Gene list
Applied filters:
COG category: Transcription
Organism: Idiomarina loihiensis L2TR, L2TR
Number of genes found: 163
 | ||||||
| Hide UniProt / TrEMBL protein name | |
View in Fasta format (DNA) | |
View in Fasta format (Protein) | |
|
| ||||||
| Idiomarina loihiensis L2TR, L2TR | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | IL2204 | Serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; | chromosome | CDS | 2354926 | 1338 | + | 0.488042 |
| NA | IL0641 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 694889 | 975 | - | 0.427692 |
| NA | IL2419 | Transcriptional regulator, Cro/CI family | SubName: Full=Transcriptional regulator, Cro/CI family; | chromosome | CDS | 2592180 | 576 | + | 0.454861 |
| NA | IL2267 | Signaling protein (CHEY,EAL,GGDEF domains) | SubName: Full=Signaling protein (CHEY,EAL,GGDEF domains); | chromosome | CDS | 2424438 | 2214 | - | 0.443541 |
| NA | IL1227 | Uncharacterized conserved membrane protein | SubName: Full=Uncharacterized conserved membrane protein; | chromosome | CDS | 1320901 | 732 | - | 0.404372 |
| NA | IL2449 | Acetyltransferase, GNAT family fused to PaaI related uncharacterized conserved domain | SubName: Full=Acetyltransferase, GNAT family fused to PaaI related uncharacterized conserved domain; | chromosome | CDS | 2620162 | 903 | + | 0.504983 |
| NA | IL1611 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 1727013 | 852 | + | 0.448357 |
| NA | IL1391 | DNA-directed RNA polymerase specialized sigma subunit | SubName: Full=DNA-directed RNA polymerase specialized sigma subunit; | chromosome | CDS | 1494619 | 621 | + | 0.438003 |
| NA | IL0314 | Response regulator, LuxR family (CheY, HTH domains) | SubName: Full=Response regulator, LuxR family (CheY, HTH domains); | chromosome | CDS | 323304 | 597 | + | 0.460637 |
| NA | IL0923 | Response regulator containing a CheY-like receiver domain and an HD-GYP domain | SubName: Full=Response regulator containing a CheY-like receiver domain and an HD-GYP domain; | chromosome | CDS | 976133 | 1473 | - | 0.474542 |
| NA | IL0484 | Acetyltransferase, GNAT family | SubName: Full=Acetyltransferase, GNAT family; | chromosome | CDS | 509862 | 570 | - | 0.526316 |
| NA | IL0402 | Transcriptional regulator, TetR family | SubName: Full=Transcriptional regulator, TetR family; | chromosome | CDS | 419854 | 576 | + | 0.473958 |
| NA | IL0053 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 55214 | 897 | + | 0.487179 |
| NA | IL1428 | Transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 1538913 | 690 | - | 0.452174 |
| NA | IL0169 | Transcriptional regulator, ArsR family | SubName: Full=Transcriptional regulator, ArsR family; | chromosome | CDS | 180270 | 312 | - | 0.442308 |
| NA | IL0277 | Transcriptional regulator, TetR family | SubName: Full=Transcriptional regulator, TetR family; | chromosome | CDS | 292275 | 621 | - | 0.492754 |
| NA | IL2153 | Response regulator, LuxR family (CheY, HTH domains) | SubName: Full=Response regulator, LuxR family (CheY, HTH domains); | chromosome | CDS | 2291989 | 651 | - | 0.451613 |
| NA | IL0166 | Response regulator with a Fis-type DNA-binding domain (CheY, Fis domains) | SubName: Full=Response regulator with a Fis-type DNA-binding domain (CheY, Fis domains); | chromosome | CDS | 176538 | 522 | - | 0.480843 |
