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2024-04-25 04:26:35

Gene list

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Organism: Pseudomonas putida, NCIB 9816-4

Number of genes found: 92

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas putida, NCIB 9816-4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA putative regulatory proteinpDTG1 CDS59741 330 + 0.578788
NA putative LysR-type transcriptional regulatorpDTG1 CDS35054 915 - 0.590164
NA unknownpDTG1 CDS62179 1290 + 0.570543
NA unknownpDTG1 CDS70859 483 - 0.546584
NA unknownpDTG1 CDS6148 498 + 0.534137
NA unknownpDTG1 CDS34313 561 - 0.629234
NA unknownpDTG1 CDS32900 756 - 0.60582
NA putative ligase fragmentpDTG1 CDS13407 477 - 0.580713
NA putative F plasmid gene 32-like proteinpDTG1 CDS58413 828 + 0.586957
NA putative oxidoreductasepDTG1 CDS27386 1065 + 0.64507
NA unknownpDTG1 CDS56766 303 - 0.554455
NA unknownpDTG1 CDS37120 144 + 0.506944
NA unknownpDTG1 CDS54538 315 - 0.571429
NA putative zinc metalloproteasepDTG1 CDS61376 786 - 0.549618
NA unknownpDTG1 CDS31583 912 - 0.546053
NA putative oxidoreductasepDTG1 CDS28834 1032 + 0.578488
NA putative nucleasepDTG1 CDS71356 606 - 0.572607
NA unknownpDTG1 CDS62689 720 - 0.563889
NA unknownpDTG1 CDS71951 330 - 0.524242
NA unknownpDTG1 CDS69263 582 + 0.541237
NA pDTG1 misc_feature53562 1029 + 0.576288
NA unknownpDTG1 CDS7740 333 + 0.570571
NA unknownpDTG1 CDS56473 297 - 0.525253
NA unknownpDTG1 CDS82628 348 - 0.488506
NA unknownpDTG1 CDS26237 390 - 0.653846
NA unknownpDTG1 CDS6804 804 + 0.567164
NA putative oxidoreductasepDTG1 CDS36273 774 + 0.559432
NA unknownpDTG1 CDS60783 519 - 0.614644
NA unknownpDTG1 CDS12518 417 - 0.585132
NA putative nucleasepDTG1 CDS70173 639 - 0.539906
NA unknownpDTG1 CDS10754 408 + 0.546569
NA unknownpDTG1 CDS5243 762 + 0.511811
NA unknownpDTG1 CDS77859 405 - 0.548148
NA unknownpDTG1 CDS59295 423 + 0.579196
NA unknownpDTG1 CDS8116 396 + 0.537879
NA unknownpDTG1 CDS32541 360 - 0.6
NA putative regulatory proteinpDTG1 CDS57278 405 + 0.530864
NA unknownpDTG1 CDS78256 213 - 0.544601
NA pDTG1 misc_feature53008 438 + 0.504566
NA unknownpDTG1 CDS2563 306 + 0.460784
NA putative transposasepDTG1 CDS38412 393 - 0.590331
NA unknownpDTG1 CDS25553 408 - 0.568627
NA putative transposasepDTG1 CDS37747 708 - 0.611582
gst putative gluthione S-transferasepDTG1 CDS26757 618 + 0.613269
intA putative integrasepDTG1 CDS11158 1260 + 0.573016
mpfA putative mating pair formation proteinpDTG1 CDS82150 462 - 0.528139
mpfB putative mating pair formation proteinpDTG1 CDS81853 294 - 0.496599
mpfC putative mating pair formation proteinpDTG1 CDS79182 2685 - 0.52365
mpfD putative mating pair formation proteinpDTG1 CDS78496 690 - 0.547826
mpfE putative mating pair formation proteinpDTG1 CDS77008 864 - 0.489583
