Gene list
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Organism: Ruegeria sp. PR1b, PR1b
Number of genes found: 188
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Ruegeria sp. PR1b, PR1b | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | RC227 | pSD25 | CDS | 142055 | 1629 | - | 0.598527 | |
NA | RB135 | pSD20 | CDS | 49853 | 2889 | - | 0.593631 | |
NA | RC218 | pSD25 | CDS | 132612 | 579 | - | 0.547496 | |
NA | RC123 | pSD25 | CDS | 26039 | 825 | + | 0.631515 | |
NA | RC214 | pSD25 | CDS | 128250 | 1095 | + | 0.623744 | |
NA | RC128 | pSD25 | CDS | 31551 | 348 | - | 0.517241 | |
NA | RC155 | pSD25 | CDS | 59086 | 522 | - | 0.559387 | |
NA | RB139 | pSD20 | CDS | 56686 | 1932 | + | 0.610766 | |
NA | RC150 | pSD25 | CDS | 54650 | 603 | - | 0.640133 | |
NA | RB119 | pSD20 | CDS | 29689 | 1902 | + | 0.671924 | |
NA | RC141 | pSD25 | CDS | 43080 | 906 | - | 0.5883 | |
NA | RB104 | pSD20 | CDS | 5532 | 2283 | + | 0.602716 | |
NA | RC185 | pSD25 | CDS | 99675 | 519 | - | 0.599229 | |
NA | RB134 | pSD20 | CDS | 47242 | 2478 | + | 0.676755 | |
NA | RB116 | pSD20 | CDS | 26874 | 561 | + | 0.604278 | |
NA | RB127 | pSD20 | CDS | 38929 | 1053 | - | 0.611586 | |
NA | RC190 | pSD25 | CDS | 104809 | 1023 | - | 0.631476 | |
NA | RC173 | pSD25 | CDS | 84517 | 2334 | - | 0.648243 | |
NA | RB102 | pSD20 | CDS | 3022 | 1170 | + | 0.661538 | |
NA | RC168 | pSD25 | CDS | 76429 | 1077 | + | 0.610956 | |
NA | RC156 | pSD25 | CDS | 59701 | 2499 | - | 0.601441 | |
NA | RC138 | pSD25 | CDS | 40587 | 432 | - | 0.571759 | |
NA | RC118 | pSD25 | CDS | 19097 | 459 | - | 0.59695 | |
NA | RC108 | pSD25 | CDS | 9165 | 492 | + | 0.623984 | |
NA | RB112 | pSD20 | CDS | 20834 | 882 | + | 0.579365 | |
NA | RC101 | pSD25 | CDS | 1502 | 1017 | - | 0.551622 | |
NA | RC195 | pSD25 | CDS | 111792 | 909 | - | 0.632563 | |
NA | pSD20 | repeat_unit | 1201 | 15 | + | 0.733333 | ||
NA | RC183 | pSD25 | CDS | 96214 | 672 | - | 0.622024 | |
NA | RC149 | pSD25 | CDS | 52910 | 1218 | - | 0.587028 | |
NA | RB148 | pSD20 | CDS | 69672 | 1359 | - | 0.623252 | |
NA | RB123 | pSD20 | CDS | 34837 | 816 | - | 0.609069 | |
NA | RC199 | pSD25 | CDS | 115092 | 1032 | - | 0.601744 | |
NA | RC105 | pSD25 | CDS | 6354 | 693 | - | 0.643579 | |
NA | RB100 | pSD20 | CDS | 75 | 1005 | - | 0.652736 | |
NA | RC186 | pSD25 | CDS | 100190 | 327 | - | 0.599388 | |
NA | RC127 | pSD25 | CDS | 30465 | 933 | + | 0.649518 | |
NA | RC212 | pSD25 | CDS | 125595 | 1470 | + | 0.636054 | |
NA | pSD20 | repeat_unit | 1179 | 15 | + | 0.666667 | ||
NA | RC157 | pSD25 | CDS | 62711 | 906 | + | 0.589404 | |
NA | RB136 | pSD20 | CDS | 52824 | 618 | + | 0.571197 | |
NA | RB144 | pSD20 | CDS | 66024 | 609 | - | 0.604269 | |
NA | RB142 | pSD20 | CDS | 61495 | 2238 | - | 0.647453 | |
NA | RC179 | pSD25 | CDS | 92487 | 1320 | + | 0.685606 | |