| NA | IL2084 | Predicted transcriptional regulator, HTH-type | SubName: Full=Predicted transcriptional regulator, HTH-type; | chromosome | CDS | 2216435 | 321 | - | 0.504673 |
| NA | IL1206 | Response regulator, LuxR family (CheY, HTH domains) | SubName: Full=Response regulator, LuxR family (CheY, HTH domains); | chromosome | CDS | 1294489 | 624 | - | 0.448718 |
| NA | IL1816 | Acetyltransferase, GNAT family | SubName: Full=Acetyltransferase, GNAT family; | chromosome | CDS | 1949119 | 450 | - | 0.455556 |
| NA | IL0060 | Membrane associated protein containing LuxR-like DNA-binding HTH domain | SubName: Full=Membrane associated protein containing LuxR-like DNA-binding HTH domain; | chromosome | CDS | 61796 | 510 | - | 0.456863 |
| NA | IL0155 | Response regulator, LuxR family (CheY-HTH) | SubName: Full=Response regulator, LuxR family (CheY-HTH); | chromosome | CDS | 164558 | 645 | + | 0.431008 |
| NA | IL0357 | Transcriptional regulator, MarR family | SubName: Full=Transcriptional regulator, MarR family; | chromosome | CDS | 373929 | 489 | + | 0.476483 |
| NA | IL0640 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 694516 | 204 | + | 0.45098 |
| NA | IL1607 | Predicted DNA-binding protein, possible transcriptional regulator | SubName: Full=Predicted DNA-binding protein, possible transcriptional regulator; | chromosome | CDS | 1723412 | 828 | + | 0.522947 |
| NA | IL0071 | Transcriptional regulator, TetR family | SubName: Full=Transcriptional regulator, TetR family; | chromosome | CDS | 74021 | 612 | + | 0.488562 |
| NA | IL2423 | DNA-directed RNA polymerase specialized sigma factor | SubName: Full=DNA-directed RNA polymerase specialized sigma factor; | chromosome | CDS | 2595386 | 1074 | + | 0.512104 |
| NA | IL0627 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 684630 | 873 | + | 0.457045 |
| NA | IL0606 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 656085 | 936 | - | 0.503205 |
| NA | IL0056 | Membrane associated protein containing xre-family DNA-binding HTH domain | SubName: Full=Membrane associated protein containing xre-family DNA-binding HTH domain; | chromosome | CDS | 58709 | 411 | - | 0.394161 |
| NA | IL1261 | Response regulator of the LytR/AlgR family | SubName: Full=Response regulator of the LytR/AlgR family; | chromosome | CDS | 1351227 | 819 | + | 0.438339 |
| NA | IL0592 | Transcriptional regulator, Cro/CI family | SubName: Full=Transcriptional regulator, Cro/CI family; | chromosome | CDS | 637685 | 282 | - | 0.460993 |
| NA | IL0527 | Transcriptional regulator, Cro/CI/xre family | SubName: Full=Transcriptional regulator, Cro/CI/xre family; | chromosome | CDS | 553919 | 270 | + | 0.448148 |
| NA | IL1603 | Predicted transcriptional regulator, rrf2 family | SubName: Full=Predicted transcriptional regulator, rrf2 family; | chromosome | CDS | 1719903 | 417 | + | 0.414868 |
| NA | IL2481 | Transcriptional regulator, Lpr family | SubName: Full=Transcriptional regulator, Lpr family; | chromosome | CDS | 2657241 | 444 | + | 0.466216 |
| NA | IL1744 | Predicted transcriptional regulator containing the HTH domain | SubName: Full=Predicted transcriptional regulator containing the HTH domain; | chromosome | CDS | 1877730 | 573 | - | 0.472949 |
| NA | IL0033 | Cold shock protein | SubName: Full=Cold shock protein; | chromosome | CDS | 36876 | 207 | - | 0.425121 |
| NA | IL1772 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 1906222 | 912 | - | 0.502193 |
