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2026-03-13 15:13:05

Gene list

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COG category: Amino acid transport and metabolism
Organism: Escherichia coli K12, K-12

Number of genes found: 445

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Escherichia coli K12, K-12
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA b2322 putative transport proteinchromosome CDS2436964 1179 - 0.565734
NA b2680 orf, hypothetical proteinchromosome CDS2806338 267 + 0.546816
NA b2681 putative transport proteinchromosome CDS2806598 918 + 0.541394
NA b2324 putative peptidasechromosome CDS2439726 2067 + 0.528302
adiA b4117 biodegradative arginine decarboxylasechromosome CDS4336277 2271 - 0.52664
aegA b2468 putative oxidoreductase, Fe-S subunit (anaerobically expressed gene)chromosome CDS2581568 1980 - 0.557071
allC b0516 allantoate amidohydrolasechromosome CDS543281 1236 - 0.513754
ampG b0433 regulates beta-lactamase synthesischromosome CDS451294 1476 - 0.536585
ansA b1767 cytoplasmic L-asparaginase Ichromosome CDS1848884 1017 + 0.511308
ansB b2957 periplasmic L-asparaginase IIchromosome CDS3097704 1047 - 0.526266
ansP b1453 L-asparagine permeasechromosome CDS1522505 1551 - 0.514507
araE b2841 low-affinity L-arabinose transport system proton symport proteinchromosome CDS2978786 1419 - 0.511628
arcC b0521 putative carbamate kinase (EC 2.7.2.2)chromosome CDS549662 894 + 0.569351
argA b2818 N-acetylglutamate synthase; amino acid acetyltransferasechromosome CDS2947264 1332 + 0.525526
argB b3959 acetylglutamate kinasechromosome CDS4154036 777 + 0.554698
argC b3958 N-acetyl-gamma-glutamylphosphate reductasechromosome CDS4153024 1005 + 0.535323
argD b3359 acetylornithine delta-aminotransferasechromosome CDS3486982 1221 - 0.545455
argE b3957 acetylornithine deacetylasechromosome CDS4151719 1152 - 0.517361
argF b0273 ornithine carbamoyltransferase 2, chain Fchromosome CDS288525 1005 - 0.58806
argG b3172 argininosuccinate synthetasechromosome CDS3316659 1344 + 0.526042
argH b3960 argininosuccinate lyasechromosome CDS4154873 1374 + 0.564774
argI b4254 ornithine carbamoyltransferase 1chromosome CDS4475330 1005 - 0.521393
argK b2918 arginine transport ATPasechromosome CDS3061009 996 + 0.539157
argT b2310 lysine-, arginine-, ornithine-binding periplasmic proteinchromosome CDS2425031 783 - 0.501916
aroA b0908 5-enolpyruvylshikimate-3-phosphate synthetasechromosome CDS958035 1284 + 0.507788
aroB b3389 3-dehydroquinate synthasechromosome CDS3515420 1089 - 0.541781
aroC b2329 chorismate synthasechromosome CDS2444410 1086 - 0.567219
aroD b1693 3-dehydroquinate dehydratasechromosome CDS1772710 759 + 0.504611
aroE b3281 dehydroshikimate reductasechromosome CDS3428042 819 - 0.489621
aroF b2601 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tyrosine repressible)chromosome CDS2738102 1071 - 0.518207
aroG b0754 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible)chromosome CDS784856 1053 + 0.521368
aroH b1704 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tryptophan repressible)chromosome CDS1786459 1047 + 0.531041
aroK b3390 shikimate kinase Ichromosome CDS3516565 723 - 0.485477
aroL b0388 shikimate kinase IIchromosome CDS405629 525 + 0.521905
aroP b0112 aromatic amino acid transport proteinchromosome CDS120178 1374 - 0.526929
artI b0863 arginine 3rd transport system periplasmic binding proteinchromosome CDS901480 732 - 0.502732
artJ b0860 arginine 3rd transport system periplasmic binding proteinchromosome CDS899067 732 - 0.448087
artM b0861 arginine 3rd transport system permease proteinchromosome CDS900089 669 - 0.521674
artP b0864 ATP-binding component of 3rd arginine transport systemchromosome CDS902229 729 - 0.526749
artQ b0862 arginine 3rd transport system permease proteinchromosome CDS900757 717 - 0.549512
asd b3433 aspartate-semialdehyde dehydrogenasechromosome CDS3571798 1104 - 0.541667
asnA b3744 asparagine synthetase Achromosome CDS3925178 993 + 0.564955
asnB b0674 asparagine synthetase Bchromosome CDS696736 1665 - 0.521321
aspA b4139 aspartate ammonia-lyase (aspartase)chromosome CDS4364914 1482 - 0.488529
aspC b0928 aspartate aminotransferasechromosome CDS983742 1191 - 0.52225
astA b1747 arginine succinyltransferasechromosome CDS1827755 1035 - 0.560386
astB b1745 succinylarginine dihydrolasechromosome CDS1824940 1344 - 0.555804
astC b1748 acetylornithine delta-aminotransferasechromosome CDS1828786 1221 - 0.550369
astE b1744 succinylglutamate desuccinylasechromosome CDS1823979 969 - 0.53354
avtA b3572 alanine-alpha-ketoisovalerate (or valine-pyruvate) transaminase, transaminase Cchromosome CDS3737728 1254 + 0.521531
bcr b2182 bicyclomycin resistance protein; transmembrane proteinchromosome CDS2276592 1191 - 0.533165
betA b0311 choline dehydrogenase, a flavoproteinchromosome CDS324801 1671 - 0.570916