NA | RC163 | pSD25 | CDS | 71271 | 810 | + | 0.612346 | |
NA | RC145 | pSD25 | CDS | 47895 | 2127 | - | 0.622943 | |
NA | RC109 | pSD25 | CDS | 10686 | 777 | + | 0.521236 | |
NA | RC187 | pSD25 | CDS | 100640 | 654 | - | 0.62844 | |
NA | RC136 | pSD25 | CDS | 38844 | 1002 | + | 0.538922 | |
NA | RB122 | pSD20 | CDS | 33874 | 960 | - | 0.615625 | |
NA | RC175 | pSD25 | CDS | 88736 | 981 | - | 0.648318 | |
NA | RC231 | pSD25 | CDS | 146482 | 885 | - | 0.674576 | |
NA | RC196 | pSD25 | CDS | 112863 | 759 | - | 0.623188 | |
NA | RC148 | pSD25 | CDS | 52100 | 930 | + | 0.565591 | |
NA | RB107 | pSD20 | CDS | 11451 | 1116 | - | 0.604839 | |
NA | RB149 | pSD20 | CDS | 71084 | 1743 | - | 0.549053 | |
NA | RC143 | pSD25 | CDS | 45587 | 1596 | - | 0.618421 | |
NA | RC130 | pSD25 | CDS | 32892 | 972 | + | 0.556584 | |
NA | RC182 | pSD25 | CDS | 95522 | 537 | - | 0.588454 | |
NA | RB132 | pSD20 | CDS | 44956 | 807 | + | 0.645601 | |
NA | RC198 | pSD25 | CDS | 114232 | 864 | - | 0.541667 | |
NA | RC223 | pSD25 | CDS | 138182 | 984 | + | 0.610772 | |
NA | RC135 | pSD25 | CDS | 38048 | 915 | + | 0.521311 | |
NA | RC100 | pSD25 | CDS | 1 | 1281 | - | 0.615144 | |
NA | RB150 | pSD20 | CDS | 73384 | 618 | - | 0.642395 | |
NA | RB133 | pSD20 | CDS | 45768 | 1401 | - | 0.680228 | |
NA | RB101 | pSD20 | CDS | 1546 | 1410 | + | 0.653901 | |
NA | pSD20 | repeat_unit | 1223 | 15 | + | 0.6 | ||
NA | RC197 | pSD25 | CDS | 113780 | 321 | - | 0.582555 | |
NA | RC129 | pSD25 | CDS | 32014 | 660 | - | 0.506061 | |
NA | RC205 | pSD25 | CDS | 120416 | 1068 | + | 0.63015 | |
NA | RB151 | pSD20 | CDS | 74066 | 2004 | - | 0.648703 | |
NA | RC122 | pSD25 | CDS | 23997 | 1653 | - | 0.5366 | |
NA | RC222 | pSD25 | CDS | 137040 | 1179 | + | 0.606446 | |
NA | RB131 | pSD20 | CDS | 43960 | 972 | + | 0.661523 | |
NA | RB140 | pSD20 | CDS | 58737 | 1530 | + | 0.608497 | |
NA | RC217 | pSD25 | CDS | 131056 | 1500 | + | 0.592 | |
NA | RC151 | pSD25 | CDS | 55263 | 945 | - | 0.604233 | |
NA | RB129 | pSD20 | CDS | 40606 | 1311 | - | 0.630053 | |
NA | RC193 | pSD25 | CDS | 109283 | 984 | - | 0.563008 | |
NA | RC194 | pSD25 | CDS | 110251 | 1200 | - | 0.541667 | |
NA | RC161 | pSD25 | CDS | 67573 | 2391 | + | 0.627771 | |
NA | RC164 | pSD25 | CDS | 72097 | 654 | + | 0.62844 | |
NA | RC184 | pSD25 | CDS | 96863 | 2460 | - | 0.656098 | |
NA | RB138 | pSD20 | CDS | 54880 | 1467 | - | 0.646898 | |
NA | RC133 | pSD25 | CDS | 35625 | 372 | + | 0.629032 | |
NA | RB128 | pSD20 | CDS | 39987 | 555 | - | 0.625225 | |
NA | RC131 | pSD25 | CDS | 33867 | 345 | - | 0.547826 | |
NA | RB146 | pSD20 | CDS | 67662 | 1122 | + | 0.637255 | |
NA | RC160 | pSD25 | CDS | 66030 | 1008 | + | 0.614087 | |
NA | RC209 | pSD25 | CDS | 122679 | 276 | + | 0.65942 | |
NA | RC159 | pSD25 | CDS | 65115 | 912 | - | 0.550439 | |
