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2024-04-26 01:55:50

Gene list

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Organism: Agrobacterium rhizogenes, MAFF03-01724

Number of genes found: 183

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Agrobacterium rhizogenes, MAFF03-01724
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA pRi1724 misc_signal11328 25 + 0.4
NA pRi1724 promoter202496 12 + 0.416667
NA pRi1724 promoter205589 13 + 0.230769
NA pRi1724 promoter205613 12 + 0.333333
NA pRi1724 promoter189463 12 + 0.333333
NA pRi1724 promoter192752 12 + 0.25
NA pRi1724 misc_signal26426 96 + 0.645833
NA pRi1724 rep_origin162351 154 + 0.480519
NA pRi1724 rep_origin26401 25 + 0.28
NA pRi1724 oriT140057 32 + 0.59375
orf91 hypothetical proteinpRi1724 CDS110371 606 + 0.635314
orf92 hypothetical proteinpRi1724 CDS110989 402 + 0.609453
riorf1 pRi1724 CDS869 672 - 0.613095
riorf10 pRi1724 CDS11652 405 - 0.530864
riorf100 pRi1724 CDS123450 930 + 0.608602
riorf101 pRi1724 CDS124751 528 + 0.55303
riorf102 pRi1724 CDS125650 315 + 0.64127
riorf103 pRi1724 CDS126095 267 + 0.561798
riorf104 pRi1724 CDS127998 315 + 0.644444
riorf105 pRi1724 CDS129353 549 - 0.581056
riorf106 pRi1724 CDS130501 951 + 0.57939
riorf107 pRi1724 CDS132039 1857 + 0.624663
riorf108 pRi1724 CDS134087 1494 - 0.565596
riorf109 pRi1724 CDS137408 2004 - 0.608283
riorf11 pRi1724 CDS12446 825 - 0.532121
riorf110 pRi1724 CDS139398 216 - 0.625
riorf111 pRi1724 CDS139618 294 - 0.632653
riorf112 pRi1724 CDS140166 3327 + 0.614367
riorf113 pRi1724 CDS143489 567 + 0.638448
riorf114 pRi1724 CDS144045 1164 + 0.634021
riorf115 hypothetical proteinpRi1724 CDS145220 612 + 0.617647
riorf116 hypothetical proteinpRi1724 CDS146035 1566 + 0.60281
riorf117 hypothetical proteinpRi1724 CDS147691 189 - 0.592593
riorf118 pRi1724 CDS148115 324 + 0.57716
riorf119 pRi1724 CDS148442 675 - 0.573333
riorf12 pRi1724 CDS13414 1479 + 0.515213
riorf120 pRi1724 CDS149495 1299 - 0.588145
riorf121 pRi1724 CDS150805 441 - 0.641723
riorf122 pRi1724 CDS151249 813 - 0.606396
riorf123 pRi1724 CDS152078 663 - 0.597285
riorf124 pRi1724 CDS152761 1182 - 0.615059
riorf125 pRi1724 CDS154020 117 - 0.615385
riorf126 pRi1724 CDS154133 798 - 0.587719
riorf127 pRi1724 CDS154908 2451 - 0.600163
riorf128 pRi1724 CDS157369 300 - 0.613333
riorf129 pRi1724 CDS157661 384 - 0.643229
riorf13 pRi1724 CDS15253 2286 + 0.508311
riorf130 pRi1724 CDS158034 978 - 0.619632
riorf131 pRi1724 CDS159021 624 - 0.600962
riorf132 pRi1724 CDS159961 1275 + 0.548235
riorf133 pRi1724 CDS161329 1008 + 0.536706
riorf134 pRi1724 CDS162503 1212 + 0.558581
riorf135 pRi1724 CDS165119 591 + 0.571912
riorf136 pRi1724 CDS168649 1152 - 0.682292
