Gene list
Applied filters:
COG category: Carbohydrate transport and metabolism
Gene type: CDS
Gene type: CDS
Gene type: CDS
Genomic element: chromosome
Number of genes found: 105
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Synechococcus sp. JA-2-3Ba(2-13), JA-2-3Ba(2-13) | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | CYB_2304 | phosphoglucomutase/phosphomannomutase family protein | SubName: Full=Phosphoglucomutase/phosphomannomutase family protein; | chromosome | CDS | 2413980 | 1632 | - | 0.637255 |
NA | CYB_2682 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 2767423 | 588 | + | 0.602041 |
NA | CYB_2305 | transporter, major facilitator family | SubName: Full=Transporter, major facilitator family; | chromosome | CDS | 2415751 | 1287 | - | 0.581974 |
NA | CYB_2064 | transporter, major facilitator family | SubName: Full=Transporter, major facilitator family; | chromosome | CDS | 2160617 | 1545 | + | 0.621359 |
NA | CYB_1375 | glycosyl hydrolase, family 31 | SubName: Full=Glycosyl hydrolase, family 31; | chromosome | CDS | 1444119 | 2463 | + | 0.634592 |
NA | CYB_2874 | NAD-dependent epimerase/dehydratase family protein | SubName: Full=NAD-dependent epimerase/dehydratase family protein; | chromosome | CDS | 2970578 | 957 | + | 0.571578 |
NA | CYB_0790 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 816611 | 900 | - | 0.612222 |
NA | CYB_0014 | phosphoglucomutase/phosphomannomutase family protein | SubName: Full=Phosphoglucomutase/phosphomannomutase family protein; | chromosome | CDS | 15045 | 1404 | + | 0.600427 |
NA | CYB_1145 | D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family protein | RecName: Full=Probable phosphoketolase; EC=4.1.2.-; | chromosome | CDS | 1182311 | 2376 | + | 0.598906 |
NA | CYB_0955 | glycosyl hydrolase, family 57 | SubName: Full=Glycosyl hydrolase, family 57; | chromosome | CDS | 993210 | 2208 | + | 0.611413 |
NA | CYB_0183 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 197581 | 438 | - | 0.563927 |
NA | CYB_1147 | glycosyl hydrolase, family 57 | SubName: Full=Glycosyl hydrolase, family 57; | chromosome | CDS | 1186153 | 2592 | + | 0.595293 |
NA | CYB_2167 | CAAX amino terminal protease family protein | SubName: Full=CAAX amino terminal protease family protein; | chromosome | CDS | 2270083 | 1584 | + | 0.604167 |
NA | CYB_0326 | polysaccharide deacetylase family protein | SubName: Full=Polysaccharide deacetylase family protein; | chromosome | CDS | 342764 | 1101 | + | 0.542234 |
NA | CYB_1203 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1247141 | 483 | - | 0.567288 |
NA | CYB_0632 | alpha-glucan phosphorylase, putative | SubName: Full=Alpha-glucan phosphorylase, putative; | chromosome | CDS | 642012 | 2157 | - | 0.598516 |
NA | CYB_1020 | phosphoglycerate mutase family protein | SubName: Full=Phosphoglycerate mutase family protein; | chromosome | CDS | 1058903 | 1344 | + | 0.601935 |
NA | CYB_0561 | transporter, drug:H+ antiporter-1 (12 spanner) (DHA1) family | SubName: Full=Transporter, drug:H+ antiporter-1 (12 spanner) (DHA1) family; | chromosome | CDS | 570229 | 1302 | + | 0.602919 |
NA | CYB_0169 | polysaccharide deacetylase family protein | SubName: Full=Polysaccharide deacetylase family protein; | chromosome | CDS | 180951 | 2172 | - | 0.620166 |
NA | CYB_0275 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 290738 | 528 | + | 0.5625 |
NA | CYB_0851 | NAD-dependent epimerase/dehydratase family protein | SubName: Full=NAD-dependent epimerase/dehydratase family protein; | chromosome | CDS | 884301 | 957 | + | 0.611285 |
NA | CYB_2295 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2399770 | 648 | + | 0.555556 |