| NA | IL2491 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 2670905 | 858 | + | 0.475524 |
| NA | IL2041 | Predicted transcriptional regulator, YjeB/RRF2 family | SubName: Full=Predicted transcriptional regulator, YjeB/RRF2 family; | chromosome | CDS | 2183508 | 480 | - | 0.49375 |
| NA | IL0918 | Transcriptional regulator, TetR family | SubName: Full=Transcriptional regulator, TetR family; | chromosome | CDS | 971350 | 627 | - | 0.435407 |
| NA | IL0054 | DNA-directed RNA polymerase specialized sigma subunit | SubName: Full=DNA-directed RNA polymerase specialized sigma subunit; | chromosome | CDS | 56928 | 543 | + | 0.418048 |
| NA | IL1164 | Predicted regulatory protein containing AraC-type DNA-binding domain and DSBH domain | SubName: Full=Predicted regulatory protein containing AraC-type DNA-binding domain and DSBH domain; | chromosome | CDS | 1243632 | 924 | + | 0.465368 |
| NA | IL2006 | Response regulator, LuxR family (CheY, HTH domains) | SubName: Full=Response regulator, LuxR family (CheY, HTH domains); | chromosome | CDS | 2146201 | 633 | - | 0.486572 |
| NA | IL0081 | Transcriptional regulator, MarR family | SubName: Full=Transcriptional regulator, MarR family; | chromosome | CDS | 87391 | 456 | - | 0.497807 |
| NA | IL2190 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 2340006 | 927 | - | 0.477886 |
| NA | IL1871 | Predicted transcriptional regulator | RecName: Full=Transcriptional repressor NrdR; | chromosome | CDS | 1999986 | 450 | - | 0.48 |
| NA | IL1815 | Acetyltransferase, GNAT family | SubName: Full=Acetyltransferase, GNAT family; | chromosome | CDS | 1948655 | 426 | - | 0.420188 |
| NA | IL1522 | Transcriptional regulator, MarR family | SubName: Full=Transcriptional regulator, MarR family; | chromosome | CDS | 1635322 | 480 | + | 0.46875 |
| NA | IL1936 | DNA-directed RNA polymerase specialized sigma subunit | SubName: Full=DNA-directed RNA polymerase specialized sigma subunit; | chromosome | CDS | 2062980 | 528 | - | 0.458333 |
| NA | IL1637 | Transcriptional regulator, MerR family | SubName: Full=Transcriptional regulator, MerR family; | chromosome | CDS | 1750806 | 420 | + | 0.364286 |
| NA | IL2218 | Transcription regulator | RecName: Full=UPF0301 protein IL2218; | chromosome | CDS | 2371878 | 558 | + | 0.521505 |
| NA | IL2297 | 4-Hydroxybutyrate CoA-transferase (N-terminal) fused to acetyltransferase (C-terminal) domain of GNAT superfamily | SubName: Full=4-Hydroxybutyrate CoA-transferase (N-terminal) fused to acetyltransferase (C-terminal) domain of GNAT superfamily; | chromosome | CDS | 2461190 | 1842 | + | 0.486428 |
| NA | IL0408 | Predicted transcriptional regulator, BolA superfamily | SubName: Full=Predicted transcriptional regulator, BolA superfamily; | chromosome | CDS | 423580 | 255 | + | 0.443137 |
| NA | IL1609 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 1725188 | 918 | + | 0.473856 |
| NA | IL0465 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 485780 | 879 | - | 0.510808 |
| NA | IL0303 | Transcriptional regulator, PaiB homolog | SubName: Full=Transcriptional regulator, PaiB homolog; | chromosome | CDS | 314454 | 627 | + | 0.460925 |
| NA | IL1491 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 1598576 | 1119 | + | 0.503128 |
| NA | IL0865 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 921834 | 900 | - | 0.478889 |
