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2026-03-11 06:15:29

Gene list

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COG category: Amino acid transport and metabolism
Organism: Phage Gifsy-1

Number of genes found: 434

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Phage Gifsy-1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SC2083 histidinol phosphate aminotransferasechromosome CDS2173221 1080 + 0.559259
NA SC1628 putative periplasmic binding proteinchromosome CDS1737050 231 + 0.419913
NA SC4345 replication proteinchromosome CDS4648993 372 - 0.325269
NA SC2360 putative cytoplasmic proteinchromosome CDS2483058 1104 - 0.509058
NA SC3719 integral membrane proteinchromosome CDS3938281 861 + 0.585366
NA SC2283 putative permeasechromosome CDS2399466 1287 - 0.493396
NA SC2843 putative permeasechromosome CDS3009168 1497 - 0.589846
NA SC3066 putative amino acid transporterchromosome CDS3244900 1500 - 0.516
NA SC3931 putative branched-chain amino acid permeasechromosome CDS4185141 660 - 0.575758
NA SC2225 putative inner membrane proteinchromosome CDS2333017 471 - 0.373673
NA SC0594 hypothetical proteinchromosome CDS662279 1587 + 0.322621
NA SC1631 putative ABC-type transport system probable membrane spanning proteinchromosome CDS1739217 681 + 0.433187
NA SC3555 cystathionine gamma-synthasechromosome CDS3759468 141 + 0.482269
NA SC1279 putative chorismate mutasechromosome CDS1381482 546 + 0.470696
NA SC2361 putative amino acid transporterchromosome CDS2484163 1422 - 0.504219
NA SC0500 putative cysteine synthase/cystathionine beta-synthasechromosome CDS559458 1056 - 0.545455
NA SC2488 putative permeasechromosome CDS2621192 1269 - 0.563436
NA SC4099 aspartokinase III, lysine sensitivechromosome CDS4373084 1350 - 0.567407
NA SC4298 putative inner membrane proteinchromosome CDS4599477 777 + 0.567568
NA SC3528 alpha-ketoglutarate permeasechromosome CDS3725264 165 - 0.387879
NA SC1271 putative ATPase component of ABC-type transport system, contain duplicated ATPase domainchromosome CDS1374942 591 + 0.568528
adi SC4321 putative arginine deiminasechromosome CDS4623278 1224 - 0.526961
adi SC4175 arginine decarboxylase, catabolic; inducible by acidchromosome CDS4473231 2271 - 0.537208
aegA SC2475 putative oxidoreductasechromosome CDS2603499 1968 - 0.581809
agl SC3057 putative lactoylglutathione lyasechromosome CDS3235867 435 - 0.37931
allC SC0566 allantoate amidohydrolasechromosome CDS633088 1236 - 0.538026
ampG SC0486 MFS family, muropeptide transporterchromosome CDS542956 1482 - 0.568826
ansA SC1316 cytoplasmic L-asparaginase Ichromosome CDS1412784 1089 - 0.525253
ansB SC3046 periplasmic L-asparaginase IIchromosome CDS3224973 1047 - 0.52531
ansP SC1582 APC family, L-asparagine transport proteinchromosome CDS1683802 1494 + 0.534137
araE SC2955 MFS family, L-arabinose: proton symport protein (low-affinity transporter)chromosome CDS3135494 1419 - 0.526427
arcC SC4320 putative carbamate kinasechromosome CDS4622335 933 - 0.599143
arcC SC0571 putative carbamate kinasechromosome CDS639468 894 + 0.579418
argA SC2930 N-alpha-acetylglutamate synthase (amino-acid acetyltransferase)chromosome CDS3102535 1332 + 0.528529
argB SC4012 acetylglutamate kinasechromosome CDS4274895 774 + 0.578811
argC SC4011 N-acetyl-gamma-glutamylphosphate reductasechromosome CDS4273880 1005 + 0.536318
argD SC3402 acetylornithine transaminase (NAcOATase and DapATase)chromosome CDS3572895 1218 - 0.555829
argE SC4010 acetylornithine deacetylasechromosome CDS4272640 1152 - 0.53559
argG SC3231 argininosuccinate synthetasechromosome CDS3414884 1410 + 0.528369
argH SC4013 argininosuccinate lyasechromosome CDS4275786 1377 + 0.569354
argI SC4324 ornithine carbamoyltransferase 1chromosome CDS4625700 1005 - 0.519403
argT SC2356 ABC superfamily (bind_prot), lysine/arginine/ornithine transport proteinchromosome CDS2479922 783 - 0.509579
aroA SC0932 3-enolpyruvylshikimate-5-phosphate synthetasechromosome CDS1046582 1284 + 0.538941
aroB SC3418 dehydroquinate synthasechromosome CDS3594572 1089 - 0.557392
aroC SC2386 chorismate synthasechromosome CDS2508951 1086 - 0.585635
aroD SC1377 3-dehydroquinate dehydratasechromosome CDS1475725 759 - 0.513834
aroE SC3337 dehydroshikimate reductasechromosome CDS3527708 819 - 0.503053
aroF SC2672 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase), tyrosine repressiblechromosome CDS2828712 1071 - 0.530345
aroG SC0759 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible)chromosome CDS852288 1182 + 0.51692
aroH SC1366 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase), tryptophan repressiblechromosome CDS1461505 1047 - 0.530086
aroK SC3419 shikimate kinase Ichromosome CDS3595717 522 - 0.503831
aroL SC0429 shikimate kinase IIchromosome CDS485339 546 + 0.580586
aroP SC0149 APC family, aromatic amino acid transporterchromosome CDS169438 1374 - 0.555313
artI SC0882 ABC superfamily (bind_prot), arginine transport systemchromosome CDS988039 801 - 0.510612
