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# Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough

>DVU2069 DNA processing protein DprA, putative
MTRGADPGCADPVADGRCQKRPPRFDELDEAARAELWAVLALRHTEGLGA
RSHIRLIRHFGSAFAAVQRAPHLAGSGVRQQAALALASGRWRATAKAEWD
ALHACDCGILLWNDPRYPERLRSLPDAPALLYCTGDVALLDNPALGVVGS
RLCSRQGMRMAAQLARDLACAGVTIVSGMARGIDREAHLAGLQGVGGTVG
VLGTGIDIRYPYDNEDLFERMASEGLLVTEFAPGARPEPRHFPIRNRVIS
GLSLGVLVVEAATRSGSLITARLALEQGREVYAMPGPVSAQTSRGCHDLL
EEGAHAVGSAEDILVDLAPQLLGALRARAEAAGGVPPAAPRGDDSISTDV
PLSGGRAPVRAKVVPSGAGEEGGAPGHRGGPGPDASGPHASDSHTVSIGA
SGADMPDTEAQDAAMWGGHTLDGDAAGNGAAVPVDGPPGGIGRAKQDAGV
GRLMDRLRQHLARHDVPGDDTWRDDKRRQDTYAEDERAKLESPEETHRPS
LHDRRHVPPVRDGRGGQGIPPACIATQRNGPPVAEAACGGQSCATASPSR
FPFAPLGQTAPSDACPPVASAPVISGEEGATAVSSASLRATARGVHAVNP
DMPKEHGDPESRLLALLRDMGEAHVDDLCRALAMAPGDVSGTLLLLEVQG
VVRRLPGMRYASM
>DVUA0133 CRISPR-associated protein Cas4
MAFTEDDLLPISALQHLLYCERQCALIHIERVWEENLFTTDGRILHEKVD
AGEDCVRAGKRIARSVSLRSLQLGLSGVADVVEFGPDAGDVYPVEYKRGR
SKRANWDRIQLCAQAMALEEMLGVPVTEGALFYGKTRRREAVAFDAALRG
ETVRAAARLHQFVDARHTPPAHYEASRCDACSLINLCMPRLPGKTKVRKY
LAAMAEIDEETA
>DVU2004 ISDvu4, transposase
MTTGKKVARRKLSLLELASELDNVSKACRIMGYSRQQFYEIRRNYQTFGA
EGLVDRLPGPREPHPNRVDEATEDRILAYSLEFPTHGPVRVAQQLVLQGV
QVSSGGVRGVWSRNGMLTRHERLLRLERHVRDTGIALNDDQVRTLERFSP
EFRERHIETRCSGDLVAVDTFFVGTLKGVGKIYLQSAIDCHSRYAFGRLY
TSKLPVTAVHMLNESVLPFFEEHDTPVVTVLSDNGREFCGRPDRHPYELF
LQLENIEHRTTRVRRPQSNGFVERLHRTLLDEHFRIQGRKNWYESLDEMQ
ADLDAYLRHYNHERAHQGRNMSGRTPYQAFLDSRPEGQPKEDNEGHYAA
>DVU2623 hypothetical protein
MSGQRPSHLDPRTIMEALVNGANHDWRLDRSLTLPAILAIVTGIISAATL
GATLKTRIETIEARTAAFDSEMRDARATSLHVARIDARLEALQETMAALR
DDMRQLRKGMTGDGR
>DVU3309 endo/excinuclease amino terminal domain protein
MPNGKADEVWFVYLLRCADGTLYCGVTNNIERRLTQHHRGRGARYTRGRA
PFILLGHAPFPGRGEAQRVEYRIKRQPTDQKLACLATIGGDAFVAGALQS
APAEGITWNP
>DVU0556 ISDvu3, transposase OrfA
MKKGRFSEEQMVGILREADRSPVAQVAKKHGISEQTIYTWRQRFAGMSAD
DVKRLRLLEQENTRLKKILAERDLEIEVMKEIATKKW
>DVUA0082 site-specific recombinase, phage integrase family
MVSELPVEQYFTPPDKRRIAAVTEESSGGRISDILTASTGLSPTEQAIAA
HMVSLRRGSPGTVRVYLPTLLAFFRFAETPVTHIRVWHIEDWLNSLEQAA
YKPATIATKLACIKSFFGYLWKCGLLPLNPAAPVKGPKHIEGHHGDRVLL
AEEVQELLEHTRRHAPARDHLMCRLLFAAGARAAEAVSLRWGDLRRDVRG
RWYATVMGKGRKTRHLHIPKDLAADLLVWKGALYSIEPYQPAPGLDAVPL
FPNRRVLTQPITVKTAYRIVTRWGEAALGRKISPHWLRHTFATHSRLAGA
TLEQIRVALGHESIQTTIRYEHSPHLTEPAGEILERRGVGTKG
>DVU0990 endonuclease III, putative
MPLPSVQQRALQVLDLLRRRYPTPATHLVARNPWELLVATVLAAQCTDER
VNKVTPHLFALWPDPAALACATQEALEEVIHSTGFYRNKAKNLLGAARRV
TEVHGGEVPRTMDELVQLPGVARKTANVVLWGGFGVNEGIAVDTHVKRIV
HRMGLTKETDPVAVERDLMRLYPREAWGDVNHMLVWFGRHVCDARKPLCE
QCEMAGICAKVGVGKEDAPAAPRKGRKPGAVAAKSGRSGTRGRKTASTKD
AGEDAARAAASAGQAHETGTKPVRGRRGKSGGGDA
>DVU1757 site-specific recombinase, phage integrase family
MASQRSSTKYPGVYERLVIHRVSGKQDIAFDIAYRHGGKKVWETIGRKSE
GVNAAYAARVRAERVKEVEAGRFIARDEMPVFRDALERYLTVHAKGKSSE
SHMRGYFEHHIAPLFGDAKMDRIKPIHIEELKRSMAEKGRSPQTIRHAIA
LVRQVYRKCVAWGIYTGTSPTDGVEMPKVDAARLRFLTEAEAASLLHALH
RRSRQWHDIAYLSLYTGMRLGEVLGLQVGHVNVADGVIDVMDAKAGTRAA
YMTAGVKEILAARCAGRDAKEFVFVQRGGGRVRYISSVFSRVADELFNDG
VTDARHKVVFHTLRHTFGSWLAQRGVPLYTIAVLMGHSSLEMTKRYSKLS
PDTKHDAMALLPELPTSPADDAC
>DVU3088 ATP-dependent RNA helicase, DEAD/DEAH box family
MTQEPNMPEDAVAPEEDRAARVAAEITGIDEPEDALPSVQFADLAPRLQE
ACIRAGWQSLMPVQAHALPYLFDGRDLMVQSRTGSGKTGAFLLPLLERLD
PAEASTQALVLVPTRELALQVEHEARTLFEGTGLRVAAVYGGVGYGKQND
ALREGAHFVVGTPGRVLDHLLRRTMQLDRLRALTFDEADRMLSIGFYPDM
KEIQRYLPKRRIATCLFSATYPPHVLNLAGEFLREPQMLSLSHSQVHVAQ
TQHMFCESKPMDKDRALIRLLEIENPSSAIIFCNTKANVHYITAVLQGFG
YNADELSADLSQSKREQVLERLRNNEVRFLVATDVAARGIDIPALSHVIL
YEPPEDRESYIHRAGRTGRAGAVGTVISLVDIMQKLELQRIARHYRMDIA
HRPTPQDEDVARVVGDRLTALLEGAYRQCTGLQRERIQRFTDVARTLAAD
EEQVVLLAMLLDEKYQQSLHAMPPRPRPQRASASRAVDSESDTAPRRRSR
GRRDDEGSTGGDERKTAPRTAPSRTTAGAEGASAHEDTGAGNMQTAQDGD
EQRTPRKRRRPRRRKPTGGDNGTSHDA
>DVU0236 site-specific recombinase, phage integrase family
MANNSRHIKTKHKGVFYRESVSRTLRGKPDRCYSIWYQDAQGKGHWKRIG
WASEGVTPESALLERMEICRDVGRGLPIADAESFTVGDAVEHYMRMAKAE
KKTSADKARAHYDKHLGPLLHALPLVAVTSTMLTEITGRLLDHLSEQSVV
HLVAFARRAVYRAIRDQRYRGANPFSSRRESAYRMPAVDSARERFFTPEE
ATTLLATLQRSSRPLYAMSLLSLRTGLRVTEIFGLTGQSLSPATGFINFT
DKQHKRARVHADGDIFEMLAEFVGAPGELLFPTADGRRQRRVSSTFSRTV
ERLGLNAGITDDRQRITFHTWRHTFASWLAQSGQVTLQELMGLMRHKTLS
MTLRYAHLIPSQQREKLSIVGQALANASNN
>DVU0718 ISDvu2, transposase OrfA
MSRQSAKEISTVEVVTMVQRRRWTIAEKLRVVEESSLPGMSVSFVARKYG
IAPNLVFRWRKLMSDGGKVAIQADDRVVSVAEAKALKKRIRDLERLLGRK
TMEVEILKEAIDIAREKKLISRSPLPFEDGSL
>DVU2010 ISD1, transposase OrfB
MADFIHSEHGLSERRSCAALGLSRTVYRYELKPRDDSPIIEALLGLADRY
PRYGFGKLFAVLRRHGFRWNHKRVYRVYCLLKMNLRRKGKKRLPSRNPQP
LAVPPCANVCWSIDFMHDALASGQRFRTFNVLDDFSRECLAIEVDTNLPA
ARVLRVLDRIVAWRGLPAKLRMDNGPELISVLLADWAEKNGVALEFIQPG
KPTQNSYIERFNKTYREEVLDFYLFKSLTEVKEITENWLRQYNEERPHES
LGDLTPAEFLLKNSPKEVSTFGWH
>DVU1398 ISDvu2, transposase OrfB
MKRVADSLQVSRSRLAERLDGPHRTRKPRYVKAQDEELLRLIRAILDERQ
TYGYRRIQACLNAHLRATGQSEVNHKRVYRIMRMNGLLLTRHNGKRPDKA
HEGKIVTLHRNTRWCSDGFEIPCDNREVVRVAFVLDSCDREVISYVATTR
GISGSMVRDLMLESVERRFGNAHTSHTVEWLSDNGSCYTAKETVEFASWL
GLRSCFTPVRSPESNGMAEAFVKTFKRDYVDCNICPDAPSVLKRLSEWFE
DYNENAPHKGLRMRSPRQFIRLSATAGCPV
>DVU2197 site-specific recombinase, phage integrase family
MTPQLASALRADAVRLSKQVVRANMTVGDAWTLYCRDWLASKSSYKTDRS
LYLKHIEPVIGSRRMDEVKTVDINELLRRMGDLSPQTRVHAVGLVKRLYR
RMAGWGVYHGPTPTDGVVVKRVDNARMRFLSPKEARWLLEELDCRSPQFA
DVCRVSLFAGLRLREIFSLKVQHVNIDARVIAVMDAKSGSRMASMTEDLA
RVLARYVVGRRPEEFVFTKASGEGMRTINQTFVRVVRDLELNDGVDDARH
KVVFHTLRHTFASWLVQRGVPLYTVADLMGHSVVEMTRRYAKLAPDTRRE
AVNQLDGIL
>DVU0562 ISD1, transposase OrfA
MKKSRFSESQIIRILKEADGGRKVVDICRENGVSQATYYQWKAKFGGMEA
SDIRRLKELEEENSKLKRMFANLSLENEALKDVIAKKL
>DVU2973 integration host factor, beta subunit
MNKSELVKMLAENHEIPAEESSVIVNLFFDSVRDALLQGDRVEIRGFGSF
KVKGYRGYKGRNPKTGDNVEVPPKRLPVFRAGKELKEIINP
>DVU0192 adenine specific DNA methyltransferase, putative
MENLNIENWPVDRLHHSEHATRRNEDAIPRMVDALRMFGFRIPLLVTGAG
EVVDGHLRLKAALVMGMASVPVIVVDDMTPTQVRTFRLLINRSATWAEWD
DEALRVELASLRDYGVDVTMTGFADAELDAFLQGVSLAGESDPDMVPPLP
ETPTSRPGDVWNMGGHRLLCGDSTSVEDVVRLMAGEQADMLWTDPPYNVD
YSGKAGKIRNDKMSPEDFDAFLLRLLSRSYEALADGAAAYVAHSEAGGGT
AFRKAFAHAGYKLASCLIWRKHQLVLGRGDYHWQHEPILYGWKPTGKHRW
YGNRKHTTLLEHFAGQTVLPAGEGVWQVATGDAVLLIRGQDVTVEEVSTS
ILAVAKPARSELHPTMKPVALVERMVANSSPRGGLVLDPCGGSGTTLIAC
ERMGRRCNTMELDPRFADVIVRRWEEVTGKTAVLEGGASFADVPLAREVA
HA
>DVU0479 serine/threonine protein kinase, putative
MKIGRYEVCGLLGRGGMGVVYKVRQPVTGRVAALKLLKPADILVDLAGMD
ALREGFLHEATVMASLDHPHVAAVWDVDEAGGLPFFVMEYYCLNLGLLMG
ESYRVEAPTRRLPLERAVRYARQTLEALRRMHHEGIVHRDVKPFNIMVTG
DDAVKLIDFGLSRLRGETRLSPRGVKVGSPYYAPPEQESAPDAVDARADL
YPVGVMLFRMLTGVLPTDEERMKDGRIPRASALSDELDEGWDAFFDTAMA
ADPARRFPDAASMLAALARCEAAWRKQVEATCRLIPEQAAGPGDASDMRH
DAGHESVQAGQTDETGQAGQAGQAGQAVTCEGAPAASGGVRCRPVKVGVH
EARATFALDALWRPASAARQGLEARDDGTVSHAATGLQWETGGCDFPLTR
DEAEAYVEARNALRFAGHDDWRLPTVDELLTLVDAGVTVGDPCVASVFAP
LPDPLWTSDRKSYMASWFVSAAMGFVGWQDDTCRFGVRLVRGGSARCRE
>DVU2459 hypothetical protein
MLDSQWRTAPPEKGEFLAFSLRLDTRRIPAAVIKKYTALSLRDEEERNKQ
QGKKFISRERKKELKEQVKLRLLSRFLPIPAEFNVVWATTSNMVYFASTQ
SKMCDLFMEYFTLTFDLHLEAMTPYQLAASMLDENAMSRLDIIEATQFA
>DVU0070 Ser/Thr protein phosphatase family protein
MRPITFVHAADLHLDAASGGLGADMPPAFAERLHSATFVALDRLVALCLA
EQADFLVLAGDVYNHEDGSLRAQIALRDACARLDAAGIPVFIAHGNHDPL
SSRIASLVMPSGTVVFGEDVSVHPVVRDGETIALVHGISHASTRETRNLA
RRFARTADACPQVGVLHCTIGTADGEQRYAPCTVEDLASTGLDYWALGHI
HLRQVLCETPRVVYPGSTQGLHIGEEGDHGCTLVRVDAAGGIVLEERPLG
PIRWQAVRVDIGPQPAMRTMESKGRPPTDTPRQATAATSAYDAPLADVDG
LVARTVRAIEEAAAEAHAGCTGMVIRLVFEGRGPLDRLLRRPTDASDLLD
LLRGEVADLTPPCWVKDMEVHTRPDVDMDAMLRRDDLLGATLRNATEALQ
SPDGMSGARTALAALYEHHAARKALPPLDEATLAALIADAGTLCLDLLES
D
>DVUA0132 CRISPR-associated protein, TM1801 family
MTAIANRYEFVLLFDVENGNPNGDPDAGNMPRIDPETGHGLVTDVCLKRK
IRNHVALTKEGAERFNIYIQEKAILNETHERAYTACDLKPEPKKLPKKVE
DAKRVTDWMCTNFYDIRTFGAVMTTEVNCGQVRGPVQMAFARSVEPVVPQ
EVSITRMAVTTKAEAEKQQGDNRTMGRKHIVPYGLYVAHGFISAPLAEKT
GFSDEDLTLFWDALVNMFEHDRSAARGLMSSRKLIVFKHQNRLGNAPAHK
LFDLVKVSRAEGSSGPARSFADYAVTVGQAPEGVEVKEML
>DVUA0019 type II DNA modification methyltransferase, putative
MDALASQGDVETRGAIFTREEVVDFILDLVGYNDDQNLFMKRILEPSFGG
GDFIFRIMERLFRSWRSTKPSENVVDVLGDAIRGFEIHRDTFLATHRAVM
SRIENEGFSSSTAKCLADRWLSNDDFLLAPHCGKFEFVVGNPPYVRQELI