riorf137 pRi1724 CDS169926 954 + 0.641509
riorf138 pRi1724 CDS170876 702 + 0.595442
riorf139 pRi1724 CDS171578 351 + 0.547009
riorf14 pRi1724 CDS18339 282 + 0.535461
riorf140 pRi1724 CDS172520 1125 + 0.573333
riorf141 hypothetical proteinpRi1724 CDS173646 2259 + 0.574591
riorf142 pRi1724 CDS177722 471 + 0.530786
riorf143 pRi1724 CDS178351 390 + 0.561538
riorf144 hypothetical proteinpRi1724 CDS179300 1269 + 0.570528
riorf145 pRi1724 CDS181447 303 + 0.528053
riorf146 pRi1724 CDS181541 849 + 0.528857
riorf147 pRi1724 CDS182597 810 - 0.550617
riorf148 pRi1724 CDS184499 1062 - 0.594162
riorf149 pRi1724 CDS186866 1080 + 0.609259
riorf15 pRi1724 CDS19068 840 - 0.5
riorf150 pRi1724 CDS187650 417 + 0.630695
riorf151 pRi1724 CDS187996 1353 + 0.524021
riorf152 pRi1724 CDS189552 2556 + 0.515258
riorf153 pRi1724 CDS192879 723 + 0.567082
riorf154 pRi1724 CDS193601 366 + 0.606557
riorf155 pRi1724 CDS193963 327 + 0.565749
riorf156 pRi1724 CDS194289 2370 + 0.556962
riorf157 pRi1724 CDS196675 669 + 0.550075
riorf158 pRi1724 CDS197410 888 + 0.523649
riorf159 pRi1724 CDS198325 168 + 0.517857
riorf16 pRi1724 CDS21016 543 + 0.54512
riorf160 pRi1724 CDS198479 714 + 0.536415
riorf161 pRi1724 CDS199189 879 + 0.552901
riorf162 pRi1724 CDS200067 1131 + 0.558798
riorf163 pRi1724 CDS201231 1035 + 0.552657
riorf164 pRi1724 CDS202537 690 + 0.527536
riorf165 pRi1724 CDS204195 606 - 0.534653
riorf166 pRi1724 CDS204803 696 - 0.520115
riorf167 pRi1724 CDS205753 447 + 0.534676
riorf168 pRi1724 CDS206225 1347 + 0.571641
riorf169 pRi1724 CDS207827 2601 + 0.562476
riorf17 pRi1724 CDS22254 597 + 0.484087
riorf170 pRi1724 CDS210487 1983 + 0.532022
riorf171 pRi1724 CDS212761 2325 + 0.564301
riorf172 pRi1724 CDS215338 930 + 0.550538
riorf173 pRi1724 CDS216371 1356 + 0.519174
riorf18 pRi1724 CDS23316 273 - 0.549451
riorf19 pRi1724 CDS24197 567 + 0.495591
riorf2 pRi1724 CDS1627 519 - 0.603083
riorf20 pRi1724 CDS25138 987 - 0.508612
riorf21 pRi1724 CDS26719 177 - 0.564972
riorf22 hypothetical proteinpRi1724 CDS27055 420 + 0.578571
riorf23 pRi1724 CDS27477 546 + 0.556777
riorf24 pRi1724 CDS28128 783 + 0.61175
riorf25 pRi1724 CDS28850 537 - 0.562384
riorf26 pRi1724 CDS29424 663 - 0.546003
riorf27 pRi1724 CDS30096 696 - 0.566092
riorf28 pRi1724 CDS30971 840 - 0.575
riorf29 pRi1724 CDS31837 759 - 0.559947
riorf3 pRi1724 CDS2323 882 - 0.590703
riorf30 pRi1724 CDS33117 1644 - 0.579075
riorf31 pRi1724 CDS34760 2127 - 0.584861
riorf32 pRi1724 CDS36963 654 + 0.559633
riorf33 pRi1724 CDS37951 756 + 0.56746
riorf34 pRi1724 CDS38766 801 - 0.550562
riorf35 pRi1724 CDS39582 852 - 0.57277
riorf36 pRi1724 CDS40430 1059 - 0.565628
riorf37 pRi1724 CDS41550 795 - 0.576101
riorf38 pRi1724 CDS42736 1353 - 0.579453
riorf39 pRi1724 CDS44421 978 + 0.599182