brnQ b0401 branched chain amino acid transport system II carrier proteinchromosome CDS418815 1320 + 0.556061
cadA b4131 lysine decarboxylase 1chromosome CDS4354493 2148 - 0.475791
cadB b4132 transport of lysine/cadaverinechromosome CDS4356720 1335 - 0.494382
carA b0032 carbamoyl-phosphate synthetase, glutamine (small) subunitchromosome CDS29651 1149 + 0.533507
carB b0033 carbamoyl-phosphate synthase large subunitchromosome CDS30817 3222 + 0.562694
cmr b0842 proton motive force efflux pumpchromosome CDS882896 1233 + 0.523925
csdA b2810 cysteine sulfinate desulfinasechromosome CDS2941359 1206 + 0.558872
cycA b4208 transport of D-alanine, D-serine, and glycinechromosome CDS4427887 1413 + 0.525832
cysD b2752 ATP:sulfurylase (ATP:sulfate adenylyltransferase), subunit 2chromosome CDS2873443 909 - 0.530253
cysE b3607 serine acetyltransferasechromosome CDS3779764 822 - 0.53528
cysH b2762 3'-phosphoadenosine 5'-phosphosulfate reductasechromosome CDS2885600 735 - 0.507483
cysK b2414 cysteine synthase A, O-acetylserine sulfhydrolase Achromosome CDS2530431 972 + 0.503086
cysM b2421 cysteine synthase B, O-acetylserine sulfhydrolase Bchromosome CDS2536694 912 - 0.564693
cysZ b2413 required for sulfate transportchromosome CDS2529485 762 + 0.501312
dadA b1189 D-amino acid dehydrogenase subunitchromosome CDS1236794 1299 + 0.562741
dapA b2478 dihydrodipicolinate synthasechromosome CDS2596904 879 - 0.517634
dapB b0031 dihydrodipicolinate reductasechromosome CDS28374 822 + 0.534063
dapD b0166 2,3,4,5-tetrahydropyridine-2-carboxylateN-succin yltransferasechromosome CDS185123 825 - 0.530909
dapE b2472 N-succinyl-diaminopimelate deacylasechromosome CDS2589629 1128 + 0.534574
dapF b3809 diaminopimelate epimerasechromosome CDS3992782 828 + 0.550725
dcp b1538 dipeptidyl carboxypeptidase IIchromosome CDS1623359 2046 - 0.499511
dgoT b3691 D-galactonate transportchromosome CDS3868461 1338 - 0.529895
dppA b3544 dipeptide transport proteinchromosome CDS3704121 1608 - 0.515547
dppB b3543 dipeptide transport system permease protein 1chromosome CDS3702794 1020 - 0.564706
dppC b3542 dipeptide transport system permease protein 2chromosome CDS3701882 903 - 0.590255
dppD b3541 putative ATP-binding component of dipeptide transport systemchromosome CDS3700888 984 - 0.567073
dppF b3540 putative ATP-binding component of dipeptide transport systemchromosome CDS3699887 1005 - 0.561194
dsdA b2366 D-serine dehydratase (deaminase)chromosome CDS2477224 1329 + 0.508653
dsdX b2365 transport system permease (serine?)chromosome CDS2475869 1338 + 0.487294
eamA b1533 amino acid metabolite efflux pumpchromosome CDS1618262 801 - 0.49563
edd b1851 6-phosphogluconate dehydratasechromosome CDS1930817 1812 - 0.536424
emrB b2686 multidrug resistance; probably membrane translocasechromosome CDS2810638 1539 + 0.565952
emrD b3673 2-module integral membrane pump; multidrug resistancechromosome CDS3851939 1191 + 0.570109
emrY b2367 multidrug resistance protein Ychromosome CDS2478660 1539 - 0.416504
eutA b2451 orf, hypothetical proteinchromosome CDS2563503 1404 - 0.591168
eutC b2440 ethanolamine ammonia-lyase, light chainchromosome CDS2554432 888 - 0.566441
eutH b2452 ethanolamine utilization; homolog of Salmonella putative transport proteinchromosome CDS2564903 1227 - 0.551752
eutJ b2454 ethanolamine utilization; homolog of Salmonella genechromosome CDS2567523 837 - 0.586619
eutL b2439 orf, hypothetical proteinchromosome CDS2553763 660 - 0.563636
eutP b2461 orf, hypothetical proteinchromosome CDS2573000 480 - 0.497917
eutQ b2460 orf, hypothetical proteinchromosome CDS2572324 702 - 0.559829
eutT b2459 orf, hypothetical proteinchromosome CDS2571524 804 - 0.585821
exuT b3093 transport of hexuronateschromosome CDS3243126 1419 + 0.542636
fliY b1920 putative periplasmic binding transport proteinchromosome CDS1997609 801 - 0.498127
fsr b0479 fosmidomycin resistance proteinchromosome CDS502700 1221 - 0.524161
gabP b2663 transport permease protein of gamma-aminobutyratechromosome CDS2792275 1401 + 0.513205
gabT b2662 4-aminobutyrate aminotransferase activitychromosome CDS2790757 1281 + 0.593287
gadA b3517 glutamate decarboxylase isozymechromosome CDS3664203 1401 - 0.539615
gadB b1493 glutamate decarboxylase isozymechromosome CDS1568669 1401 - 0.533191
galP b2943 galactose-proton symport of transport systemchromosome CDS3086306 1395 + 0.531183
garP b3127 putative transport proteinchromosome CDS3271595 1335 - 0.513109
gatD b2091 galactitol-1-phosphate dehydrogenasechromosome CDS2169857 1041 - 0.487992
gcvH b2904 in glycine cleavage complex, carrier of aminomethyl moiety via covalently bound lipoyl cofactorchromosome CDS3047182 390 - 0.525641
gcvP b2903 glycine decarboxylase, P protein of glycine cleavage systemchromosome CDS3044190 2874 - 0.559499