PNLLLKEYRTRYHTMYDRADIYIPFIEHSLSLLTRKGSLGFICSDRWMKN
RYGTLLRKLIADRFNLKFYVDMVGTQAFQSSVVAYPAITVISREKQVATR
VAQRPCISRAELRSLASELTAKRLLKESVYHVRELSHITKGGEPWLFESA
DKTALVRRLERSYPTLEEAGCKVGIGVATGADKSFIGRFDDLDVEPDRKL
PLVMTQDIASGEVKWRGLGLVNPFNDSGTLVNLQKYPRLSRYLQERKEVL
VRRHCAQKNPTKWYKTIDKIVPSLASQEKLLIPDIKGNAHVVYEQGSLYP
HHNLYYVISCTWDIRALQAVLLSGVAKLFVEVYSTKMRGGFLRFQAQYLR
RIRIPFWEDVSLGLREELIVAAKSRNLEACNAAAYRLYALTGEERAAIEG
LG
>DVU2213 nuclease domain protein
MHDAPVASRGTADKGQHNGYRRPCALAHVCVFVTLTVSFLLAHALPHKAW
SNIQTPAQEASANVQTRAASPPTDLHAGTPDTPSASASYAEAKPATTDRK
RRHPAIAPDSAYPHGIPDTPVEAIVLRIADGDTIIVDIPGYPPIIGHRIA
VRVAGCDTPESNDPRQEMRTLARRATFRTREMAPPGCTVRLHNLKRDKYF
RLLADVETPVGDLGTHLIGEGLARPYSGGRKTW
>DVU1140 bacteriophage transposase A protein, putative
MKTNKDAYTTRELAELLSLSRQGMEWRAKREGWTSRKRPGRGGGNEWLVS
SMPEDTVLAIQAAEVRNAIATPAAASPAVTAHDVASVVAIDPKRRQKALA
RADLVREYTHWLRRHGTSARSRADFMAAYEGGAWPELLQQIGPTSWKTLE
RWKVQQRRAGDVLAIADKRGIAHRGRSLLTERHRQIILGLALNINNPAIS
YVCNEAVARCRAEGLHIPAPATIRRFVGQYMQECYAEWTFIREGKKAWND
KAAIYFERNWGLVEVGDILIADGHVLNFESVHPETGKPCRMTLLLWFDGA
SSYPLGWEVMPTENTACISSALRRACLRLGKIPRIAYLDNGKAFRAKHFK
GCADFRQAGIVGLYEDLGIQVIHAWAYHGQSKPIERFFGTFHELENWVPS
YTGRSIDTKPARMHRGEVTHRKLYAAMGGRPLTLEETHAAIAHFFDTYVR
RPARGHLKGRTPQEVFAAGRGPGLDGEEMTRLNMWMLEREVREIDRGGTV
RLMGRRYFAPELYGKKHPAIIRYDAQRPQSVLVYATDGRFIAEAKEMQTL
HPAAYYLGDESDQQALADALTIRREQEHLAGGTARALLETVVKPETRQRM
ERLTVSARAPEALPESCPAPVITDEERHAHEAMLAEHKAAMAARPAYDAP
TFFGSALERYEYLFQVSEVQGLPLTPADAAFKRDYEQTPEYLEVALPRYE
QQRRLNARLAAMEEAHA
>DVU1787 nuclease domain protein
MLCAQVEAQNLVVSGATFLDGDTFVYNRASKVRLAGIDTPEIGHDGAPDQ
YYAEASRKIAAEIAGKATLVLVPVGAGKDRHGRGLCDVRLPDGRSLNEVL
VEKGSAYVYYHDDVPQALQARLLAAQRRAMDARAGFWKVVLESFPAGEYV
GNRNSHRFFSPGCAEGRRVASRNRVYFSTAEDAFRAGFSPARPCNIWPAV
RNVRTGGV
>DVU2030 ISDvu2, transposase OrfB
MKRVADSLQVSRSRLAERLDGPHRTRKPRYVKAQDEELLRLIRAILDERQ
TYGYRRIQACLNAHLRATGQSEVNHKRVYRIMRMNGLLLTRHNGKRPDKA
HEGKIVTLHRNTRWCSDGFEIPCDNREVVRVAFVLDSCDREVISYVATTR
GISGSMVRDLMLESVERRFGNAHTSHTVEWLSDNGSCYTAKETVEFASWL
GLRSCFTPVRSPESNGMAEAFVKTFKRDYVDCNICPDAPSVLKRLSEWFE
DYNENAPHKGLRMRSPRQFIRLSATAGCPV
>DVU2688 bacteriophage transposase A protein
MPRATREAIADGLLRTSAPASLPATSAPAETRPALPPIDPADPRRGIVAR
MASLSGYTQRQREVAFARLAFIREIERLSVLTGVEAAINKLVQDAGDGAL
PPHLMDLVRAANDRYGDGGKRGLSRRRLYAWRAGYLAMGEEALVPKHATP
DLSVPPWADAFMTLFQRPQKPSIARAHRDLCKAYATGELGELAGPPPSIH
AVRRWVAKVARPDLERGRKTGNALLKMQPHQRRSTAHMLPGDCYTADGTT
FDAEIRDPYNGKPMKPEITLVLDVATRRCVGVSLNYAENAQGVLDALRMA
CLYGGVPAMFYSDNGPGYDNRLLNAPGTGMLARLGIERRASIPGRPQGKG
LMERAVKTICEPVAKAMPTCSHRDMDGDAAKKVYKITRADLKRGGRSPLL
PTWEQFKTAMLERIVEYNTTPHRSLPVITDENGRRRHMSPDDAWKYHEDN
GWRPVSVPADISHEEFMPAERRIVRTGEVRFGGGVYFSHDLAPYHGDAVM
VRYDVWDASRVYVWTMDGRRICEAVLDANSTPYFQQSQIDAAREKREQAQ
LKRLERKAAAIAPGSFLTVATGRTRETPLMADSLAPRDQLPAQETAAAPV
TVDVTPLRPQTTEPERRPCFAHAHERYEWLMHHKDRWLDKDEPWLRRHVD
TIDYADNHERYVHEGIAWPGWKAETDSEKD
>DVU2011 ISD1, transposase OrfA
MKKSRFSESQIIRILKEADGGRKVVDICRENGVSQATYYQWKAKFGGMEA
SDIRRLKELEEENSKLKRMFANLSLENEALKDVIAKKL
>DVUA0004 DNA-binding protein HU, putative
MEKTSKPQLVAYLRERAHLTEEQALMTLKALYLFSLEHLEKGVGVVLPDI
GQIKPSMGKGGVGRNFRTGEATVIEPKLKLTFSASKALKEPLDAAQRKAA
KQRDAKSQDGATGDGRA
>DVU2024 conserved hypothetical protein
MIERLELRNLTVFTGLTLELSPKINVIIGENGTGKTHLLKAAYGLCAGAP
LFKNKPDTGDDELEAALTAKLLRLFMPLDDKLGKMHRQGATDQAYLSAKF
AGGQKIAATFFNNSKALAVQDRANYEKYQAEAVFIPTKEVLSFMKGFNSL
YEKYGLSFDQTYQDICLLLDLPEVRPETLHEKSKWAMAEIEGICGGRFVF
YGGGKVTFKTENAEYSANSMAEGFRKAGILSRLLETGAIQPGVSGPLFWD
EPESNLNPKLMKLLVQILLELSRNGQQIILATHDYVLLKWFDLLMDKGKD
DHVRFHSLYRDADTSEIKVASTEDYLKITPNPIDEAFGFLINQEIENDMG
GLGK
>DVU0191 conserved hypothetical protein
MRAPLLERLAARGLQPRKVSTGRGDRGEEYASPCPVCGGRDRFRIWPEQP
GGPACAKAGVVGTWFCRQEQKGGDVLEYLLTVERLEWAEACKELGIERTT
FVPGRLPAMPKAIRKASFQPKPSALPGDIWSARAGKFVADAHAALLRTPR
ALAYLAERGLPEAAVRRYRLGYLAGEQGRQGVFRARSAWGLQPKEGKDGK
PRTSMFIPRGIIIPAYGPAGQDGAPVRIRIRRPDGDVEQWGDKYMLVEGG
CGRTTMLLGEAPRAVVVVEAELDAMLVRHAAGDLVGALAVLTNRGRPDAT
AHTALQSAASILVALDYDGPGADGWAWWRETYPQAKRWPVPAGKDPGDAF
KQGEDLRAWILAGLPPVLAMEHAKARGAEQLSSVEQAPTASSAPAVAPCA
TAPAPIPSPAAAAASAPASSCGLQPDVMQTVLAFRTLWEGMPVKYVRFNS
GGYEWQYPAPWGKRHMARLHELLRRFDATPTLWDYFAEHPARIITPDNLL
CRARRSNANRPHQNDAACC
>DVU1864 DNA-binding protein HU, beta subunit, putative
MNKSELIRTLSEETNIPIEEATIVVNTFIDNMKDSLLAGDRVEIRGFGSF
KIKDYGGYSGRNPKTGKMVDVEPKRLPFFRAGKELKEFLNEQQ
>DVU1130 DNA-binding protein
MATLIDDVVKLVAGGWRPYRGDVDASVYDALECPRLPIPGRNAPKSGGPY
WFHRADVFLCLGCGRRCSLNRPNGFQPPLPVRYPVSKERPFTLTPQEMVT
RLRLLNVHQAAYCLNVSPGQIYNWIAEGRLRRLKEAPVRVPSEDVRAMME
NWEE
>DVU2017 ISDvu5, transposase
MEANDLLTLGLGLTAPWRVVDQSLDLSKQPSELRLEVEAARGERYPCPAC
GALCKAHDFAEFSWRHLNFFQHHCLIKARVPRVRCPEHGLKRVNVPWARP
GSGFTLLFEQAVMLLAREMPVNAVARYVGVTDKRIWRVVTHYVLKGMGKL
DLSRLCGIGLDETATKRGHHYVTIFVDMDRESRPVVFATPGKGKECLKTF
AAYLKGRQGNPENVVEVVCDMSPAFLSAAEATFRNAAVTVDWFHVVQIFT
KALDEVRRLEAREVILPKAARWAVLKGLETWRIEEQVAALKELEERGLAT
ATAFRVKELLRWVRKADTRQGARWRATRFFEFARELAGDSVLLAPVRKAL
NTFEDHLPRILRRWDSLLSNARLEGLNGLFQAARSRARGYRNVTTFITMI
YLIGAPITQLLEA
>DVU2062 ATP-dependent DNA helicase, UvrD/REP family
MIENPQLLQIKASAGSGKTYTLTRRFLELLGTAQQDGSTGPACTLSADGR
HCWPEILAATFTNRAATEMKERVVRRLKEMALRTGESPEAPWTPALADRW
VGTILRQYGALNIRTIDSLLTLLVRLSALDLRLPPDFEPAFAGPDFFEPL
LDDVLETARHDDPALRDMLRRACETLIHHTDHKGFATGEKLRARLLELLE
WHLCNGDLPTTDADAVRARLVTLHERARQGATTLTRVTADENLAVAANFL
KFLVKVEESSPFAKVPESAYLHKTNLDECLNKASRGNASAQAESAFSAFM
AALAAFRTRGRLLQRALAIMPLVGIAETLARRLPDYQLREGKVPAQLLPQ
MARRVLDGEYGVSEAFCRMGTRLAHILVDEFQDTSKDQWAAIQPLAVECL
SRGGSLTWVGDVKQAIYGWRGGDSALFDAVLRDGELLAIAGDGISGTLPR
NWRSRPEIVHFNNDVFALLGDEAHATAVLRAMLPEGTPPDVFSEAVDELA
RAFTGAAQETPPRGDDETQEEGFVRLTHVAAFDSEELDAEVKTALRSLFM
GDLALRRRWRDVAVLVRTNGEAGRVATWLMEWDIPVVTENSLRLADHPLI
SQTVALLGFLDYPRDDLAFWEFAAGPELLGDAAGLDAPAMDDWLAEGGRG
PLFTRFRDAFPAVWRRWIAPFYSRAGLMSVYDTVREVYTRFRVFDRYPED
AGFLRRFLEVVHAAEGQGLVSLSTFLDFWKRTGGDEKVPMPEGMDAVRVM
TMHKAKGLEFPVVVIPFHHQADRADDTPVRMEVEGLDLLVPRCPEMGKPY
YEAFAASVREQLHVLYVAWTRPVEELHAFITERKTGKGRSALLEGLKVLL
GLCGVPETWGTWERGTIPASALADSAAEPAPERRPDQPESTPHTTASPAR
ADSAPADTTPVVQEPAVQTVPPPQPAASACASETAPQATGHDTPSLMVDA
AASIPAPASTPDDDWRPMQWLPRLKIFRNQLEEFTFTERRRGMLVHACLE
ALHPTGAPREDAARAVRHGIRAFPLPVPDEDAVAAELTTMLEWYAAQPET
AHWLRHGTPEQGILDAQGRLHRTDLFVDDGNVRVVVEYKTGAPSPDHIEQ
VHRYLSLLLDADPRPVHGVLVYLDRRTTQRIDPAESGDTSNTIAHPAEAR
RP
>DVU0483 DNA mismatch repair protein MutL, putative
MQPESTHQARRVIQVLPPELRNQIAAGEVVERPASVVKELVENSLDAGAT
AIEVVLEDGGQSYIMVRDDGYGIPADELELAVTRHATSKVTNLAELARIM
SFGFRGEALPSIASVSRFAMTSAHAKAEGGTVATRIEVEHGRVLASGPAA
LHRGTIVEVRELFANIPARLKFMKTQATETKRCQELFARIALARPDIAFT
LSAGRRELLRFPAGQTLRQRLGTLWPPAVVETLYAFDRSTGTVRVHGLAA
DPRGAQPRPDRLLLYVNGRAVNDRLLLKAVREAYKGRLLAREYPQVVLFL
DIDPEEVDVNVHPAKNEVRFRDEREVFVAVLRAVGDAVEASAQGIPDETE
PGTDPFAAPLRPVPPAAPHARPLGFWGEADRASVLQPSGKRRPDETGHVE
TVLVETMGGEAASPSHTVPGTDAPSPRTPDDVPRADVHPRMDVPPMAASS
GDGTRPVRALHMAEHAAYDTGVSGFKAGTPDSMAPRNGHASWGDATDRTL
TGNAGAANDRTDDNGTAYRNAPFTDCPPGMIAPSGTAEARQTSPADTAPP
QTYDEGLEGGVRVGDHLYLGQIADTYLVLRHGNDQLVLVDQHAAHERVLH
ARLRRGGMAGGGQLLALPIELPLHPAELERLRLLDDDLRALGFECSTSGQ
TLSVRAMPPVLDRAGATSFLREALAGRRENLDDLWAMMACKAAIKAGQRL
TPDEAAGLLAQWLATPEHDFCPHGRPAVLRFNPGELERMFKRRT
>DVU3310 ATP-dependent RNA helicase, DEAD/DEAH family
MESVESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQ
TGTGKTAAFGLPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKHL
RGVRILSVYGGQPIEPQASALRRGAQVVVGTPGRILDHINRGTLQLGVVR
MTVLDEADEMLDMGFREDIERILSEMPEWVQSAFFSATMPDGILELARRF
LREPELLRVTRRQLTVANTEQAWFEVRPFRRVDAVCRIFDAYIPRKAIVF
RATKQGVDELAAALQQRGILADALHGDLNQTQRERVMSRFRAGGISVLVA
TDVAARGLDVDDVDTVINFDLPNDPETYVHRIGRTGRAGRTGRAFSFAAG
RDVYKLRDIQRVTGSRIDRRAMPTAADASRARTGQLLEEVAAGLASAETS
ACLPVVEKLIAEGADPTQLAATLLRMIMQRDRIDLPGARQTDDIGTGRVR
LFFNVGRRMRITPRDLVGAIAGETGISGRSIGSIEIHDRFSFVEVDASIA
PEVVSVMHGNQIRGFRLAVEQASPREGQDRAA
>DVU0895 helicase, RecD/TraA family
MQTGKTATTEEQTAEALEELEGTLERVIFHNAENGYTVFRFQPKGKGGDA
VSVVGHMVDPQPGVGLLLRGGWVNNPKFGRQFRMETFESVLPATVEGIRH
YLGSGLIKGVGETMAARIVARFGESTFSVLDDAPDRLIEVEGVGAKTLER
IKTSWAEHRGIRDLIMFLQPHGVSTAYAVRIYRYYGTHALTVVRENPYRL
AMDIHGIGFITADGVATKLGFSKDSPLRAEAGVLYMLGRLTEDGHVYFPF
DGLVTHTGDKLDIRYDLVEDAIHSLEREERVVLEDLGEGVGVFLTRFHHY
ETKIAYYLRRVLASPKAVHFENPDAVVDKVLGKLDIALAPEQLEAVRTST
RSKVMVLTGGPGTGKTTIINAIIRVFAEVGARILLAAPTGRAAKRMSETS
GRESRTIHRLLEFSPKEDGFARNEDNPLACGLLVVDEASMMDTMLMYHLL