NA | RC116 | pSD25 | CDS | 18416 | 669 | - | 0.617339 | |
NA | RB115 | pSD20 | CDS | 23921 | 2892 | + | 0.673236 | |
NA | RC126 | pSD25 | CDS | 29406 | 942 | + | 0.55414 | |
NA | RB124 | pSD20 | CDS | 35719 | 1038 | - | 0.557803 | |
NA | RC224 | pSD25 | CDS | 139162 | 804 | + | 0.616915 | |
NA | RC166 | pSD25 | CDS | 73379 | 1446 | + | 0.634163 | |
NA | RC162 | pSD25 | CDS | 70099 | 1173 | + | 0.632566 | |
NA | RC181 | pSD25 | CDS | 94792 | 654 | - | 0.636086 | |
NA | RC115 | pSD25 | CDS | 17399 | 594 | + | 0.651515 | |
NA | RC204 | pSD25 | CDS | 120166 | 252 | - | 0.646825 | |
NA | RC216 | pSD25 | CDS | 130214 | 804 | + | 0.624378 | |
NA | RC119 | pSD25 | CDS | 20617 | 1026 | - | 0.564327 | |
NA | RC134 | pSD25 | CDS | 36035 | 1503 | + | 0.600798 | |
NA | RC206 | pSD25 | CDS | 120447 | 321 | - | 0.666667 | |
NA | RC142 | pSD25 | CDS | 44594 | 963 | - | 0.602285 | |
NA | RB141 | pSD20 | CDS | 60788 | 711 | - | 0.668073 | |
NA | RB145 | pSD20 | CDS | 66629 | 885 | - | 0.723164 | |
NA | RC207 | pSD25 | CDS | 121480 | 759 | + | 0.661397 | |
NA | RB105 | pSD20 | CDS | 7827 | 660 | + | 0.580303 | |
NA | RC176 | pSD25 | CDS | 89749 | 567 | - | 0.645503 | |
NA | RC139 | pSD25 | CDS | 41021 | 1137 | - | 0.598945 | |
NA | RC200 | pSD25 | CDS | 116120 | 1068 | - | 0.617041 | |
NA | RC180 | pSD25 | CDS | 93821 | 510 | - | 0.65098 | |
NA | RC153 | pSD25 | CDS | 57295 | 1194 | - | 0.605528 | |
NA | RC211 | pSD25 | CDS | 124222 | 465 | - | 0.574194 | |
NA | RC232 | pSD25 | CDS | 147523 | 1116 | + | 0.649642 | |
NA | RC210 | pSD25 | CDS | 122951 | 1002 | + | 0.608782 | |
NA | RB147 | pSD20 | CDS | 68786 | 717 | - | 0.595537 | |
NA | RC178 | pSD25 | CDS | 90990 | 858 | - | 0.614219 | |
NA | RC170 | pSD25 | CDS | 78933 | 1719 | + | 0.548575 | |
NA | RC158 | pSD25 | CDS | 63854 | 792 | + | 0.59596 | |
NA | RB109 | pSD20 | CDS | 14006 | 1512 | + | 0.636905 | |
NA | RC113 | pSD25 | CDS | 16032 | 579 | - | 0.62867 | |
NA | RC177 | pSD25 | CDS | 90334 | 1059 | - | 0.634561 | |
NA | RC171 | pSD25 | CDS | 81395 | 978 | + | 0.534765 | |
NA | RC226 | pSD25 | CDS | 141466 | 687 | - | 0.586608 | |
NA | RC221 | pSD25 | CDS | 135723 | 1287 | + | 0.585082 | |
NA | RB126 | pSD20 | CDS | 38017 | 849 | - | 0.6596 | |
NA | RC229 | pSD25 | CDS | 144643 | 1107 | - | 0.606143 | |
NA | RC110 | pSD25 | CDS | 11548 | 627 | - | 0.555024 | |
NA | RC102 | pSD25 | CDS | 2515 | 1359 | - | 0.543046 | |
NA | RB103 | pSD20 | CDS | 4513 | 975 | + | 0.646154 | |
NA | RB110 | pSD20 | CDS | 15514 | 4098 | + | 0.648121 | |
NA | RC202 | pSD25 | CDS | 118436 | 966 | - | 0.575569 | |
NA | RC219 | pSD25 | CDS | 133617 | 696 | - | 0.587644 | |
NA | RC146 | pSD25 | CDS | 49918 | 690 | - | 0.555072 | |
NA | RC121 | pSD25 | CDS | 22223 | 1788 | + | 0.532998 | |
NA | RC120 | pSD25 | CDS | 21639 | 597 | - | 0.609715 | |
NA | RC112 | pSD25 | CDS | 14337 | 603 | - | 0.603648 | |