gcvR b2479 transcriptional regulation of gcv operonchromosome CDS2597862 639 + 0.483568
gcvT b2905 aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage systemchromosome CDS3047595 1095 - 0.546119
gdhA b1761 NADP-specific glutamate dehydrogenasechromosome CDS1840395 1344 + 0.532738
ggt b3447 gamma-glutamyltranspeptidasechromosome CDS3583104 1743 - 0.550201
glnA b3870 glutamine synthetasechromosome CDS4054648 1410 - 0.529078
glnB b2553 regulatory protein P-II for glutamine synthetasechromosome CDS2685092 339 - 0.510324
glnH b0811 periplasmic glutamine-binding protein; permeasechromosome CDS846481 747 - 0.487282
glnK b0450 nitrogen regulatory protein P-II 2chromosome CDS471822 339 + 0.507375
glnP b0810 glutamine high-affinity transport system; membrane componentchromosome CDS845683 660 - 0.534849
glnQ b0809 ATP-binding component of glutamine high-affinity transport systemchromosome CDS844964 723 - 0.539419
gloA b1651 lactoylglutathione lyasechromosome CDS1725861 408 + 0.514706
glpB b2242 sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunitchromosome CDS2352287 1260 + 0.55873
gltB b3212 glutamate synthase, large subunitchromosome CDS3352654 4554 + 0.570487
gltD b3213 glutamate synthase, small subunitchromosome CDS3357220 1419 + 0.561663
gltI b0655 glutamate/aspartate periplasmic binding proteinchromosome CDS686062 909 - 0.487349
gltJ b0654 glutamate/aspartate transport system permeasechromosome CDS685152 741 - 0.524966
gltK b0653 glutamate/aspartate transport system permeasechromosome CDS684478 675 - 0.502222
gltL b0652 ATP-binding protein of glutamate/aspartate transport systemchromosome CDS683753 726 - 0.523416
gltS b3653 glutamate transportchromosome CDS3825483 1206 - 0.536484
glyA b2551 serine hydroxymethyltransferasechromosome CDS2682276 1254 - 0.533493
gmhB b0200 D,D-heptose 1,7-bisphosphate phosphatasechromosome CDS222833 576 + 0.501736
gntP b4321 gluconate transport system permease 3chromosome CDS4547976 1344 - 0.530506
gntT b3415 high-affinity transport of gluconate / gluconate permeasechromosome CDS3544581 1317 + 0.533789
gntU b4476 split gene, low-affinity gluconate transport permease protein in GNT I systemchromosome CDS3573744 1341 - 0.550336
goaG b1302 4-aminobutyrate aminotransferasechromosome CDS1363574 1266 + 0.576619
gss b2988 glutathionylspermidine synthetase/amidasechromosome CDS3134685 1860 - 0.524731
gudP b2789 putative D-glucarate permease (MFS family)chromosome CDS2918770 1353 - 0.522542
hcaT b2536 MFS (major facilitator superfamily) transporterchromosome CDS2664729 1140 - 0.564912
hisA b2024 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'- phosphoribosyl)-4-imidazolecarboxamide isomerasechromosome CDS2093146 741 + 0.5722
hisB b2022 imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatasechromosome CDS2091489 1071 + 0.533147
hisC b2021 histidinol-phosphate aminotransferasechromosome CDS2090422 1071 + 0.553688
hisD b2020 L-histidinal:NAD+ oxidoreductase; L-histidinol:NAD+ oxidoreductasechromosome CDS2089121 1305 + 0.580843
hisF b2025 imidazole glycerol phosphate synthase subunit in heterodimer with HisH = imidazole glycerol phsphate synthase holoenzymechromosome CDS2093868 777 + 0.518661
hisG b2019 ATP phosphoribosyltransferasechromosome CDS2088216 900 + 0.541111
hisH b2023 glutamine amidotransferase subunit of heterodimer with HisF = imidazole glycerol phosphate synthase holoenzymechromosome CDS2092559 591 + 0.566836
hisI b2026 phosphoribosyl-amp cyclohydrolase; phosphoribosyl-ATP pyrophosphatasechromosome CDS2094638 612 + 0.545752
hisJ b2309 histidine-binding periplasmic protein of high-affinity histidine transport systemchromosome CDS2424028 783 - 0.487867
hisM b2307 histidine transport, membrane protein Mchromosome CDS2422539 717 - 0.496513
hisP b2306 ATP-binding component of histidine transportchromosome CDS2421758 774 - 0.51938
hisQ b2308 histidine transport system permease proteinchromosome CDS2423252 687 - 0.525473
idnD b4267 L-idonate dehydrogenasechromosome CDS4491398 1032 - 0.473837
idnT b4265 L-idonate transporterchromosome CDS4489229 1320 - 0.506061
ilvA b3772 threonine deaminase (dehydratase)chromosome CDS3953354 1545 + 0.587702
ilvB b3671 acetolactate synthase I,valine-sensitive, large subunitchromosome CDS3849119 1689 - 0.563055
ilvC b3774 ketol-acid reductoisomerasechromosome CDS3955993 1476 + 0.53794
ilvD b3771 dihydroxyacid dehydratasechromosome CDS3951501 1851 + 0.563479
ilvE b3770 branched-chain amino-acid aminotransferasechromosome CDS3950507 930 + 0.549462
ilvG b4488 acetolactate synthase II, valine insensitive, large subunitchromosome pseudo3948583 1645 + 0.546505
ilvG b4488 chromosome pseudo3948583 1645 + 0.546505
ilvH b0078 acetolactate synthase III, valine sensitive, small subunitchromosome CDS87357 492 + 0.502033
ilvI b0077 acetolactate synthase III, valine sensitive, large subunitchromosome CDS85540 1815 + 0.525069