artJ SC0879 ABC superfamily (bind_prot), arginine 3rd transport systemchromosome CDS985681 732 - 0.486339
artJ SC4230 putative arginine-binding periplasmic proteinchromosome CDS4530104 720 - 0.495833
artM SC0880 ABC superfamily (membrane), arginine 3rd transport systemchromosome CDS986648 669 - 0.518685
artP SC0883 ABC superfamily (atp&memb), arginine transport systemchromosome CDS988788 729 - 0.536351
artQ SC0881 ABC superfamily (membrane), arginine 3rd transport systemchromosome CDS987316 717 - 0.550907
asd SC3469 aspartate-semialdehyde dehydrogenasechromosome CDS3661932 1107 - 0.566396
asnA SC3790 asparagine synthetase Achromosome CDS4020363 993 + 0.564955
asnB SC0701 asparagine synthetase Bchromosome CDS780825 1665 - 0.545345
aspA SC4204 aspartate ammonia-lyase (aspartase)chromosome CDS4505646 1437 - 0.507307
aspC SC0955 aspartate aminotransferasechromosome CDS1073676 1191 - 0.551637
aspG SC3532 putative L-asparaginasechromosome CDS3728555 1044 - 0.510536
astA SC1327 arginine succinyltransferasechromosome CDS1424397 1527 + 0.542895
astC SC1326 succinylornithine transaminase, also has acetylornitine transaminase activitychromosome CDS1423180 1227 + 0.558272
astE SC1328 succinylglutamate desuccinylasechromosome CDS1425916 969 + 0.583075
bcr SC2238 MFS family multidrug transport protein, bicyclomycin resistance proteinchromosome CDS2346333 1191 - 0.541562
brnQ SC0441 LIVCS family, branched chain amino acid transporter system II (LIV-II)chromosome CDS497750 1320 + 0.568182
cadA SC2554 lysine decarboxylase 1chromosome CDS2720557 2145 + 0.492774
cadB SC2553 APC family, lysine/cadaverine transport proteinchromosome CDS2719143 1332 + 0.536036
carA SC0060 carbamoyl-phosphate synthetase, glutamine-hydrolysing small subunitchromosome CDS69959 1149 + 0.563969
carB SC0061 carbamoyl-phosphate synthase, large subunitchromosome CDS71126 3228 + 0.589529
citA SC0710 citrate-proton symporterchromosome CDS793263 1305 - 0.540996
cobD SC0674 putative aminotransferase in cobalamin synthesischromosome CDS748324 1095 + 0.564384
csbX SC3527 Alpha-ketoglutarate permeasechromosome CDS3724176 1116 - 0.459677
csdA SC2924 putative selenocysteine lyasechromosome CDS3095649 1206 + 0.599503
cycA SC4272 APC family, D-alanine/D-serine/glycine transport proteinchromosome CDS4569540 1404 + 0.5349
cysD SC2867 ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase)chromosome CDS3029313 909 - 0.530253
cysE SC3622 serine acetyltransferasechromosome CDS3836621 822 - 0.557178
cysH SC2877 3'-phosphoadenosine 5'-phosphosulfate (PAPS) reductasechromosome CDS3041837 735 - 0.556463
cysK SC2428 subunit of cysteine synthase A and O-acetylserine sulfhydrolase Achromosome CDS2558981 972 + 0.538066
cysM SC2439 cysteine synthase B (O-acetylserine sulfhydrolase B)chromosome CDS2567402 1068 - 0.559925
cysZ SC2427 required for sulfate transportchromosome CDS2557908 762 + 0.530184
dadA SC1796 D-amino acid dehydrogenase subunitchromosome CDS1917862 1299 - 0.562741
dapA SC2484 dihydrodipicolinate synthasechromosome CDS2617933 879 - 0.535836
dapB SC0058 dihydrodipicolinate reductasechromosome CDS68273 822 + 0.565693
dapD SC0213 2,3,4,5-tetrahydropyridine-2-carboxylateN-succin yltransferasechromosome CDS245402 825 - 0.538182
dapE SC2478 N-succinyl-diaminopimelate deacylasechromosome CDS2611584 1128 + 0.542553
dapF SC3846 diaminopimelate epimerasechromosome CDS4086497 828 + 0.561594
dcdA SC2362 putative diaminopimelate decarboxylasechromosome CDS2485675 1398 - 0.499285
dcp SC1529 dipeptidyl carboxypeptidase IIchromosome CDS1627845 2043 + 0.536955
dgoT SC3744 MFS family, D-galactonate transport proteinchromosome CDS3968220 1338 - 0.538117
dpaL SC0959 putatiave diaminopropionate ammonia lyasechromosome CDS1079231 1101 + 0.465032
dppA SC3561 ABC superfamily (peri_perm), dipeptide transport proteinchromosome CDS3765217 1608 - 0.520522
dppB SC3560 ABC superfamily (membrane), dipeptide transport protein 1chromosome CDS3764041 1020 - 0.563725
dppC SC3559 ABC superfamily (membrane), dipeptide transport protein 2chromosome CDS3763129 903 - 0.600221
dppD SC3558 ABC superfamily (atp_bind), dipeptide transport proteinchromosome CDS3762135 984 - 0.556911
dppF SC3557 ABC superfamily (atp_bind), dipeptide transport proteinchromosome CDS3761125 1014 - 0.572978
dsdA SC3724 D-serine deaminase (dehydratase)chromosome CDS3944108 1323 + 0.568405
dsdX SC3723 putative Gnt family transport proteinchromosome CDS3942753 1338 + 0.563528
edd SC1890 6-phosphogluconate dehydratasechromosome CDS1998880 1311 - 0.559115
emrB SC2749 putative MFS superfamily, multidrug transport proteinchromosome CDS2917651 1539 + 0.569851
emrD SC3720 MFS family, multidrug tranport proteinchromosome CDS3939344 1185 + 0.579747
eutB SC2455 ethanolamine ammonia-lyase, heavy chainchromosome CDS2581853 1362 - 0.569016
eutH SC2456 putative transport protein, ethanolamine utilizationchromosome CDS2584626 1227 - 0.569682
eutJ SC2458 paral putative heatshock protein (Hsp70)chromosome CDS2587149 840 - 0.614286
