Gene list
Applied filters:
Gene type: CDS
Gene type: CDS
Genomic element: small plasmid
Number of genes found: 60
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Pseudomonas syringae pv. phaseolicola 1448A, 1448A; BAA-978 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | PSPPH_B0047 | conserved hypothetical protein | small plasmid | CDS | 40074 | 639 | + | 0.478873 |
NA | PSPPH_B0035 | conjugal transfer protein | small plasmid | CDS | 28015 | 1401 | + | 0.62384 |
NA | PSPPH_B0052 | conserved hypothetical protein | small plasmid | CDS | 46249 | 384 | - | 0.596354 |
NA | PSPPH_B0042 | killer protein, putative | small plasmid | CDS | 35558 | 363 | + | 0.628099 |
NA | PSPPH_B0048 | conserved hypothetical protein | small plasmid | CDS | 40745 | 387 | - | 0.516796 |
NA | PSPPH_B0020 | major facilitator family transporter | small plasmid | CDS | 17001 | 1359 | + | 0.468727 |
NA | PSPPH_B0059 | exeA-like protein | small plasmid | CDS | 50287 | 972 | + | 0.61214 |
NA | PSPPH_B0044 | hypothetical protein | small plasmid | CDS | 38140 | 288 | + | 0.576389 |
NA | PSPPH_B0058 | site-specific recombinase, phage integrase family | small plasmid | CDS | 48636 | 1662 | + | 0.616125 |
NA | PSPPH_B0046 | TraL | small plasmid | CDS | 39151 | 915 | + | 0.503825 |
NA | PSPPH_B0056 | DNA-damage-inducible protein | small plasmid | CDS | 47606 | 294 | - | 0.602041 |
NA | PSPPH_B0034 | conjugal transfer protein | small plasmid | CDS | 27219 | 810 | + | 0.602469 |
NA | PSPPH_B0002 | Replicase family family | small plasmid | CDS | 304 | 1314 | + | 0.61035 |
NA | PSPPH_B0014 | ISPsy18, transposase | small plasmid | CDS | 11206 | 1260 | + | 0.560317 |
NA | PSPPH_B0011 | conserved hypothetical protein | small plasmid | CDS | 7035 | 642 | + | 0.593458 |
NA | PSPPH_B0017 | site-specific recombinase, phage integrase family | small plasmid | CDS | 13780 | 960 | - | 0.634375 |
NA | PSPPH_B0049 | possible relaxosome component | small plasmid | CDS | 41522 | 351 | + | 0.507123 |
NA | PSPPH_B0055 | addiction module toxin, RelE/StbE family | small plasmid | CDS | 47338 | 282 | - | 0.595745 |
NA | PSPPH_B0018 | transcriptional regulator, GntR family | small plasmid | CDS | 14998 | 702 | + | 0.508547 |
NA | PSPPH_B0039 | hypothetical protein | small plasmid | CDS | 31164 | 2391 | + | 0.578837 |
NA | PSPPH_B0012 | hypothetical protein | small plasmid | CDS | 8630 | 303 | + | 0.488449 |
NA | PSPPH_B0037 | conserved hypothetical protein | small plasmid | CDS | 30466 | 357 | + | 0.596639 |
NA | PSPPH_B0005 | transcriptional regulator, Cro/CI family | small plasmid | CDS | 3873 | 297 | - | 0.521886 |
NA | PSPPH_B0050 | relaxase, putative | small plasmid | CDS | 41862 | 3744 | + | 0.580128 |
NA | PSPPH_B0038 | hypothetical protein | small plasmid | CDS | 30947 | 234 | + | 0.538462 |
NA | PSPPH_B0028 | conjugal transfer protein | small plasmid | CDS | 21475 | 2553 | + | 0.581669 |
NA | PSPPH_B0060 | transcriptional regulator, GntR family | small plasmid | CDS | 51401 | 204 | + | 0.598039 |
NA | PSPPH_B0030 | conserved hypothetical protein | small plasmid | CDS | 24773 | 324 | + | 0.450617 |