NA | CYB_2384 | pyruvate kinase barrel domain protein | RecName: Full=Pyruvate kinase; EC=2.7.1.40; | chromosome | CDS | 2486295 | 1431 | - | 0.636618 |
NA | CYB_0378 | histidine triad family protein | SubName: Full=Histidine triad family protein; | chromosome | CDS | 394086 | 342 | + | 0.570175 |
NA | CYB_0060 | putative UDP-sulfoquinovose synthase | SubName: Full=Putative UDP-sulfoquinovose synthase; | chromosome | CDS | 71168 | 1152 | + | 0.584201 |
NA | CYB_1374 | glucose/sorbosone dehydrogenase family protein | SubName: Full=Glucose/sorbosone dehydrogenase family protein; | chromosome | CDS | 1442816 | 1095 | - | 0.63105 |
NA | CYB_0127 | putative polysaccharide deacetylase | SubName: Full=Putative polysaccharide deacetylase; | chromosome | CDS | 140385 | 684 | + | 0.603801 |
NA | CYB_0688 | mannose-6-phosphate isomerase family protein | SubName: Full=Mannose-6-phosphate isomerase family protein; | chromosome | CDS | 705026 | 432 | - | 0.581019 |
NA | CYB_1929 | NAD-dependent epimerase/dehydratase family protein | SubName: Full=NAD-dependent epimerase/dehydratase family protein; | chromosome | CDS | 2012676 | 948 | - | 0.621308 |
NA | CYB_2283 | mannose-6-phosphate isomerase | SubName: Full=Mannose-6-phosphate isomerase; EC=5.3.1.8; | chromosome | CDS | 2389380 | 444 | + | 0.56982 |
NA | CYB_0337 | integral membrane protein | SubName: Full=Integral membrane protein; | chromosome | CDS | 355765 | 930 | + | 0.612903 |
NA | CYB_0152 | transporter, major facilitator family | SubName: Full=Transporter, major facilitator family; | chromosome | CDS | 167037 | 1194 | - | 0.628978 |
NA | CYB_2162 | kinase, PfkB family | SubName: Full=Kinase, PfkB family; | chromosome | CDS | 2262301 | 900 | + | 0.63 |
NA | CYB_2213 | membrane protein, putative | SubName: Full=Membrane protein, putative; | chromosome | CDS | 2321459 | 969 | + | 0.621259 |
NA | CYB_2378 | NAD(+)/NADH kinase | RecName: Full=NAD kinase; EC=2.7.1.23; AltName: Full=ATP-dependent NAD kinase; | chromosome | CDS | 2483164 | 924 | + | 0.603896 |
NA | CYB_2199 | phosphofructokinase | SubName: Full=Phosphofructokinase; | chromosome | CDS | 2305535 | 1113 | + | 0.615454 |
NA | CYB_0514 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 527385 | 297 | + | 0.632997 |
NA | CYB_1891 | membrane protein, putative | SubName: Full=Membrane protein, putative; | chromosome | CDS | 1977427 | 513 | + | 0.598441 |
NA | CYB_2170 | inositol monophosphatase family protein | SubName: Full=Inositol monophosphatase family protein; | chromosome | CDS | 2273704 | 813 | - | 0.599016 |
NA | CYB_0528 | sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family | SubName: Full=Sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family; | chromosome | CDS | 542837 | 1389 | + | 0.588913 |
NA | CYB_2462 | inositol monophosphatase family protein | SubName: Full=Inositol monophosphatase family protein; | chromosome | CDS | 2559382 | 849 | + | 0.598351 |
NA | CYB_2338 | glycosyl hydrolase domain protein | SubName: Full=Glycosyl hydrolase domain protein; | chromosome | CDS | 2443451 | 1536 | + | 0.619141 |
NA | CYB_1488 | polysaccharide deacetylase family protein | SubName: Full=Polysaccharide deacetylase family protein; | chromosome | CDS | 1563522 | 873 | + | 0.610538 |
NA | CYB_1152 | transporter, folate-biopterin transporter (FBT) family | SubName: Full=Transporter, folate-biopterin transporter (FBT) family; | chromosome | CDS | 1192105 | 1428 | + | 0.608543 |
NA | CYB_0464 | phosphoglycerate mutase family protein | SubName: Full=Phosphoglycerate mutase family protein; | chromosome | CDS | 469147 | 639 | - | 0.597809 |