ilvN b3670 acetolactate synthase I, valine sensitive, small subunitchromosome CDS3848825 291 - 0.484536
iscS b2530 cysteine desulfurasechromosome CDS2658339 1215 - 0.533333
kgtP b2587 alpha-ketoglutarate permeasechromosome CDS2722470 1299 - 0.487298
lacY b0343 galactoside permease (lactose permease, M protein) (MFS family)chromosome CDS361150 1254 - 0.463317
ldcC b0186 lysine decarboxylase 2, constitutivechromosome CDS209679 2142 + 0.50887
leuA b0074 2-isopropylmalate synthasechromosome CDS81958 1572 - 0.529898
leuB b0073 3-isopropylmalate dehydrogenasechromosome CDS80867 1095 - 0.555251
leuC b0072 3-isopropylmalate isomerase (dehydratase) subunitchromosome CDS79464 1401 - 0.557459
leuD b0071 isopropylmalate isomerase subunitchromosome CDS78848 606 - 0.514852
livF b3454 ATP-binding component of leucine transportchromosome CDS3590747 726 - 0.566116
livG b3455 ATP-binding component of high-affinity branched-chain amino acid transport systemchromosome CDS3591462 768 - 0.552083
livH b3457 high-affinity branched-chain amino acid transport system; membrane componentchromosome CDS3593500 927 - 0.562028
livJ b3460 high-affinity branched-chain amino acid transport protein (ABC superfamily, peri_bind)chromosome CDS3596578 1104 - 0.544384
livK b3458 high-affinity leucine-specific transport system; periplasmic binding proteinchromosome CDS3594474 1110 - 0.541441
livM b3456 high-affinity branched-chain amino acid transportchromosome CDS3592226 1278 - 0.565728
ltaE b0870 low-specificity L-threonine aldolasechromosome CDS907516 1002 - 0.561876
lysA b2838 diaminopimelate decarboxylasechromosome CDS2975659 1263 - 0.530483
lysC b4024 aspartokinase III, lysine sensitivechromosome CDS4229907 1350 - 0.538519
lysP b2156 lysine-specific permeasechromosome CDS2245085 1470 - 0.534694
malY b1622 cystathionine beta-lyase; maltose regulon modulatorchromosome CDS1698981 1173 + 0.509804
metA b4013 homoserine transsuccinylasechromosome CDS4212303 930 + 0.5
metB b3939 cystathionine gamma-synthasechromosome CDS4126695 1161 + 0.549526
metC b3008 cystathionine beta-lyase (beta-cystathionase)chromosome CDS3150258 1188 + 0.510101
metE b3829 tetrahydropteroyltriglutamatemethyltransferasechromosome CDS4011076 2262 + 0.562334
metF b3941 5,10-methylenetetrahydrofolate reductasechromosome CDS4130639 891 + 0.518519
metH b4019 B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of metE and metFchromosome CDS4221851 3684 + 0.55836
metJ b3938 repressor of all met genes but metFchromosome CDS4126101 318 - 0.518868
metL b3940 aspartokinase II and homoserine dehydrogenase IIchromosome CDS4127858 2433 + 0.583231
mhpE b0352 4-hydroxy-2-ketovalerate aldolasechromosome CDS373092 1014 + 0.565089
mmuM b0261 S-methylmethionine:homocysteinemethyltransferasechromosome CDS275939 933 + 0.60343
mmuP b0260 S-methylmethionine permeasechromosome CDS274525 1428 + 0.544818
mppA b1329 periplasmic murein tripeptide (L-Ala-gamma-D-Glut-m-DAP) permeasechromosome CDS1391230 1635 + 0.478899
mtr b3161 tryptophan-specific transport proteinchromosome CDS3302595 1245 - 0.530924
nanA b3225 N-acetylneuraminate lyase (aldolase); catabolism of sialic acid; not K-12?chromosome CDS3370705 894 - 0.520134
nanT b3224 sialic acid transporterchromosome CDS3369106 1521 - 0.553583
nikA b3476 periplasmic binding protein for nickelchromosome CDS3611690 1575 + 0.533333
nikB b3477 transport of nickel, membrane proteinchromosome CDS3613264 945 + 0.584127
nikC b3478 transport of nickel, membrane proteinchromosome CDS3614205 834 + 0.609113
nikD b3479 ATP-binding protein of nickel transport systemchromosome CDS3615038 765 + 0.592157
nikE b3480 ATP-binding protein of nickel transport systemchromosome CDS3615799 807 + 0.562577
nupG b2964 transport of nucleosides, permease proteinchromosome CDS3103688 1305 + 0.493487
oppA b1243 oligopeptide transport; periplasmic binding proteinchromosome CDS1299206 1632 + 0.477328
oppB b1244 oligopeptide transport permease proteinchromosome CDS1300923 921 + 0.457112
oppC b1245 homolog of Salmonella oligopeptide transport permease proteinchromosome CDS1301858 909 + 0.523652
oppD b1246 homolog of Salmonella ATP-binding protein of oligopeptide ABC transport systemchromosome CDS1302778 1014 + 0.517751
oppF b1247 homolog of Salmonella ATP-binding protein of oligopeptide ABC transport systemchromosome CDS1303788 1005 + 0.515423
ordL b1301 probable oxidoreductasechromosome CDS1362256 1281 + 0.582358
pabA b3360 p-aminobenzoate synthetase, component IIchromosome CDS3488288 564 - 0.533688
pabB b1812 p-aminobenzoate synthetase, component Ichromosome CDS1892829 1362 + 0.509545
pabC b1096 4-amino-4-deoxychorismate lyasechromosome CDS1152523 810 + 0.506173
pdxB b2320 erythronate-4-phosphate dehyrogenasechromosome CDS2434737 1137 - 0.530343
pepA b4260 aminopeptidase A/Ichromosome CDS4482463 1512 - 0.55291