KAVPLGATLLFVGDVHQLPSVGPGNVLRDVIVSGVVPVVELREVFRQAAE
SEIICNAHRINQGEVPPLESSRDRLSDFYFIRQSDPAKVVEMILELVRDH
IPRRFGLHPVDDIQVLTPMHKGLAGAGNLNLRLQEALNPQTLCVQRGERQ
FRLDDKVMQIRNNYEKDVYNGDIGRICCVNAKERELTVRYDERNVIYAWE
ELDEIVPAYAISVHKSQGSEYPAVVIPVLTQHYVLLQRNLIYTGVTRGKR
LVVLVGESRALAMAVKNNRMQKRHTWLAHRLAQGLSTPGALL
>DVU0156 ATP-dependent DNA helicase, UvrD/REP family
MIEFAKELNAAQYEAVTTLDGPVLVIAGAGSGKTRTVVYRLANLLERGVP
ASSILLLTFTRKAANEMLQRASRLLGYGVQGIAGGTFHAFAYSLLRQYHP
ARLEGRDLTIMDGADSVAAIQHCKDALGIARGDKSFPKTQTVLSLLSKSR
NKELPLDEVLRREAYHLLVHADGVSRIGEAYAEYRAEHGLLDYDDLLFEV
ERLLRERPDLLAHLRDRYRYIMVDEYQDTNLVQARLVQLLAGEGGNVMAV
GDDAQSIYAFRGANVQNILSFPQFFPGTRIIKLEENYRSTQPVLDLTNAI
LAEAPQAYRKHLYTSREDGVLPQVVRPLSDLTQASIVVSRVSELLRTYPP
HEIAVLFRAGFHSYHVEVQLNKLGIRFRKYGGVRYSEAAHVKDVMAYARL
VLNPLDLPAFQRVAALSRGVGPKTTLRLYEVARQGDPAATAHACARYPQL
RADLELLDRLRKRTPAPATLLEEVIEHYQPRLEAAYPDDWPRRQQGLEQL
VQIASAYRDLDLFISDLSLEDPGTEEEDRDSVVLSTIHSAKGLEWSAVII
LDLVEDRFPSRHAVTRADDFEEERRLMYVACTRARERLMLFVPSSLYQRG
EGGNQPAAPSPFVRELPAALYEEWYESYTGGLQRRDTSRPVARPAVASTF
GCAPRPESAPVPGGPSPVAGAAKLGFCTHKIFGRGKIVQHLPPDKYRVNF
PGVGLKVILGDYLTLEDDA
>DVU1478 hypothetical protein
MKRRTAELIRILQGRKMLTHMNIMIGNARHCLVNWISQNSSLCALRDLNF
EVSFPYCVQYAQALYILRYYPAYFAENYMLYTTLSEMGCRRPDIASIGCG
SMVDGAAASYVFDSFTYHGYDLNDWSFKGLTPNGGSVIFHNGDVFSETSW
DVERDVFCFSRSLRDIGDNIDGLRCAVESTDFKYDNIYICATYNSAPDEI
RRSHRGMLRRFASFFEDYDIINEDYWDSGRLSKRGRAIRSHLDWWVHSES
SFCSSLLSRCRDMLSDGCATSDCETNLQKKPILNVTELGFEVLHLLRR
>DVU2003 transposase, IS5 family, truncation
MQSVLIKGGFDRFVEKVCEPYYASGPGRKSIPPGRYFRMHLVGYFEGIES
ERGLEWRCSDSLSLRKFLRLSLTQRVPDHSSLSRIRQRLPLEVHQEVFGW
VLQALTKSGLVVGERLGIDASTMEANAAMRSIVRRDTGETYQQMLERIAK
DSGIKTPTREELARMDRKRKGKKLSNKDWKSEIDEDARITKMKDSRTHLA
YKPEHAVDLDTGAIVSADIHKADQGDTTTIGKTLESARKNLSDIGCTPIT
TAPTEVIADKGYHSREVVKELDGGVWRTRIAVPKANGLLNWKGDHEARRA
VYNNRARLKSAKGRELAKRRTELVERSFQHVLDRGGMRRTHLRGQENVHK
RYLLCVAGFNLGLLMRQLIGFGTPKGYFYLNSAQIFIIVWGRMVVSIILV
EMKSETGQEFVGTQIAVERC
>DVU2178 ISDvu2, transposase OrfB
MKRVADSLQVSRSRLAERLDGPHRTRKPRYVKAQDEELLRLIRAILDERQ
TYGYRRIQACLNAHLRATGQSEVNHKRVYRIMRMNGLLLTRHNGKRPDKA
HEGKIVTLHRNTRWCSDGFEIPCDNREVVRVAFVLDSCDREVISYVATTR
GISGSMVRDLMLESVERRFGNAHTSHTVEWLSDNGSCYTAKETVEFASWL
GLRSCFTPVRSPESNGMAEAFVKTFKRDYVDCNICPDAPSVLKRLSEWFE
DYNENAPHKGLRMRSPRQFIRLSATAGCPV
>DVU2085 Snf2 family protein
MHDTIPEYIRDGAQDMLAQGGVQKLGLKKEGGTWEIDGSIQSDDFQIYVS
RISLTPSEHRASYVCNCSDSFSGVCRHVAATALKMLSTFDTRPGSDEPAK
PRVEWRQSFRSFFSTALDPEPGKHYLIFRFHPEPGRLTVAFFRARQNKSG
LSTVHNEITLEQIINNPEWCELSPQLVDVAKQVGQFVDYYGHRIEIPDGL
VSWFFWAIRREYYLFWLDTESPCRIENTALGLKLHPRLGDDGLSFDVMLY
REGKPPFSILGGENAATFHGQMPMWVCWNRSFYPVQTSLPPQLVQDLIRQ
HPSIPQEDMSEFLDRVWTRLPSSDLYGQEDFLKLMEPVFQPARYSPKLFL
DEEGSLLTLEIQNVYETAHGEFYLAGPNPDFQTGSYTFEGTTFLIRRHQD
EEAGLITQLSEMRFQPRSSRLWFLEPEEAIAFLLDAYPRLVEKYRVYGEK
ALSRYKVRLSQPVITAKVESNEEEKWFSLDIDVEYDGQKVPIDKIWKAWS
QGKRYVQLKDGSYTSLPETWLERLGHKLQALGLDPDKPPQKQFKQFEAPV
LDSLLDDLPGAETDSFWNSLRDKIRTFREIRAVNAPRGLNATLRGYQMQG
LAYLNFLREYGFGGILADEMGLGKTVQTLSFVQHMVESGKIGPNLIVVPT
SVLPNWEREAQKFVPELKRLIIYGTRREGMFKLIDESDLVVTTYALLRRD
LEELQNHTFNCIILDEAQNIKNPNTITARSVRRIKADMRLCLSGTPIENN
LFELWSLFEFLMPGFLGSQHAFQRGVIKPIKDGDCETLDYLRTRVRPFIL
RRTKSEVAKDLPPKIENTYYCALAEEQAELYTALARKLKEQVLADVDEKG
LAKSQMSILDALLKLRQICCHPRLLKLDMPGFSTNLPSGKFDAFKDMITD
IVEEGHKVLVFSQFVQMLHIIRSWLQISGTPFCYLDGTSKDRFEQVDKFN
NSPDIPIFLISLKAGGTGLNLTSADYVIHYDPWWNPAVESQATDRTHRIG
QTRQVFSYKLICQNTVEEKILKLQDMKRGVAEAIIPGQETWKSLTREDLE
MLFDI
>DVU2179 ISDvu2, transposase OrfA
MSRQSAKEISTVEVVTMVQRRRWTIAEKLRVVEESSLPGMSVSFVARKYG
IAPNLVFRWRKLMSDGGKVAIQADDRVVSVAEAKALKKRIRDLERLLGRK
TMEVEILKEAIDIAREKKLISRSPLPFEDGSL
>DVU1527 site-specific recombinase, phage integrase family
MLTDIKARAAKPAEKVYRLYDGGGMYLEVPPSGNKRWRLKYRVNGKEKRL
SLGVYPNVGLKEAREKRDELRRLIAEGIDPAAQRCPQKVAPTADSFEMVA
REWMDLRSPAWAPRHLSTTCQRLEAYIFPHIGPLPIDQIGPLDVLNALRI
VEKRGAVEAARKTLSICSQVFRYAVASARIQSDPCRDLRGALKTRQPGHY
AAIVDPKDVGALMRAIDGYSGAMVVRCALRFLALTFVRPGELRAAEWNEF
DMERRIWTIPAHKMKKRREHIVPLSTQALAVLRDVRATAPRLNSPMVFQS
VRLRSDRGLSENTLLVALRSLGYGQGTMTAHGFRAMASSLLNGLGYNPDV
IERQLAHIEGNKIRAAYHRTEYLEERTAMMQAYADYLDSLRDSMPPR
>DVU0791 methylated-DNA--protein-cysteine methyltransferase, DNA-binding domain protein
MVDVLVAAPLRLELHWEQGVLAETVLGWAGEGEKPVLLTEEARSVQACLV
RYVAGEDVEWPSLPLAWDRVTPFRRRVLQALVADVPAGAVTTYGDLAARA
GSPDAARAVGGAMANNPWPLLIPCHRVLGGGGRLGGFSGAGLPMKRWLLD
HEGCADKGARC
>DVU2879 conserved hypothetical protein
MRAPLLERLAARGLQPRKVSTGRGDRGEEFASPCPVCGGRDRFRIWPEQP
GGPACAKAGVVGTWFCRQEQKGGDVLEYLLTVERLEWAEACKELGIERTT
FVPGRLPAMPKATRKACFQPKPSALPGDIWSAQAGKFVADAHAALLRTPR
ALAYLAERGLPEAAVRRYRIGYLAGEQGRQGVFRARSAWGLQPKEGKDGK
PRTSMFIPRGIIIPAYGPAGQDGAPVRIRIRRPDGDVEQWGDKYMLVEGG
CGRTTMLLGEAPRAVVVVEAELDAMLVHHAAGDLVGALAVLTNRGRPDAT
AHTALQSAASILVALDYDGPGADGWAWWRETYPQAKRWPVPAGKDPGDAF
KQGEDLRAWILAGLPPVLAMEHAKARGAAQLSSVEQAPTASSAPAVAPCA
TAPAPIPTPAAAAASSCGLPPDVLQTVLAFRSLWEGMPVKYVRFNSGGYE
WQYPAPWGKRHMARLHELLRRFDATPALWDYFAEHPARIITPDNLLCRAR
RSNANNANRPHQNDAACC
>DVU1686 ATPase, AAA family
MSVRQPLPERLRPTVLEGFVGQTHLTQRIEALLRANRLPSLLLFGPPGCG
KSTLALLLAKARSANVLRLSAPEAGLQHLRKQLHGVDILVLDELHRFSKA
QQDFFLPLLESGDITMLATTTENPSFSVTRQLLSRLHVLRLRPLGRAELL
ELGRRGAVAQEVQIEDDVLDLLASMSHGDARTMLNLLEYVAALPEDKRDI
EGVRSAMPEIVSRHDKDGDNHYELASALIKSIRGSDPDAALYYLACLLEG
GEDPRFVCRRLILSASEDVGLADPQALPLAVACMQAVEYVGMPEGFIPMA
QTTVHLALARKSNSTYAAYINAARELKTQGRKGVPLHLRNPSTRLQKEWG
YGKGYRYPHSYPEGWIEQEYLPEGLEDRRFYAPRENGEEPRLSAWWRKLQ
RQRPPRRGSGE
>DVU0453 ATP-dependent DNA helicase, UvrD/REP family
MRDDASGLYRLRDPRGLSDELPAFADRVKQSRCLFVPQAEISSIYKRGGK
VRKVHNIVYMPDFDAVDRLNRKLAEVGNLVSDGRPILGLDARDLLGMVLD
ADPRGVLVPAHIWTPWFAVFGSKSGFDTLDDCFGDLTGEIFALETGLSSD
PEMNWLWSHLDRFALISNSDAHSGDNLGREANLFEGEMSYDGIFRSLRGD
AVDCRFLGTLEFFPEEGKYHLDGHRACNVVYEPRETVARGGLCPVCGKPL
TVGVLHRVLELADRDTPEQVAGRQGFRSLIPLPEILGEILGVGAKSRKVA
DWTGRLVQRFGPELAILQDVSLDALRRYWEPLGEGIARMRRGEVLRQGGY
DGEYGVVRVFTERERASLRGGGGSKAALPLLDLGGAASAPAVHDTPGRRN
TGTKDAGAGGIISPAVAGADVATSAKASGGRAASASEAGGANASAETTTP
HDTTAVRQTSADGGGEGPGLASLFISARPAEPPVDFNPEQRSAIAGGPGP
VLVLAGPGTGKTRTLVGRVQRLVAEGVAARRIVAVTFTRRAATEMDERLS
VTLGDGAPLPRTDTLHALAFEFWHRSSAQPPVLLSEEAARRVFAEANPDA
TAQTLREAWDELAVCRERMQVCSLALAPLLDRYVQQKAAWNLADYTDLLE
FWLEQIHNGLYVPPWRHVLVDEIQDLSPLQLALVRALLPPGGEGFFGIGD
PDQSIYGFRGAHGDVKGALDEAWPGLSVVTLRANYRSSASVLDAAGALME
GRSACGRLRAVRDLPADIRLFEAPSAESEAAWIGDRIRSLIGSTAHTLVD
AAPEGALPGEGTFGPGDIAVLVRVRALIPVLQRTLSRLGVPVAAPETEAF
WADQRVSLILAAAGRFVGIGSAVAGGPGDEVNCPDKMLARGPLGVAAYLR
ESPPFDELFWQSAAFKALSKAYDTHGGWVGLINWVNLQSELETVRRRSEK
VQVMSLHAAKGLEFRAVFLPALEDGILPFAGAATLSGHADREHMRTDLEE
ERRLFYVGITRAAEGLYLSRASRRTLYGREVRLKASRFLDDVPVAGVKRS
ALVRHSKHSVKQLSLLGGGD
>DVU1082 3'-5' exonuclease domain protein
MMTNVPERYRRKISKEEINELPLRRYAGEVRLVRTEEELADALDVLRSDS
VLGFDTETRPTFRKGKVNLPSLVQLACADVVYLIQLNWVPLGEMLADLLS
DPAIIKTGVAVRDDIRDLQKLYAFRDGGVVDLGEVARDLGLETHGLRNLA
ANFLGIRISKGAQCSNWSNRELGPQQVVYAATDAWVSREIHISMRNLGLV
GL
>DVU1747 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein
MLNTASFQTRARAIDHLGRGQIADAPTAISELWKNAYDAYARGVELHIHS
GNVVVASICDNGHGMDAETLSSKWLVVGTESKVASPVPVEDRFGLPERAR
LGEKGIGRLSAAFLSPVTLVVSKRVGQPYAALLVDWRFFENPYLFINDVR
FPLVEFGELKEFPALFAQMFEELKANLQWGSASPHTAHLAAAWDRFDAIE
REQNPNAPTTREAILSLSPEGLIKWDHFSPWWQLMHKAVEGDDVHGTALF
TIGANTELACWVTDDEYESPDIQKVKETLTETLVSFVDPFEDTPIAFDYA
VVVHKPGKADFIPVSSEEVFDIQELRSLEHVIEGEFDTAGNFQGRITAFG
KDRGECFLPSPSVFTQRGKDSVGPFRFCLGTFEQDKKNTTHSDEEFEYHS
SQVNKYGGICIHRDGLRVMPYGREDGDLFRMEFRRSKHAGREFFVYRRSF
GRLAITSQHNPNLKDKAGREGLVVNKARREFERLVINLLMYVAREYFGTA
STIRNQELPGIQKARQRQMRAAETARKRNQKNFVRALKEKLPLALEASTR
AEAGADKLEQTLACKAYDDLPAIKMELDALQGLRDDLRIPNRPDELGSQE
EDYRRYRDAYALFCATIDKLKSMLARCEAEGLLGDPKRIATSKFYSNEAR
ISSQIGKALSTITSSLDALRTTWEENAREDRTAYRRKSTEFVSMLEAGQG
LTPVLDYLDKVHTELSDELNLKYDGIIHSLEQLVEGVDLEGAFFHVDEVN
RSLEEKVSMLNSVAQLGISVEIIGHELEALESQVTRYLKLMPKEVRALKS
YTLAFEAHRALVDRLRFLAPLRKTSYRSRIAISGKEIAKYVKEFFGTTFE
QCRIQFEVTPAFEGFSIRDLPSRIYPTFINLVNNALYWVQRGERRIIRLD
FVQGKAIVADSGPGVDEDDQKHLFELFFTKRTNGRGVGLYLCRENLAVAR
HSIRYATDNDPEVLEGANFIIEFHEVEHVSR
>DVU1504 terminase, small subunit
MAGRKPIPSNLKVLRGTDQKCRMNPHEARPNPEIPSAPRHLSREALMEWG
RITDELHRLGLLSNIDRAALAAYCQAYGRWSEAEAQIYADPDNPRLTTVT
ANGTTIQHPLVGIANSAALLMHKFLTEFGMTPSSRTRVAAAGNREKNKQG
FAALG
>DVU0112 deoxyribodipyrimidine photolyase, putative
MHPGRVWRHGDSRAVRGPVLYWMHREHRAHDNWALVHAIGEAKAAGAPLA
VVWCLSPRFLDAAYRQFHFLLRGMRGTAETLREHGIPFFLLQGDPADEVP