NA | CYB_1590 | carbohydrate uptake ABC transporter-1 (CUT1) family, ATP-binding protein | SubName: Full=Carbohydrate uptake ABC transporter-1 (CUT1) family, ATP-binding protein; | chromosome | CDS | 1661586 | 1122 | + | 0.622995 |
NA | CYB_0785 | glycogen debranching enzyme family protein | SubName: Full=Glycogen debranching enzyme family protein; | chromosome | CDS | 809623 | 2166 | - | 0.60711 |
NA | CYB_2518 | fructosamine kinase family protein | SubName: Full=Fructosamine kinase family protein; | chromosome | CDS | 2615878 | 924 | - | 0.588745 |
NA | CYB_2694 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2781228 | 696 | - | 0.58908 |
NA | CYB_1675 | lipoprotein, putative | SubName: Full=Lipoprotein, putative; | chromosome | CDS | 1751647 | 1212 | - | 0.609736 |
NA | CYB_2869 | cupin domain protein | SubName: Full=Cupin domain protein; | chromosome | CDS | 2967831 | 465 | - | 0.537634 |
NA | CYB_1007 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1047061 | 504 | - | 0.551587 |
NA | CYB_2893 | putative sn-glycerol-3-phosphate ABC transporter, permease protein | SubName: Full=Putative sn-glycerol-3-phosphate ABC transporter, permease protein; | chromosome | CDS | 2992182 | 789 | - | 0.580482 |
NA | CYB_2760 | transporter, putative bacteriochlorophyll delivery (BCD) family | SubName: Full=Transporter, putative bacteriochlorophyll delivery (BCD) family; | chromosome | CDS | 2858008 | 1461 | - | 0.594798 |
NA | CYB_1862 | inositol monophosphatase family protein | SubName: Full=Inositol monophosphatase family protein; | chromosome | CDS | 1944789 | 882 | - | 0.60771 |
NA | CYB_0797 | D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family protein | SubName: Full=D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family protein; | chromosome | CDS | 822309 | 2208 | + | 0.614583 |
NA | CYB_0465 | NAD(+)/NADH kinase | RecName: Full=NAD kinase; EC=2.7.1.23; AltName: Full=ATP-dependent NAD kinase; | chromosome | CDS | 469831 | 969 | - | 0.603715 |
NA | CYB_0428 | transporter, major facilitator family | SubName: Full=Transporter, major facilitator family; | chromosome | CDS | 436073 | 1230 | + | 0.587805 |
NA | CYB_0791 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 817510 | 366 | - | 0.606557 |
NA | CYB_0430 | tetratricopeptide repeat protein | SubName: Full=Tetratricopeptide repeat protein; | chromosome | CDS | 437528 | 2157 | - | 0.62216 |
NA | CYB_0515 | 3-beta hydroxysteroid dehydrogenase/isomerase family protein | SubName: Full=3-beta hydroxysteroid dehydrogenase/isomerase family protein; | chromosome | CDS | 527704 | 660 | - | 0.574242 |
NA | CYB_1607 | glycerate kinase | SubName: Full=Glycerate kinase; EC=2.7.1.31; | chromosome | CDS | 1678191 | 1140 | - | 0.668421 |
NA | CYB_0952 | transporter, major facilitator family | SubName: Full=Transporter, major facilitator family; | chromosome | CDS | 989823 | 1281 | - | 0.587041 |
NA | CYB_0816 | carbohydrate kinase, FGGY family | SubName: Full=Carbohydrate kinase, FGGY family; | chromosome | CDS | 844860 | 1386 | + | 0.606782 |
NA | CYB_0677 | trehalose synthase/putative maltokinase | SubName: Full=Trehalose synthase/putative maltokinase; EC=5.4.99.16; | chromosome | CDS | 689630 | 3438 | + | 0.600058 |
NA | CYB_1556 | NAD dependent epimerase/dehydratase family protein | RecName: Full=GDP-L-fucose synthase; EC=1.1.1.271; AltName: Full=GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase; | chromosome | CDS | 1628714 | 960 | + | 0.6125 |
ampG | CYB_1430 | peptide-acetyl-coenzyme A transporter (PAT) family protein AmpG | SubName: Full=Peptide-acetyl-coenzyme A transporter (PAT) family protein AmpG; | chromosome | CDS | 1499889 | 1347 | - | 0.582034 |
