Gene list
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Organism: Pseudomonas sp. ND6, ND6
Number of genes found: 107
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| Pseudomonas sp. ND6, ND6 | ||||||||
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| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | ND077 | hypothetical protein | pND6-1 | CDS | 76934 | 306 | - | 0.558824 |
| NA | ND052 | probable ATP-dependent DNA ligase | pND6-1 | CDS | 53213 | 960 | - | 0.576042 |
| NA | ND071 | hypothetical protein | pND6-1 | CDS | 71388 | 984 | - | 0.551829 |
| NA | ND036 | hypothetical protein | pND6-1 | CDS | 37133 | 441 | - | 0.521542 |
| NA | ND075 | transcriptional regulator | pND6-1 | CDS | 74859 | 915 | - | 0.590164 |
| NA | ND031 | probable helicase | pND6-1 | CDS | 31343 | 1638 | - | 0.575092 |
| NA | ND011 | hypothetical protein | pND6-1 | CDS | 10704 | 543 | + | 0.593002 |
| NA | ND044 | hypothetical protein | pND6-1 | CDS | 43255 | 354 | + | 0.556497 |
| NA | ND051 | hypothetical protein | pND6-1 | CDS | 52273 | 546 | + | 0.582418 |
| NA | ND094 | hypothetical protein | pND6-1 | CDS | 91662 | 336 | - | 0.583333 |
| NA | ND037 | hypothetical protein | pND6-1 | CDS | 37546 | 477 | - | 0.51153 |
| NA | ND080 | putative transposase | pND6-1 | CDS | 78658 | 345 | - | 0.597101 |
| NA | ND025 | hypothetical protein | pND6-1 | CDS | 26226 | 396 | + | 0.590909 |
| NA | ND095 | hypothetical protein | pND6-1 | CDS | 91978 | 378 | - | 0.574074 |
| NA | ND039 | hypothetical protein | pND6-1 | CDS | 38666 | 768 | - | 0.576823 |
| NA | ND076 | putative dehydrogenase | pND6-1 | CDS | 76078 | 774 | + | 0.559432 |
| NA | ND074 | hypothetical protein | pND6-1 | CDS | 74118 | 561 | - | 0.629234 |
| NA | ND040 | putative DNA or RNA helicases | pND6-1 | CDS | 39452 | 339 | - | 0.563422 |
| NA | ND027 | unknown | pND6-1 | CDS | 27231 | 1050 | - | 0.632381 |
| NA | ND003 | hypothetical protein | pND6-1 | CDS | 475 | 369 | + | 0.544715 |
| NA | ND073 | hypothetical protein | pND6-1 | CDS | 72705 | 756 | - | 0.60582 |
| NA | ND092 | hypothetical protein | pND6-1 | CDS | 90626 | 510 | + | 0.627451 |
| NA | ND041 | hypothetical protein | pND6-1 | CDS | 40623 | 762 | + | 0.587927 |
| NA | ND009 | putative DNA helicase | pND6-1 | CDS | 6579 | 2082 | + | 0.550432 |
| NA | ND043 | probable peptidase | pND6-1 | CDS | 41692 | 777 | - | 0.550837 |
| NA | ND102 | putative integrase | pND6-1 | CDS | 101005 | 819 | - | 0.54823 |
| NA | ND099 | AGR-L-2007p integrase | pND6-1 | CDS | 97878 | 957 | + | 0.575758 |
| NA | ND021 | putative transporter protein | pND6-1 | CDS | 23037 | 897 | + | 0.573021 |
| NA | ND072 | hypothetical protein | pND6-1 | CDS | 72346 | 360 | - | 0.6 |
| NA | ND002 | hypothetical protein | pND6-1 | CDS | 278 | 228 | - | 0.539474 |
| NA | ND048 | hypothetical protein | pND6-1 | CDS | 47815 | 720 | + | 0.469444 |
| NA | ND028 | integrase-like protein | pND6-1 | CDS | 28422 | 1056 | + | 0.618371 |
| NA | ND049 | Lin2600 dehydrogenase | pND6-1 | CDS | 48696 | 1149 | + | 0.434291 |
| NA | ND070 | putative RNA polymerase | pND6-1 | CDS | 70258 | 438 | - | 0.579909 |
| NA | ND035 | hypothetical protein | pND6-1 | CDS | 36813 | 273 | - | 0.527473 |
