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2024-04-16 23:58:25

Gene list

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Organism: Pseudomonas syringae pv. maculicola, ES4326

Number of genes found: 165

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas syringae pv. maculicola, ES4326
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PMA4326B10 integrasepPMA4326B CDS10750 1659 + 0.584087
NA PMA4326B17 stability/partitioning determinantpPMA4326B CDS21261 324 + 0.487654
NA PMA4326B20 ISPssy transposasepPMA4326B CDS26316 969 - 0.545924
NA PMA4326A28 hypothetical proteinpPMA4326A CDS22897 234 + 0.461538
NA PMA4326A36 hypothetical proteinpPMA4326A CDS29219 267 + 0.543071
NA PMA4326A12 hypothetical proteinpPMA4326A CDS9618 1032 - 0.506783
NA pPMA4326A misc_feature39285 9 + 0.666667
NA PMA4326A11 hypothetical proteinpPMA4326A CDS9338 204 - 0.534314
NA pPMA4326E stem_loop867 27 + 0.740741
NA PMA4326E04 hypothetical proteinpPMA4326E CDS2599 225 + 0.364444
NA pPMA4326E stem_loop923 28 + 0.785714
NA pPMA4326D stem_loop1094 27 + 0.444444
NA PMA4326A17 IS1406 transposasepPMA4326A CDS14012 978 + 0.575665
NA PMA4326A10 IS222 transposase protein orfBpPMA4326A CDS8128 672 + 0.546131
NA PMA4326B07 IS801 transposase proteinpPMA4326B CDS7062 1230 - 0.606504
NA PMA4326A37 hypothetical proteinpPMA4326A CDS30074 1017 + 0.509341
NA MFA04 pPMA4326A pseudo37088 198 + 0.671717
NA pPMA4326A stem_loop46452 35 + 0.485714
NA MFB11 pPMA4326B pseudo32002 279 + 0.548387
NA pPMA4326A misc_feature4209 619 + 0.487884
NA PMA4326C08 hypothetical proteinpPMA4326C CDS6737 246 + 0.593496
NA MFB12 pPMA4326B pseudo37480 138 + 0.384058
NA pPMA4326B promoter19123 26 + 0.423077
NA pPMA4326B stem_loop39824 34 + 0.647059
NA MFB10 pPMA4326B pseudo30585 89 + 0.573034
NA PMA4326C03 hypothetical proteinpPMA4326C CDS1411 276 + 0.456522
NA pPMA4326A stem_loop12695 32 + 0.1875
NA MFB01 pPMA4326B pseudo3181 1561 + 0.586803
NA pPMA4326C stem_loop3666 44 + 0.522727
NA PMA4326A50 hypothetical proteinpPMA4326A CDS45136 921 + 0.57329
NA pPMA4326E stem_loop760 19 + 0.578947
NA PMA4326A20 pbsX-like transcriptional regulatorpPMA4326A CDS16524 351 - 0.512821
NA PMA4326B19 hypothetical proteinpPMA4326B CDS25979 141 + 0.496454
NA PMA4326A49 transcriptional regulatorpPMA4326A CDS44372 429 + 0.617716
NA pPMA4326C repeat_region105 21 + 0.428571
NA pPMA4326B promoter16169 26 - 0.653846
NA PMA4326A21 transcriptional regulatorpPMA4326A CDS17139 528 + 0.422348
NA pPMA4326D stem_loop4092 15 + 0.4
NA PMA4326B08 candidate type III effectorpPMA4326B CDS8608 723 - 0.543568
NA PMA4326B18 MFS sugar transporterpPMA4326B CDS23898 1416 + 0.602401
NA pPMA4326C repeat_region62 22 + 0.409091
NA PMA4326A44 hypothetical proteinpPMA4326A CDS38092 573 + 0.474695
NA PMA4326B03 stability determinantpPMA4326B CDS1816 201 + 0.567164
NA PMA4326A09 IS222 transposase protein orfApPMA4326A CDS7637 309 + 0.553398
NA PMA4326C02 hypothetical proteinpPMA4326C CDS1098 231 + 0.506494
NA pPMA4326D stem_loop1074 15 + 0.733333
NA PMA4326D01 hypothetical proteinpPMA4326D CDS1 183 + 0.612022
NA PMA4326A03 GNAT acetyltransferasepPMA4326A CDS1946 306 + 0.493464
NA PMA4326A46 relaxosome componentpPMA4326A CDS39444 726 + 0.486226
NA PMA4326A45 hypothetical proteinpPMA4326A CDS38683 420 - 0.504762
NA MFA03 pPMA4326A pseudo29919 90 + 0.588889