riorf4 pRi1724 CDS4906 603 - 0.6534
riorf40 pRi1724 CDS45395 1536 + 0.599609
riorf41 pRi1724 CDS46934 801 + 0.581773
riorf42 pRi1724 CDS47751 1686 + 0.623962
riorf43 pRi1724 CDS49497 597 + 0.530988
riorf44 pRi1724 CDS50237 204 + 0.5
riorf45 hypothetical proteinpRi1724 CDS50576 1113 + 0.539982
riorf46 pRi1724 CDS51900 1428 + 0.594538
riorf47 pRi1724 CDS53334 768 - 0.570312
riorf48 pRi1724 CDS54386 1002 + 0.57984
riorf49 pRi1724 CDS55509 1380 + 0.560145
riorf5 pRi1724 CDS5604 888 + 0.611486
riorf50 pRi1724 CDS57966 1011 + 0.563798
riorf51 pRi1724 CDS59198 621 - 0.518519
riorf52 pRi1724 CDS60031 510 - 0.541176
riorf53 pRi1724 CDS60716 630 - 0.54127
riorf54 pRi1724 CDS61384 780 - 0.564103
riorf55 hypothetical proteinpRi1724 CDS63178 5289 - 0.550009
riorf56 pRi1724 CDS69337 375 + 0.64
riorf57 pRi1724 CDS69656 747 - 0.626506
riorf58 pRi1724 CDS70399 1392 - 0.60273
riorf59 pRi1724 CDS72064 789 - 0.570342
riorf6 pRi1724 CDS6660 633 - 0.617694
riorf60 pRi1724 CDS73429 1254 + 0.603668
riorf61 pRi1724 CDS74655 1566 + 0.587484
riorf62 pRi1724 CDS76304 960 + 0.6
riorf63 pRi1724 CDS77265 918 + 0.594771
riorf64 pRi1724 CDS78183 1812 + 0.603753
riorf65 pRi1724 CDS79984 759 + 0.592885
riorf66 pRi1724 CDS80735 1266 + 0.629542
riorf67 pRi1724 CDS81990 930 + 0.632258
riorf68 pRi1724 CDS82850 1020 + 0.593137
riorf69 pRi1724 CDS83873 792 + 0.625
riorf7 pRi1724 CDS7434 987 + 0.628166
riorf70 pRi1724 CDS84718 759 - 0.592885
riorf71 pRi1724 CDS86022 2277 + 0.597716
riorf72 pRi1724 CDS88479 1125 - 0.584889
riorf73 hypothetical proteinpRi1724 CDS89649 669 - 0.593423
riorf74 pRi1724 CDS90645 1032 + 0.588178
riorf75 pRi1724 CDS91763 1497 + 0.589178
riorf76 pRi1724 CDS93282 963 + 0.610592
riorf77 pRi1724 CDS94246 954 + 0.609015
riorf78 hypothetical proteinpRi1724 CDS95219 684 + 0.606725
riorf79 pRi1724 CDS95984 1503 + 0.628743
riorf8 pRi1724 CDS8497 1893 + 0.593238
riorf80 pRi1724 CDS97438 1602 + 0.629838
riorf81 pRi1724 CDS99105 1959 + 0.622256
riorf82 pRi1724 CDS101085 585 + 0.634188
riorf83 pRi1724 CDS101757 2172 + 0.608195
riorf84 pRi1724 CDS104022 1008 + 0.594246
riorf85 pRi1724 CDS105030 1041 + 0.616715
riorf86 pRi1724 CDS106083 753 + 0.59761
riorf87 pRi1724 CDS106949 189 + 0.566138
riorf88 pRi1724 CDS107137 510 + 0.601961
riorf89 pRi1724 CDS108042 585 + 0.623932
riorf9 pRi1724 CDS10580 495 + 0.59596
riorf90 hypothetical proteinpRi1724 CDS109276 1029 + 0.653061
riorf93 pRi1724 CDS111539 5082 + 0.637544
riorf94 hypothetical proteinpRi1724 CDS117366 1998 - 0.634635
riorf95 pRi1724 CDS119865 888 + 0.647523
riorf96 pRi1724 CDS121101 465 + 0.630108
riorf97 pRi1724 CDS121962 516 + 0.662791
riorf98 pRi1724 CDS122514 327 + 0.59633
riorf99 pRi1724 CDS122840 405 + 0.614815