pepB b2523 putative peptidasechromosome CDS2653097 1371 - 0.563822
pepD b0237 aminoacyl-histidine dipeptidase (peptidase D)chromosome CDS254259 1458 - 0.513717
pepE b4021 peptidase E, a dipeptidase where amino-terminal residue is aspartatechromosome CDS4227476 690 - 0.543478
pepN b0932 aminopeptidase Nchromosome CDS989845 2613 + 0.534635
pepP b2908 proline aminopeptidase P IIchromosome CDS3051537 1326 - 0.535445
pepQ b3847 proline dipeptidasechromosome CDS4029184 1332 + 0.536787
pepT b1127 putative peptidase Tchromosome CDS1185067 1227 + 0.498778
pheA b2599 chorismate mutase-P and prephenate dehydratasechromosome CDS2735767 1161 + 0.491817
pheP b0576 phenylalanine-specific transport systemchromosome CDS601182 1377 + 0.525054
potA b1126 ATP-binding component of spermidine/putrescine transportchromosome CDS1183681 1137 - 0.508355
potB b1125 spermidine/putrescine transport system permeasechromosome CDS1182840 828 - 0.508454
potC b1124 spermidine/putrescine transport system permeasechromosome CDS1182049 795 - 0.501887
potD b1123 spermidine/putrescine periplasmic transport proteinchromosome CDS1181006 1047 - 0.508118
potE b0692 putrescine transport proteinchromosome CDS716169 1320 - 0.506061
potF b0854 periplasmic putrescine-binding protein; permease proteinchromosome CDS893007 1113 + 0.508536
potG b0855 ATP-binding component of putrescine transport systemchromosome CDS894133 1215 + 0.557202
potH b0856 putrescine transport protein; permeasechromosome CDS895357 954 + 0.509434
potI b0857 putrescine transport protein; permeasechromosome CDS896307 846 + 0.547281
poxB b0871 pyruvate oxidasechromosome CDS908554 1719 - 0.54043
prlC b3498 oligopeptidase Achromosome CDS3641163 2043 - 0.547234
proA b0243 gamma-glutamylphosphate reductasechromosome CDS260727 1254 + 0.543062
proB b0242 gamma-glutamate kinasechromosome CDS259612 1104 + 0.5625
proC b0386 pyrroline-5-carboxylate reductasechromosome CDS404059 810 - 0.545679
proP b4111 low-affinity transport system; proline permease IIchromosome CDS4328525 1503 + 0.504325
proV b2677 ATP-binding component of transport system for glycine, betaine and prolinechromosome CDS2802837 1203 + 0.490441
proW b2678 high-affinity transport system for glycine betaine and prolinechromosome CDS2804032 1065 + 0.581221
proX b2679 high-affinity transport system for glycine betaine and prolinechromosome CDS2805154 993 + 0.52568
proY b0402 proline permease transport proteinchromosome CDS420210 1374 + 0.529112
prsA b1207 phosphoribosylpyrophosphate synthetasechromosome CDS1260151 948 - 0.525316
ptrB b1845 protease IIchromosome CDS1924803 2061 - 0.498302
putP b1015 major sodium/proline symporterchromosome CDS1078528 1509 + 0.536779
rhaT b3907 rhamnose transportchromosome CDS4097514 1035 - 0.516908
rhtB b3824 amino acid exporter (homoserine, HSL)chromosome CDS4006462 621 - 0.521739
rhtC b3823 amino acid exporter (threonine)chromosome CDS4005780 621 + 0.52496
rspB b1580 starvation sensing proteinchromosome CDS1650920 1020 - 0.44902
sapA b1294 homolog of Salmonella peptide transport periplasmic proteinchromosome CDS1353491 1644 - 0.542579
sapD b1291 putative ATP-binding protein of peptide transport systemchromosome CDS1350660 993 - 0.513595
sdaA b1814 L-serine deaminasechromosome CDS1894956 1365 + 0.539927
sdaB b2797 L-serine dehydratase (deaminase), L-SD2chromosome CDS2927598 1368 + 0.549708
sdaC b2796 probable serine transporterchromosome CDS2926251 1290 + 0.523256
selA b3591 selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferasechromosome CDS3757881 1392 - 0.560345
selD b1764 selenophosphate synthase, H(2)Se added to acrylyl-tRNAchromosome CDS1844989 1044 - 0.549808
serA b2913 D-3-phosphoglycerate dehydrogenasechromosome CDS3055200 1233 - 0.529603
serB b4388 3-phosphoserine phosphatasechromosome CDS4622918 969 + 0.566563
serC b0907 3-phosphoserine aminotransferasechromosome CDS956876 1089 + 0.501377
setA b0070 Sugar efflux proteinchromosome CDS77621 1179 + 0.485157
setB b2170 sugar efflux proteinchromosome CDS2261885 1182 + 0.530457
shiA b1981 shikimate transporterchromosome CDS2051667 1317 + 0.504176
solA b1059 sarcosine oxidase-like proteinchromosome CDS1118691 1119 - 0.524576
speA b2938 biosynthetic arginine decarboxylasechromosome CDS3081957 1977 - 0.542742
speB b2937 agmatinasechromosome CDS3080899 921 - 0.546145
speC b2965 ornithine decarboxylase isozymechromosome CDS3105042 2196 - 0.522313
speD b0120 S-adenosylmethionine decarboxylasechromosome CDS134788 795 - 0.461635
speE b0121 spermidine synthase = putrescine aminopropyltransferasechromosome CDS135598 867 - 0.507497
speF b0693 ornithine decarboxylase isozyme, induciblechromosome CDS717485 2199 - 0.493406
sufS b1680 selenocysteine lyase; involved in formation of FhuF [2Fe-2S] clusterchromosome CDS1757327 1221 - 0.548731