mpfF putative mating pair formation proteinpDTG1 CDS76339 666 - 0.509009
mpfG putative mating pair formation proteinpDTG1 CDS75523 792 - 0.520202
mpfH putative mating pair formation proteinpDTG1 CDS74237 1284 - 0.563084
mpfI putative mating pair formation proteinpDTG1 CDS73199 1029 - 0.552964
mpfJ putative mating pair formation proteinpDTG1 CDS72310 906 - 0.554084
nahAa naphthalene 1,2-dioxygenase reductase componentpDTG1 CDS14536 987 + 0.559271
nahAb naphthalene 1,2-dioxygenase ferredoxin componentpDTG1 CDS15666 315 + 0.507937
nahAc naphthalene 1,2-dioxygenase iron sulfur protein component large subunitpDTG1 CDS16051 1350 + 0.526667
nahAd naphthalene 1,2-dioxygenase iron sulfur protein component small subunitpDTG1 CDS17415 585 + 0.502564
nahB 1,2-dihydroxy-1,2-dihydronaphthalenedehydrogenas epDTG1 CDS18068 780 + 0.524359
nahC 1,2-dihydroxynaphthalene dioxygenasepDTG1 CDS20373 909 + 0.542354
nahD 2-hydroxychromene-2-carboxylate isomerasepDTG1 CDS23479 600 + 0.476667
nahE trans-o-hydroxybenzylidenepyruvatehydratase-aldolasepDTG1 CDS22221 1005 + 0.546269
nahF salicyladehyde dehydrogenasepDTG1 CDS18894 1452 + 0.570248
nahG salicylate hydroxylasepDTG1 CDS50648 1317 - 0.637054
nahH catechol 2,3-dioxygenasepDTG1 CDS47691 924 - 0.546537
nahI 2-hydroxymuconic semialdehyde dehydrogenasepDTG1 CDS46196 1461 - 0.661191
nahJ 4-oxalocrotonate tautomerasepDTG1 CDS41478 192 - 0.604167
nahK 4-oxalocrotonate decarboxylasepDTG1 CDS41724 795 - 0.645283
nahL 2-oxypent-4-pentenoate hydratasepDTG1 CDS44510 786 - 0.642494
nahM 4-hydroxy-2-oxovalerate aldolasepDTG1 CDS42515 1041 - 0.654179
nahN 2-hydroxymuconic semialdehyde hydrolasepDTG1 CDS45307 882 - 0.684807
nahO acetaldehyde dehydrogenasepDTG1 CDS43567 924 - 0.656926
nahQ unknownpDTG1 CDS21537 636 + 0.501572
nahR NahRpDTG1 CDS52104 903 + 0.609081
nahT ferredoxinpDTG1 CDS48635 318 - 0.562893
nahY methyl-accepting chemotaxis proteinpDTG1 CDS39625 1617 - 0.519481
parA ParApDTG1 CDS513 768 + 0.536458
parB ParBpDTG1 CDS1294 927 + 0.538296
parR ParRpDTG1 CDS2217 342 + 0.546784
rep putative replication proteinpDTG1 CDS4634 570 + 0.540351
res1 putative resolvasepDTG1 CDS3557 630 + 0.547619
res2 putative resolvasepDTG1 CDS24488 474 - 0.628692
ruvA putative ultraviolet light resistance protein ApDTG1 CDS55492 396 - 0.560606
ruvB1 putative ultraviolet light resistance protein BpDTG1 CDS8508 1365 - 0.561905
ruvB2 putative ultraviolet light resistance protein BpDTG1 CDS54934 540 - 0.553704
ssb putative truncated single strand binding proteinpDTG1 CDS57733 486 + 0.565844
tnpA transposasepDTG1 CDS49434 981 + 0.589195
traA putative TraA proteinpDTG1 CDS64289 393 + 0.536896
traB putative TraB proteinpDTG1 CDS64674 1557 + 0.554913
traC putative TraC proteinpDTG1 CDS66241 2946 + 0.555329
traD putative TraD proteinpDTG1 CDS63405 456 - 0.524123