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2024-04-25 22:16:03

Gene list

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Organism: Cupriavidus necator, JMP134

Number of genes found: 101

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Cupriavidus necator, JMP134
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA putative mercuric resistance protein MerEpJP4 CDS52097 237 - 0.64557
NA putative ABC transporter ATP-binding proteinpJP4 CDS47768 735 + 0.692517
NA putative Tn5504 resolvasepJP4 CDS10464 1692 - 0.6513
NA putative transcription regulatorpJP4 CDS42902 837 + 0.669056
NA pJP4 repeat_region10376 59 + 0.525424
NA putative oxidoreductasepJP4 CDS43716 774 + 0.741602
NA pJP4 repeat_region16672 59 + 0.508475
NA Upf31.0pJP4 CDS71769 675 + 0.660741
NA pJP4 misc_feature9574 292 - 0.674658
NA hypothetical proteinpJP4 CDS8665 282 + 0.684397
NA putative ABC transporter permease proteinpJP4 CDS46809 963 + 0.681205
NA putative thiolasepJP4 CDS39368 1167 + 0.685518
NA Upf30.5pJP4 CDS71183 432 + 0.659722
NA pJP4 repeat_region55610 38 + 0.473684
NA putative long-chain-fatty-acid-CoA ligasepJP4 CDS37821 1542 + 0.666667
NA putative ABC transporter permease proteinpJP4 CDS45914 879 + 0.691695
NA pJP4 misc_feature85790 92 + 0.48913
NA putative vanillate O-demethylase oxygenase chain ApJP4 CDS40968 1077 - 0.640669
NA pJP4 repeat_region10376 6355 + 0.600629
NA pJP4 stem_loop32523 54187 + 0.657538
NA putative transcription regulation proteinpJP4 CDS34798 840 - 0.678571
NA putative ABC transporter substrate-binding proteinpJP4 CDS44556 1344 + 0.654762
NA pJP4 misc_feature55727 40640 + 0.660335
NA putative transcription regulatorpJP4 CDS42110 780 + 0.634615
IS1071 pJP4 repeat_region48472 110 + 0.518182
IS1071 pJP4 repeat_region51566 110 + 0.472727
IS1071 pJP4 repeat_region9866 110 + 0.472727
ISJP4 pJP4 repeat_region24371 19 + 0.368421
ISJP4 pJP4 repeat_region36878 19 + 0.315789
ISJP4 pJP4 repeat_region25269 21 + 0.285714
din DNA-damage-inducible proteinpJP4 CDS8415 264 + 0.647727
incC1 inclusion membrane proteinpJP4 CDS3621 1083 - 0.647276
incC2 inclusion membrane proteinpJP4 CDS3621 765 - 0.652288
kfrA transcriptional regulatorpJP4 CDS1365 1032 - 0.747093
klcA stable inheritance proteinpJP4 CDS7814 429 - 0.675991
klcB stable inheritance proteinpJP4 CDS6331 1209 - 0.695616
kleA stable inheritance proteinpJP4 CDS5663 237 - 0.670886
kleE stable inheritance proteinpJP4 CDS5128 384 - 0.625
kleF stable inheritance proteinpJP4 CDS4797 330 - 0.633333
korA transcriptional repressorpJP4 CDS4382 309 - 0.634304
korB transcriptional repressorpJP4 CDS2575 1050 - 0.673333
korC transcriptional repressorpJP4 CDS6057 258 - 0.682171
merA mercury reductasepJP4 CDS52713 1686 - 0.656584
merD mercury coregulator proteinpJP4 CDS52330 366 - 0.696721
merP periplasmic mercury ion binding proteinpJP4 CDS54470 276 - 0.615942
merR mercury regulatory proteinpJP4 CDS55180 435 + 0.609195
merT mercury ion transport proteinpJP4 CDS54758 351 - 0.615385
parA resolvasepJP4 CDS72445 660 - 0.687879