RFAATHGTGLVVTDFDVLRLKRAWLGQVREALACPLHEVDGRNVVPCRMA
SDKREYAARTLRPKIHRLLPEYLDPFPSLATEASGVAAWKAPVPDAMAAP
DWDALLAAHPADRSVPALTGPDAPVPGEEGARRTLETFLTSRIHRYEKRN
DPNADAVSGLSPYLHFGMMAAQRVVQRVTASTAGSADARASFIEELVVRR
ELADNFCLHTPDYDAVTCFPAWAQGTLDRHRDDPRPHLYDEAALEKARTA
DPLWNAGQTQLMRCGVIHGYMRMYWAKQLLLWTPTPEEAMRIAVRQNDRW
ALDGRDSNGYAGIAWSLGGVHDRPWGERPVQGTIRCMTYNGARGKFDVAA
YIARMESLRGGGQARLPKSPCQRQ
>DVU0563 ISD1, transposase OrfB
MADFIHSEHGLSERRSCAALGLSRTVYRYELKPRDDSLIIEALLGLADRY
PRYGFGKLFAVLRRHGFRWNHKRVYRVYCLLKMNLRRKGKKRLPSRNPQP
LAVPPCANVCWSIDFMHDALASGQRFRTFNVLDDFSRECLAIEVDTNLPA
ARVLRVLDRIVAWRGLPAKLRMDNGPELISVLLADWAEKNGVALEFIQPG
KPTQNSYIERFNKTYREEVLDFYLFKSLTEVKEITENWLRQYNEERPHES
LGDLTPAEFLLKNSPKEVSTFGWH
>DVU2172 hypothetical protein
MSIWTEEELLRHIGLYKTALEDLATAEQTTFEGITLRRSQLPEVRKQLQY
YEGELERLRGGHAIHVVNFGSVR
>DVU1746 C-5 cytosine-specific DNA methylase family protein
MKQHTPKHTPAKAVDLFCGAGGFSLAARNLGIEVVAALENNHYAAATYRH
NFIEGSRRPPLLFEGDILAISPEAFMQAANLTPGGVDIIMGGPPCQGFST
HRIKGAGIDDPRNTLLLRYFEYVQAIRPRYFLVENVPGLLWPRHEEYLQR
FYKLATEAGYHVSPPQVLNARDYGVPQNRKRVFILGTAGGHTLPDWPPRP
THFAPESSQVRAEGLPAWCTAAQVFATELANDDPNAIHLNHRPEMVEVFR
STPLNGGSRQQSCRVLPCHRNHNGHKDVYGRINPDAPGPTMTTACTNPSK
GRFLHPTQHHGITVRHAARFQTFPETFTFKGGIMAASAQVGNAVPIDLGM
AVIRPLLSALPACIARQSQ
>DVU0641 conserved hypothetical protein
MQEDTLTSRGNMPYSLNVLIPLSCDLRPPVPQAIHAGRVDHRELGFVHPV
SPGDVVAEVLVPAGEHFSPEVAQHLIGEGCALGDASTEHTEGQGVPVVAT
RSGHLDWDERALAVRDTLVVDEDVTYHVGNIRYFGDLIVRGMVRVAFRVR
ARSLLVEGLIEGAFIECERLEARGGVKAGGSGRLRVRETVAAPFMENAIV
HAGSHVVVSGSSLHNEIKSNASVQVAERLIGGMTAARDSITVGERLGGGM
STLTRVQVGYDPFLNTAVHRLEVQAQHVEEVMLSCAKLAGRGGRLGDKAK
ARGERYAAALKRLRRKLADLLARLDATSTLETCTIDVRGEVRPGVEICIG
PARLMNQDFLKNVRFSYCDGAVVATHPAGRTA
>DVU1479 conserved hypothetical protein
MTFKNDVDGCSYPGILSASRSTDIPAFYAEWFSRRLRDGYVVWKSPFNQK
CYSVCFEKAGGIVFWTKNPKPLMPFLDEVSELGYDYYFQFTVNDYESEGF
EPNVPPLDERIETFRSLSQKLGKERVIWRFDPICLTRELDVEGIMARLRS
IGECLKGYTEQLVISFVDVHAYTKVQRNIKTADGFCLREPSMEEQDELAR
RISSYAKEIGVSPSACGERRSFAHFGILPNKCIDGELFKRICRKGNIKLQ
KHLGTYIDQYSLLSPQKKDVTLCKDKGQRKECGCVESKDIGMYNTCNHMC
VYCYANTSQRVVEKNRVLHDVNGESLIPTSRTVEE
>DVU1899 DNA repair protein RecO, putative
MDFTDQALVLRVGRFREADLWVRFLCRQRGIISAFAFGGCRSRRRFCGCL
DIFNVVLMRVQGTRGGLYQSLQEATLLKGPDRLRRDWRRYGVAVNCLRFI
EALGAGPDGADSAFTLTLEMLELLETVDVVPPLLPLLFRARFAFEQGYAP
RFESCASCGEPFDGTAKDGGARFHVRDGVLYCGRCSAPTGATVAISRETL
DALRFVQDNSPLRWSELCFSPTGRRECSRAVDGFIQYHIGLTWENGTFRR
L
>DVU0443 exonulcease, putative
MHKARRVASRLLDGLTRLPLLHTPWSGEAERLRQPVHAATFVVLDLEMTG
LVPRRDAIIAVAGVTMRGERILAGRCFEAKMRPHLPPEEDAIAVHGLLPD
ETATHDDPAESLAAFRTFCGDSVPAGWHVGLDAAFLDAAAQRHGVRPWPR
RTLDVRGLHLALRHRLPARAAALATKDADLYAVARVFDIDVADAHDATGD
AWLTALVLQRLLVHGDCGHMTLGDLFHLAATGLHELNGATAMTF
>DVU2733 adenine specific DNA methyltransferase, putative
MYTTDEERVTLIQGEALTVLRTLPTGAVDTVLTDPPYSSGGITMAARQVD
PAQKYQQSNTKRTYPAMLGDNRDQRSFTLWATLWLSECWRVAKDGARIMV
FTDWRQLPAMTDALQAAGWMWRGVVTWHKPSARPSLGDFKRDAEYVITGS
KGKPTMHTRTCPPGVYRHSVNAARKTHLTEKPVALLEDLLAVTAPGPDAL
VLDPFAGSGSTGVACLNTGRRFVGIELSAEYHARASNRLAEVAQNMAQN
>DVU2843 DNA mismatch endonuclease Vsr, putative
MADIVDSATRSRMMSGIKGRNTKPERLVRSYLHAAGFRFRLHRKDLPGCP
DIVLPRYRAIIFVHGCFWHRHEGCNLASFPATRVDFWESKFAANVERDRR
NETALAEAGWRVIIIWECQIRAGELSWLPDAITGQG
>DVU1654 site-specific recombinase, phage integrase family
MDRWLEHLLVERGLAENTLAAYSADLIELQVFLEERGCLLAEVDEQTLFM
HVVDLRRRGMAGRTLARHLATLRGFFAFAVGEGELEADPALFLENPKLAR
NLPDVLTRDEMATILARPDLSDRLGFRDRTMLELMYAAGLRVSELCALRP
LDFDAQAGVVRVFGKGAKERIVPVHHVSCALVTAYLRDWRPAFSPVEPAM
FLNRSGKGLSRQAVWKVVKRHVAEAGIHKDISPHTFRHSFATHLLEGGAD
LRSVQLLLGHADISATEIYTHVQADRLRRIHNAHHPRTRRPRTP
>DVU0474 ISDvu4, transposase
MTTGKKVARRKLSLLELASELDNVSKACRIMGYSRQQFYEIRRNYQTFGA
EGLVDRLPGPREPHPNRVDEATEDRILAYSLEFPTHGPVRVAQQLVLQGV
QVSSGGVRGVWSRNGMLTRHERLLRLERHVRDTGIALNDDQVRTLERFSP
EFRERHIETRCSGDLVAVDTFFVGTLKGVGKIYLQSAIDCHSRYAFGRLY
TSKLPVTAVHMLNESVLPFFEEHDTPVVTVLSDNGREFCGRPDRHPYELF
LQLENIEHRTTRVRRPQSNGFVERLHRTLLDEHFRIQGRKNWYESLDEMQ
ADLDAYLRHYNHERAHQGRNMSGRTPYQAFLDSRPEGQPKEDNEGHYAA
>DVU1448 conserved hypothetical protein
MPYLLYHHFDPTFDHQNLKPGLAVGKGKVDHYNLGYVQNVVKGQVLAEFI
PIDDTDDPVIDRNHIFEEPLLPVGPNCKVDPDSPLRVVADANGYVFYNDG
LITVKRMLNVRRDVDFHTGNIFFVSDIAVHGDVRAGFEVQGNNILVKGII
EGATVRARGSLAVEGGARGSGGSGLLDAGDTLRVPFAESMELRAHGNILI
EKFCLHSLVYAATNLVVKNRLQGGTVHCNGLVYVETHLGNPKGTPTATRI
NMGYDPFTMRKLDRLEQHIRELQDSLTHIAGIAGNLGSDSAPGKRLDNAR
KKLNRLIRQREALWAALTEDEARAALCRVVVPGTVYPGVEISIGKAFFEV
EHEMNNVSFSLADGSIVVTSPAIIKKKA
>DVU1531 methyltransferase, putative
MRIIAGAYGGRLLKTVEGPGYRPAMSRVRESLFSMLSSRGVVWAGSRVLD
LFAGSGSLAFEALSRGADEAWFVELNAKAAACIEKNATSLGIEPQRWRVL
AEDITKVLGRRAAAPFDVVFIDPPYGEGRLAPTIRLMMRSRWLAPEGVVV
AEVEAGLAFDAETVHDGLEVIADRTYGQTRIVIWTTKEAS
>DVU2670 hypothetical protein
MRSFNLTVLGLEVSFKAEADPKRVESAKALVEERFDRLKFHGRQLSKEKL
LTFLVLGLADDLLQANRRNDETRERIAAVLAKIEELA
>DVU2338 DNA repair protein, HhH-GPD family
MRSDRQRLLLDMYAAMSARLGPSGWWPGETPLEVAIGAVLTQNTAWGNVE
KAIANLRDAGLLSDVGALLAASPQLVEACIRPSGYFRMKTTRLRDLMLFF
DEACAGDLDALSASAGEDGDALRERLLSVKGIGPETADSILLYAFGHPSF
VVDAYTRRILSRHGLLPEDVHYDEMRDFFMDVLDPDPVLYNEFHALIVRV
AKGWCHKSRPDCAACPLGPFMEGCAC
>DVU2029 ISDvu2, transposase OrfA
MSRQSAKEISTVEVVTMVQRRRWTIAEKLRVVEESSLPGMSVSFVARKYG
IAPNLVFRWRKLMSDGGKVAIQADDRVVSVAEAKALKKRIRDLERLLGRK
TMEVEILKEAIDIAREKKLISRSPLPFEDGSL
>DVU0719 ISDvu2, transposase OrfB
MKRVADSLQVSRSRLAERLDGPHRTRKPRYVKAQDEELLRLIRAILDERQ
TYGYRRIQACLNAHLRATGQSEVNHKRVYRIMRMNGLLLTRHNGKRPDKA
HEGKIVTLHRNTRWCSDGFEIPCDNREVVRVAFVLDSCDREVISYVATTR
GISGSMVRDLMLESVERRFGNAHTSHTVEWLSDNGSCYTAKETVEFASWL
GLRSCFTPVRSPESNGMAEAFVKTFKRDYVDCNICPDAPSVLKRLSEWFE
DYNENAPHKGLRMRSPRQFIRLSATAGCPV
>DVU3198 DNA polymerase III, gamma and tau subunits, putative
MSHASLTARYRPQTFAEVAGQETVKAILSRAAQENRVAPAYLFSGTRGVG
KTTIARIFAKALNCTTAPTGEPCNTCEQCRKVTQGMHVDVVEIDGASNRG
IDDAKRLKEAIGYAPMEGRYKVFIIDEAHMLTREAFNALLKTLEEPPARV
TFVLATTEPHKFPVTIVSRCQHFTFTRLSEAGLEAHLTKVLGREGVDYDP
AAVRLIARRAAGSVRDSMSLLGQVLALGESRLTIDGARGVLGLAGQELFL
RLMEALAAQDCLGVANVVRELLDRGVDMGFFLRELVATWRNLFMLRQAGE
AALASLDLPEDEARQWLGWAKRFEPAHIHACWQMTLEGQRRVLTSLEPAM
ALELLLLNLAMLPRLMPVESLRPSGGGASAPSGSAAEGPASGGAATIPTP
GTQGMQGTAPAAGMTPSPAAPATPAPSAAPSPRVPWDDAAPAPRQTGIPP
RPAPRMPEASPTAGSPAAPAQGDDSDTAEHTPSGPRTWDGFLEFCQGRNG
QGGRLATVLRQTTPEHDDGILRLATMSSVQYERLTDAATRTTLAGLVRDY
FGDACRVEVNPPTRVRRTEAELRKEAEAHPAVQLLKEEMGACILKCTPLA
DLRRPEDTTEQGDNKP
>DVU1481 nuclease domain protein
MRPPHNPCTRSIDSAKSHSKSTLRFFNNLFLLTVFFLKKIYAHKKMDEKQ
LIATTRKKHPPVHERFRHLIRSPTAAKHAQPDERLTFAATDMVTPHMLLY
RKRMLIRAALLCALLTCPSLVYAWPGVVLRVHDGDTLTVRRTSGDVVKVR
LYGVDAPELAQPGGPEARDYLREMLADGGTIDVRTMDTDRYGRVVGRVQH
GDVDVNAAMLDAGQAWVYPQYCQAIFPCVEWVVVTIRAALAQRGLWAAGM
PQPPWDWRREQRAAHADAE
>DVU2007 nuclease, putative
MKRLFVFMFFVCLSSFLLLISQDASAWEGKVVGVADGDTVTVLSKNNDQI
RIRLYGIDAPESAQAFGAKAKQSLANMVFGKVVRVEEKDRDRYGRVVARL
YVGSLDVNAEQIRQGMAWVYRHYCRDGFCSGWIGLAAC
>DVU3203 DNA polymerase III, delta prime subunit, putative
MKALSPALAARFDGVRARLEALAGSPPQVLLLEGATADERYAVALWWAAR
LNCREASSPCLACPACVQVTGGMHRDVFLFDGREGNISIDSVREVRSILG
EPPRGDGYRVIVFAEAQSLGEAAANALLKSLEEPRPGTSFLLLAPQRERL
LPTLVSRGWVLTLPWPRPMDAPAEAVTPWLDALAAFCGSGRGWFEKTGVR
GAVDADLATAVVLACERALLAALSGEADAGDGGHAPSPMATHPLTAFFSR
LGPEGMAQVDALLAHCSESLALRPSPVTPPMVLDWLAAHLFGLARSRRKS
PAAAR
>DVU2828 site-specific recombinase, phage integrase family
MVDGKRIVEMLGWTSEGWTADMAATLLAELERNVKQGLRPQTLKEKRQMA
AEAQAAAAQQAQLDALKDITFGELAERYAAWAKSTRISGHKMQRLLELHV
LPRLHSMPAASITPQHLNELRSELEQTTPLRGRGKAEGRGLSAQTVLHCL
KAVREVYNYARETPHPDFPERMLYSGKNPAVLSRRGHGVRLPRSDARRLR
ILNDAEISALLSYRGQNVVETSELHDMILISLDTGMRAGELVRLRTEDID
VDHGTIRIYSGSDAGITKGGRTRIVHAGHLFAESITMLRRRVGSPGLLFP
GRGGAVRNTTAVSRAMAHICATLGLNADVTDDRNRIVWHTLRHTYATRML
EAGIDIYTLKELLGHSSVAVTERYLHLCDRAKRNAALARLTRGE
>DVU1790 MutS2 family protein
MTLEARTLRALEYDKVLHHLARYCVSEAGREACLALAPCPGSDALADATA
LLEDARRWSEHTGFRLSVFPPLGGVFRYLEGQSAVLDLEALWALRQMLTQ
ARALVTSVAEGAATAGRWETLSTLTLRTPLPLRSVSGLERCVSEDGLLRD
ESSPELLLARQEIRRLHQQCTRKVKDYAQQYNILHYLQDEFMTLSSDRYV
LPLKSNFKGRLQGIIHDYSQTGETCYFEPMFLVEVNNRLQELKREERAEE
RKVLTYLTDLVRGELAGVRAAFDLLVTADVLLAKCALAAAFDGSVVRMES
GRTLDLRKARHPLLVLAGHAVQPVDIALGDGQRCLVISGGNAGGKTVSLK
TAGLITLMALSALPVPAAPGSSLPAWTTVHAFIGDEQSLEDHVSTFTAQI
THLGRVWDGLDDSTLVILDEFGAGTDPAQGAALAQAVLDELMAHGASVIA
ATHFPALKAYALSREGVRAASVLFDPKSRKPLYTLAYDQVGASQALDVAR