tdcB b3117 threonine dehydratase, catabolicchromosome CDS3263061 990 - 0.463636
tdcC b3116 anaerobically inducible L-threonine, L-serine permeasechromosome CDS3261708 1332 - 0.498498
tdcG b4471 L-serine dehydratasechromosome CDS3256307 1365 - 0.534066
tdh b3616 threonine dehydrogenasechromosome CDS3788343 1026 - 0.51462
tesA b0494 acyl-CoA thioesterase I; also functions as protease Ichromosome CDS518363 627 - 0.527911
tfaQ b1546 tail fiber assembly protein homolog from lambdoid prophage Qinchromosome CDS1632334 576 - 0.482639
tfaR b1373 tail fiber assembly protein homolog from lambdoid prophage Racchromosome CDS1430435 576 + 0.480903
thrA b0002 bifunctional: aspartokinase I (N-terminal); homoserine dehydrogenase I (C-terminal)chromosome CDS337 2463 + 0.530654
thrB b0003 homoserine kinasechromosome CDS2801 933 + 0.562701
thrC b0004 threonine synthasechromosome CDS3734 1287 + 0.528361
tnaA b3708 tryptophanasechromosome CDS3886738 1431 + 0.50594
tnaB b3709 low affinity tryptophan permeasechromosome CDS3888259 1248 + 0.464744
trpA b1260 tryptophan synthase, alpha proteinchromosome CDS1314440 807 - 0.535316
trpB b1261 tryptophan synthase, beta proteinchromosome CDS1315246 1194 - 0.546901
trpC b1262 N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetasechromosome CDS1316451 1362 - 0.5279
trpD b1263 anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferasechromosome CDS1317813 1596 - 0.56391
trpE b1264 anthranilate synthase component Ichromosome CDS1319408 1563 - 0.543826
tyrA b2600 chorismate mutase-T and prephenate dehydrogenasechromosome CDS2736970 1122 - 0.523173
tyrB b4054 tyrosine aminotransferase, tyrosine repressiblechromosome CDS4265137 1194 + 0.527638
tyrP b1907 tyrosine-specific transport systemchromosome CDS1987705 1212 + 0.512376
tyrR b1323 transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transportchromosome CDS1384744 1542 + 0.521401
usg b2319 putative PTS system enzyme II A componentchromosome CDS2433658 1014 - 0.54931
wcaB b2058 putative transferasechromosome CDS2130091 489 - 0.539877
wcaD b2056 putative colanic acid polymerasechromosome CDS2127685 1218 - 0.420361
xapB b2406 xanthosine permeasechromosome CDS2520751 1257 - 0.480509
xasA b1492 acid sensitivity protein, putative transporterchromosome CDS1566978 1536 - 0.48112
xylE b4031 xylose-proton symportchromosome CDS4238802 1476 - 0.495935
yaaJ b0007 inner membrane transport proteinchromosome CDS6529 1431 - 0.533194
yaaU b0045 putative transport proteinchromosome CDS45807 1332 + 0.533033
yaeR b0187 orf, hypothetical proteinchromosome CDS211850 417 + 0.496403
yagE b0268 putative lyase/synthasechromosome CDS281481 930 + 0.611828
yagF b0269 putative dehydratasechromosome CDS282425 1968 + 0.667175
yahC b0317 orf, hypothetical proteinchromosome CDS333749 498 - 0.528112
yahI b0323 putative kinase (EC 2.7.2.2).chromosome CDS339389 951 + 0.561514
yahN b0328 putative cytochrome subunit of dehydrogenasechromosome CDS344890 672 - 0.494048
yajR b0427 putative transport proteinchromosome CDS444526 1371 - 0.525894
ybaS b0485 putative glutaminasechromosome CDS510865 933 + 0.531618
ybaT b0486 putative amino acid/amine transport proteinchromosome CDS511800 1293 + 0.532869
ybdA b0591 putative transportchromosome CDS621523 1251 + 0.580336
ybdL b0600 putative aminotransferasechromosome CDS632809 1161 + 0.538329
ybdR b0608 putative oxidoreductasechromosome CDS641311 1239 + 0.501211
ybfB b0702 orf, hypothetical proteinchromosome CDS732999 327 + 0.311927
ybgH b0709 putative transport proteinchromosome CDS740298 1482 - 0.524292
ybgJ b0711 putative carboxylasechromosome CDS742816 657 + 0.578387
ybgK b0712 putative carboxylasechromosome CDS743466 933 + 0.555198
ybiB b0800 putative enzymechromosome CDS834471 963 + 0.556594
ybiK b0828 putative asparaginasechromosome CDS865791 966 + 0.565217
ybjJ b0845 putative DEOR-type transcriptional regulatorchromosome CDS885354 1209 - 0.549214
ybjM b0848 orf, hypothetical proteinchromosome CDS889312 378 + 0.497355
ybjP b0865 putative lipoproteinchromosome CDS903175 516 - 0.53876
ycaD b0898 putative transport protein (MFS family)chromosome CDS945094 1149 + 0.520453
ycaM b0899 putative transporterchromosome CDS946260 1623 + 0.45841
ycdW b1033 putative dehydrogenasechromosome CDS1097070 978 + 0.510225
ycdX b1034 orf, hypothetical proteinchromosome CDS1098102 738 + 0.48374
yceE b1053 putative transport proteinchromosome CDS1113487 1227 - 0.524857
yceL b1065 orf, hypothetical proteinchromosome CDS1123341 1239 - 0.552058
yciQ b1268 orf, hypothetical proteinchromosome CDS1322770 1896 + 0.469937
ycjJ b1296 putative amino acid/amine transport proteinchromosome CDS1355826 1440 - 0.531944
ycjK b1297 putative glutamine synthetase (EC 6.3.1.2)chromosome CDS1357514 1497 - 0.527054
ycjQ b1313 putative oxidoreductasechromosome CDS1372987 1053 + 0.557455
