTTGCA TAACTATATTATTTTATATGCAAAAAGGTGTTCAATGACGGTTAGCTCAG GCAATGAAACTTTGACTATCGATGAAGGGCAAATTGCTTTTATAGAGCGA AATATACAAATAAACGTCTCCATAAAAAAATCTGATAGCATTAATCCATT TGAGATTATAAGCCTTGACAGAAATTTATTATTAAGCATTATTAGAATAA TGGAACCAATTTATTCATTTCAACACTCCTATTCTGAGGAGAAAAGGGGG TTAAACAAAAAAATATTCCTCCTCTCTGAGGAGGAGGTTTCTATCGATTT GTTCAAATCTATAAAAGAGATGCCTTTCGGCAAAAGAAAGATCTATAGTT TAGCTTGCCTTTTATCAGCTGTTTCTGATGAGGAAGCTTTATATACTTCG ATATCGATAGCTTCTTCTCTTAGTTTTTCTGATCAGATAAGGAAGATTGT TGAAAAAAACATCGAGAAGAGATGGCGTCTTTCTGATATTTCAAATAACT TGAATTTATCAGAAATAGCTGTTAGAAAACGATTGGAGAGTGAAAAATTA ACATTTCAACAAATCCTTCTTGATATTCGCATGCATCATGCAGCAAAGCT TTTATTGAATAGTCAAAGCTATATTAATGATGTATCAAGACTTATCGGAA TATCAAGCCCATCTTATTTTATAAGGAAATTTAATGAATATTATGGTATA ACTCCAAAGAAATTTTACTTATATCATAAAAAATTTTAA