EHGLPESVLRRAENYLLLDGEDTSALVARLNSLAVDRERELDALRAEEEK
YRAKRMKLEERFARERETLFRDIQAQAQSVLRDWKDGKVSHKQTLKALSK
VRETLSTQPAESQAEQEQPVSVDVATLRQGQPVFHRPWGKKAVVAEVDLR
KSRVRIDMSGVFLWAEARDLAPSDARPETRASVTQTVSASPVPMRLDLRG
MRADVALSELEKGVDNALLAGRSVLEIIHGRGTGALRKEVHAYLRQSPAI
ATFSLAPEDQGGDGVTLVEFR
>DVU2063 conserved hypothetical protein
MTRAKNRGHSARQPFHIVPWDCDFLEAVLQLALRLTRNRPGDAVLVFPHG
RPRRHLIDRLRNAPGVPKPCLLPQMYTVQELFTRIRAEREQRPPQTVGLL
DRVGLLLECVTDLASPGTPLCEALTAGGQRHFFPWGARLSALLEDCFSQG
LRPDDLTHMEGQVAPFAASLLENLGRIHERYTLALMERGWSTPGFDAFRA
VDGLEGTPSCLEGRTVIIAGFAALNGTEERLFEHLWRHCGADICLHTDAA
VARMGQERVHWTCEDHVRWLTSWRAEAELLHAPRAFKPRVSFCEGYDLHS
QLHELGTLLQNTEDLSSTAVVLPDTGLLMPVLHHLPTKAVNISMGYPLVR
STLFRLLETLMRLQETRGSNGLYHWRECIDLIRHPYLKMLEVEGTRPLPE
VFHMVEDRLRGGTRFADLATVMEEALAETDVAPGTQDLCRTLLDLCLSRW
ERASTPAALAEAVGFLCAVLLERGGDLWERFPIDAECLFRLMQRVIPALR
ESELAATAFPQDVLFTILRETVRAERVPFEADPIGGLQVLGMLESRLLTF
RRVIVLDATDDRLPGAPPNDPLLPDSLRPQVGLPDARRRERITAHNFHRL
LAGAEEVNLLWQAGVERSGLLDDKKARSRFVEEMLWHEERAAGRLFRPGE
GPLGTVTCTVRPFESTPRHILKTDAVRDALARFFERPVSPSRLDAYLTCP
FRFYHEHLCRLAPPDEVIEGEDPAAVGTLLHEALNRFYAPWRGIEVTRDR
LDPEMLERHFRQSLHESGLADRFPADALAMLETAGPERLRRFLARQPDRT
VVLHLEEAFTADVEVDGRTRRLGGRLDRVDRRGEGAVVLDYKTGSLRTVR
PDVWEDHGLWERVRTWEPAADRPLTGQDEGSREDLLDELARRMPSVQLPC
YIHLYGQATGEDVHDAAWVELRDSGDERPLFGDRCDDAVRDEAISRHIPD
LMRFLLRHMELAPAFVPRHGRHCDWCSCRKLCRV
>DVU0991 conserved hypothetical protein
MIRSTFRHLPGVGPGKEARLWQEGCLTWDDALARGRLSCRGGGGAAAHLE
ESKARHEAGDAQWFGERLAPAEQWRLFSAYRHSVAYVDIETTGMAWPMAH
ITSIALYDGVTVRTYVHGENLEAFADDILPYRLLVTFNGRSFDAPFIERS
FGIRLRMAHLDLRPVLRAAGYTGGLKRIEHSLGMGRGDLEGVDGFTAVLL
WQHYERTGDVRALETLLAYNVEDVLSLEQLAVFAYNRHLAELPPLPVATL
PQCGCAHNPWNAHPEVLARLTR
>DVU0833 conserved hypothetical protein TIGR00252
MVDARHATGQHGEDEAAALLQRTGHRIIARNWRHGGLELDIICETGDTIV
FVEVKTRAAHGLTSPTDALTHQKRHRLIRAARAWLAAADAWDRACRFDLV
CVTQRGATCTLEHITDAFDLTETLGGGDTSWQPW
>DVU2702 conserved hypothetical protein
METAALVSFILNGFLTLAGTLFGFVLRAAWQQLDALKQELAALRERMTDQ
CVRRDDYTMMRGEVLSQLERIDSKLDRLAQRLTRETGGPYEQG
>DVU0762 conserved hypothetical protein
MNVRIEDMPDLRVACIHAPGPYATAAPQAWQELSAWMGHNQMLTFETLFV
GVLGDTPCGLASESTGYDAGVSVPQHIEADGYVSVRIIAGGPCATIVHKG
PHKTLAEVWASLYWEWLPASGRITREAPCVEVYLNAPDSTPDHELLTRLH
LPLSPI
>DVU1738 site-specific recombinase, phage integrase family
MKGCRPLTLDEVRRASRAFGGYHAVRNHCLFVLGVNAGFRISEMLSLRIR
DVVRGRLVVREVAVPRRAMKGKREGRTVYLAPVARQAIWRQIDALHAAGS
WHVDTFLFRSRNARNRPIRRETAWRILQEAFGSVGIVGKVGCHALRKTFA
NMVYEFMLARVASGEPVDPFYEVVKALGHADPKSTTAYLAFRNERVRAAV
LHIGEVLHGDHAHG
>DVU2878 adenine specific DNA methyltransferase, putative
MENLNIENWPVDRLHHSEHATRRNDDAIPRMVDALRMFGFRIPLLVTGAG
EVVDGHLRLKAAIAMGMTSVPVIVVDDMTPTQVRTFRLLVNRSATWAEWD
DEALRVELASLRDFGVDLTMTGFADAELDAFLQGVALAGETDPDMVPPLP
EAPTSRPGDVWNMGGHRLLCGDSTSVEDVVRLMAGEQADMLWTDPPYNVD
YSGKAGKIRNDKMSPEDFDAFLLRLLSRSYEALADGAAAYVAHSEAGGGT
AFRKAFAHAGYKLASCLIWRKHQLVLGRGDYHWQHEPILYGWKPTGKHRW
YGNRKHTTLLEHFAGQTVLPAGEGVWQVATGDAVLLIRGQDVTVEEVSTS
ILAVAKPARSELHPTMKPVALVERMVANSSPRGGLVLDPCGGSGTTLIAC
ERMGRRCNTMELDPRFADVIVRRWEEVTGKTAVLEGGASFADVQLAREVA
HA
>DVU2066 site-specific recombinase, phage integrase family
MAKLTDRGRATARGPRSAARGRGGASFSQSDGDSATGGDAAVPETLELFL
AHVELEKGYSPATVTAYGTDLMQFHGVLTAEGFGLDAPEDVTRRHVQRYL
AELHRLRTARSSVARKLSALRAFFRYMLRLRRVTADPVAAVHNPRQEKRQ
PRTLNVDQVFALLDTGHGPATGAPDGDCDAGVATRKSMGNTVDDAVCGHG
SGSLVSGHHDAPRGTVSGAGADAGAAAVPTLPAGSTSRKPLSTAVESMSG
DTLHAEAIRRRDLALAELLYGSGLRISEALGLDVLDADPSAGVVRVLGKG
SKERMSPLSDTSVDALREWLHFRHHLASEGERALFVGARGDRLDRRQATR
IIDALCRRAGLPQSVSPHGLRHSFATHLLEAGADLRSVQELLGHARLATT
QRYTHLTLAHLIEVYDKAHPRASLGVSQYAAPKPESVPILASEPLSGPTS
SASSREDSERRQPSRSRARKKSHG
>DVU3359 hypothetical protein
MNERDAHVVRLFDRHGDLYGVMLSPDLWRAVERKVMPVLEQALEVMYPTE
RPEPVEDLKMFKDYWDFRYPYVPDVHCDHCGAATEDWENDPVHPFRLRNA
TLSGMLVFTCRQCGAAIRKKHFKDHICFEFTPPGCGCGS
>DVU3202 hydrolase, TatD family
MSKKKPERPAPESLGLPCCGVESHAHLDLDAFAEDLGDVLQRAQQAGIAR
MGNVFLGPQAYARNRHLFDSHPSVFFLLGIHPCEGHTCDEAALDAMRKAF
ASDPRLRAVGEIGLDFYWDDCPPDVQRAAFRAQLALAREVSRPVVIHARD
AAEETIAILEGDGFRGYPVLWHCFGGDAPLAERIVDNGWHISIPGPVTYP
ANTALREAVHVIPVDRLMLETDCPYLTPVPYRGKRNEPAYVVFTAQCVAK
ERGMDTADLWTTAGDNARRFFGLDDGQA
>DVU1855 integrase, truncation
MALTDIQVTALQPWTKAYRIADASGLCLEASPNGHKLWRFRYRLQAKANM
LVRGVYPQVSLKQARLARDEAHLKLAQGVNLSSRVFTRFRPQHLVSSPAD
VQVPRL
>DVU3070 conserved hypothetical protein
MKFLGIDYGQRRTGIAVTDAGGRMAFPRRTIAMTTRDAFFVELLGMVEVE
CPDAFVVGLPRLPGGEETLTTRQVRNFVERLKRRTTLPVYFMPEELSSFE
AEDDLRDAGLRGRRLEAVVDQQAAVRILESFLAVPEERRSLA
>DVU1515 type II DNA modification methyltransferase, putative
MRYISICSGIEAATVAWHPLGWHPVAFAEIEPFPCAVLAHHFPNVPNLGD
FTTIVMEQYRGTVDLVVGGTPCQAFSVAGLRRGLDDPRGNLTLAFLRLLA
DIRPRWVVWENVPGVLSIDRGRVFGAFLGGLAQLGYGFAYRILDAQYFGV
PQRRRRVFVVGHLGDWRRAAAVLFERHSLSGNPAPSREAGKEITRAIASG
SFADSAGGDSNGPSRGHSTPDVAACLRARANSSHRADADTYIAAKPLLAS
QGQRMDPETENLIPWPVDIAPTLNAAFGAKQGREDQHALGGAGLFVPCSL
AIRGREGGGTVDGYFGFPAPAHAFKVRCGCKGGGKGYLGSDDTAFTLSTG
TDQHLQHGMSVRRLTPRECERLQGFPDDYTRIAWRNKPATACPDGPRYKA
LGNSMAVPVMRWIGERIQSTLNTQIKNQKASTACTASGNHQRGMRGSAMA
DNPQHVSTTVLRSYYDRMYAFGTNSTDTLSPSERDAS
>DVU0584 transposase, putative
MSAAWRREHPLPAPCRMRYTCGMNPTEIVQASSSEEAARKLLLDICWAGG
RRFCPRCGGDRLYGLSGGRHRCAGCKYTFQDFAGRWINNGGLPADAWLRL
VTLFAAEATAHQMAGELGLSYNATYKAVTTLRFAILAHAPDARQLLGPET
GLGAYLKGRKLTGLPSSHGRGPVPVFGILERNGWVFIDLVSGLSAETVFH
FNHSFHLRIERAGYLVHTAPYRQYDALVLSGDDSLPYEYIRKVETPPSQR
REGVFTRYAVERIKAFKGVSPQRFPLYLKELEFRYNHRGEALEPLLLRYL
CDMVPDMEFRHP
>DVUA0135 CRISPR-associated protein Cas2
MYGNDAMLVLISYDVSFEDPGGQRRLRRIAKACQDYGQRVQYSVFECVVD
PAQWAKLKHRLLSEMDKEKDCLRFYYLGANWRNKVEHVGAKPAYDPEGPL
IL
>DVU2842 type II DNA modification methyltransferase, putative
MTSQLSFSFIDLFAGIGGIRLGFEAAGGRCVMSAEYDKYAQKTYRAFFGE
SPDFSEIMSVSPPGDITKLPPHLVPDHDVLTGGFPCQPFSLAGVSKKQSL
GRPHGFDDPTQGTLFFNVKEIIKSKRPKAFMLENVKNLCSHDSGRTFRVI
RESLEGLGYRMHYRVIDARDWIPQHRERIFMVGFRLPEACPAGAQKWDVK
DFDFGKVSRRGSQKDLESVIEPDVPEKYTLGPGTWNTLVRHKANHAAKGQ
GFGYGMITPPFAGQTTRTLSARYHKDGAEILVAQPDRPRPRRLTPLECCR
LMGFPKECQRWFDRRDEAHPQPVSDCQAYRQFGNSVAVPVVKAIARAMAE
ALKRNGAI
>DVU3144 cytochrome c family protein
MHNANASFPRRQRLAVLALALTLLLPGASAWAAEVPPGATGLVGKLPEHH
ITADHSKHPALQQPFASPQEVTKACLSCHNQAALQVHKTIHWTWLDPADP
TRKMGKGGITFNNFCIAVPSNEPRCTSCHAGYGWKDKNFDFSAQENVDCL
VCHDRTGTYKKFPTMAGMPVSEPTKFGEEQFDPPDYNAVAAAVGRPTRDN
CGNCHFYGGGGDAVKHGDLDSSLHTPKREIDVHMDVKGANFTCQRCHTTD
VHFIAGRTYKEPAFTERKSLVQDDQVKRIACESCHTATPHKAGHKANDHT
DKVACQTCHIPAYARAIPTKMWWDWSTAGKKKDGKNYKEKGPLGKPVYDT
QKGDFRWEQNVVPEYKWYGGRMDYLLLTDKVDPAKPVEINRVIGSPDDPN
ARIMPFKVHRGKQPFDPELKTFVVPHLFGKDDAAYWKTYDWAKAIEAGQK
AVGLPWSGKYTFVETAYHYPITHMVAPKEKALQCADCHSPAGRLAGVGGV
WMPGRDASSAADTLGWIAVIGSLCAVTVHGILRLNARKRNDG
>DVU1098 adenine specific DNA methyltransferase, putative
MTRIFDDERLTLLQGESLAILRTLPDGFVDTVLTDPPYSSGGVTMAARQA
DPAQKYQQSNTKRTYPAMLGDNRDQRSFTLWATLWLSECWRVAKDGARIM
VFTDWRQLPSMTDALQAAGWMWRGVVTWHKPSARPSLGDFKRDAEYVITG
SKGKPIMHSRKCPPGVYSHSVNTARKIHLTEKPVALLENLLDITAPGGLV
LDPFAGSGSTGVACLNTGRRYLGIELSKEYHQRACERLAAHQQAVGS
>DVU1399 ISDvu2, transposase OrfA
MSRQSAKEISTVEVVTMVQRRRWTIAEKLRVVEESSLPGMSVSFVARKYG
IAPNLVFRWRKLMSDGGKVAIQADDRVVSVAEAKALKKRIRDLERLLGRK
TMEVEILKEAIDIAREKKLISRSPLPFEDGSL
>DVUA0134 cas1, CRISPR-associated protein Cas1
MKKLLNTLYVTTQGTYLAKEGECIVVRVGDEVRLRVPVHSLGGVVCFGQV
SCSPFLMGFAAERGLGFSFLTEHGRFLARVQGPVSGNVLLRREQYRRADS
PEASAEVARSIVSAKVVNARGVLQRAMRDHGDKVDGVALEAEVLHLRACL
MRLQQPAGLDAVRGIEGEAAKGYFSVFDNLILTREAAFRFEGRSRRPPLD
RVNCLLSFIYTLLGHDVRSALEGVGLDSAVGFLHRDRPGRHGLALDVMEE
FRAVVADRLALSLINLGKLKKSDFEIQETGAVRMTDDARKALLVAYQKRK
QDEIVHPFLNERIPLGLVFHVQAMLMARWLRGDLDGYPPFVWK
>DVU0071 dinP, DNA polymerase IV
MHIDMDAFFASVEQLDDPSLRGRPVIVGGSSERGVVSAASYEARRYGVRS
AMPTVTARRLCPHGVFVSGRRHRYAEVSRMVMAVLHDFSPVVEQASVDEA
YLDATGLERLFGPVDEMAQRLKGRVREATGGLTCSVGLAPVKFLAKIASD
VNKPDGVFILPPEDVAAFLATLPVGRIPGVGKRMLESLDLLGVRTAGDVL
RHPVSFWERRFGKGGLVLYDRARGIDPRPLEPWTPPKSESAEVTLAADTA
DRAVLRRWLLAQAERVGGSLRRQGLAGRTITLKVKYADFRQLTRSRTLPE
PVSATQTIFEEAWALLEALDLEAKVRLVGLGVSHFGGERQMSLPIGGMPR
RDDTRRERLDATLDRLRARFGAGAVMRGDLVDFGDE
>DVU0001 dnaA-1, chromosomal replication initiator protein DnaA
MLQQALRQHLRQTCSEQELHQWFDPLDLRLDDAQQRLEVRFPHPHFARWF
EAQALERFTAGVRDVVGTSVALVFPEGIKTTDRSTVQPPSQPPLASESVA
CPFGAAFTFDAFITNRKNQFPLAAAREAARNGHQRTYNPFVLCGASGNGK
THLLRALANELAALYGTDAVFCGSAEELHDRYNTEERLAMRRTLCAHRAL
LLDDLHRLRALPDLREELTALFDHFYDHGKQMAFAYAGRLSDLDFLEAPL