eutL SC2454 putative carboxysome structural protein, ethanolamine utilizationchromosome CDS2580270 660 - 0.590909
eutP SC2465 putative ethanolamine utilization proteinchromosome CDS2592619 489 - 0.521472
eutQ SC2464 putative ethanolamine utilization proteinchromosome CDS2591952 690 - 0.573913
eutS SC2466 putative carboxysome structural protein, ethanol utilizationchromosome CDS2593111 336 - 0.508929
eutT SC2463 putative cobalamin adenosyltransferase, ethanolamine utilizationchromosome CDS2591158 798 - 0.591479
exuT SC3075 putative permeasechromosome CDS3253889 1305 - 0.524138
fliY SC1958 putative periplasmic binding transport proteinchromosome CDS2065655 759 - 0.516469
fsr SC0535 putative MFS family of transport proteinchromosome CDS596599 1221 - 0.553645
gabP SC2725 APC family, gamma-aminobutyrate transport protein, RpoS dependentchromosome CDS2897693 1401 + 0.515346
gabT SC2724 4-aminobutyrate aminotransferasechromosome CDS2896280 1284 + 0.577103
gadD SC3202 galactitol-1-phosphate dehydrogenasechromosome CDS3386342 1044 + 0.55364
galP SC3031 MFS family, galactose:proton symporterchromosome CDS3212829 1395 + 0.551971
gcvH SC2995 glycine cleavage complex protein H, carrier of aminomethyl moiety via covalently bound lipoyl cofactorchromosome CDS3173344 390 - 0.548718
gcvP SC2994 glycine cleavage complex protein P, glycine decarboxylasechromosome CDS3170308 2985 - 0.565494
gcvR SC2485 transcriptional repressor of gcv operonchromosome CDS2618856 675 + 0.481481
gcvT SC2996 glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependentchromosome CDS3173759 1095 - 0.556164
gdh SC1788 putative Homolog of glutamic dehyrogenasechromosome CDS1908703 1326 + 0.558069
gdhA SC1321 glutamate dehydrogenase, NADP-specificchromosome CDS1419622 1344 - 0.578869
ggt SC3480 gamma-glutamyltranspeptidasechromosome CDS3673764 1743 - 0.55938
glnA SC3899 glutamine synthetasechromosome CDS4149675 1410 - 0.558865
glnB SC2556 Nitrogen regulatory protein P-II 1chromosome CDS2724266 339 - 0.498525
glnH SC0825 ABC superfamily (bind_prot), glutamine high-affinity transporterchromosome CDS924857 747 - 0.484605
glnK SC0505 regulatory protein, P-II 2, for nitrogen assimilation by glutamine synthetase, regulates GlnL (NRII) and GlnE (ATase)chromosome CDS564883 339 + 0.528024
glnP SC0824 ABC superfamily (membrane), glutamine high-affinity transporterchromosome CDS924054 660 - 0.527273
glnQ SC0823 ABC superfamily (atp_bind), glutamine high-affinity transporterchromosome CDS923335 723 - 0.522822
gloA SC1454 glyoxalase I, nickel isomerasechromosome CDS1550139 408 - 0.519608
glpB SC2288 sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunitchromosome CDS2406135 1260 + 0.595238
gltB SC3268 glutamate synthase, large subunitchromosome CDS3449265 4461 + 0.583277
gltD SC3269 glutamate synthase, small subunitchromosome CDS3453735 1419 + 0.562368
gltI SC0693 ABC superfamily (bind_prot), glutamate/aspartate transporterchromosome CDS771443 927 - 0.514563
gltJ SC0692 ABC superfamily (membrane), glutamate/aspartate transporterchromosome CDS770544 741 - 0.541161
gltK SC0691 ABC superfamily (membrane), glutamate/aspartate transporterchromosome CDS769870 675 - 0.539259
gltL SC0690 ABC superfamily (atp_bind), glutamate/aspartate transporterchromosome CDS769145 726 - 0.524793
gltL SC1630 putative ABC-type polar amino acid transport system, ATPase componentchromosome CDS1738489 732 + 0.439891
gltS SC3670 GltS family, glutamate transport proteinchromosome CDS3882119 1206 - 0.565506
glyA SC2549 serine hydroxymethyltransferasechromosome CDS2714288 1254 - 0.566188
gntT SC3444 GntP family, high-affinity gluconate permease in GNT I systemchromosome CDS3623912 1317 + 0.558087
gntU SC3471 low affinity gluconate permeasechromosome CDS3663462 1341 - 0.57569
gsp SC3080 glutathionylspermidine synthetase; glutathionylspermidine amidasechromosome CDS3261814 1857 - 0.53581
gudP SC4287 putative pemeasechromosome CDS4589482 1209 - 0.471464
gudP SC3750 putative permeasechromosome CDS3974347 1263 + 0.475059
gudT SC2901 putative MFS superfamily, D-glucarate permeasechromosome CDS3072944 1359 - 0.520971
hcaT SC2548 putative MFS family transport proteinchromosome CDS2712953 1140 - 0.579825
hisA SC2086 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'- phosphoribosyl)-4-imidazolecarboxamide isomerasechromosome CDS2175954 738 + 0.584011
hisB SC2084 imidazoleglycerol-phosphatedehydratase/histidino l-phosphatasechromosome CDS2174297 1068 + 0.520599
hisD SC2082 histidinal dehydrogenase (also histidinol dehydrogenase activity)chromosome CDS2171920 1305 + 0.582375
hisF SC2087 imidazole glycerol phosphate synthase, subunit with HisHchromosome CDS2176673 777 + 0.552124
hisG SC2081 ATP phosphoribosyltransferasechromosome CDS2170918 900 + 0.558889
hisH SC2085 glutamine amidotransferase, subunit with HisFchromosome CDS2175361 594 + 0.56734
hisI SC2088 phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphatasechromosome CDS2177443 612 + 0.529412
hisJ SC2355 ABC superfamily (bind_prot), histidine transport proteinchromosome CDS2478902 783 - 0.517241