NA | PSPPH_B0053 | conserved hypothetical protein | small plasmid | CDS | 46617 | 327 | - | 0.620795 |
NA | PSPPH_B0036 | conjugal transfer protein | small plasmid | CDS | 29425 | 1032 | + | 0.580426 |
NA | PSPPH_B0041 | conjugal transfer protein | small plasmid | CDS | 33866 | 1653 | + | 0.571083 |
NA | PSPPH_B0045 | single-strand binding protein | small plasmid | CDS | 38451 | 567 | + | 0.587302 |
NA | PSPPH_B0013 | conserved hypothetical protein | small plasmid | CDS | 9023 | 1428 | + | 0.530112 |
NA | PSPPH_B0015 | prevent-host-death family protein | small plasmid | CDS | 13126 | 279 | + | 0.501792 |
NA | PSPPH_B0054 | putative TnpA repressor protein | small plasmid | CDS | 46967 | 336 | - | 0.571429 |
NA | PSPPH_B0007 | conserved hypothetical protein | small plasmid | CDS | 4604 | 309 | + | 0.540453 |
NA | PSPPH_B0009 | ParA family protein | small plasmid | CDS | 5774 | 654 | + | 0.501529 |
NA | PSPPH_B0057 | resolvase, putative | small plasmid | CDS | 48080 | 576 | + | 0.618056 |
NA | PSPPH_B0019 | conserved hypothetical protein | small plasmid | CDS | 15775 | 1197 | + | 0.480368 |
NA | PSPPH_B0033 | conjugal transfer protein | small plasmid | CDS | 26441 | 789 | + | 0.585551 |
NA | PSPPH_B0023 | transcriptional regulator | small plasmid | CDS | 18999 | 750 | + | 0.513333 |
NA | PSPPH_B0001 | hypothetical protein | small plasmid | CDS | 134 | 174 | + | 0.574713 |
NA | PSPPH_B0051 | transcriptional regulator, GntR family | small plasmid | CDS | 45733 | 273 | + | 0.589744 |
NA | PSPPH_B0026 | conjugal transfer protein | small plasmid | CDS | 20787 | 339 | + | 0.610619 |
NA | PSPPH_B0024 | conserved hypothetical protein | small plasmid | CDS | 19738 | 312 | + | 0.560897 |
NA | PSPPH_B0006 | conserved hypothetical protein | small plasmid | CDS | 4154 | 300 | - | 0.506667 |
NA | PSPPH_B0008 | conserved hypothetical protein | small plasmid | CDS | 4964 | 417 | + | 0.541966 |
NA | PSPPH_B0027 | conjugal transfer protein | small plasmid | CDS | 21138 | 489 | + | 0.562372 |
NA | PSPPH_B0031 | conjugal transfer protein | small plasmid | CDS | 25107 | 936 | + | 0.537393 |
NA | PSPPH_B0029 | conjugal transfer protein | small plasmid | CDS | 24024 | 687 | + | 0.576419 |
NA | PSPPH_B0010 | hypothetical protein | small plasmid | CDS | 6516 | 252 | + | 0.551587 |
NA | PSPPH_B0025 | conjugal transfer protein | small plasmid | CDS | 20077 | 714 | + | 0.596639 |
NA | PSPPH_B0032 | conjugal transfer protein | small plasmid | CDS | 26101 | 303 | + | 0.643564 |
NA | PSPPH_B0040 | hypothetical protein | small plasmid | CDS | 33579 | 288 | + | 0.59375 |
NA | PSPPH_B0021 | conserved hypothetical protein | small plasmid | CDS | 18404 | 198 | + | 0.368687 |
rulA | PSPPH_B0003 | ultraviolet light resistance protein A | small plasmid | CDS | 1757 | 426 | + | 0.544601 |
rulB | PSPPH_B0004 | RulB protein | small plasmid | CDS | 2175 | 1284 | + | 0.562305 |
topB2 | PSPPH_B0043 | DNA topoisomerase III | small plasmid | CDS | 35948 | 2166 | + | 0.611727 |
txe | PSPPH_B0016 | addiction module toxin Txe | small plasmid | CDS | 13376 | 303 | + | 0.50165 |
xre | PSPPH_B0022 | transcriptional regulator, PbsX family | small plasmid | CDS | 18615 | 357 | - | 0.464986 |