| NA | IL0296 | Response regulator of the LytR/AlgR family | SubName: Full=Response regulator of the LytR/AlgR family; | chromosome | CDS | 308386 | 723 | + | 0.484094 |
| NA | IL0571 | Uncharacterized conserved protein | SubName: Full=Uncharacterized conserved protein; | chromosome | CDS | 606573 | 636 | + | 0.40566 |
| NA | IL2384 | Transcriptional regulator, TetR family | SubName: Full=Transcriptional regulator, TetR family; | chromosome | CDS | 2555978 | 591 | - | 0.461929 |
| NA | IL2485 | Transcriptional regulator, AraC family | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 2661930 | 813 | + | 0.461255 |
| NA | IL1291 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 1387680 | 912 | - | 0.460526 |
| NA | IL2079 | Protein containing acetyltransferase (GNAT family) domain | SubName: Full=Protein containing acetyltransferase (GNAT family) domain; | chromosome | CDS | 2213458 | 744 | + | 0.486559 |
| NA | IL0302 | Transcriptional regulator, Cro/CI/xre family | SubName: Full=Transcriptional regulator, Cro/CI/xre family; | chromosome | CDS | 314131 | 303 | + | 0.412541 |
| NA | IL2193 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 2342638 | 996 | - | 0.466867 |
| NA | IL1208 | Response regulator containing a CheY-like receiver domain and an HD-GYP domain | SubName: Full=Response regulator containing a CheY-like receiver domain and an HD-GYP domain; | chromosome | CDS | 1296982 | 1563 | + | 0.472809 |
| NA | IL0628 | Transcription elongation factor greA/greB family | SubName: Full=Transcription elongation factor greA/greB family; | chromosome | CDS | 685670 | 456 | + | 0.423246 |
| NA | IL0008 | Acetyltransferase, GNAT family | SubName: Full=Acetyltransferase, GNAT family; | chromosome | CDS | 10174 | 492 | + | 0.45935 |
| NA | IL1648 | Response regulator (CheY, wHTH domains) | SubName: Full=Response regulator (CheY, wHTH domains); | chromosome | CDS | 1763285 | 666 | - | 0.438438 |
| NA | IL2095 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 2230072 | 843 | + | 0.512456 |
| NA | IL1254 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 1344234 | 846 | - | 0.457447 |
| NA | IL0853 | Predicted acetyltransferase, GNAT family | SubName: Full=Predicted acetyltransferase, GNAT family; | chromosome | CDS | 909525 | 681 | - | 0.465492 |
| NA | IL2601 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2797081 | 345 | + | 0.391304 |
| NA | IL0692 | Transcriptional regulator, TetR family | SubName: Full=Transcriptional regulator, TetR family; | chromosome | CDS | 746456 | 627 | - | 0.473684 |
| NA | IL2391 | Predicted transcriptional regulator, YjeB/RRF2 family | SubName: Full=Predicted transcriptional regulator, YjeB/RRF2 family; | chromosome | CDS | 2564106 | 453 | - | 0.445916 |
| NA | IL1601 | Transcriptional regulator, TetR family | SubName: Full=Transcriptional regulator, TetR family; | chromosome | CDS | 1718490 | 600 | + | 0.49 |
| NA | IL1290 | Transcriptional regulator, HTH motif containing | SubName: Full=Transcriptional regulator, HTH motif containing; | chromosome | CDS | 1386909 | 273 | - | 0.490842 |
| NA | IL1093 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 1177995 | 894 | + | 0.489933 |
| NA | IL1408 | NtrC family transcriptional regulator | SubName: Full=NtrC family transcriptional regulator; | chromosome | CDS | 1509939 | 1377 | - | 0.452433 |