NA | RB113 | pSD20 | CDS | 21757 | 1032 | - | 0.596899 | |
NA | RB143 | pSD20 | CDS | 63974 | 1797 | + | 0.640512 | |
NA | RC189 | pSD25 | CDS | 101961 | 2022 | - | 0.63996 | |
NA | RC132 | pSD25 | CDS | 34499 | 720 | + | 0.570833 | |
NA | RC107 | pSD25 | CDS | 8542 | 780 | + | 0.587179 | |
NA | RC213 | pSD25 | CDS | 127083 | 1056 | + | 0.601326 | |
NA | RB137 | pSD20 | CDS | 53710 | 1167 | - | 0.598972 | |
NA | RC188 | pSD25 | CDS | 101293 | 594 | - | 0.636364 | |
NA | RB114 | pSD20 | CDS | 22760 | 1149 | + | 0.631854 | |
NA | RB118 | pSD20 | CDS | 28399 | 1197 | + | 0.654971 | |
NA | RC152 | pSD25 | CDS | 56313 | 921 | + | 0.590662 | |
NA | RB120 | pSD20 | CDS | 31293 | 1608 | + | 0.649254 | |
NA | RC165 | pSD25 | CDS | 72909 | 540 | + | 0.611111 | |
NA | RC174 | pSD25 | CDS | 87840 | 1131 | - | 0.657825 | |
NA | RC125 | pSD25 | CDS | 27475 | 1695 | - | 0.532743 | |
NA | RB108 | pSD20 | CDS | 12776 | 1206 | + | 0.585406 | |
NA | RC230 | pSD25 | CDS | 145883 | 603 | - | 0.6534 | |
NA | RC124 | pSD25 | CDS | 26936 | 453 | + | 0.644592 | |
NA | RC225 | pSD25 | CDS | 140044 | 1227 | - | 0.601467 | |
NA | RC154 | pSD25 | CDS | 58634 | 456 | - | 0.563596 | |
NA | RB125 | pSD20 | CDS | 37130 | 891 | - | 0.634119 | |
NA | RC117 | pSD25 | CDS | 18458 | 450 | + | 0.615556 | |
NA | RB130 | pSD20 | CDS | 41913 | 1734 | - | 0.640715 | |
NA | RC106 | pSD25 | CDS | 6706 | 1524 | - | 0.639764 | |
NA | RC220 | pSD25 | CDS | 134437 | 1323 | + | 0.613757 | |
NA | RC191 | pSD25 | CDS | 106505 | 1248 | + | 0.584135 | |
NA | RC172 | pSD25 | CDS | 82508 | 2001 | - | 0.614693 | |
NA | branched-chain amino acid ABC transporter | pSD25 | CDS | 122235 | 405 | + | 0.644444 | |
NA | RC167 | pSD25 | CDS | 74766 | 1050 | + | 0.611429 | |
NA | RC228 | pSD25 | CDS | 143818 | 333 | - | 0.624625 | |
NA | RC201 | pSD25 | CDS | 117114 | 1326 | - | 0.581448 | |
NA | RB121 | pSD20 | CDS | 32928 | 792 | - | 0.676768 | |
NA | RC169 | pSD25 | CDS | 77677 | 1257 | + | 0.536197 | |
NA | RB106 | pSD20 | CDS | 8493 | 1791 | - | 0.615299 | |
NA | RC104 | pSD25 | CDS | 5482 | 1122 | - | 0.622995 | |
NA | RC215 | pSD25 | CDS | 129341 | 870 | + | 0.597701 | |
NA | RC203 | pSD25 | CDS | 119864 | 306 | + | 0.571895 | |
NA | RB111 | pSD20 | CDS | 19608 | 1131 | + | 0.588859 | |
NA | RC147 | pSD25 | CDS | 50639 | 1074 | - | 0.608007 | |
NA | RC114 | pSD25 | CDS | 16780 | 915 | + | 0.662295 | |
NA | RC144 | pSD25 | CDS | 47468 | 564 | - | 0.602837 | |
NA | RB117 | pSD20 | CDS | 27431 | 972 | + | 0.619342 | |
NA | RC103 | pSD25 | CDS | 4085 | 375 | - | 0.626667 | |
NA | RC192 | pSD25 | CDS | 107989 | 1143 | - | 0.505687 | |
NA | RC137 | pSD25 | CDS | 39909 | 399 | + | 0.496241 | |
NA | RC111 | pSD25 | CDS | 13066 | 1179 | - | 0.631891 | |
NA | RC140 | pSD25 | CDS | 42240 | 618 | + | 0.567961 |