hisM SC2353 ABC superfamily (membrane),histidine and lysine/arginine/ornithine transport proteinchromosome CDS2477329 708 - 0.516949
hisP SC2352 ABC superfamily (atp_bind), histidine and lysine/arginine/ornithine transport proteinchromosome CDS2476542 777 - 0.526384
hisQ SC2354 ABC superfamily (membrane),histidine and lysine/arginine/ornithine transport systemchromosome CDS2478033 687 - 0.547307
hpaF SC1054 4-hydroxyphenylacetate catabolismchromosome CDS1171260 381 + 0.538058
hpaX SC1057 4-hydroxyphenylacetate catabolismchromosome CDS1173450 1377 + 0.528686
hutC SC0788 histidine utilization repressorchromosome CDS883596 1686 + 0.59312
hutG SC0786 formimionoglutamate hydrolasechromosome CDS881688 942 + 0.609342
hutH SC0789 histidine ammonia lyasechromosome CDS885283 1521 + 0.602235
idnD SC4340 L-idonate 5-dehydrogenasechromosome CDS4641939 1032 - 0.500969
idnT SC4338 GntP family, L-idonate transport proteinchromosome CDS4639769 1434 - 0.525105
ilvA SC3810 threonine deaminasechromosome CDS4048969 1545 + 0.572168
ilvB SC3716 acetolactate synthase I, large subunit, valine sensitivechromosome CDS3935572 1689 - 0.560687
ilvC SC3814 ketol-acid reductoisomerasechromosome CDS4052506 1476 + 0.565041
ilvD SC3809 dihydroxyacid dehydratasechromosome CDS4047116 1851 + 0.575905
ilvE SC3808 branched-chain amino-acid aminotransferasechromosome CDS4046027 930 + 0.547312
ilvH SC0114 acetolactate synthase III, small subunitchromosome CDS131891 495 + 0.533333
ilvI SC0113 acetolactate synthase III, valine sensitive, large subunitchromosome CDS130191 1701 + 0.545561
ilvN SC3715 acetolactate synthase I, small subunitchromosome CDS3935278 291 - 0.501718
jen SC0397 putative inner membrane proteinchromosome CDS446430 1254 + 0.542265
kdgT SC0161 2-keto-3-deoxygluconate permeasechromosome CDS186310 954 + 0.57652
kgtP SC2659 MFS family, alpha-ketoglutarate permeasechromosome CDS2811598 1302 - 0.519969
ldcC SC0234 lysine decarboxylase 2, constitutivechromosome CDS272016 2142 + 0.520075
ledL SC0374 putative 3-isopropylmalate isomerase (dehydratase), subunit with LeuDchromosome CDS417311 1422 + 0.512658
ledS SC0375 putative 3-isopropylmalate isomerase (dehydratase), subunit with LeuCchromosome CDS418734 627 + 0.518341
leuA SC0109 2-isopropylmalate synthasechromosome CDS126499 1572 - 0.549618
leuB SC0108 3-isopropylmalate dehydrogenasechromosome CDS125408 1092 - 0.557692
leuC SC0107 3-isopropylmalate isomerase (dehydratase), subunit with LeuDchromosome CDS124005 1401 - 0.588151
leuD SC0106 3-isopropylmalate isomerase (dehydratase), subunit with LeuCchromosome CDS123389 606 - 0.539604
livF SC3489 ABC superfamily (atp_bind), branched-chain amino acid transporter, high-affinitychromosome CDS3681997 714 - 0.59944
livG SC3490 ABC superfamily (atp_bind), branched-chain amino acid transporter, high-affinitychromosome CDS3682712 768 - 0.572917
livH SC3492 ABC superfamily (membrane), branched-chain amino acid transporter, high-affinitychromosome CDS3684750 927 - 0.558792
livJ SC3496 Leu/Ile/Val/Thr-binding protein precursorchromosome CDS3688616 1161 - 0.548665
livM SC3491 ABC superfamily (membrane), branched-chain amino acid transporter, high-affinitychromosome CDS3683476 1278 - 0.577465
lrp SC0961 putative transcriptional regulator, Lrp familychromosome CDS1080595 1437 + 0.430063
ltaA SC0889 L-allo-threonine aldolasechromosome CDS994089 1002 - 0.595808
lysA SC2952 diaminopimelate decarboxylasechromosome CDS3132387 1263 - 0.571655
lysE SC4380 transporter, LysE familychromosome CDS4687148 642 - 0.563863
lysP SC2216 APC family, lysine-specific permeasechromosome CDS2321403 1470 - 0.531973
malY SC1481 MalY protein [Includes: Cystathionine beta-lyasechromosome CDS1576305 396 - 0.575758
mbhS SC1556 putative hydrogenase-1 small subunitchromosome CDS1650950 330 - 0.515152
mdfA SC0860 multidrug translocasechromosome CDS966242 1233 + 0.545012
mdoC SC1096 membrane protein required for succinyl substitution of glucan backbone of OPG (osmoregulated periplasmic glucan)chromosome CDS1215045 1155 - 0.464935
metA SC4061 homoserine transsuccinylasechromosome CDS4334190 930 + 0.494624
metB SC3991 cystathionine gamma-synthasechromosome CDS4244089 1161 + 0.561585
metC SC3105 cystathionine beta-lyase (beta-cystathionase)chromosome CDS3281615 1329 + 0.524454
metE SC3864 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferasechromosome CDS4104004 2265 + 0.573068
metF SC3997 5,10-methylenetetrahydrofolate reductasechromosome CDS4252902 891 + 0.52862
metH SC4067 B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of metE and metFchromosome CDS4341607 3771 + 0.577831
metJ SC3990 transcriptional repressor of all met genes but metF (MetJ family)chromosome CDS4243507 318 - 0.518868
metL SC3992 aspartokinase IIchromosome CDS4245252 2433 + 0.591451
mlr SC4301 putative selenocysteine synthase [L-seryl-tRNA(Ser) selenium transferasechromosome CDS4602085 1119 + 0.565684
mocR SC2736 putative regulatory protein, gntR familychromosome CDS2904414 1335 - 0.569288