| NA | IL0047 | Transcriptional regulator, DeoR family | SubName: Full=Transcriptional regulator, DeoR family; | chromosome | CDS | 50780 | 945 | + | 0.522751 |
| acrR | IL2441 | AcrAB operon repressor | SubName: Full=AcrAB operon repressor; | chromosome | CDS | 2615413 | 615 | + | 0.439024 |
| alpA | IL0639 | prophage CP4-57 regulatory protein-like protein | SubName: Full=Prophage CP4-57 regulatory protein-like protein; | chromosome | CDS | 694156 | 207 | + | 0.434783 |
| araC | IL0098 | AraC-type DNA-binding domain | SubName: Full=AraC-type DNA-binding domain; | chromosome | CDS | 101703 | 579 | - | 0.507772 |
| arcA | IL0491 | Response regulator (CheY,wHTH domains) | SubName: Full=Response regulator (CheY,wHTH domains); | chromosome | CDS | 516075 | 660 | - | 0.478788 |
| argR | IL0471 | Arginine repressor | RecName: Full=Arginine repressor; | chromosome | CDS | 496851 | 474 | - | 0.491561 |
| asnC | IL0694 | Probable regulator for asnA, asnC and gidA, lpr family | SubName: Full=Probable regulator for asnA, asnC and gidA, lpr family; | chromosome | CDS | 748234 | 471 | + | 0.437367 |
| bvg | IL2002 | Predicted transcriptional regulator | RecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; | chromosome | CDS | 2139966 | 789 | - | 0.485425 |
| cpxR | IL2434 | Response regulator (CheY,wHTH domains) | SubName: Full=Response regulator (CheY,wHTH domains); | chromosome | CDS | 2607351 | 681 | - | 0.475771 |
| cspD | IL0676 | Cold shock protein | SubName: Full=Cold shock protein; | chromosome | CDS | 731105 | 216 | + | 0.476852 |
| cspE | IL2493 | Cold shock protein | SubName: Full=Cold shock protein; | chromosome | CDS | 2672527 | 210 | - | 0.461905 |
| cysB | IL1709 | Probable positive transcriptional regulator for cysteine regulon | SubName: Full=Probable positive transcriptional regulator for cysteine regulon; | chromosome | CDS | 1840961 | 975 | - | 0.462564 |
| dbpA | IL1413 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 1516437 | 1425 | + | 0.45614 |
| dcm | IL2528 | DNA cytosine methylase | RecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; | chromosome | CDS | 2703805 | 1260 | + | 0.430159 |
| deaD | IL1991 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 2124009 | 1785 | - | 0.487955 |
| dinG | IL1832 | ATP-dependent DNA helicase | SubName: Full=ATP-dependent DNA helicase; | chromosome | CDS | 1964016 | 1953 | - | 0.509473 |
| fadR_1 | IL0306 | Transcriptional regulator, FadR family | SubName: Full=Transcriptional regulator, FadR family; | chromosome | CDS | 317046 | 732 | - | 0.478142 |
| fadR_2 | IL1821 | Negative regulator for fad regulon | RecName: Full=Fatty acid metabolism regulator protein; | chromosome | CDS | 1955418 | 711 | - | 0.523207 |
| farR | IL2452 | Transcriptional regulator of succinylCoA synthetase operon | SubName: Full=Transcriptional regulator of succinylCoA synthetase operon; | chromosome | CDS | 2624299 | 702 | - | 0.502849 |
| fecI | IL1594 | DNA-directed RNA polymerase specialized sigma subunit | SubName: Full=DNA-directed RNA polymerase specialized sigma subunit; | chromosome | CDS | 1708919 | 591 | - | 0.51269 |
| fis | IL2289 | Factor for inversion stimulation Fis, transcriptional activator | SubName: Full=Factor for inversion stimulation Fis, transcriptional activator; | chromosome | CDS | 2452212 | 294 | + | 0.462585 |
| flgM | IL1151 | Negative regulator of flagellin synthesis | SubName: Full=Negative regulator of flagellin synthesis; | chromosome | CDS | 1230915 | 324 | + | 0.459877 |