cbbL | CYB_2579 | ribulose bisphosphate carboxylase, large subunit | RecName: Full=Ribulose bisphosphate carboxylase large chain; Short=RuBisCO large subunit; EC=4.1.1.39; | chromosome | CDS | 2682338 | 1425 | - | 0.591579 |
eda | CYB_1899 | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase | SubName: Full=2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; EC=4.1.2.14; EC=4.1.3.16; | chromosome | CDS | 1985630 | 714 | + | 0.612045 |
eno | CYB_2531 | phosphopyruvate hydratase | RecName: Full=Enolase; EC=4.2.1.11; AltName: Full=2-phospho-D-glycerate hydro-lyase; AltName: Full=2-phosphoglycerate dehydratase; | chromosome | CDS | 2636162 | 1284 | - | 0.602025 |
fba | CYB_0357 | fructose-bisphosphate aldolase, class II, Calvin cycle subtype | SubName: Full=Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; EC=4.1.2.13; | chromosome | CDS | 372178 | 1080 | - | 0.592593 |
fbp | CYB_1986 | fructose-1,6-bisphosphatase | RecName: Full=Fructose-1,6-bisphosphatase class 1; Short=FBPase class 1; EC=3.1.3.11; AltName: Full=D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1; | chromosome | CDS | 2087652 | 999 | - | 0.600601 |
gap-1 | CYB_1429 | glyceraldehyde-3-phosphate dehydrogenase, type I | SubName: Full=Glyceraldehyde-3-phosphate dehydrogenase, type I; EC=1.2.1.-; | chromosome | CDS | 1498813 | 1017 | + | 0.616519 |
gap-2 | CYB_1704 | glyceraldehyde-3-phosphate dehydrogenase, type I | SubName: Full=Glyceraldehyde-3-phosphate dehydrogenase, type I; EC=1.2.1.-; | chromosome | CDS | 1788665 | 1020 | + | 0.586275 |
gap-3 | CYB_2306 | glyceraldehyde-3-phosphate dehydrogenase, type I | SubName: Full=Glyceraldehyde-3-phosphate dehydrogenase, type I; EC=1.2.1.-; | chromosome | CDS | 2417063 | 1011 | - | 0.597428 |
glgA-1 | CYB_0646 | glycogen/starch synthase, ADP-glucose type | RecName: Full=Glycogen synthase 1; EC=2.4.1.21; AltName: Full=Starch [bacterial glycogen] synthase 1; | chromosome | CDS | 656104 | 1476 | + | 0.541328 |
glgA-2 | CYB_1734 | glycogen/starch synthase, ADP-glucose type | RecName: Full=Glycogen synthase 2; EC=2.4.1.21; AltName: Full=Starch [bacterial glycogen] synthase 2; | chromosome | CDS | 1816003 | 1542 | - | 0.588846 |
glgB | CYB_1978 | 1,4-alpha-glucan branching enzyme | RecName: Full=1,4-alpha-glucan branching enzyme GlgB; EC=2.4.1.18; AltName: Full=1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; AltName: Full=Alpha-(1->4)-glucan branching enzyme; AltName: Full=Glycogen branching enzyme; Short=BE; | chromosome | CDS | 2076486 | 2292 | + | 0.565009 |
glgC | CYB_1067 | glucose-1-phosphate adenylyltransferase | RecName: Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27; | chromosome | CDS | 1104958 | 1287 | - | 0.57265 |
glgP | CYB_2688 | alpha-glucan phosphorylases | SubName: Full=Alpha-glucan phosphorylases; EC=2.4.1.1; | chromosome | CDS | 2772843 | 2601 | + | 0.595156 |
glk | CYB_0974 | glucokinase | SubName: Full=Glucokinase; EC=2.7.1.2; | chromosome | CDS | 1009689 | 1044 | + | 0.605364 |
glpX | CYB_2257 | fructose-1,6-bisphosphatase, class II | RecName: Full=D-fructose 1,6-bisphosphatase class 2/sedoheptulose 1,7-bisphosphatase; Short=FBPase class 2/SBPase; EC=3.1.3.11; EC=3.1.3.37; | chromosome | CDS | 2358884 | 1044 | + | 0.604406 |
gnd | CYB_2481 | 6-phosphogluconate dehydrogenase, decarboxylating | RecName: Full=6-phosphogluconate dehydrogenase, decarboxylating; EC=1.1.1.44; | chromosome | CDS | 2576049 | 1419 | + | 0.603946 |
gpmI | CYB_2684 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | RecName: Full=2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Short=BPG-independent PGAM; Short=Phosphoglyceromutase; Short=iPGM; EC=5.4.2.12; | chromosome | CDS | 2768336 | 1593 | - | 0.61833 |