| NA | ND042 | hypothetical protein | pND6-1 | CDS | 41338 | 288 | + | 0.59375 |
| NA | ND046 | hypothetical protein | pND6-1 | CDS | 44886 | 276 | + | 0.565217 |
| NA | ND045 | hypothetical protein | pND6-1 | CDS | 44082 | 450 | + | 0.511111 |
| NA | ND101 | hypothetical protein | pND6-1 | CDS | 100343 | 198 | - | 0.454545 |
| NA | ND038 | hypothetical protein | pND6-1 | CDS | 38117 | 357 | - | 0.509804 |
| NA | ND010 | NADH oxidase | pND6-1 | CDS | 9307 | 1401 | + | 0.600999 |
| NA | ND033 | putative exodeoxyribonuclease VII large subunit | pND6-1 | CDS | 34195 | 1479 | - | 0.610548 |
| NA | ND100 | hypothetical protein | pND6-1 | CDS | 99162 | 984 | - | 0.541667 |
| NA | ND001 | putative transposase | pND6-1 | CDS | 1 | 333 | - | 0.591592 |
| NA | ND030 | hypothetical protein | pND6-1 | CDS | 30573 | 792 | + | 0.59596 |
| NA | ND078 | transposase | pND6-1 | CDS | 77552 | 708 | - | 0.611582 |
| NA | ND069 | glutathione-S-transferase-like protein | pND6-1 | CDS | 69687 | 378 | + | 0.608466 |
| NA | ND029 | hypothetical protein | pND6-1 | CDS | 29663 | 588 | - | 0.532313 |
| NA | ND018 | hypothetical protein | pND6-1 | CDS | 19054 | 909 | - | 0.629263 |
| NA | ND026 | hypothetical protein | pND6-1 | CDS | 26826 | 285 | - | 0.508772 |
| NA | ND079 | transposase | pND6-1 | CDS | 78217 | 387 | - | 0.594315 |
| NA | ND065 | hypothetical protein | pND6-1 | CDS | 66043 | 414 | - | 0.647343 |
| NA | ND022 | lipoprotein signal peptidase | pND6-1 | CDS | 23937 | 513 | + | 0.504873 |
| NA | ND047 | putative DNA modification methylase | pND6-1 | CDS | 45547 | 1770 | + | 0.567797 |
| NA | ND034 | hypothetical protein | pND6-1 | CDS | 35862 | 855 | - | 0.576608 |
| IS1396 | pND6-1 | repeat_region | 24494 | 1325 | + | 0.595472 | ||
| IS222 | pND6-1 | repeat_region | 1 | 371 | - | 0.584906 | ||
| IS222 | pND6-1 | repeat_region | 100999 | 859 | - | 0.549476 | ||
| ISPsp1 | pND6-1 | repeat_region | 65363 | 406 | + | 0.571429 | ||
| ISPst1 | pND6-1 | repeat_region | 78673 | 581 | - | 0.590361 | ||
| areB | ND014 | benzyl alcohol dehydrogenase | pND6-1 | CDS | 13946 | 1134 | - | 0.597002 |
| atsA | ND019 | arylsulfatase | pND6-1 | CDS | 19934 | 1980 | - | 0.574242 |
| benK | ND017 | benzoate transporter protein | pND6-1 | CDS | 17544 | 1350 | - | 0.59037 |
| catA | ND015 | catechol 1,2-dioxygenase alpha chain | pND6-1 | CDS | 15119 | 939 | - | 0.610224 |
| chnR | ND012 | transcriptional activator | pND6-1 | CDS | 11424 | 930 | + | 0.564516 |
| cztO | ND024 | outer membrane porin precursor | pND6-1 | CDS | 25930 | 378 | + | 0.542328 |
| gst | ND066 | glutathione-S-transferase-like protein | pND6-1 | CDS | 66562 | 618 | + | 0.613269 |
| intA | ND050 | AGR-L-2007p integrase | pND6-1 | CDS | 50964 | 1260 | + | 0.573016 |
| mocA | ND068 | oxido-reductase/dehydratase | pND6-1 | CDS | 68639 | 1032 | + | 0.578488 |
| morB | ND067 | morphinone reductase | pND6-1 | CDS | 67191 | 1065 | + | 0.64507 |
| nahAa | ND053 | naphthalene dioxygenase reductase | pND6-1 | CDS | 54342 | 987 | + | 0.559271 |
| nahAb | ND054 | naphthalene dioxygenase ferredoxin | pND6-1 | CDS | 55472 | 315 | + | 0.507937 |