RSRLELGLIVDLKEPDLDVRVRYIHARCAALSLQLAREHVLTLAQRCHEF
RHLSGLLLKVAAYRDMVGRDILDRELEQILRNTDSGPERAVAPDTIISAA
AEHFGVTPRDILSDKRQQHIVQARQVAMFLCRELIGSSFPALGRMFGGKD
HSTAMYAVKKIKKLQYDNKDMHALVAELKRRCLNHDG
>DVU2252 dnaA-2, chromosomal replication initiator protein DnaA
MTSIWGQIQHILQNTLAPGLFKVWISPLAGEVDGSTLRVEAPNEFVAGWV
RDRLFEDIRTAACGVIGDTVEVVVTAGAPAAAAPRPVLAPRPAVVEVVPT
AAPVPSVVPAVEARPSGHAPRRLSAETQQAQEQLGLPLDWAPVPQSRTNW
RFSFDDFIVGPNNELACAAARGMCRDGLMTDTLFLSSGPGLGKTHLLHAV
GRSLCESSNRSNPNVAYLTAEEFASRLIAALKARDVERFKARYRDVDVLL
LEDVHFLQGKEKMQDEVLATVKALQSRGSRIVFSSSFAARDLKNVDNQLV
SRFCSGFLAGIERPDFDTRRRILREKARIYQVMLPDNVTDLLAERISTDV
RQIESCLHNLILKAKLLNRQISLEMAFEIIGNYAQAETQLDFEGIVRMVC
EGFGLSPEQLNSRSRKREYVVARNAAYLLARKHTDLSLKEIGDRFNRRHS
TVLKGITALEREMNRETPLGRQVANTISLLERNGRITHARH
>DVU0959 dnaB, replicative DNA helicase
MSLNQPRPKSRKPQQNNYSSETTPAYGGGGADGAAERASAELLRRVPPHS
IEAEQAVLGGVFLKNSILHTLVDTLTAEDFYLPAHQMLFESFLELYRKNA
PIDLVSVAEHLKAHGNLEAVGGAIYLAELAQAVVSAANAEYYGTIVRDKS
LQRSLISACSDIISNCFDASREVGSLLDESEQAVFAISERTSGKVFRSSK
ELVKKVFEELEKRVERKELVTGVTTGYVKLDQMTSGFQGSDLIIVAARPS
MGKTAFSLNMAMRAAINQNVPVAVYSLEMSMEQLMMRMLCSFGKVDLSKL
RKGFLDDEDWKRLYEAADVLERAPIYIDDTPALTTLELRARTRRLRAERG
VGLVMVDYLQLMRSSRRTDSRELEISDISRSLKALAKELNIPVIALSQLN
RKVEERTNKRPMLSDLRESGAIEQDADIIMFIYRDDAYNKRDDNPRKGIA
EIIIGKQRNGPTGTAELAYLSAHTAFEDLDPNWVPPPSEDYGE
>DVU1353 dnaE, DNA polymerase III, alpha subunit
MSDFVHLHCHTEYSLLDGAIRLKDLGARAKDYGMTAAAITDHGNLFGAAY
FYTTCKSFGIKPIIGCEVYVAATDRTDKTSEFARTRYHLVLLAQNNEGYH
NLVRLVTRGFTEGFHYKPRVDKELLREYSDGLIALSACLAGEVPRVLMKQ
GMDAGIATAQEYASIFPGRFYLELQSNGIKEQEVLNEKLIELAGHTNLPL
VATNDCHYLDATDVEAHDILLCIQTQTTVDDPKRMRFETRELYYKSPEEM
EKAFAHVPEAIANTGRIAEMCNIEMSFGKYFFPVYELPEGMTLDTEFQRL
AEEGLKKRLEKHPDRDTIDHKAYWDRLEWELKVITDMGFPGYFLIVQDFI
NWAKNNGIPVGPGRGSAAGSLVAWSLRITNLDPIPYDLLFERFLNNERVS
MPDIDVDFCERRRTEVIRYVAEKYGEDSVSQITTFGKMKAKAVVRDVGRA
LGMSFGETDRIAKLIPEDLKMTIKKALEAEPDLATLYRDDPQIRKLLDVS
MRLEGLSRHASTHAAGVVISDKPMSEYLPLYKGKKGETVTQFDMKMVEKV
GLVKFDFLGLRTMTLVQDALDEITRQGKTPPDLDTLSLDDAETYELYSRG
DTDGVFQVESSGMRQYLRMLRPTCFDDIIAMLALYRPGPLGSGMVDEFIK
RKHGEVPVTYPVPSLEACLQPTYGVIVYQEQVMQIAQIVGSYTLGGADLL
RRAMGKKIAEAMAEERTKFVQGAQKNDIPKEKANEIFDLMEKFAEYGFNK
SHSAAYALISYYTAFLKVHFPVEFMAALLTSEMGNQDKLLKYVAACKDMD
IEVLRPNVQVSRREFTVHEGRIVFGLGGIKNVGDEAIREIVDAREEGGPY
ASLLDMCVRVNLRKVTKRVIENLIKGGACDCLGCTRAGMLASLDTVVARA
QKKLKERDSNQVSLFTMIKEEPKVCPGIGFDCEEQTAPEWPDDQKLRFEK
EALGFFLTSHPLQPYRKELFRLRLTPLEEARDMPPGAEIRTAVLVTTLKE
LMTKKGQRMAFAGVEDLTASAEVVFFPEPFAEARELLKSDQPLLLEGTLD
KKADDGNGGQGQGGDDEEAAPRDIKIMGAKVMPLAMACCSSDEPVIVELD
TRRMSADYLAGLRAILEKHKGTVPVNVHMVVDESLCLLQLGPRWTVQPGP
VFENDLNKWTHGGM
>DVU1789 dnaG, DNA primase
MKRRDGSVVQAIKSRLNLVDIARRYVELRRAGGRWMAPCPFHQETKPSFS
INEEEGFFYCFGCQASGDLFDFYGRINGLDFRETLEQLAEEAGVALDDWK
PDPRAQQEQSLRRQCLRMYDVARAHFVGNLAKREGQECRDYMQRRAIAPE
IIESFELGWSLREWQSLADTLRRAGFAQGLAVKAGLLATSDSGRAYDRFR
GRLIFPIKSLAGQVIAFGGRIIAEDDQAKYINSSDSPIYKKGDHLYGLYQ
ARRAISQHKVAMLTEGYMDVLTLHQFGYNNAVGVLGTALTPEQVKRLSGF
CSTVELLFDGDNAGRKAALRSCEMLLVRGMRCKVVLLPQGEDIDSLLHGA
GRDAFESIRNEAPDGLDFCMRSLAAQAPRDMLDWTKGFLAQVEQPELLSY
YITRLAGGLGLNEAELRDSLAERVKAHAAAPAKKPVARGHASRDREIMTF
AVRYPHCLPQLQEAGADLVLGTEWARTLWDKIERHGAEEVVDHLSEREKT
FWIRCRTGEVPPLDNEEGELAAVRHMLADMQLKVQSASCMAALRQQMGGV
SDPAADIELLRALQETLGRSHE
>DVU0002 dnaN, DNA polymerase III, beta subunit
MYLKVYKEDVIEGLQKAANIIPAKTGAAYLRSIWLNAADGTLSVMATDSN
IEFRGTYTAEVTEPGLAGVQGRAFVDLLRKLPAGEIVLQLDAEANVLRIE
QGRRKYKLPVNDPVWFQNFSDFPADGAVVWSGDFLQELIDRIAFCISDED
AVEAIACLFMKPVAEGRIEACGLNGHQFAMLRFLHDDLHAKLPAEGVLVQ
KKYLGELKKWLGADEIELNISEKRMHLRTGDGRETFSLPLSSYQYPDYMN
FIAKLQGEGVSNLEVDRKEGMDALDRLQIFNSDNNRCTYFDLSGGEVVLT
AQGQDVGSASESLEASYDGDIRRIAFPTRNLIDIMNHYQSGRLRLTLTGA
EGPCGISGEEDPEYQVIVMPMKIVEETYYSEEEV
>DVU0004 gyrA, DNA gyrase, A subunit
MERAPHGARRPGSNTTRQAVSEQQQISIEKELRKSYLEYSLSVIIGRAIP
DVRDGLKPVHRRIMFAQHELGNAYNRPHKKSARIVGDVIGKYHPHGDSAV
YDAIVRMAQEFSMRDPLVDGQGNFGSIDGDAAAAMRYTEVRMSRLAGEFI
ADIEKETVDFRPNYDNTLLEPVVLPTRVPNLLLNGSTGIAVGMATNIPPH
NLGELCNALLHLLDDDACTIDDLMDHVKGPDFPTGGFVYAGQGLVDAYTT
GRGTVKVRGKVEIEERKKGFQAIVIREIPYGLNKSSLVEKIAALVNERRI
DGVADLRDESDRKGIRVVIDLKRGTIPDIVVNALYKYTPLESSYGINMLA
VVDNRPQLLDLKSALSHFLEHRREIIIRRTRYDLRKAEARAHILEGLRIA
LDNIDEVVALIRASATPQEAKDRLMQRFGLSEAQSQAILDMRLQRLTNLE
HEKLLDEYRELLKKIEYFRSILENIEVLRQVMREEFTEIRDTYATKRRTE
VLMDELEGIAIEDLIPDDDVVITLSRRGYIKRTTLDNYQQQRRGGKGIAG
LHTSDDDFVQEFLTTTNHQYLLLFTNHGKMHQLKVHQVAEGSRTAKGVHI
ANLLPLEKDEWVTTVLSVREFAEDRFFLFVTKRGMVKRSSASLYARARKG
GLIAVGLRDDDELIMVREIHNDDHVVLTTGGGMAIRFACPDVRPMGRSAT
GVKGVALSGDDRVVACAVLPGDDTSTEIMSISSNGYGKRTRIELYRLQSR
GGKGVKNFRVTPKTGDVIGAMPVRDDEALVLLTSTNKIIRMSVDEVRSVG
RATMGVMLVRLDEGAIVVGFDRVDEREVVEESAPAQSSEQKTAPEGGDAG
TEGTAG
>DVU0003 gyrB, DNA gyrase, B subunit
MTTGTGNNYTADSITILEGLSAVRKRPAMYIGSTDARGLHHLVYEVVDNS
IDEAMAGFCSKVVVKLHLDNSVTVSDNGRGIPVDMHPKEGRPAVEVVMTK
LHAGGKFDNNAYKVSGGLHGVGVSCVNALSEWLEVRVKRDGQRYGQRYAR
GVPQEDLRVLGASEGHGTTVRFKPDEEIFETNQFSYETLRKRFEELSYLN
RGLEIEFIDERSGESHTFFAEGGIRQFVKDLNSGETGIHPIVAGEGKTDG
VVVDFALQYNAGYKENVLTFANNIRTKEGGTHLAGFKTALTRAINGYVKG
QADLTKKMKGTALSGDDVREGLTAVVSVKLPQPQFEGQTKTKLGNSEIAG
IVAGIVYDRLNVHFEENPKDVRLIIDKAVDAARARDAARRAKELVRRKGA
LSDNALPGKLADCQSKDPALSELFIVEGDSAGGSAKQGRDPSTQAILPLR
GKILNTERTRFDKMLANKEVKALITAMGAGIGEDDTDYDKLRYHKIVIMT
DADVDGAHIRTLLLTFFFRQYQKLIESGYLYIAQPPLYRAHNSRMERFIK
DDAELNNFLLTRVSEDVEVRTPGGCSFKGTDIVRLMRSIETVAARIRDVE
TAGISRELFLGFLEYGERITPEWFEQHDGNGLRPWLAGRGYSMTAELESG
DEGDRTFVVFENTNGHRTRIGAEFFGSRMYRSSWDALEAIRSECGGLSFT
LDRKGETVGEGDMFDLQRMVFEEARRGLNIQRYKGLGEMNPEQLWVTTMN
PENRTLLQVSIEDAEEASDAFEQLMGDRVEPRREFIVRNALAVQELDI
>DVU1543 hrpB, ATP-dependent helicase HrpB
MPPEQTSFRRLATPSLVSALPRLTDALLSAGRCVFVAPPGAGKTTVVPLH
LLDAPWLRSRRIVMLEPRRLAARAAARFMARLLGEQVGETVGYRMRLDSR
VGPRTRMEVVTEGVLGRMLHDDPTLEEYGLVIFDEYHERSLQADLGLALC
LDVADALRDDLRLLAMSATLDAAPLGSLMGGCPVIECEGRQWPVEVRYAP
PVNRAGYPSSFEDNVAACVHRALAETEGDVLVFLPGGGEIRRTARRLEGL
DAHGVGVHMLYGDLAPALQDAALAPDVSGARKVVLATALAETSLTIEGVR
VVVDGGLARFSRFDPQSGMSRLVTERISLAGATQRVGRAGRTGPGVCYRL
WHEGETASLRPFARPEVLDADLAPLMLQLSAWGVLDPSKLRWLDAPPEVN
VNQARILLQSLGAIDASGRITGHGKSMNALPLHPRLAHMVLSACRSGSAS
LACVLACLLEQRGVAERMPGCDIRPSVEDAVRRMRHKPRGASREGWEVRL
ASSVDRIAALAGVRLDAGRALSDVARCGVLLGFAFPDRVAMNTGEGTFRL
SCGRGAAVPADDALAREPFLVAAELDGDVTRARIWRAAPLAAEEVAMLAG
GAITEQREVGWDDRQGVAVAHVERRFGALVLERRRIDDVDDTLLAHAVMR
GIRTRGLRCLPWTQELRQWQARVELMRRHDTPGGQWPEVADTRLEAELEE
WLIPFLSGIRRAEHFARIDLQSALKNLLSWEQARRLDAEAPTHVVVPSGS
RVPLDYTAEGGPVLAVKLQELFGMAESPVVAGGVSVVVHLLSPAGRPLQV
TRDLAGFWRTGYASVRAEMRGRYPKHPWPEDPLTAMATRHTRKRAGL
>DVU0396 hup-1, DNA-binding protein HU
MSKTLTKAEIVDAIYEKTDRNRAEVKGVVESLLGIMKQAIKKDHALLISG
FGKFEAYDKKARKGRNPQTDETITLPPRKVVVFRLSRKFRAELNE
>DVU0764 hup-2, DNA-binding protein HU
MTKAELVEKIHAKAGLATKAQAESALDATIAVLADAMAAGESVTFTGFGS
FKVADRAARKGRNPRTGEEIVIPAGKVVKFTPGKLLKDAVK
>DVU1795 hup-3, DNA-binding protein HU
MTKADLVDKIAAKANLTKASAERSLNAFLDAVKDVLASEGKLTLTGFGTF
AVESRQERKGRNPRTGAEIKIPASKVVKFRPGKTLKDAVK
>DVU3187 hup-4, DNA-binding protein HU
MLTKAEFVAALKDSLPDVFETKVSAEKAYDTFCKIMADGVANGQGVRLPG
VGALTVTERAARTGRNPQTGQTITIPARKAVKFAAAKALLDGING
>DVU1134 hupB, DNA-binding protein HU, beta subunit
MNRKELVSAVQNTLERTGCKITRRDVERTLDVFGDVAAAELLEGGDVPLP
VLGKLRSVERAARAGRNPRTGESIAIPARRVVTFKAGKDLREALG
>DVU1679 idi, isopentenyl-diphosphate delta-isomerase
MSDTTEYIEVTDDQDRPLVIMPTNEAGRQRLRRRVVLVALYDSRGRLCLQ
RRSPHKLIHPGCWDLSATGHVRAGESRDEAALRELSEELAVTGVRLRHIA
TLAASQATANTHVTLFEASGYRGLPIPCTDEVTEVTFTDADELQGLITHF
PDLLTPALLWAAQHGHLFPSVTRSDTMS
>DVU1608 ligA, DNA ligase, NAD-dependent
MTEVKTGRVVDDAPVNDAPENNAAEATSPARHDAIPEEARQRAAQLRADL
ERHNRLYYELDTPEISDAEYDALYRELVGLETRWPALRDEASPTQRVGGE
VLEGLEKQAHTLRMYSLDNAFSRDEWGAFIQRMYNALPDAPSAFWCDPKM
DGLALEVIYENGVFTSALTRGNGEVGEVVTAAMRTVRNLPLALRGDDVPR
RIEVRGEVVIAKADFEQLNARQSAAGGKLFANPRNAAAGSVRQLDTTVTA
GRPLQFLAYGVGQVVLEGGTAPWTTHSGLMARLREWGFDTPPEGRLCASP
DEVWAYYEALGARRESLAIEIDGVVAKLDDTEAQEALGFTARAPRWALAL
KFPAMQARTRLDDIRVQVGRTGVLTPVAILEPVRVGGVEVSRATLHNEDE
IRAKGLMLGDMVLVQRAGDVIPEVVRPLVEERTGDERPFVFPENCPECDS
PVVRPQGEVAHRCVNVMCPAVRRQSIIHFVSKAGLDVRGVGERWVQQLVD
GGHVTSPVGLFLLTKLDLMRFERMGPTSAANFVTALDAARTGATLVRLIC
ALGIRHVGEQTARTLAANFTDLDALREADAETLQQLPDIGPEVAGSIRSF
FANEGNLELLERLRAIGLWPKRQDAPPASEGADAIVLPLQGLKVLFTGSL
TRVGRTEAEDMARAAGANIASSVTKSLDLLVVGGKPGSKLEKARKLGIRV
MEEADFFAMLASGVASVDASEAVAEETPPSQEAAGAEDAPSQGAAHVRTA