| fliA | IL1117 | DNA-directed RNA polymerase specialized sigma 28 subunit | RecName: Full=RNA polymerase sigma factor FliA; AltName: Full=RNA polymerase sigma factor for flagellar operon; AltName: Full=Sigma F; AltName: Full=Sigma-28; | chromosome | CDS | 1198046 | 726 | - | 0.46281 |
| glpR | IL2593 | Probable repressor of the glycerol-3-phosphate regulon | SubName: Full=Probable repressor of the glycerol-3-phosphate regulon; | chromosome | CDS | 2788077 | 705 | - | 0.451064 |
| greA | IL0979 | Transcription elongation factor GreA | RecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; | chromosome | CDS | 1033433 | 477 | - | 0.412998 |
| greB | IL0282 | GreB | RecName: Full=Transcription elongation factor GreB; AltName: Full=Transcript cleavage factor GreB; | chromosome | CDS | 297874 | 480 | - | 0.510417 |
| hepA | IL2223 | Probable ATP-dependent RNA helicase HepA | SubName: Full=Probable ATP-dependent RNA helicase HepA; | chromosome | CDS | 2375711 | 2661 | + | 0.517475 |
| hipB | IL0058 | Transcriptional regulator, HipB ortholog | SubName: Full=Transcriptional regulator, HipB ortholog; | chromosome | CDS | 59992 | 273 | + | 0.47619 |
| kdpE | IL1660 | Response regulator (CheY, wHTH domains) | SubName: Full=Response regulator (CheY, wHTH domains); | chromosome | CDS | 1776955 | 714 | + | 0.508403 |
| kdtA | IL1987 | 3-deoxy-D-manno-octulosonic-acid transferase | SubName: Full=3-deoxy-D-manno-octulosonic-acid transferase; | chromosome | CDS | 2119021 | 1986 | - | 0.474824 |
| lexA | IL0262 | SOS-response transcriptional repressor | RecName: Full=LexA repressor; EC=3.4.21.88; | chromosome | CDS | 275539 | 618 | - | 0.485437 |
| lrp | IL0668 | Lrp | SubName: Full=Lrp; | chromosome | CDS | 723670 | 492 | - | 0.463415 |
| merR | IL1643 | Transcriptional regulator MerR | SubName: Full=Transcriptional regulator MerR; | chromosome | CDS | 1758757 | 444 | - | 0.515766 |
| metJ | IL2465 | Transcriptional regulator of met regulon (repressor) | SubName: Full=Transcriptional regulator of met regulon (Repressor); | chromosome | CDS | 2640034 | 324 | - | 0.472222 |
| mfd | IL1520 | Transcription-repair coupling factor, superfamily II helicase | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 1630709 | 3483 | + | 0.492392 |
| narL | IL0182 | Nitrate/nitrite response regulator (CheY, HTH domain) | SubName: Full=Nitrate/nitrite response regulator (CheY, HTH domain); | chromosome | CDS | 195517 | 660 | - | 0.489394 |
| nhaR | IL0523 | Possible transcriptional activator of LysR family | SubName: Full=Possible transcriptional activator of LysR family; | chromosome | CDS | 549011 | 867 | - | 0.535179 |
| norR | IL0196 | Nitric oxide reductase regulator | SubName: Full=Nitric oxide reductase regulator; | chromosome | CDS | 212472 | 1545 | - | 0.516505 |
| nusA | IL0969 | Transcription elongation factor NusA | SubName: Full=Transcription elongation factor NusA; | chromosome | CDS | 1023927 | 1500 | - | 0.465333 |
| nusB | IL2141 | Transcription termination factor NusB | RecName: Full=N utilization substance protein B homolog; Short=Protein NusB; | chromosome | CDS | 2279186 | 420 | - | 0.471429 |
| nusG | IL0340 | Transcription antiterminator NusG | RecName: Full=Transcription termination/antitermination protein NusG; | chromosome | CDS | 350414 | 540 | + | 0.468519 |