| nahAc | ND055 | naphthalene dioxygenase Fe-S protein large subunit | pND6-1 | CDS | 55857 | 1350 | + | 0.525926 |
| nahAd | ND056 | naphthalene dioxygenase Fe-S protein small subunit | pND6-1 | CDS | 57221 | 585 | + | 0.502564 |
| nahB | ND057 | naphthalene cis-dihydrodiol dehydrogenase | pND6-1 | CDS | 57826 | 828 | + | 0.521739 |
| nahC | ND059 | 1,2-dihydroxy-naphthalene dioxygenase | pND6-1 | CDS | 60179 | 909 | + | 0.542354 |
| nahD | ND062 | 2-hydroxychromene-2-carboxylate dehydrogenase | pND6-1 | CDS | 63246 | 639 | + | 0.472613 |
| nahE | ND061 | 1,2-dihydroxybenzyl pyruvate aldolase | pND6-1 | CDS | 62027 | 1005 | + | 0.546269 |
| nahF | ND013 | salicylaldehyde dehydrogenase | pND6-1 | CDS | 12452 | 1452 | - | 0.588154 |
| nahF | ND058 | salicylaldehyde dehydrogenase | pND6-1 | CDS | 58700 | 1452 | + | 0.570248 |
| nahG | ND091 | salicylate hydroxylase | pND6-1 | CDS | 89257 | 1305 | - | 0.638314 |
| nahG | ND016 | salicylate hydroxylase | pND6-1 | CDS | 16132 | 1290 | - | 0.610078 |
| nahH | ND089 | catechol 2,3-dioxygenase | pND6-1 | CDS | 87496 | 924 | - | 0.546537 |
| nahI | ND088 | hydroxymuconic semialdehyde dehydrogenase | pND6-1 | CDS | 86001 | 1461 | - | 0.661191 |
| nahJ | ND082 | 4-oxalocrotonate isomerase | pND6-1 | CDS | 81283 | 192 | - | 0.604167 |
| nahK | ND083 | 4-oxalcrotonate decarboxylase | pND6-1 | CDS | 81529 | 795 | - | 0.645283 |
| nahL | ND086 | 2-oxopent-4-enoate hydratase | pND6-1 | CDS | 84315 | 786 | - | 0.642494 |
| nahM | ND084 | 2-oxo-4-hydroxypentanoate aldolase | pND6-1 | CDS | 82320 | 1041 | - | 0.654179 |
| nahN | ND087 | hydroxymuconic semialdehyde hydrolase | pND6-1 | CDS | 85112 | 882 | - | 0.684807 |
| nahO | ND085 | acetaldehyde dehydrogenase | pND6-1 | CDS | 83372 | 924 | - | 0.656926 |
| nahQ | ND060 | dibenzothiophene oxidation protein | pND6-1 | CDS | 61331 | 648 | + | 0.493827 |
| nahR | ND098 | regulatory protein | pND6-1 | CDS | 96348 | 903 | + | 0.609081 |
| nahT | ND090 | chloroplast ferredoxin-like protein | pND6-1 | CDS | 88440 | 318 | - | 0.562893 |
| nahY | ND081 | naphthalene chemotaxis protein | pND6-1 | CDS | 79430 | 1617 | - | 0.519481 |
| parA | ND006 | ParA | pND6-1 | CDS | 2364 | 1185 | - | 0.534177 |
| parB | ND032 | chromosome partitioning protein | pND6-1 | CDS | 33635 | 384 | - | 0.515625 |
| parB | ND005 | ParB | pND6-1 | CDS | 1192 | 1017 | - | 0.556539 |
| parC | ND004 | ParC | pND6-1 | CDS | 757 | 321 | - | 0.548287 |
| parW | ND007 | ParW | pND6-1 | CDS | 3707 | 480 | - | 0.541667 |
| pbrR | ND020 | regulatory protein | pND6-1 | CDS | 22534 | 408 | - | 0.553922 |
| repA | ND008 | RepA | pND6-1 | CDS | 5212 | 867 | + | 0.534025 |
| tnpA | ND097 | transposase TnpA | pND6-1 | CDS | 93133 | 3030 | + | 0.607591 |
| tnpA | ND023 | tranposase TnpA | pND6-1 | CDS | 24546 | 1215 | + | 0.602469 |
| tnpA1 | ND064 | transposase | pND6-1 | CDS | 65398 | 330 | + | 0.584848 |
| tnpC | ND093 | putative TnpA repressor protein | pND6-1 | CDS | 91312 | 336 | - | 0.58631 |
| tnpR | ND063 | resolvase | pND6-1 | CDS | 64294 | 474 | - | 0.628692 |
| tnpR | ND096 | Tn5501 resolvase | pND6-1 | CDS | 92514 | 636 | + | 0.638365 |
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