SDETGSASGDDSRGAAAENDPARPARGGAMSTAEGEDVPRGRAEQLKLF
>DVU1903 mfd, transcription-repair coupling factor
MLDFAALVRKLASKGCGHIEVTRSGMATAARLGNAVLDAGRSAVMVVRDA
EELALARGLLTLFSPDASAGDSPLVKPRWESRWVVMPQHPLGARNRDAWA
SRMAALFALGQKRVPQGVLITVDNFLSKLPPADLFASHELTLACGDEMAP
ELVLEQAVDWGFDRVQMVSRPGEIAVRGDIVDIYPPGYERPLRLEFFGET
LEEIRLFDASNQRSLGKLDEMVLLPVSPVVLSAELRSKATARWKRLFSKG
MLTEEQYAGLLRGIERHGEGLMPGAYYEAPTVVEEWLPRDAAWILPGRKE
LVDAVEAAQQNWEALFDKQAEEGGARQPRGLVLRDAAPVRQLYEEKDSAG
FEPLVMGVERTGVDMPERKLHGFVDLFPAPDARDRPWQALVAGLHRFVAT
HARVLLCFGNERGRRKFLKLAEQDGITPTLRYDPKGRGLMAVVAPYRAGV
ELAWDGTLVIGEDVLQPKTDRSARVASGAFRGLDKHEGLQPGDLLVHRDY
GVARFVGLERMDLGGVGNDFLLLEYAGDDRLYLPVDRLSLVQRFKGADDT
KPSLDRLGGGAWQSSKDKARKAIEKIAADLVEMYAYRKIAKGYTYGPIGE
LYREFEASFGFEETPDQARAIQDVLEDMDKPVPMDRLVCGDVGFGKTEVA
LRAAFRAASEGRQVALLCPTTVLAEQHYQTFRSRLAGFPVNVGMLSRFVS
KQKQTEVLAAAAKGHVDILIGTHRLLSDDVRLPNLGLLVLDEEQRFGVRH
KEKLKQFRRNVDALTLTATPIPRTLQLSMSGIRELSVIETAPPERKPVAT
ALIERDDAALKSILEREIAREGQVFWVHNRVQGLERTTEYVRKLVPDARV
GMAHGQMTERALEETMHRFWHGELDVLVCTAIVESGLDFPRANTLIVDQA
QMFGLGQLYQLRGRVGRSDRQAYAIFVVPDADNLSDIARERMRVILDMDY
LGAGFQVAMEDLRIRGAGNILGEAQSGHMTRVGLELFLEMLEEAVTRLKG
DPPRESVETELNIGIPAHIPEGYIEDARDRLRFYKALSSATDAAAQQDIE
MEMRDRYGVFPPELETFLALLVLKRQLRRMQVQRADIYPDKVRLVWDERQ
TAVDIGRLIEWVGQHADRARLQPPATLEWRLDTGLAAGARLDAMRGELFR
LVPDSTPSSA
>DVU3256 mutM, formamidopyrimidine-DNA glycosylase
MPELPEVETIACGLRPALSGRRIVGVTVHNPGTLEGPLCTPAAFTEAVQG
QRIADVGRRGKLLLVAFASLPPVGHAGQPRPEGLSSSTVRDFLVTHGFHA
AGCATSVHACAPLLADGQQTRGRLAGHGDGMDGTSRTGSTLPGTGGTENS
DAVAVADDDTVLGLAFHLKMTGRLFIHPPATPAGIHTRVVFDLEGGTRLF
FDDARKFGYVRCITRRSLALWPFWRDLGPEPLETEARGFAARLARRRGRI
KALLLDQKVVAGVGNIYADESLFRAGIRPDTQAHTLTPERLFALHGHLQD
VLRESIAECGSSIRDYRDAHGDAGAFQNSFRVYGRGGQPCRHCGTTLATA
QVAGRTTVFCPQCQR
>DVU1649 mutS, DNA mismatch repair protein MutS
MTNPSPKLTPMFEQYLRIKEDYPDALLFYRMGDFYELFFDDAETTARELQ
IALTCRNPNAELKAPMCGVPYHAVEGYISQLLDKGYRVAICEQIEDPKEA
KGLVKRAVTRVLTPGTVIDDANLDAKEHNYLGALFWNQDAEAGAFAWVDV
STGEWSGLYSRKLAELWQWAQKMAPRELLLPEGVDTPAMATLGTTQTVRV
PARSHFDLKSGTERVMRAQGVADLGSLGLEGKPELVRACAALLAYLAQTQ
KQELSHLAPFKPLNLGRHLIIDEVTERNLELFHRLDGRKGPGTLWHILDR
TLTPMGGRLLEERMHHPWREASPIRETQQVVEWLFQDDVRREALRTALDL
VYDLERLSTRIFLNRATPKDFIALRQSLSALPAVRATLERPANPEGTYPT
DAETSGDTLPKPLSDMLSAWDDLADYADLLRRALTDNPPHLVTEGGLFRP
GFDPDLDELLDLAEHGEARLQELLAEEQTVSGLPKLKLGYNRVFGYFFEL
SRAGADSVPEHFVRRQTLANAERFTTERLKELEEKLVSATDRRKTLEYRL
FQSLRDTVAEARPRVLFMADMLAHLDFWQSLADVARRNGWVRPDVHTGHD
IVIREGRHPVVEAMQGSASFVPNDLRMDEKRRLLLITGPNMAGKSTVLRQ
TAIICLLAQMGAFVPAREASIGIADRIFSRVGASDNLAQGQSTFMVEMME
TARILRQASKRSLVILDEIGRGTSTFDGMALAWAVVEELTRRAGGGIRTL
FATHYHEITSLEGRIPGVHNMNIAIREWNGDIVFLRRLVPGPADKSYGIE
VARLAGVPHSVVQRARELLADLERTRDAARGTNSAPSRQTLPGLDLPSKQ
EQVDTIVAPPPCSGVEHPLLVALRDIDTDDMTPLEALKRITEWKQLWGTT
REDRS
>DVU3051 mutT, mutator mutT protein
MRVVPVVAGILWRGDRFLAVCRPEGKPRAGAWEFPGGKVEPGETPEEALA
RELGEELGVRPLTASLWREVRHDYPELSVALRFYHVTRFEGEPFPHEGHG
LAWMTRTEALALPFLEADLELVADLPDRP
>DVU0282 mutY, A/G-specific adenine glycosylase
MHDNAPQHEYDAFAKALLDWFAAARRPLPWREHYTPYGVWISEIMLQQTQ
MERGVDYYLRWMERFPDVASVATAPEADLLKAWEGLGYYRRVRNLQAAAR
VIMEQHDGIFPDLPDAIRALPGIGPYTAGAIASIAFNHDVIAVDGNVERV
FSRVFDIDTPVREKTAATRIRMLTARTLPKGRARDFNQALMELGALVCRK
KPDCTACPVARFCESLHLGIPHERPVPGRRQPIVPLDVVSGVLVHEGRIF
VQRRPDTGVWAGFWEFPGGRIEPGETPEEAIIREFREETDFAVRPTDKLA
VIRHGYTTYRVVLHCYLLHIDASSRSAPPEHPVITAATDHRWATLADIDA
LTLPAGHRKLADLLAADLRFAGL
>DVU1224 nfo, endonuclease IV
MPLFGAHMSAAGGVSNAIRDIVEIGGEVLQLFTANQRQWTPKAPSEADVE
AFGRRRAAFGGPVFSHASYLINIANGDGAASAKAVEALVREFERCTALGV
DAVVLHPGAHLGAGRGTGILRAARNIDEVFDRCGGQTPVLLLENTAGQGT
CLGGDLNDLAEIIDASRHASQLGVCLDTAHAFGAGYALHTDEGYRRCMED
IEHGPGLAAVRLFHVNDSLVPCGSRKDRHTHIGEGQLGEAAFVRLLNDPV
FAMHPMVLETPKEDGHAADRRNLATLRRLARS
>DVU0496 polA, DNA polymerase I
MALKERLGFTQEPLWLMDGSAFIFRGFYAFQNMQRSDGFPTNALFIVTRI
LLRLLREEKPRHFAFVLDGKGPTFRHDLFPLYKAQRAATPEPLVQQLEPI
RRMVTALGLPLEVSDGCEADDCIASLAARYRDERPVVIIGADKDLKQCLH
PNVVLWDPGAKEEKLTTLASFTAETGLTPAQWPDVQAVIGDTSDNIPGIP
GVGPKTASKIFADFPTLEDIRDGFDRLPPNLQKKFEQHLDAMFLYRQLTT
LAIDRCADLTPERLSVQPLDARTASTFLQEFELRALSRELAGMVRNGHVQ
VALPGDASAPMDTGAMAAPAAPSTPRPSDSGTPGSLFGEGGVPLPWDTDD
APRNDAEHTPAGATGAGGTLRGMPGTHTSQDDATAPAEAASRETGSPPAQ
SAIKAAPEAATDDASAKSAKGAKPVSEAQARKRALIQQASLFDQSTRRND
TVATCTDPRGLPPCQGRDIAVVPLCGDAARTCPPVSGTQNGSTSPVAFAV
AVAGCEVQYSGPVQGLARHLASAKRIATPDVKALLRSHAIWRDIPGDRWF
DLGLAAYLLDPEERDYGWPRLAARWGDMLDRSTDNPGLLALEMAQGMAGR
LAGASLDTLMRTLELPLVPVLADMEEAGIAVDRTAFAAFLDEVQHELDRI
TQEVYKAAGGQFNIRSAQQLGELLFGTLGLPTVGKTRGGQATTSQDALEK
LSGRHPVVDLILDFRKLEKLRSTYLEPLPKLVDAAGRIHSTFNQLATATG
RLSSSNPNLQNIPARGDLGRRMRSCFTAAEGNLLVSADYSQIELRVLAHM
SQDPTLLAAFREGADIHRRTAGLLYDTAPEDVTPDQRRNAKTINFGLIYG
MGPQKLGQELRITVNEAKQFIERYFSRLQHLRNFYDNVEAAAREQGHVTT
LAGRRRLLPEMHSENTQLRSQARRQAINTLIQGSAADIIKLAMLAAHDDP
VLHGLKARLILQVHDELMLEVPEANAQAAGERLALLMSEVRPGGVTLDVP
LLVDWGAGKDWGSAH
>DVU1284 priA, primosomal protein n'
MSERLFSVALTSPPYATLTYALPAWLQDTALSPGTRVIVPLGAGTLRVGV
VLGDDGNTVALPEGVTPKPLICPLDVEPCLNGDYLDMVRHLALRQGVTQG
RILGNLLPAGLRTSKVRLRLIDNGRKRLLKPRELAGLDKEVLQRLGQLWR
EGSFEVLVAGEDAAASEMCVLKADPPWPLRPSAHRQAAILDFLYERGTTS
RKVLTETLGTGCTTALGALLERGLVAIEAIDEASCACGISEASSTPLDAP
QTLVLTEEQSAAVGNFAAAMDAEGPATWVLYGITGSGKTAVYLELAKMCL
ARGRSVLLLAPEVALACKLRRDVANSLPEAPVVLYHGYQTPAVREATFRL
LATTRNQPRIIVGTRSALFLPVQDIGAVVLDEEHDSSFKQDEGLNYQAKE
VAWFRVGQSNGLLVLGSATPDLKTWHAAREGVLPAARLTSRVGGGTLPSV
ELVDIRSLGPTDGILAPATTAALGATLAKGEQAVILLNRRGYAPLMYCLD
CGTVARCPHCDIGLTYHKGRERLVCHYCGHSVAYPAVCPNCKGMHYLPMG
EGTERLEESIASFLPPGGRVLRLDRDSTRRQGRMEEILAAFAREEAQVLV
GTQMLSKGHHFPKVTLAVVADGDLGLNLPDYRASERTFQLLVQSSGRAGR
GELPGKVLIQTRDPGHYCWQYVLRGDYEAFFEHEIAIRQRRRYPPFVRLA
LVRMSYPVDCREGLAEVTSLAGELRRMGSQEGVQVLGPAPAPLPLLRGRK
RFNCLLKGADWLGLRRVYGAASGSVSHRHLSLSLDLDPVNML
>DVU1193 radC, DNA repair protein RadC
MSDKPHYHGHRERLRERLRVDGTGLRDYELLELLLGTVVLRRDTKPLAKE
LLHRFGSLRGVLDARTPELLSVKGFGPGLLDYWLLLRECMARYEESPARE
RKVLCTPQSVAEMARMRLGNCPHEEVWVALLDNQNRLIAWERATKGTVNA
SVIYPRDVLEMALRCSASGIILVHNHPGGNPVPSQPDFEVTRQLSRSALT
LGIRLLDHVIVTDEDCYSLKEDGLL
>DVU1090 recA, recA protein
MAKKPSLSPEEMRREALETALSTIERKYGLGAVMKLSDEAHVAIPVIPTG
SIGLDLALGVGGVPRGRVTEIYGPESSGKTTLTLHIIAEAQKRGGTAAFI
DAEHALDVAYARRLGVNTEELLISQPDFGEQALDIADMLVRSAAVDLVVI
DSVAALIPQAELEGSMGDTQVGGQARLMSHALRKLTGTIHKSRTAVIFIN
QIRMKIGTMGYGSPETTTGGNALKFYSSVRMDIRKIQTLKDKEEVYGSRT
RVKIVKNKVAPPFREALFDILYGTGISRTGEIIDLGSDAGIIDKSGSWFA
FGSERLGQGKENVRALLEENAPLREAIEAKLIEHLGMTPTKFASSGEEPA
NDEENDL
>DVU0904 recJ, single-stranded-DNA-specific exonuclease RecJ
MKRWIYRPEVEGALPPSASLAERLGISDLLLRLLLRRGLSSVQDMDVYLS
PQLRHLAPLEEWPGLAEAAGVITAGITAGMPFAVWGDYDVDGVTSTALVH
DVLEFHGVDVRHHLPDRRAEGYGLNVEWIERLAADGVRLLLTVDCGISDV
VPISRARELGMTVVVSDHHLPPEVLPPAHAICNPRLACCPCPALAGVGVA
FFVMAAVNAALGERSGRRYDMREVLDLVALGTLADVVDLGGQNRILVKNG
LLKIAEARRPGMAALKAVAGYNPSASLGAGQVVFGLAPRINAAGRLGEAE
MALQLLRARKHGEAAQLAQRLDAMNTDRRVEEDRILEEAKRQAESQAASR
MGFVLHGEDWHPGVIGIVASRIVEAYYRPTLILCTEGETLKGSGRSVSEF
DLHAGLSQCADLFLGFGGHRQAAGMSLKTSALDALRERFDTVVRQALGDT
PLTASLKLDGDLGFEHASDFTVLKELEMLQPFGTGNAEPVFASPPLLVRG
LRRFGKAREHVELELTDESCGVTLHAKAWRQSGEFSDRLRGTRIRLAYTP
RIDRYSGAASVDLRIRDWQPA
>DVU2463 recN, DNA repair protein RecN
MLEYLRIRDLALIEDMELEFSNGLNVLTGETGAGKSFILKALNFLTGDRL
GADMVRPGRDKAQVEALFMLPDGECIMRRELVAATGRSRLFINDALSSQD
AARDLRPSLIVHTSQHGQHKLLQPSFQAQLLDTYLQRPDLLERREATLRQ
LRDVAAQREALLERSRTLEEKRDVLEYQQREIERVAPEHGEEEQLETRRN
ELRDAASLLEGYEHGMALLRGGADGPGMVDLLGQLERQLDELSNLDDAFG
TDAEAARTYRDTLHDLERRLRRRPAIADPGERERIESRLFELSQLKRKLR
RSLDDILNLRDEIDENLSFLDACGLDIKRLEREEASLREQLKAVLDELTP
ARRLAAERLARDLESELAGLGFSEHVHVDFEFSPTEAWPGCPEEKARLLW
VPNPGQAPQPLDRIASGGELSRFLLAVVGLMSQGETATLIFDEVDAGVGG
LTLHRVADRLESLALHRQVLCITHWPQIAARAARHFQIRKEVTDGATSTL
CARLEGEAIRDELARMAGGGTEGQALADGLAAQNTHEGS
>DVU3200 recR, recombination protein RecR
MQRLPEPLKALVDQLAKLPGLGPKSALRLAMTLLKWPASETRRLGRGIHD
LRDNLHLCRRCGALTDCDPCALCTDATRTQDMLCLVSEWDSMLTLEEGGF
YRGQYLILGGLLAPLDNVNADSLELERLTRRLAEGQVREVVLALGTTVEA
ENTATFIRAMVERQYPGVRVTRLAQGIPLGAEVKFMDRETLRQSMQYRQE
L
>DVU1982 rhlE, ATP-dependent RNA helicase RhlE
MTFADLSLSPRLLAALDGMGYRQPTPVQRGAIPPALAGEDVLALAATGTG
KTAAFVLPMLQRLMDGPRGAVRALVVAPTRELAEQTHDHVRRLGSMSRLR
STTIYGGVGVVAQALRLRAGVEVVVGCPGRLLDHIRRGNLDLSSLEVLVL
DEGDSLFDLGFLADVRMLLGMVPATCQRMLFSATMPDAVRVLAAEALRQP
VTVQVDAVQPASTVHHALYPVPAHLRTPLLKTFLRSGPEGSVVVFVRTRH