ydcR b1439 multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport systemchromosome CDS1508027 1407 + 0.513859
ydcS b1440 putative ABC transporter periplasmic binding proteinchromosome CDS1509678 1146 + 0.527923
ydcT b1441 putative ABC transporter ATP-binding proteinchromosome CDS1510841 1014 + 0.544379
ydcU b1442 putative ABC transporter permease proteinchromosome CDS1511855 942 + 0.529724
ydcV b1443 putative ABC transporter permease proteinchromosome CDS1512786 795 + 0.539623
yddG b1473 orf, hypothetical proteinchromosome CDS1544312 882 - 0.496599
yddO b1483 putative ABC transport system ATP-binding proteinchromosome CDS1555136 927 - 0.545847
yddP b1484 putative ABC transport system ATP-binding proteinchromosome CDS1556055 987 - 0.541033
yddQ b1485 putative ABC transport system permease proteinchromosome CDS1557038 897 - 0.530658
yddR b1486 putative ABC transport system permease proteinchromosome CDS1557931 1023 - 0.549365
yddS b1487 putative ABC transport system periplasmic binding proteinchromosome CDS1558955 1551 - 0.503546
ydeE b1534 putative transport proteinchromosome CDS1619356 1188 + 0.498316
ydfJ b1543 putative transport proteinchromosome CDS1629026 1284 - 0.469626
ydgD b1598 putative proteasechromosome CDS1669984 822 + 0.520681
ydgI b1605 putative arginine/ornithine antiporterchromosome CDS1677581 1383 + 0.535069
ydgR b1634 putative transport proteinchromosome CDS1710793 1503 + 0.516301
ydhC b1660 putative transport proteinchromosome CDS1737935 1212 + 0.533828
ydiB b1692 putative oxidoreductasechromosome CDS1771813 867 + 0.477509
ydiM b1690 putative transport system permease proteinchromosome CDS1769095 1215 + 0.449383
ydiN b1691 putative amino acid/amine transport proteinchromosome CDS1770530 1272 + 0.45283
ydjE b1769 putative transport proteinchromosome CDS1850645 1359 - 0.451067
ydjJ b1774 putative oxidoreductasechromosome CDS1855814 1044 - 0.467433
ydjK b1775 putative transport proteinchromosome CDS1856874 1380 - 0.492029
ydjL b1776 hypothetical zinc-type alcohol dehydrogenase-like proteinchromosome CDS1858280 1077 - 0.497679
yeaS b1798 orf, hypothetical proteinchromosome CDS1878145 639 - 0.452269
yeaU b1800 putative tartrate dehydrogenasechromosome CDS1879936 1086 + 0.536832
yebQ b1828 putative transport proteinchromosome CDS1908189 1485 + 0.514478
yebY b1839 orf, hypothetical proteinchromosome CDS1921389 342 - 0.459064
yecC b1917 putative ATP-binding component of a transport systemchromosome CDS1995086 753 - 0.543161
yecS b1918 putative transport system permease protein (former yecC)chromosome CDS1995835 669 - 0.527653
yedA b1959 putative transmembrane subunitchromosome CDS2027563 921 + 0.536373
yedO b1919 putative 1-aminocyclopropane-1-carboxylate deaminasechromosome CDS1996518 1083 - 0.528163
yedR b1963 orf, hypothetical proteinchromosome CDS2031143 384 - 0.497396
yeeF b2014 putative amino acid/amine transport proteinchromosome CDS2083728 1365 - 0.52674
yegB b2077 putative transport proteinchromosome CDS2159488 1416 + 0.555085
yegT b2098 putative nucleoside permease proteinchromosome CDS2176843 1278 + 0.502347
yehW b2128 putative transport system permease proteinchromosome CDS2213767 732 - 0.575137
yehX b2129 putative ATP-binding component of a transport systemchromosome CDS2214503 927 - 0.551241
yehY b2130 putative transport system permease proteinchromosome CDS2215422 1158 - 0.574266
yeiT b2146 putative oxidoreductasechromosome CDS2232055 1239 + 0.514931
yejA b2177 orf, hypothetical proteinchromosome CDS2270380 1821 + 0.511807
yfaV b2246 putative transport proteinchromosome CDS2356885 1329 - 0.524454
yfbJ b2258 putative transport/receptor proteinchromosome CDS2370632 669 + 0.511211
yfbQ b2290 putative aminotransferasechromosome CDS2405583 1218 + 0.504926
yfdU b2373 probable oxalyl-CoA decarboxylasechromosome CDS2488278 1695 - 0.466077
yfdZ b2379 putative aminotransferasechromosome CDS2495079 1239 - 0.549637
yfhB b2560 orf, hypothetical proteinchromosome CDS2695937 573 - 0.528796
yfiK b2578 orf, hypothetical proteinchromosome CDS2713445 588 + 0.511905
ygaZ b2682 orf, hypothetical proteinchromosome CDS2807639 738 + 0.528455
ygbN b2740 putative transport proteinchromosome CDS2863123 1365 + 0.517216
ygcS b2771 putative transport proteinchromosome CDS2894555 1410 - 0.531915
ygeD b2835 putative resistance proteinschromosome CDS2970691 1194 - 0.555276
ygeW b2870 putative carbamoyl transferasechromosome CDS3004284 1191 + 0.49958
ygeX b2871 putative diaminopropionate ammonia-lyasechromosome CDS3005532 1197 + 0.536341
ygeY b2872 putative deacetylasechromosome CDS3006786 1212 + 0.514852
ygfK b2878 putative oxidoreductase, Fe-S subunitchromosome CDS3014082 3099 + 0.522104
ygfT b2887 putative oxidoreductase, Fe-S subunitchromosome CDS3027034 1935 - 0.527649
yggP b4465 orf, hypothetical proteinchromosome CDS3074201 1278 - 0.50939