NA PMA4326E05 hypothetical proteinpPMA4326E CDS3612 204 - 0.647059
NA PMA4326B25 ISPssy transposasepPMA4326B CDS32371 978 + 0.548057
NA PMA4326B06 MFS sugar transporterpPMA4326B CDS5391 1419 + 0.59408
NA PMA4326E02 hypothetical proteinpPMA4326E CDS259 435 - 0.544828
NA pPMA4326B stem_loop16653 33 + 0.333333
NA pPMA4326C repeat_region84 21 + 0.428571
NA PMA4326E06 hypothetical proteinpPMA4326E CDS3812 231 - 0.614719
NA pPMA4326A stem_loop46411 34 + 0.647059
NA MFB02 pPMA4326B pseudo5094 163 - 0.521472
NA MFB05 pPMA4326B pseudo17513 360 - 0.563889
NA MFB09 pPMA4326B pseudo27442 193 + 0.611399
NA PMA4326A48 hypothetical proteinpPMA4326A CDS44072 156 + 0.551282
NA pPMA4326B stem_loop39865 35 + 0.514286
NA pPMA4326E stem_loop2910 23 + 0.608696
NA pPMA4326E stem_loop695 26 + 0.346154
NA PMA4326A04 hypothetical proteinpPMA4326A CDS3427 471 - 0.501062
NA PMA4326B24 ISPsy1 transposasepPMA4326B CDS30768 1074 + 0.536313
NA PMA4326D06 hypothetical proteinpPMA4326D CDS4455 231 - 0.649351
NA PMA4326A47 relaxasepPMA4326A CDS40159 3738 + 0.579187
NA MFB06 pPMA4326B pseudo21711 782 - 0.588235
NA pPMA4326D stem_loop725 26 + 0.307692
NA PMA4326A08 hypothetical proteinpPMA4326A CDS7102 363 + 0.465565
NA pPMA4326B promoter17091 26 - 0.576923
NA PMA4326B12 type III secreted effector hopPmaApPMA4326B CDS13610 2325 - 0.544516
NA pPMA4326D stem_loop783 21 + 0.52381
NA PMA4326A13 hypothetical proteinpPMA4326A CDS10727 921 - 0.500543
NA PMA4326A35 hypothetical proteinpPMA4326A CDS28493 366 + 0.598361
NA pPMA4326B stem_loop19084 26 + 0.5
NA pPMA4326C misc_feature127 9 + 0.444444
NA pPMA4326E stem_loop3355 37 + 0.567568
NA pPMA4326D rep_origin3543 629 + 0.575517
NA pPMA4326A misc_signal7894 8 + 0.25
NA PMA4326A42 single-stranded binding proteinpPMA4326A CDS36474 561 + 0.609626
NA pPMA4326B misc_feature9898 299 + 0.478261
NA PMA4326B09 resolvasepPMA4326B CDS10161 606 + 0.511551
NA pPMA4326D misc_feature1184 622 + 0.493569
NA PMA4326A07 hypothetical proteinpPMA4326A CDS6160 426 + 0.603286
NA pPMA4326C stem_loop3719 23 + 0.478261
NA PMA4326A22 hypothetical proteinpPMA4326A CDS17732 216 + 0.421296
NA pPMA4326C rep_origin1 135 + 0.444444
NA PMA4326E01 hypothetical proteinpPMA4326E CDS1 135 + 0.6
NA pPMA4326B misc_feature16247 203 + 0.517241
NA PMA4326C05 hypothetical proteinpPMA4326C CDS2431 306 + 0.401961
NA pPMA4326A stem_loop39344 27 + 0.555556
NA PMA4326A06 hypothetical proteinpPMA4326A CDS5804 324 + 0.506173
NA PMA4326A18 hypothetical proteinpPMA4326A CDS15338 387 - 0.462532
NA PMA4326D05 hypothetical proteinpPMA4326D CDS4279 180 - 0.655556
NA MFA01 pPMA4326A pseudo2630 462 + 0.556277
NA pPMA4326E rep_origin2846 628 + 0.546178
NA PMA4326D04 hypothetical proteinpPMA4326D CDS3297 225 + 0.36
NA pPMA4326D stem_loop3610 20 + 0.65
NA MFB08 pPMA4326B pseudo25401 495 + 0.567677
NA PMA4326D02 hypothetical proteinpPMA4326D CDS237 423 - 0.617021
NA pPMA4326C repeat_region1 20 + 0.2
NA pPMA4326D stem_loop1003 17 + 0.941176
NA PMA4326A05 hypothetical proteinpPMA4326A CDS4895 420 + 0.6
NA PMA4326A40 topoisomerasepPMA4326A CDS33730 2166 + 0.608495
NA pPMA4326A stem_loop15260 26 + 0.576923
NA pPMA4326E stem_loop1057 29 + 0.275862
NA pPMA4326B stem_loop28970 36 + 0.305556
NA pPMA4326C misc_feature5271 622 + 0.622186
NA MFB07 pPMA4326B pseudo22809 890 - 0.592135
NA PMA4326A15 stability/partitioning determinantpPMA4326A CDS12794 654 + 0.484709