GARRLWQQLDNVGFSVTCLQGKLSQRRRLAALEGFRDGRYDVLVATDVAA
RGLDISQVTHVVNYDVPSTADAYIHRVGRTGRAARNGTAMTFVTPADEAQ
VRNIERVLGTVIPRERLADFDYGAPVRGPEGARPAMPPRQPRLPAGKRPA
APQEAQEQPRRGRPRPPRHAVPPAAHPPTIPSRLPRQTPAGAEQVDLVRS
SRMRGQGGDSDE
>DVU0689 rnhA, ribonuclease HI
MSQFDVTVFTDGSCLGNPGPGGWAAIMRCNGCEKELSGGFALTTNNRMEI
LAVLEALEALRDPCKVTLFTDSQYVRNAVEKKWLAGWQRNGWKTADKKPV
KNRDLWERLVPLLAKHSVSFRWVRGHSGHPENERCDVLARAQASRRGLPE
DPGFTA
>DVU0834 rnhB, ribonuclease HII
MPPRPQRLAPVADLPPVFAGIDEAGRGCLAGPVVAAAVILPQEYALPGLT
DSKKLTAARRESLAEGIRSCAVTWGIGVVWPRDIDRINILQATFRAMARA
VRVLRQPPPAILIDGDKTLPPHVLTSLSCDGHLPTQRAIIGGDGCIPAIS
AASILAKTFRDRLMDTLDRRYHGYGFAKHKGYGTAEHLAAIAAHGPCAQH
RLTFRGVRPNPAAEEQLTLW
>DVU2256 ruvA, Holliday junction DNA helicase RuvA
MIAYVEGRLAEVAGNACVVVTDGGVGYEVFVPGHTLARLPDKGGRVSFFI
STEVREDALELYGFATWDERQTFIVLTSISKVGAKTGLAILSQFRPDDLR
RLVVEDDVLALTRVSGIGKKTAQHIFLELKYKLKVEDLPAAAPLVTGGAP
GGVFRDALAGLANLGYGEEEASHVLKDVLHGEPDLDVGGALRAALRALAR
GR
>DVU2255 ruvB, Holliday junction DNA helicase RuvB
MTANVCLDESVRPRLLDDFIGQDELRANMRVYLDAARERGQAMDHVLFYG
NPGLGKTTLAQIMAGELGVNLVSTSGPVLERSGDLAAILTNLGRHDLLFV
DEIHRMPIAVEEVLYPAMEDFKLDLVIGQGPGARTVKIDVEPFTLVGATT
RIGLLSSPLRDRFGIISRLEYYTPADLARIVARTARIIGANLTEEGAIEI
GRRARGTPRIANRLLRRVRDFATVHAGGVISADLASEALGRMEVDESGLD
QMDRKLLEVLIEHYGGGPVGIKTLAVACAEEVRTIEDIYEPYLIQCGFLK
RTPRGRVATAKAYRHLNLLG
>DVU2258 ruvC, crossover junction endodeoxyribonuclease RuvC
MAASVTVIGIDPGSQCTGWGIVREASGVLTLVDCGAIRPKGGDFAARLGD
LYRQLADVVRAHTPDEAAVEDVHAAQNVATALKLGQARGVVVAACAAHGV
PVIDYRPSVIKKALVGTGRAEKEQVGYMVGQVLGVRPDWKLDTGDALAAA
ICHLNQRRLTRLAGLA
>DVU2222 ssb, single-strand binding protein
MLNKVMIIGRLGRDPELRYAQNGTPIANLRIATDESYVDREGNKVDRVEW
HTVVVFQRAAENCANFLGKGSLVFVEGSLQTRKWQDQQGQDRYSTEIKAQ
RVQFLDRRGEAAQQGEDGGSPRRSFNPTGGRGGQSGQGGQGGRQQNRNND
MGNQAYDDDLGPAFPSEASGMDDVPF
>DVU0356 tag, DNA-3-methyladenine glycosylase I
MTEPFRCPWARSPEEVLYHDTEWGVPSRDDRVHFEFLILEAAQAGLSWLT
VLRKREGYRRAFAAFDPEAVARFGPADVARLMADAGIVRNRLKIESAIHN
AGPFLRLAERHGSFAAWLWDFVDGRPVDGRRESLADVPATTPLGEKVSRA
LKAEGFRFVGPTVVYAHLQATGLVNDHLVTCFRHEAVAGLA
>DVU3389 topA, DNA topoisomerase I
MGKDLIIVESPAKVKTIKKFLGGKYVVQASVGHVRDLPTNEIGVDEANNF
APQYRVIDGKQKVVDTLREAAAKADTVYLAPDPDREGEAIAWHVAALIEG
KADNIKRIQFNEITARAVREALENPRDLNRALFDAQQARRVLDRLVGYKL
SPLLWKKVKRGISAGRVQSVALRLIVDRESERRAFTPEEYWLFRAMFAKN
VPGATPTSPDPQYAPFKAELAKIDGKKAHVADADAANALEDAMRGKPFVI
TAVERKKRERQPQPPFITSTLQQAANQRLGYSAKRTMNIAQRLYEGVELG
EMGTVALITYMRTDSVRVSDEARDAARAFVTETWGADFCPAKPRQFKTKG
SAQDAHEAVRPVDVNVTPDSVKHLLPPDQFQLYRLVWSRFVASQMAPARF
DDTTVAIACGPAEWRAKGERMLFPGFLAAMPQKEEGDAELPPLQEGETLH
PVSVEKEQKFTQPPARYTEASLVRELEERGIGRPSTYASIISTLIDRDYT
RLEDKHFVPTDLGATVCDLLARHFTTLMDVGFTAQMEDSLDKVAEGGLDW
VELLSRFSADFNPTLESAAKAMETVKGGLPTDVTCPECGKPVVVKFGKAG
PFLACTAYPDCKFTSNFSRDEKGDIVIEQRAREELEAVGTCPECGKDLVV
KKARTGSRFIACTGYPDCRHTEPFSTGIACPREGCDGQLVEKSSKRGKIF
YSCNRFPKCDYALWDWPVPGPCPVCGSPLLVKKSTRAKGLHIACPEKTCR
YTQELPDDEG
>DVU2316 topB, DNA topoisomerase III
MSKTLIIAEKPSVAREIAPLVGAQGRRAGYLEGPDHLVSWAVGHLVGIAE
PEEQDEAWAGRWTLEQLPMLPPRFQLRVLPETADQFSVLQRLLLDDRVTG
IVNATDAGREGELIFRRIYLVAGCDKPVRRLWASDMTEEGLRKSLARLLP
DEEKRNLGLAAFARAEADWLVGMNFSRLFTVKSGGLVSVGRVQTPVLCLL
ADRRRDIEHFTPQDFWTVEATFDKNLDAGTSTGTRPMTSPAARSTVPCLA
ESGPATGDAPPAPDGDRTTQSEAQTDEGTKPDAQADALSDASSAAPATSA
PDTPVASDVPDAEIAAPEAAANDDRFRGVWHRPPDRRETRVDSGEEADAI
ATACTGKLGIVESVQGRAGTQQPPLPFDLTTLQREANTRFGYSAKDTLTH
AQSLYETRKLITYPRTDSRHLTKELFGEILNHLRAVHHLYPEETMLAVGR
IKSGKARFACVDDRKVTDHHAIIPTARKGNLTQLSAPERNIYDMVCRRTI
AAFCPEAKFSTSTVTVMVGEHPFIAKGKVFKDKGWMVVEPWRTAEDTPLP
QLRKGSKLLTLDVGPVKRQTKAPAHFTDASLLAAMETAGRLVEDDALRQA
MKERGLGTPATRAQVIETLVARGYVAKQGKKLVATDRGMQVAETVTTLLP
DVASPELTGQWEKRLKDIEAGADSYPAFMRSIRESVWHGVHRIRNRDIRP
LLRDIAARNSRPPDGRCPLCGGDVVETPRGFACKGDSKGKTEGDSTAARC
PFIIWKEMHGKAMDEDIVRELLAKGRTAEAFDLTSRQGKSFRAHLVLEGG
RVGLDFVRDRTPFRRDEDPQRTVHATGARPAAVPDVDTTSDAHPGADDAS
APLTESSHAEGG
>DVU2906 umuC, umuC protein
MHGPPESQEPCGTFGPDETTGATSTAASRGEARRLPRGGVLWALVDCNNF
YASCERLFRPDLKGRPVVVLSNNDGCVIARSAEAKALGVPMGAPEFKVRD
MLRAHDVAVFSSNYALYGDLSQRVMRTLATVVPRVEVYSIDEAFIPLPAA
LAADPVAVGRTLRQRVAQWVGIPVSVGVGPTRTLAKLANRLSKQDSAYGN
VFDLTPETVDMDRVLASVDVGDVWGVGRRSAEMLRGRGILTARALRDADP
LWVRQRMTVTGWRTQQELRGMPCLTDDDLPVPRRSIRSSRSFGQMVRTLE
PLREAVATFTARAVAKARAEGLVASCIEVHIRTPRHTERPRYDETTTITL
PCPTADTGLCIRHALTGLERIFREGYLYAKAGVTLFGLEPAAGRQGSLLD
LLDGSHEHKARRERLMAALDAVNLRHGRGSIRHGAEGDPGAAWHMSQKYR
SPRYTTAWEELPEVLCR
>DVU0393 ung, uracil-DNA glycosylase
MRDPLAGTGWLEAVPLLGDGAHLEVFSRVEALRRKGRVVYPPSGQVFAAL
RATPWDRVRVVVLGQDPYHGEGQAHGLAFSVPEGVPAPRSLRNVFREIET
DLGHASDEGKKRHADALPEKTAAGHDGGGLRPPSTDLTRWARQGVLLLNT
VLTVEAGQAHSHARLGWQEVTAAVVEALGRCPRPMAFLLWGRHAAAYGEG
LAAHHLVLHAAHPSPLSAFRGFFGCRHFSQVNTWLRARGLDPIEW
>DVU1987 uvrA, excinuclease ABC, A subunit
MSKHCIHIEGARQHNLKNVDIDIPRDELVVVCGPSGSGKSTLAFDIVYAE
GQRRYVESLSAYARQFLPQMDKPAVDKIEGLSPAISLEQQTSTRNPRSTV
GTVTEVYDFLRVFYARLGRMYCPQCGRPIEARAADEIIADILALGEGTRC
IIMAPLVEHQKGTHADRFKKLKAEGFVRVRVNGETTTIDDVPPLDKNRKH
CIDLVVDRIVVKEGIRGRLADSVELALRYGNGRLVVEVPGQGETVHSTES
VCPSCRISLPAPSPQLFSFNSPQGACPHCSGLGSVDYFEPALLAPNRGLS
LNTGALLPWKNPRVFARWQADLEKLAKRFGVTLSTPLSAWPAAGLEVLFH
GDGSLPHAAAGDEGSGGGADTRKKGRRGADEAFGPPTGWSGVTQLLESGM
QYGDAWRDEMSRYRQSRPCPACHGARLRPEALSVRVDDLDIHSFCSLSVA
RALAWLRERSFDGRHTLVAEPLLKELTHRLEFMVNVGLDYISLGRNMSTL
SGGEAQRIRLASQLGSGLVGVTYVLDEPSIGLHPRDNERLIRTLRRLQQR
GNTVLVVEHDEATIREADTVIELGPGSGALGGEVVFSGRVPDLLGTADTL
TARYLRGEMTIPLPESRRKGDGALTLRGVTTNNLQGLDCSIPFGVLTCVT
GVSGSGKSSLVVDTLYKHVALARGIKVDSPGSIGGIDGLDRIERIVAIDQ
TPIGRTPRSNPATYTKIFDEIRDIFAMTADARKRGYKPGRFSFNVRGGRC
EACGGDGQLRVEMHFLPDVFVTCDVCKGRRYNHETLEVRYKGLNIAEVLD
LTVRQARQFFENYPVLERRLGVLEDVGLEYLRLGQPATTLSGGEAQRIKI
SRELGKRSLPGTLYILDEPTTGLHMHEVGKLIRVLHQLVDRGATVVVIEH
NTDVILSSDHVIDLGPGGGENGGRIVSAGTPEEIIADSASVTGAFLVQER
AIRNGG
>DVU1605 uvrB, excinuclease ABC, B subunit
MADTCFRLHTEFEPTGDQPEAIGQIVANLGHGVRDQVLLGVTGSGKTFTV
ANVIAACNRPALILAPNKTLAAQLYNEFRALFPDNAVEYFVSYYDYYQPE
AYVPASDTYIEKDSSINDNIDKLRHAATHALLTRRDVVIVASVSCIYGLG
SPEYYARLVIPVECGQRFSMDALMTRLVEVQYQRNDFDFHRGTFRVRGDV
LEVIPAYHHERALRIEFFGDDIDAISEIDPLTGEVLGSVGKTVIYPASHY
VSDRDNLVRAMSDIRDELGERLREYQSANRLVEAQRLEQRTMLDLEMMEE
LGYCNGIENYSRHLDGRAAGQPPSCLLDYFPDDFLLFVDESHITVPQVGA
MYKGDRSRKSTLVDFGFRLPSALDNRPLEFAEFLTRINQTVYVSATPGKW
ELDRSQGVIAEQIIRPTGLVDPVVEVRPTRGQVDDLLAECRARAARDERV
LITTLTKRMAEDLTEHLGNMGLSVRYLHSDIDTMERMAIIQALRRGECDV
LVGINLLREGLDIPEVSLVSILDADKEGFLRSTGSLIQTFGRAARNAAGR
VILYADTVTASMRAAMDETARRRERQQAWNEANGIEPRTIRKSLDTPFDA
IYSAASEGGKGKGRGRGRQAAPAVENVAEYGTSPEDMAKHIQKLEREMRE
AAKELEFERAATLRDRIRLLRERLIEA
>DVU0801 uvrC, excinuclease ABC, C subunit
MPTAVEPLTPSPAPMERPDLSTIPLTPGVYLYKDESGRIIYVGKARCLRR
RVASYFRDVSALTPKTVAMLRHAVTIDTLSTTTEKEALLLEASLIKKHRP
RYNIVLRDDKQYVLFRIGAKHPYPRLEIVRKARRDDGRYFGPFTSASAAR
ETWKTIHRAFPLRRCSDRAFGNRVRACLYHHMGQCLGPCVNEVPSETYAA
LLEQVSLLLSGRSGELVDALRTEMEAASQGLDFERAAVLRDRIRALERTV
ERQAAVLPGGGDLDVVGVVEVENGLALGVLFVRQGVLLDGRSFFWPGLGF
AEAPELLWSFLGQFYGPQATIPPRIVVPWLPDEDGETGDALDGSSDAVVP
VAAATTIDASLADVRTGTEVTSLINASHAAPNVGESTQGDTLAGATGKGA
THLMLETALAALRGGIVRIALPRNPAENRLVDMAMSNAREEARRKADTPL
QDLLARALHLAGPPHRIEAVDVSHTGGRNTRVGMVVFEDGKPFPEAYRTY
AFEDGDGDDYGTLAAWAGRRVESGPPWPDLLLVDGGRGQLAAVVRAFEEC
GMGAAFAVASIAKARTEEGRADRRAGNVSDRIFLPGRANPLPLRAGAPEL
LFLQHVRDTVHDYSIGKHRRARAGAALTGELQRVEGIGPATARALWERFD
SLQAMADAGVEGLAAVPGVGRARAAALHAHLVTFFGSSKQGGHARTALQR
KG
>DVU1346 xseA, exodeoxyribonuclease VII, large subunit
MSRVFTVRELTRAIRDAIEGGFPYVWVQGQVSNLSRPSSGHLYFTLKDEE
AALNCVWFRGSQRDAETFDPLTGEVFEDGPRPGLSRTVRNGQELLCAGRL
TVYAPRGGYQLVVEMAQDAGLGRLHLAFEELKRRLSAKGYFAVERKRPLP
RSPRRVAVVTAPRGAAIHDFLRIAGERGVGCEIRIHPVPVQGAEAPPRIA
AAIAEAGRLGCAEVIVVIRGGGSLEDLWAFNDEAVADAIYASPVPVLAGV
GHEVDFTMADMTADVRAATPSHAAQLLWRERREFVQGLDELEMRLSRAFD
RAFTTGEGRLAALERALGWLSPVRALDRYDERFAESASRLARAWEAGSRL
RSQRVEQLVAALRHSFGPEALEKRQARLQTLHASLIHAGQTQLNTVERRV
ENLGVRLAALDPEAPLQRGYSLVRGPDGRFLKSIREAAPGQRLDIVLHDG
EVGTVVTSVRERDDV
>DVU1348 xseB, exodeoxyribonuclease VII, small subunit
MAGRKKAADFEQQLARLQEIVDALEGGDLPLEKSVALYKEGLGLARASRE
QLAKARNEIRLFTEGEVRDFDPEEGDDGDDR
>DVU3259 xth, exodeoxyribonuclease III
MRYRLVSWNVNGFRAVSSKPEWNWFSTTTADVVALQETKADPAQVGEEHR
SPDGWHAWWLPATVKKGYSGVAVFSRHTPLDVAYDLPDERFRGEGRCLHL
TFPEFHFFNIYFPNGGMGEERLRYKMGYYEAFLEHAETLRRDRPIVVCGD
FNTAHRPIDLARPKENETVSGFLPEERAWMDRFVAAGYVDTFRHVRGDEA
DRYSWWSYKTRARARNVGWRIDYFFVSEELRGAVRDAWIEMDVMGSDHCP
VGLELEV