mppA SC1672 periplasmic murein tripeptide transport protein, also negative regulator of mulitple antibiotic resistancechromosome CDS1784843 1902 - 0.50368
mppA SC1243 Periplasmic murein peptide-binding protein precurschromosome CDS1352985 1689 - 0.419775
mtr SC3220 HAAAP family, tryptophan-specific transport proteinchromosome CDS3400814 1245 - 0.550201
nanA SC3277 N-acetylneuraminate lyase (aldolase)chromosome CDS3462860 894 - 0.540268
nanT SC3276 MFS family, sialic acid transport proteinchromosome CDS3461254 1491 - 0.552649
nifS SC2537 putative aminotransferase class-Vchromosome CDS2702144 1215 - 0.55144
nin SC0342 Nin-like proteinchromosome CDS388012 873 + 0.462772
nupG SC3054 MFS family, nucleoside transportchromosome CDS3230947 1257 + 0.51074
oat SC3165 Probable ornithine aminotransferasechromosome CDS3346772 1380 + 0.544928
opbA SC1508 ABC-type proline/glycine betaine transport systems, ATPase componentchromosome CDS1606681 1149 - 0.527415
opcB SC1509 putative binding-protein-dependent transport system, inner membrane componentchromosome CDS1607829 648 - 0.552469
opdA SC3523 oligopeptidase Achromosome CDS3718071 2043 - 0.56045
oppA SC1742 ABC superfamily (periplasm), oligopeptide transport protein with chaperone propertieschromosome CDS1852733 1749 - 0.477987
oppB SC1741 ABC superfamily (membrane), oligopeptide transport proteinchromosome CDS1851691 921 - 0.509229
oppC SC1740 ABC superfamily (membrane), oligopeptide transport proteinchromosome CDS1850768 909 - 0.526953
oppD SC1739 ABC superfamily (atp-binding), oligopeptide transport proteinchromosome CDS1849749 1008 - 0.52381
oppF SC1738 ABC superfamily (atp-binding), oligopeptide transport proteinchromosome CDS1848748 1005 - 0.539303
ordL SC3068 putative oxidoreductasechromosome CDS3246997 1302 - 0.492319
otcC SC4319 putative ornithine carbamoyltransferasechromosome CDS4621219 1005 - 0.558209
oxd6A SC1267 putative ABC transporter periplasmic binding proteinchromosome CDS1370741 1641 + 0.541133
oxd6B SC1268 putative ABC transporterchromosome CDS1372378 978 + 0.52863
oxd6C SC1269 putative ABC transporterchromosome CDS1373345 813 + 0.562116
pabA SC3403 p-aminobenzoate synthetase, component IIchromosome CDS3574198 564 - 0.547872
pabB SC1818 p-aminobenzoate synthetase, component Ichromosome CDS1936342 1365 + 0.554579
pabC SC1148 4-amino-4-deoxychorismate lyasechromosome CDS1263173 810 + 0.516049
pagO SC1863 PhoPQ-activated gene; predicted integral membrane proteinchromosome CDS1976049 915 + 0.410929
pcaK SC2196 putative sugar transporterchromosome CDS2297912 1359 - 0.588668
pduU SC2064 Propanediol utilization: polyhedral bodieschromosome CDS2152149 144 + 0.569444
pduV SC2065 Propanediol utilizationchromosome CDS2152297 453 + 0.558499
pdxB SC2372 erythronate-4-phosphate dehyrogenasechromosome CDS2496765 1251 - 0.553957
pepA SC4333 aminopeptidase Achromosome CDS4634402 1512 - 0.578042
pepB SC2531 putative aminopeptidasechromosome CDS2696795 1458 - 0.561728
pepD SC0317 aminoacyl-histidine dipeptidase (peptidase D)chromosome CDS364935 1458 - 0.532236
pepE SC4069 (alpha)-aspartyl dipeptidasechromosome CDS4348688 690 - 0.578261
pepN SC1010 aminopeptidase Nchromosome CDS1124622 2745 + 0.528233
pepP SC2999 proline aminopeptidase P IIchromosome CDS3177808 1317 - 0.560364
pepQ SC3881 proline dipeptidasechromosome CDS4125921 1332 + 0.532282
pepT SC1178 putative peptidase T(aminotripeptidase)chromosome CDS1294781 1230 + 0.523577
pheA SC2669 bifuctional: chorismate mutase P; prephenate dehydratasechromosome CDS2825494 1161 + 0.541774
pheP SC0605 APC family, phenylalanene transporterchromosome CDS674351 1395 + 0.531183
phnT SC0469 2-aminoethylphosphonate transporter,ATPase componentchromosome CDS525437 1110 - 0.584685
phnV SC0467 2-aminoethylphosphonate transporter, memrane componentchromosome CDS523774 798 - 0.567669
phnW SC0472 2-aminoethylphosphonate transportchromosome CDS528622 1104 + 0.566123
pipD SC1044 Pathogenicity island encoded protein: SPI3chromosome CDS1160620 1005 - 0.486567
potA SC1177 ABC superfamily (atp_bind), spermidine/putrescine transporterchromosome CDS1293394 1137 - 0.495163
potB SC1176 ABC superfamily (membrane), spermidine/putrescine transporterchromosome CDS1292547 864 - 0.490741
potC SC1173 ABC superfamily (membrane), spermidine/putrescine transporterchromosome CDS1290112 780 - 0.515385
potD SC1172 ABC superfamily (peri_perm), spermidine/putrescine transporterchromosome CDS1289041 1047 - 0.516714
potE SC0720 APC family, putrescine/ornithine antiporterchromosome CDS803955 1320 - 0.540152
potF SC0870 ABC superfamily (peri_perm), putrescine transporterchromosome CDS976132 1113 + 0.521114
potG SC0871 ABC superfamily (atp_bind), putrescine transporterchromosome CDS977332 1134 + 0.545855
potH SC0872 ABC superfamily (membrane), putrescine transporterchromosome CDS978475 954 + 0.526205
potI SC0873 ABC superfamily (membrane), putrescine transporterchromosome CDS979425 846 + 0.573286