ygiC b3038 putative synthetase/amidasechromosome CDS3178443 1161 + 0.501292
ygiS b3020 putative transport periplasmic proteinchromosome CDS3164133 1608 - 0.52301
ygjG b3073 probable ornithine aminotransferasechromosome CDS3217405 1491 + 0.547284
ygjI b3078 putative oxidoreductasechromosome CDS3224256 1434 + 0.496513
ygjU b3089 putative transport proteinchromosome CDS3237966 1245 + 0.551807
ygjV b3090 orf, hypothetical proteinchromosome CDS3239215 552 - 0.496377
yhaO b3110 putative transport system permease proteinchromosome CDS3254701 1332 - 0.506006
yhbE b3184 orf, hypothetical proteinchromosome CDS3329792 966 - 0.530021
yhdW b3268 putative periplasmic binding transport proteinchromosome CDS3417171 918 + 0.493464
yhdX b3269 putative transport system permease proteinchromosome CDS3418156 1182 + 0.502538
yhdY b3270 putative transport system permease proteinchromosome CDS3419344 1107 + 0.523939
yhdZ b3271 putative ATP-binding component of a transport systemchromosome CDS3420458 759 + 0.470356
yhfC b3364 putative transportchromosome CDS3490590 1182 + 0.518613
yhfM b3370 putative amino acid/amine transport proteinchromosome CDS3497881 1389 + 0.542117
yhfX b3381 orf, hypothetical proteinchromosome CDS3507835 1164 - 0.545533
yhhK b3459 orf, hypothetical proteinchromosome CDS3596007 384 + 0.565104
yhhS b3473 putative transportchromosome CDS3608539 1260 - 0.560317
yhiP b3496 putative transport proteinchromosome CDS3638885 1470 + 0.518367
yhjE b3523 putative transport proteinchromosome CDS3672809 1323 + 0.556311
yhjV b3539 putative transporter proteinchromosome CDS3698586 1272 + 0.454403
yhjX b3547 putative resistance proteinchromosome CDS3708822 1209 - 0.511993
yicK b3659 two-module transport proteinchromosome CDS3834976 1185 + 0.460759
yicL b3660 putative permease transporterchromosome CDS3836271 924 + 0.487013
yidG b3675 orf, hypothetical proteinchromosome CDS3853631 363 - 0.504132
yidR b3689 orf, hypothetical proteinchromosome CDS3866085 1251 - 0.551559
yidY b3710 putative transport proteinchromosome CDS3889638 1176 + 0.530612
yieO b3754 putative transport protein (MFS family)chromosome CDS3937208 1428 - 0.490896
yifK b3795 putative amino acid/amine transport proteinchromosome CDS3978910 1386 + 0.534632
yigM b3827 orf, hypothetical proteinchromosome CDS4009099 900 + 0.555556
yihN b3874 putative resistance protein (transport)chromosome CDS4060270 1266 + 0.450237
yijE b3943 orf, hypothetical proteinchromosome CDS4134098 939 + 0.539936
yjcB b4060 orf, hypothetical proteinchromosome CDS4272783 351 - 0.535613
yjdE b4115 putative amino acid/amine transport protein, crypticchromosome CDS4333717 1338 - 0.537369
yjdL b4130 putative peptide transporterchromosome CDS4352977 1458 - 0.510974
yjeH b4141 putative transportchromosome CDS4367179 1257 - 0.522673
yjeK b4146 orf, hypothetical proteinchromosome CDS4372652 1029 - 0.526725
yjeM b4156 putative transportchromosome CDS4381820 1545 + 0.471845
yjfC b4186 putative synthetase/amidasechromosome CDS4411051 1164 + 0.52921
yjhB b4279 putative transport proteinchromosome CDS4502021 1278 + 0.36072
yjhE b4282 orf, hypothetical proteinchromosome CDS4504929 204 + 0.45098
yjhF b4296 putative transport system permeasechromosome CDS4518694 1350 - 0.49037
yjhG b4297 putative dehydratasechromosome CDS4520150 1968 - 0.545224
yjhH b4298 putative lyase/synthasechromosome CDS4522128 960 - 0.520833
yjiJ b4332 putative transport proteinchromosome CDS4559520 1179 - 0.535199
yjiM b4335 orf, hypothetical proteinchromosome CDS4562722 1173 - 0.535379
yjiO b4337 putative transport proteinchromosome CDS4565310 1233 - 0.537713
yjiR b4340 putative regulatorchromosome CDS4568185 1413 - 0.550602
yjiZ b4356 putative transport protein, cryptic, orf, joins former yjiZ and yjjLchromosome CDS4591384 1362 - 0.519824
yjjN b4358 putative oxidoreductasechromosome CDS4593998 1038 + 0.509634
yliB b0830 putative transport proteinchromosome CDS868634 1539 + 0.522417
yliC b0831 putative transport system permease proteinchromosome CDS870190 921 + 0.535288
yliD b0832 putative transport system permease proteinchromosome CDS871113 912 + 0.530702
ynaJ b1332 orf, hypothetical proteinchromosome CDS1395389 258 + 0.453488
yneH b1524 putative glutaminasechromosome CDS1610349 927 - 0.519957
ynfM b1596 putative transport proteinchromosome CDS1667723 1254 + 0.529506
ypdF b2385 putative peptidasechromosome CDS2503569 1086 - 0.56814
ypfE b2462 orf, hypothetical proteinchromosome CDS2573492 408 - 0.487745
yphC b2545 putative oxidoreductasechromosome CDS2672722 1095 - 0.542466
yqcE b2775 putative transport proteinchromosome CDS2898614 1278 + 0.49687
yqeA b2874 putative kinasechromosome CDS3009483 933 + 0.49089
yqeG b2845 putative transporter proteinchromosome CDS2983869 1230 + 0.444715
ytfF b4210 putative transmembrane subunitchromosome CDS4430114 975 - 0.554872