| ompR | IL0320 | Response regulator (CheY, wHTH domains) | SubName: Full=Response regulator (CheY, wHTH domains); | chromosome | CDS | 329364 | 726 | + | 0.523416 |
| oxyR | IL2577 | Transcriptional regulator of lysR family | SubName: Full=Transcriptional regulator of lysR family; | chromosome | CDS | 2768451 | 915 | + | 0.49071 |
| parB | IL2627 | Chromosome partitioning protein ParB | SubName: Full=Chromosome partitioning protein ParB; | chromosome | CDS | 2827104 | 876 | - | 0.469178 |
| pdhR | IL0457 | Probable transcriptional regulator for pyruvate dehydrogenase complex | SubName: Full=Probable transcriptional regulator for pyruvate dehydrogenase complex; | chromosome | CDS | 471818 | 684 | + | 0.491228 |
| phoB | IL2111 | Positive response regulator for pho regulon (CheY-wHTH) | SubName: Full=Positive response regulator for pho regulon (CheY-wHTH); | chromosome | CDS | 2248260 | 687 | - | 0.480349 |
| pspA | IL0731 | Phage shock protein A | SubName: Full=Phage shock protein A; | chromosome | CDS | 788222 | 675 | - | 0.451852 |
| pspC | IL0729 | Putative stress-responsive transcriptional regulator | SubName: Full=Putative stress-responsive transcriptional regulator; | chromosome | CDS | 787584 | 384 | - | 0.440104 |
| pspF | IL0732 | Transcriptional regulator, AtoC family (AAA,HTH domains) | SubName: Full=Transcriptional regulator, AtoC family (AAA,HTH domains); | chromosome | CDS | 789087 | 1077 | + | 0.457753 |
| qseB_1 | IL0095 | Response regulator (CheY,wHTH domains) | SubName: Full=Response regulator (CheY,wHTH domains); | chromosome | CDS | 99109 | 663 | + | 0.509804 |
| recG | IL2374 | DNA helicase RecJ | SubName: Full=DNA helicase RecJ; | chromosome | CDS | 2544023 | 2082 | - | 0.532661 |
| relA | IL0804 | (p)ppGpp synthetase II | SubName: Full=(P)ppGpp synthetase II; | chromosome | CDS | 860857 | 2190 | - | 0.519178 |
| rfaH | IL0590 | Transcription antiterminator RfaH | SubName: Full=Transcription antiterminator RfaH; | chromosome | CDS | 632681 | 498 | - | 0.475904 |
| rhaR | IL2484 | Positive regulator for rhaRS operon, AraC family | SubName: Full=Positive regulator for rhaRS operon, AraC family; | chromosome | CDS | 2660674 | 1032 | - | 0.459302 |
| rhlB | IL2363 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 2533858 | 1278 | + | 0.5 |
| rhlE | IL1546 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 1664644 | 1251 | + | 0.478018 |
| rho | IL2361 | Transcription termination factor rho | RecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; | chromosome | CDS | 2531922 | 1269 | - | 0.481481 |
| rnc | IL0810 | Rnase III, dsRNA-specific ribonuclease | RecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; | chromosome | CDS | 867199 | 690 | - | 0.484058 |
| rnk | IL0629 | Transcription elongation factor family protein | SubName: Full=Transcription elongation factor family protein; | chromosome | CDS | 686333 | 390 | + | 0.428205 |
| rpoA | IL1891 | DNA-directed RNA polymerase alpha subunit | RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; | chromosome | CDS | 2030875 | 990 | - | 0.482828 |
| rpoB | IL0345 | DNA-directed RNA polymerase beta subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 353652 | 4029 | + | 0.469347 |
| rpoC | IL0346 | DNA-directed RNA polymerase beta' subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 357753 | 4236 | + | 0.465061 |