ilvD | CYB_1987 | dihydroxy-acid dehydratase | RecName: Full=Dihydroxy-acid dehydratase; Short=DAD; EC=4.2.1.9; | chromosome | CDS | 2089024 | 1698 | + | 0.627797 |
malQ | CYB_1490 | 4-alpha-glucanotransferase | SubName: Full=4-alpha-glucanotransferase; EC=2.4.1.25; | chromosome | CDS | 1564556 | 1596 | + | 0.603383 |
opcA | CYB_2918 | opcA protein | SubName: Full=OpcA protein; | chromosome | CDS | 3016645 | 1140 | - | 0.602632 |
pgi | CYB_2919 | glucose-6-phosphate isomerase | RecName: Full=Glucose-6-phosphate isomerase; Short=GPI; EC=5.3.1.9; AltName: Full=Phosphoglucose isomerase; Short=PGI; AltName: Full=Phosphohexose isomerase; Short=PHI; | chromosome | CDS | 3017915 | 1599 | - | 0.627267 |
pgk | CYB_1693 | phosphoglycerate kinase | RecName: Full=Phosphoglycerate kinase; EC=2.7.2.3; | chromosome | CDS | 1769647 | 1239 | - | 0.619048 |
pgl | CYB_2885 | 6-phosphogluconolactonase | SubName: Full=6-phosphogluconolactonase; EC=3.1.1.31; | chromosome | CDS | 2984791 | 732 | + | 0.618852 |
ppsA | CYB_1115 | phosphoenolpyruvate synthase | RecName: Full=Phosphoenolpyruvate synthase; Short=PEP synthase; EC=2.7.9.2; AltName: Full=Pyruvate, water dikinase; | chromosome | CDS | 1151415 | 2466 | + | 0.622871 |
psaL-1 | CYB_1499 | photosystem I reaction center subunit XI | SubName: Full=Photosystem I reaction center subunit XI; | chromosome | CDS | 1574007 | 471 | + | 0.575372 |
psaL-2 | CYB_2826 | photosystem I reaction center subunit XI | SubName: Full=Photosystem I reaction center subunit XI; | chromosome | CDS | 2927710 | 480 | + | 0.585417 |
pyk | CYB_1545 | pyruvate kinase | RecName: Full=Pyruvate kinase; EC=2.7.1.40; | chromosome | CDS | 1620132 | 1860 | - | 0.598387 |
rbsK | CYB_1353 | ribokinase | SubName: Full=Ribokinase; EC=2.7.1.15; | chromosome | CDS | 1421431 | 918 | + | 0.615468 |
rpe | CYB_2047 | ribulose-phosphate 3-epimerase | RecName: Full=Ribulose-phosphate 3-epimerase; EC=5.1.3.1; | chromosome | CDS | 2148516 | 711 | - | 0.594937 |
rpiA | CYB_2038 | ribose 5-phosphate isomerase A | RecName: Full=Ribose-5-phosphate isomerase A; EC=5.3.1.6; AltName: Full=Phosphoriboisomerase A; | chromosome | CDS | 2139782 | 717 | + | 0.616457 |
tal | CYB_1112 | transaldolase | RecName: Full=Transaldolase; EC=2.2.1.2; | chromosome | CDS | 1148655 | 1179 | - | 0.575912 |
tkt | CYB_1119 | transketolase | RecName: Full=Transketolase; EC=2.2.1.1; | chromosome | CDS | 1156391 | 2001 | + | 0.613693 |
tpiA | CYB_2157 | triosephosphate isomerase | RecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1; AltName: Full=Triose-phosphate isomerase; | chromosome | CDS | 2256715 | 753 | + | 0.60425 |
treY | CYB_2158 | malto-oligosyltrehalose synthase | SubName: Full=Malto-oligosyltrehalose synthase; EC=5.4.99.15; | chromosome | CDS | 2257472 | 2802 | - | 0.506781 |
treZ | CYB_2529 | malto-oligosyltrehalose trehalohydrolase | RecName: Full=Malto-oligosyltrehalose trehalohydrolase; Short=MTHase; EC=3.2.1.141; AltName: Full=4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; AltName: Full=Maltooligosyl trehalose trehalohydrolase; | chromosome | CDS | 2632126 | 1824 | - | 0.60636 |
ugpB | CYB_2477 | glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate binding protein | SubName: Full=Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate binding protein; | chromosome | CDS | 2572676 | 1353 | + | 0.577975 |
upgA | CYB_2478 | glycerol-3-phosphate ABC transporter, permease protein | SubName: Full=Glycerol-3-phosphate ABC transporter, permease protein; | chromosome | CDS | 2574290 | 1053 | + | 0.573599 |
zwf | CYB_1985 | glucose-6-phosphate 1-dehydrogenase | RecName: Full=Glucose-6-phosphate 1-dehydrogenase; Short=G6PD; EC=1.1.1.49; | chromosome | CDS | 2086061 | 1554 | - | 0.620335 |