poxB SC0890 pyruvate dehydrogenase/oxidase FAD and thiamine PPi cofactors, cytoplasmic in absence of cofactorschromosome CDS995129 1719 - 0.571262
proA SC0323 gamma-glutamylphosphate reductasechromosome CDS371391 1251 + 0.56275
proB SC0322 gamma-glutamate kinasechromosome CDS370276 1104 + 0.557971
proC SC0427 pyrroline-5-carboxylate reductasechromosome CDS483750 810 - 0.561728
proP SC4169 MFS family, low-affinity proline transporter (proline permease II)chromosome CDS4465513 1503 + 0.530938
proV SC2743 ABC superfamily (atp_bind), glycine/betaine/proline transport proteinchromosome CDS2910635 1203 + 0.500416
proW SC2744 ABC superfamily (membrane), glycine/betaine/proline transport proteinchromosome CDS2911830 1065 + 0.593427
proX SC2745 ABC superfamily (bind_prot), glycine/betaine/proline transport proteinchromosome CDS2912964 996 + 0.537149
proY SC0442 putative APC family, proline transporterchromosome CDS498982 1533 + 0.544031
prsA SC1774 phosphoribosylpyrophosphate synthetasechromosome CDS1890675 1014 + 0.543392
ptrB SC1884 protease IIchromosome CDS1993064 2052 - 0.509259
ptsJ SC2434 putative regulatory protein, gntR familychromosome CDS2564254 1293 + 0.590101
pudB SC2047 Propanediol utilization: polyhedral bodieschromosome CDS2138866 813 + 0.597786
putP SC1076 SSS family, major sodium/proline symporterchromosome CDS1191279 1509 + 0.540093
recE SC2638 Gifsy-1 prophage RecEchromosome CDS2788179 2928 + 0.531762
rhaT SC3940 DMT Superfamily, L-rhamnose:H+ symporter proteinchromosome CDS4193941 1035 - 0.530435
rhbE SC3240 putative membrane proteinchromosome CDS3426146 966 - 0.52588
rhtC SC3858 RhtB family, threonine efflux proteinchromosome CDS4098711 621 + 0.547504
rocE SC2359 putative amino acid transporterchromosome CDS2481588 1407 - 0.533049
rspB SC1523 putative dehydrogenasechromosome CDS1621632 1020 + 0.512745
rthB SC3859 homoserine/homoserine lactone efflux proteinchromosome CDS4099371 621 - 0.550725
sapA SC1685 ABC superfamily (periplasm), peptide transport proteinchromosome CDS1796787 1674 + 0.537037
sdaA SC1820 L-serine deaminase I/L-threonine deaminase Ichromosome CDS1938570 1347 + 0.556793
sdaB SC2910 L-serine dehydratase (L-threonine deaminase 2)chromosome CDS3081826 1368 + 0.562135
sdaC SC2909 putative HAAAP family, serine transport proteinchromosome CDS3080478 1290 + 0.532558
sdhL SC2212 putative D-serine dehydratasechromosome CDS2315197 1368 - 0.550439
selA SC3607 selenocysteine synthase (with SelD)chromosome CDS3815242 1392 - 0.596264
selD SC1319 selenophosphate synthasechromosome CDS1416595 1044 + 0.57567
serA SC3003 D-3-phosphoglycerate dehydrogenasechromosome CDS3181449 1233 - 0.553122
serB SC4423 3-phosphoserine phosphatasechromosome CDS4731492 969 + 0.568627
serB SC2213 putative phosphoserine phosphatasechromosome CDS2316781 888 + 0.451577
serC SC0931 3-phosphoserine aminotransferase / phosphohydroxythreonine transaminasechromosome CDS1045428 1089 + 0.532599
setB SC2223 proton efflux pumpchromosome CDS2330238 1182 + 0.543993
shiA SC0212 putative inner membrane proteinchromosome CDS244064 1302 + 0.513057
skd SC3772 putative shikimate / quinate 5-dehydrogenasechromosome CDS4001272 819 - 0.527473
smvA SC1574 Methyl viologen resistancechromosome CDS1670630 1488 - 0.577957
solA SC1108 putative sarcosine oxidasechromosome CDS1226474 1119 - 0.550492
speA SC3026 arginine decarboxylasechromosome CDS3208416 1899 - 0.556082
speB SC3020 agmatinasechromosome CDS3197697 921 - 0.554832
speC SC3055 ornithine decarboxylase isozymechromosome CDS3232265 2178 - 0.544077
speD SC0165 S-adenosylmethionine decarboxylase, proenzymechromosome CDS190311 795 - 0.498113
speE SC0166 spermidine synthase (putrescine aminopropyltransferase)chromosome CDS191126 861 - 0.535424
speF SC0721 ornithine decarboxylase isozyme, induciblechromosome CDS805271 2199 - 0.537517
sseE SC1423 Secretion system effector SseEchromosome CDS1524745 417 + 0.453237
sufS SC1393 selenocysteine lyasechromosome CDS1493607 1221 + 0.56593
tcfD SC0302 putative fimbrail proteinchromosome CDS350498 546 + 0.452381
tdcB SC3190 threonine dehydratase, catabolicchromosome CDS3373449 990 - 0.463636
tdcC SC3189 HAAAP family, L-threonine/ L-serine permease, anaerobically induciblechromosome CDS3372097 1332 - 0.50976
tdcG SC3186 L-serine deaminasechromosome CDS3367060 1365 - 0.571429
tdh SC3631 threonine 3-dehydrogenasechromosome CDS3845183 1026 - 0.532164
tesA SC0547 multifunctional acyl-CoA thioesterase I; also functions as protease I, lysophospholipaseL(I)chromosome CDS610211 648 - 0.533951
tfpB SC1625 putative inner membrane proteinchromosome CDS1733607 363 - 0.418733
thrA SC0002 aspartokinase Ichromosome CDS337 2463 + 0.561916
thrB SC0003 homoserine kinasechromosome CDS2801 930 + 0.57957
thrC SC0004 threonine synthasechromosome CDS3734 1287 + 0.565657
trpA SC1723 tryptophan synthase, alpha proteinchromosome CDS1837404 807 + 0.571252
trpB SC1722 tryptophan synthase, beta proteinchromosome CDS1836211 1194 + 0.560301
trpC SC1721 N-(5-phosphoribosyl)anthranilate isomerase/indole-3-glycerolphosphate synthetasechromosome CDS1834843 1359 + 0.551141