| rpoD | IL2200 | DNA-directed RNA polymerase sigma 70 subunit | RecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; | chromosome | CDS | 2349877 | 1830 | - | 0.466667 |
| rpoE | IL0816 | DNA-directed RNA polymerase specialized sigma E subunit | SubName: Full=DNA-directed RNA polymerase specialized sigma E subunit; | chromosome | CDS | 872743 | 579 | - | 0.462867 |
| rpoH | IL0229 | DNA-directed RNA polymerase sigma 32 subunit | RecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; | chromosome | CDS | 247956 | 861 | + | 0.472706 |
| rpoN | IL0396 | DNA-directed RNA polymerase specialized sigma 54/60 subunit | RecName: Full=RNA polymerase sigma-54 factor; | chromosome | CDS | 414886 | 1461 | - | 0.473648 |
| rpoS | IL0745 | DNA-directed RNA polymerase sigma 38 subunit | RecName: Full=RNA polymerase sigma factor RpoS; AltName: Full=Sigma S; AltName: Full=Sigma-38; | chromosome | CDS | 805779 | 969 | - | 0.480908 |
| rpoZ | IL2381 | DNA-directed RNA polymerase omega subunit | RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; | chromosome | CDS | 2553700 | 270 | - | 0.455556 |
| rsd | IL2308 | Regulator of sigma D | SubName: Full=Regulator of sigma D; | chromosome | CDS | 2475100 | 477 | + | 0.427673 |
| sIR2 | IL1566 | SIR2-like regulatory protein, NAD-dependent protein deacetylase | SubName: Full=SIR2-like regulatory protein, NAD-dependent protein deacetylase; | chromosome | CDS | 1678955 | 777 | + | 0.530245 |
| soxR_1 | IL0631 | Transcriptional regulator, MerR family | SubName: Full=Transcriptional regulator, MerR family; | chromosome | CDS | 688506 | 408 | - | 0.553922 |
| soxR_2 | IL0801 | Transcriptional regulator, MerR family | SubName: Full=Transcriptional regulator, MerR family; | chromosome | CDS | 859045 | 396 | - | 0.482323 |
| soxR_3 | IL0873 | Transcriptional regulator, MerR family | SubName: Full=Transcriptional regulator, MerR family; | chromosome | CDS | 930556 | 420 | + | 0.464286 |
| soxR_4 | IL1243 | Transcriptional regulator, MerR family | SubName: Full=Transcriptional regulator, MerR family; | chromosome | CDS | 1335433 | 408 | + | 0.553922 |
| spoT | IL2380 | (p)ppGpp synthetase I | SubName: Full=(P)ppGpp synthetase I; | chromosome | CDS | 2551492 | 2106 | - | 0.491928 |
| srmB | IL2131 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; | chromosome | CDS | 2269668 | 1230 | + | 0.495935 |
| tex | IL0281 | Transcriptional accessory protein | SubName: Full=Transcriptional accessory protein; | chromosome | CDS | 295480 | 2331 | - | 0.521236 |
| ttk | IL0237 | Transcriptional regulator, TetR family | RecName: Full=Nucleoid occlusion factor SlmA; | chromosome | CDS | 254646 | 591 | - | 0.472081 |
| tyrR | IL0723 | Transcriptional regulator of aromatic amino acids metabolism | SubName: Full=Transcriptional regulator of aromatic amino acids metabolism; | chromosome | CDS | 780973 | 1581 | - | 0.480708 |
| uvrY | IL0654 | Response regulator, LuxR family (CheY, HTH domains) | SubName: Full=Response regulator, LuxR family (CheY, HTH domains); | chromosome | CDS | 711878 | 651 | - | 0.466974 |
| vacB | IL1943 | Exoribonuclease R | RecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; | chromosome | CDS | 2066352 | 2310 | - | 0.463636 |
|
Beutenbergstraße 11 D-07745 Jena • Germany |
Phone: +49 3641 65-6000 Fax: +49 3641 65-6351 |
E-mail: info@leibniz-fli.de www.leibniz-fli.de |
Data Privacy Imprint |
|