IS1406 pPMA4326A repeat_region13925 1211 + 0.569777
IS222 pPMA4326A repeat_region7575 1231 + 0.547522
IS801 pPMA4326B repeat_region6882 1765 + 0.582436
IS801 pPMA4326B repeat_region3001 2096 + 0.569656
ISPssy pPMA4326B repeat_region26171 1184 + 0.530405
ISPssy pPMA4326B repeat_region32301 1193 + 0.532272
ISPsy1 pPMA4326B repeat_region30689 1150 + 0.526087
PMA4326A41 hypothetical proteinpPMA4326A CDS35892 555 + 0.578378
PMA4326B05 hypothetical proteinpPMA4326B CDS2562 414 + 0.507246
PMA4326B13 hypothetical proteinpPMA4326B CDS18293 681 - 0.521292
PMA4326B14 hypothetical proteinpPMA4326B CDS19161 273 - 0.472527
PMA4326B21 hypothetical proteinpPMA4326B CDS27641 1125 - 0.562667
PMA4326B22 hypothetical proteinpPMA4326B CDS29010 474 - 0.468354
PMA4326B23 hypothetical proteinpPMA4326B CDS29708 783 - 0.605364
PMA4326B27 hypothetical proteinpPMA4326B CDS37215 201 + 0.517413
PMA4326B28 gntR transcriptional regulatorpPMA4326B CDS37785 429 + 0.617716
PMA4326B29 hypothetical proteinpPMA4326B CDS38549 921 + 0.57329
bip PMA4326A19 bacteriocin immunity proteinpPMA4326A CDS15966 471 - 0.377919
exeA PMA4326B11 exeA-like proteinpPMA4326B CDS12398 972 + 0.583333
kikA PMA4326A39 killer proteinpPMA4326A CDS33340 363 + 0.619835
mob PMA4326C07 mobilization proteinpPMA4326C CDS4400 2106 - 0.602089
mob PMA4326D03 mobilization proteinpPMA4326D CDS1758 1458 + 0.584362
mob PMA4326E03 putative mobilization proteinpPMA4326E CDS1167 1236 + 0.590615
mob PMA4326B26 mobilization proteinpPMA4326B CDS33565 3474 + 0.587507
parA PMA4326B16 stability/partitioning determinantpPMA4326B CDS20570 699 + 0.519313
parD PMA4326C09 putative stability determinantpPMA4326C CDS7339 201 + 0.557214
parE PMA4326C10 putative stability determinantpPMA4326C CDS7539 279 + 0.587814
parE PMA4326B04 stability determinantpPMA4326B CDS2016 294 + 0.510204
repA PMA4326C01 replication proteinpPMA4326C CDS174 855 + 0.493567
repA PMA4326B01 replication proteinpPMA4326B CDS1 1302 + 0.607527
repA PMA4326A01 replication proteinpPMA4326A CDS1 1311 + 0.601831
ssb PMA4326B02 single-stranded binding proteinpPMA4326B CDS1451 294 + 0.540816
ssb PMA4326A02 single-stranded binding proteinpPMA4326A CDS1514 288 + 0.53125
stbA PMA4326A14 stability/partitioning determinantpPMA4326A CDS11795 642 - 0.580997
stbA PMA4326B15 stability/partitioning determinantpPMA4326B CDS19527 636 - 0.578616
stbB PMA4326A43 stability/partitioning determinantpPMA4326A CDS37376 720 + 0.468056
virB1 PMA4326A23 VirB1pPMA4326A CDS17976 699 + 0.599428
virB10 PMA4326A33 VirB10pPMA4326A CDS26204 1212 + 0.608911
virB11 PMA4326A34 VirB11pPMA4326A CDS27425 1059 + 0.614731
virB2 PMA4326A24 VirB2pPMA4326A CDS18671 339 + 0.622419
virB3 PMA4326A25 VirB3pPMA4326A CDS19022 477 + 0.563941
virB4 PMA4326A26 VirB4pPMA4326A CDS19359 2553 + 0.580102
virB5 PMA4326A27 VirB5pPMA4326A CDS21908 687 + 0.576419
virB5 PMA4326C04 VirB5pPMA4326C CDS1754 657 + 0.526636
virB6 PMA4326A29 VirB6pPMA4326A CDS23141 933 + 0.540193
virB6 PMA4326C06 VirB6pPMA4326C CDS2736 927 + 0.472492
virB7 PMA4326A30 VirB7pPMA4326A CDS24141 315 + 0.653968
virB8 PMA4326A31 VirB8pPMA4326A CDS24492 789 + 0.583016
virB9 PMA4326A32 VirB9pPMA4326A CDS25270 810 + 0.616049
virD4 PMA4326A38 VirD4pPMA4326A CDS31626 1674 + 0.591995
yafA PMA4326A16 stability/partitioning determinantpPMA4326A CDS13469 339 + 0.466077