trpD SC1720 anthranilate synthase, component IIchromosome CDS1833244 1596 + 0.572682
trpE SC1719 anthranilate synthase, component Ichromosome CDS1831682 1563 + 0.580934
tub SC3461 hypothetical proteinchromosome CDS3647244 1335 + 0.540824
tub SC2277 putative permeasechromosome CDS2392257 948 - 0.439873
tyrA SC2671 chorismate mutase T/prephenate dehydrogenasechromosome CDS2827581 1122 - 0.549911
tyrB SC4127 tyrosine aminotransferase, tyrosine repressiblechromosome CDS4403759 1356 + 0.55236
tyrP SC1943 HAAAP family, tyrosine-specific transport proteinchromosome CDS2052862 1212 + 0.55198
tyrR SC1676 transcriptional regulator of aromatic amino acid biosynthesis genes (aroF, aroG, tyrA) and aromatic amino acid transport, has intrinsic ATPase and phochromosome CDS1789313 1542 - 0.534371
usg SC2371 putative aspartate-semialdehyde dehydrogenasechromosome CDS2495684 1014 - 0.575937
wcaB SC2115 putative acyl transferase in colanic acid biosynthesischromosome CDS2209954 489 - 0.560327
wcaD SC2113 putative colanic acid polymerasechromosome CDS2207551 1215 - 0.428807
xapB SC2419 MFS superfamily, xanthosine permeasechromosome CDS2549148 1257 - 0.490056
yaaJ SC0006 putative AGCS family, alanine/glycine transport proteinchromosome CDS5966 1431 - 0.561146
yaaU SC0074 putative MFS family transport proteinchromosome CDS86259 1341 + 0.539896
yaeD SC0247 putative dehydratasechromosome CDS284230 582 + 0.515464
yaeR SC0235 putative lactoylglutathione lyasechromosome CDS274213 390 + 0.523077
yagE SC3462 putative dihydrodipicolinate synthetasechromosome CDS3650334 906 + 0.475717
yahN SC0406 paral putative transport proteinchromosome CDS459354 633 - 0.535545
yaiZ SC0420 putative inner membrane proteinchromosome CDS477795 216 + 0.486111
yajR SC0477 putative MFS family transporterchromosome CDS532769 1293 - 0.554524
ybdA SC0624 putative POT family transport proteinchromosome CDS696237 1245 + 0.587952
ybdL SC0634 putative aminotransferasechromosome CDS707403 1197 + 0.541353
ybgH SC0729 putative POT family transport proteinchromosome CDS818129 1716 - 0.533217
ybgJ SC0731 putative carboxylasechromosome CDS820698 657 + 0.607306
ybgK SC0732 putative carboxylasechromosome CDS821348 933 + 0.584137
ybiB SC0819 putative transferasechromosome CDS917925 975 + 0.569231
ybiK SC0842 putative asparaginasechromosome CDS943562 942 + 0.601911
ybjJ SC0862 putative transport protein/putative regulatornchromosome CDS968340 1212 - 0.575082
ycaD SC0922 putative MFS family transport proteinchromosome CDS1033561 1149 + 0.517842
ycaM SC0923 putative APC family, amino-acid transporterchromosome CDS1034927 1422 + 0.47398
ycdW SC1083 paral putative oxidoreductasechromosome CDS1205151 939 + 0.549521
ycdX SC1084 putative Histidinol phosphatase and related hydrolases of the PHP familychromosome CDS1206174 738 + 0.514905
yceE SC0423 putative permeasechromosome CDS480325 981 + 0.538226
yceE SC1101 putative MFS family transport proteinchromosome CDS1221300 1215 - 0.545679
yceL SC1114 putative MFS superfamily transport proteinchromosome CDS1231114 1209 - 0.559967
ycjj SC1400 putative amino acid permeasechromosome CDS1499484 1344 - 0.508185
yckA SC1629 putative amino acid ABC transporter permease componentchromosome CDS1737817 648 + 0.419753
ydcR SC1595 putative regulatory protein, gntR familychromosome CDS1701542 1425 - 0.530526
yddG SC1571 putative permeasechromosome CDS1667703 768 + 0.494792
ydeD SC1535 putative permease, integral membrane proteinchromosome CDS1633977 903 + 0.533776
ydeE SC1534 putative MFS family transport proteinchromosome CDS1632553 1197 - 0.517962
ydfJ SC1524 putative membrane transport proteinchromosome CDS1622705 1512 + 0.5
ydgD SC1502 putative proteasechromosome CDS1599127 822 - 0.568126
ydgI SC1495 putative amino acid transporterchromosome CDS1590703 1383 - 0.54013
ydgR SC1470 putative POT family, peptide transport proteinchromosome CDS1564135 1506 - 0.533865
ydhC SC1447 putative MFS family transport proteinchromosome CDS1543361 1206 - 0.55058
ydiB SC1378 putative shikimate 5-dehydrogenasechromosome CDS1476528 867 - 0.483276
ydiJ SC1309 Hypothetical zinc-type alcohol dehydrogenase-likechromosome CDS1405770 1044 + 0.5
ydiM SC1380 putative MFS family transport proteinchromosome CDS1479060 1212 - 0.472772
ydiN SC1379 putative MFS family transport proteinchromosome CDS1477461 1236 - 0.462783
ydjE SC1314 Hypothetical metabolite transport protein ydjEchromosome CDS1410640 1359 + 0.465048
ydjK SC1308 Hypothetical metabolite transport protein ydjKchromosome CDS1404380 1380 + 0.526087
ydjL SC1307 Hypothetical zinc-type alcohol dehydrogenase-likechromosome CDS1403277 1077 + 0.529248
yeaS SC1280 paral putative transport proteinchromosome CDS1382224 639 + 0.469484
yebQ SC1839 putative transport proteinchromosome CDS1954590 1374 + 0.549491
yecC SC1955 putative ABC-type polar amino acid transport system, ATPase componentchromosome CDS2063077 753 - 0.555113
yecS SC1956 putative ABC-type amino acid transporter, permease componentchromosome CDS2063826 669 - 0.542601