ssb single-strand DNA binding proteinpJP4 CDS56994 342 - 0.596491
tfdA 2,4-D / a-ketoglutarate dioxygenasepJP4 CDS36915 864 + 0.634259
tfdBI 2,4-dichlorophenol hydroxylasepJP4 CDS17688 1797 - 0.631052
tfdBII 2,4-dichlorophenol hydroxylasepJP4 CDS26765 1761 - 0.668938
tfdCI chlorocatechol-1,2-dioxygenasepJP4 CDS22778 768 - 0.565104
tfdCII chlorocatechol-1,2-dioxygenasepJP4 CDS30403 762 - 0.644357
tfdDI chloromuconate cycloisomerasepJP4 CDS21669 1113 - 0.577718
tfdDII chloromuconate cycloisomerasepJP4 CDS31209 1119 - 0.666667
tfdEI dienelactone hydrolasepJP4 CDS20890 705 - 0.547518
tfdEII dienelactone hydrolasepJP4 CDS29674 708 - 0.652542
tfdFI maleylacetate reductasepJP4 CDS19829 1065 - 0.565258
tfdFII maleylacetate reductasepJP4 CDS28593 1080 - 0.698148
tfdK 2,4-D transport proteinpJP4 CDS25286 1383 - 0.654375
tfdR LysR-type transcriptional regulatorpJP4 CDS32523 888 + 0.666667
tfdR putative enoyl-CoA hydratasepJP4 CDS33424 1347 + 0.687454
tfdS LysR-type transcriptional regulatorpJP4 CDS35822 888 - 0.667793
tfdT transcriptional regulatory proteinpJP4 CDS23741 687 + 0.57933
tnpA IS1071 transposasepJP4 CDS48617 2916 + 0.596708
tnpA putative Tn5504 transposasepJP4 CDS12299 3027 + 0.58672
tnpA ISJP4 transposasepJP4 CDS24489 789 + 0.618504
traC2 DNA replication primasepJP4 CDS73785 4347 - 0.68622
traC3 DNA replication primasepJP4 CDS73785 3693 - 0.686163
traC4 DNA replication primasepJP4 CDS73785 2244 - 0.701426
traD TraDpJP4 CDS78135 390 - 0.725641
traE DNA topoisomerasepJP4 CDS78546 2064 - 0.671027
traF maturation peptidasepJP4 CDS80621 537 - 0.662942
traG DNA transport proteinpJP4 CDS81154 1914 - 0.66092
traH DNA relaxasepJP4 CDS83366 393 - 0.676845
traI relaxosome stabilization proteinpJP4 CDS83064 2241 - 0.668898
traJ oriT binding proteinpJP4 CDS85339 318 - 0.663522
traK oriT binding proteinpJP4 CDS86087 399 + 0.631579
traL transfer origin proteinpJP4 CDS86485 726 + 0.628099
traM essential transfer proteinpJP4 CDS87210 441 + 0.675737
traN TraNpJP4 CDS165 654 - 0.692661
traO TraOpJP4 CDS847 348 - 0.583333
trbA regulatory protein for mating pair formationpJP4 CDS57571 363 + 0.586777
trbB ATPase autophosphorylasepJP4 CDS58243 963 + 0.619938
trbC mating pair formationpJP4 CDS59222 465 + 0.668817
trbD mating pair formationpJP4 CDS59690 312 + 0.634615
trbE mating pair formationpJP4 CDS59998 2559 + 0.63814
trbF mating pair formationpJP4 CDS62553 783 + 0.65645
trbG mating pair formationpJP4 CDS63332 921 + 0.639522
trbH mating pair formationpJP4 CDS64255 489 + 0.705521
trbI mating pair formationpJP4 CDS64748 1422 + 0.673699
trbJ mating pair formationpJP4 CDS66190 765 + 0.60915
trbK plasmid entry / exclusionpJP4 CDS66964 228 + 0.622807
trbL DNA topoisomerasepJP4 CDS67202 1719 + 0.681792
trbM mating pair formationpJP4 CDS68938 588 + 0.67517
trbN mating pair formationpJP4 CDS69539 636 + 0.691824
trbO TrbOpJP4 CDS70203 267 + 0.636704
trbP TrbppJP4 CDS70469 699 + 0.682403
trfA1 transreplication factorpJP4 CDS55727 1221 - 0.657658
trfA2 transreplication factorpJP4 CDS55727 855 - 0.636257