yedA SC1993 putative permeasechromosome CDS2094730 921 + 0.562432
yedO SC1957 putative 1-cyclopropane-carboxylate deaminasechromosome CDS2064515 987 - 0.576494
yeeF SC2078 putative APC family, amino acid transport proteinchromosome CDS2167140 1365 - 0.537729
yegT SC2157 putative MFS family transport proteinchromosome CDS2258789 1272 + 0.518868
yehW SC2178 putative ABC-type proline/glycine betaine transport systems, permease componentchromosome CDS2279762 732 - 0.596995
yehW SC1511 ABC-type transport systems, permease componentschromosome CDS1609417 711 - 0.544304
yehX SC2179 putative ABC-type proline/glycine betaine transport system, ATPase componentchromosome CDS2280477 948 - 0.575949
yehY SC2180 putative ABC-type proline/glycine betaine transport systems, permease componentchromosome CDS2281417 1170 - 0.594017
yeiT SC2203 putative NADPH-dependent glutamate synthase beta chain or related oxidoreductasechromosome CDS2303907 1242 + 0.504026
yejA SC2232 putative ABC transporter periplasmic binding proteinchromosome CDS2340069 1806 + 0.518272
yfaV SC2293 putative MFS family transport proteinchromosome CDS2411150 1290 - 0.53876
yfbJ SC2304 putative inner membrane proteinchromosome CDS2425225 378 + 0.539683
yfbQ SC2332 putative aminotransferase (ortho), paral putative regulatorchromosome CDS2456392 1215 + 0.515226
yfbW SC2303 putative inner membrane proteinchromosome CDS2424890 336 + 0.58631
yfcJ SC2374 putative transport proteinchromosome CDS2499003 1179 - 0.602205
yfcK SC2381 putative peptidasechromosome CDS2504346 2061 + 0.576904
yfdZ SC2405 putative aminotransferasechromosome CDS2531730 1239 - 0.540759
yfhB SC2564 putatative phosphoserine phosphatasechromosome CDS2735030 636 - 0.542453
yfiK SC2650 paral putative transport proteinchromosome CDS2802480 588 + 0.515306
ygaY SC2746 putative inner membrane proteinchromosome CDS2914124 1185 + 0.592405
ygeD SC2948 putative efflux protein, resistance proteinchromosome CDS3126370 1203 - 0.586866
ygiC SC3132 putative glutathionylspermidine synthasechromosome CDS3311694 1164 + 0.510309
ygjU SC3172 putative dicarboxylate permeasechromosome CDS3355563 1245 + 0.559839
yhaO SC3185 putative HAAAP family transport proteinchromosome CDS3365414 1332 - 0.503003
yhfC SC3406 putative MFS family transport proteinchromosome CDS3576510 1182 + 0.547377
yhhS SC3510 putative MFS family transport proteinchromosome CDS3702337 1260 - 0.581746
yhiP SC3521 putative POT family, peptide transport proteinchromosome CDS3715742 1473 + 0.508486
yhjE SC0560 putative permeasechromosome CDS625447 1248 + 0.459936
yhjE SC3543 putative MFS family transport proteinchromosome CDS3742953 1323 + 0.58579
yhjV SC3556 putative HAAAP family transport proteinchromosome CDS3759690 1335 + 0.4397
yhjX SC2569 putative permeasechromosome CDS2739876 1197 - 0.460317
yicL SC3686 putative permease, integral membrane proteinchromosome CDS3904305 804 + 0.534826
yidY SC3761 putative MFS family tranport protein (1st mdule)chromosome CDS3988752 1188 + 0.54798
yieO SC3800 putative MFS family tranport protein (1st mdule)chromosome CDS4032580 1428 - 0.518908
yifK SC3835 putative APC family, amino-acid transport protein, permease proteinchromosome CDS4075216 1386 + 0.541847
yifZ SC4269 putative permeasechromosome CDS4566793 927 + 0.511327
yigM SC3862 paral putative transport proteinchromosome CDS4102015 900 + 0.551111
yijD SC4017 putative inner membrane proteinchromosome CDS4280599 360 + 0.519444
yjdE SC4173 putative APC family, putrescine/ornithine transport protein, crypticchromosome CDS4470704 1338 - 0.567265
yjdL SC2555 putative POT family, di-/tripeptide transport proteinchromosome CDS2722757 1461 + 0.563997
yjeH SC4207 putative transporter, cytoplasmic membrane proteinchromosome CDS4507958 1242 - 0.506441
yjeK SC4212 putative aminomutasechromosome CDS4513242 1029 - 0.549077
yjeM SC4224 putative APC family, amino-acid transport proteinchromosome CDS4521998 1503 + 0.482369
yjiJ SC4370 putative sugar transporterchromosome CDS4676958 1185 - 0.562869
yjiO SC4372 putative MFS family transport proteinchromosome CDS4679720 1242 - 0.577295
yjjN SC3023 putative zinc-binding dehydrogenasechromosome CDS3202862 1017 - 0.513274
yliB SC0844 putative ABC transporter periplasmic binding proteinchromosome CDS946418 1539 + 0.529565
yliC SC0845 putative ABC transporter periplasmic binding proteinchromosome CDS948083 855 + 0.554386
yliD SC0846 putative ABC transporter inner membrane componentchromosome CDS948940 912 + 0.551535
yneH SC1542 putative glutaminasechromosome CDS1640792 927 + 0.545847
ynfM SC0373 putative permeasechromosome CDS415842 1338 + 0.426756
ynfM SC1504 putative MFS familty transport proteinchromosome CDS1600860 1254 - 0.550239
ypfK SC2451 putative inner membrane proteinchromosome CDS2577886 330 + 0.442424
yqeG SC2961 putative transport proteinchromosome CDS3141423 1230 + 0.469919
ytfF SC4276 putative cationic amino acid transporterchromosome CDS4574655 966 - 0.580745