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2024-04-20 09:25:45

Gene list

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Organism: Plasmid R100

Number of genes found: 166

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Plasmid R100
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA R100 repeat_unit50700 29 + 0.310345
NA R100 repeat_unit25524 11 - 0.272727
NA R100 repeat_unit37438 23 - 0.434783
NA R100 repeat_unit21225 23 + 0.478261
NA R100 repeat_region36132 9147 + 0.399475
NA R100 repeat_unit25546 11 - 0.363636
NA R100 repeat_unit25557 11 - 0.363636
NA R100 repeat_unit15667 25 - 0.52
NA R100 repeat_unit4692 25 + 0.44
NA R100 misc_signal90207 22 - 0.227273
NA R100 repeat_unit25535 11 - 0.454545
NA R100 repeat_unit94269 13 - 0.461538
NA R100 repeat_region4692 11000 + 0.581545
NA R100 repeat_unit25662 11 - 0.363636
NA R100 repeat_region33266 586 + 0.593857
NA R100 repeat_unit50626 35 + 0.114286
NA R100 repeat_unit50668 31 + 0.548387
NA R100 repeat_region47839 586 + 0.593857
NA R100 repeat_unit25618 11 - 0.272727
NA R100 repeat_unit50563 18 + 0.444444
NA R100 repeat_unit50586 44 + 0.25
NA R100 repeat_unit43950 23 + 0.434783
NA R100 repeat_unit19693 38 - 0.473684
NA R100 repeat_unit7398 22 + 0.590909
NA R100 repeat_unit25568 11 - 0.454545
NA R100 repeat_unit8989 23 - 0.521739
NA R100 misc_signal90072 23 - 0.391304
NA R100 repeat_unit25629 11 - 0.272727
NA R100 repeat_unit93514 23 + 0.478261
NA R100 repeat_unit45256 23 - 0.347826
NA R100 repeat_region59 19672 + 0.603497
NA R100 repeat_unit36132 23 + 0.347826
NA R100 repeat_unit25651 11 - 0.363636
NA R100 repeat_unit50789 31 + 0.516129
NA R100 repeat_region30091 439 + 0.603645
NA R100 repeat_unit50749 27 + 0.703704
NA R100 repeat_unit7370 26 + 0.384615
NA R100 repeat_unit21970 23 - 0.347826
NA R100 repeat_unit50712 46 + 0.304348
NA R100 repeat_unit11430 26 - 0.423077
NA R100 repeat_unit25640 11 - 0.545455
NA R100 repeat_unit59 38 + 0.5
32 R100 CDS48847 822 + 0.437956
IS1326 R100 repeat_region7370 4086 + 0.538179
IS1353 R100 repeat_region7398 1614 + 0.563817
IS1a R100 repeat_region21225 768 + 0.536458
IS1b R100 repeat_region93514 768 + 0.536458
X R100 CDS49965 510 - 0.458824
aadA1 streptomycin adenyltransferaseR100 CDS13536 1011 - 0.530168
cat chloramphenycol acetyltransferaseR100 CDS20342 660 - 0.44697
finO fertility inhibition proteinR100 CDS85524 561 + 0.54902
finP R100 misc_RNA51396 2778 - 0.430526
hok post-segregation killing proteinR100 CDS47367 159 + 0.477987
inc R100 misc_RNA88641 93 - 0.462366
insA IS1 transposition proteinR100 CDS93569 276 + 0.536232
insA IS1 transposition proteinR100 CDS21280 276 + 0.536232
insB IS1 transposition proteinR100 CDS21474 504 + 0.551587
insB IS1 transposition proteinR100 CDS93763 504 + 0.551587
intR integrase for In2R100 CDS14476 1014 + 0.612426
istA possible transposase of IS1326R100 CDS9102 1515 + 0.541914
istB NTP-binding proteinR100 CDS10603 786 + 0.501272
merA mercuric (ion) reductaseR100 CDS1747 1695 + 0.651917
merC mercuric transport proteinR100 CDS1234 462 + 0.65368
merD R100 CDS3459 363 + 0.69697
merP mercuric transport proteinR100 CDS962 276 + 0.626812
merR regulatory protein of mer operonR100 CDS92 435 - 0.595402
merT mercuric transport proteinR100 CDS598 351 + 0.612536
mok modulator of Hok proteinR100 CDS47309 213 + 0.492958
pemI plasmid stable inheritance proteinR100 CDS91354 258 + 0.534884
pemK plasmid stable inheritance proteinR100 CDS91544 402 + 0.552239
psiA plasmid SOS inhibition proteinR100 CDS46368 720 + 0.6125
psiB plasmid SOS inhibition proteinR100 CDS45937 435 + 0.574713
qacEdelta1 putative ethidium bromide resistant proteinR100 CDS13025 348 - 0.5
repA1 replication initiation proteinR100 CDS88812 858 + 0.572261
repA2 negative regulator of repA1 expressionR100 CDS88253 255 + 0.435294
repA4 R100 CDS90032 387 + 0.586563
repA6 regulatory reading frameR100 CDS88745 75 + 0.493333
sok R100 misc_RNA47256 66 - 0.439394
ssb single strand DNA binding proteinR100 CDS33830 567 + 0.567901
stbA plasmid stable inheritance proteinR100 CDS24545 963 - 0.390447
stbB plasmid stable inheritance proteinR100 CDS24192 354 - 0.415254
sul1 dihydropteroate synthetase typeIR100 CDS12192 867 - 0.620531
tetA tetracycline resistance proteinR100 CDS41538 1206 + 0.432836
tetC R100 CDS42856 669 - 0.325859
tetD R100 CDS43537 417 + 0.359712
tetR repressor of tet operonR100 CDS40833 624 - 0.402244
tir R100 CDS90608 654 + 0.521407
tniA transposase of In21R100 CDS4833 1680 + 0.647024
tniBdelta1 NTP-binding proteinR100 CDS6515 861 + 0.656214
tnpA transposase for Tn21R100 CDS16731 2967 + 0.633974
tnpM Tn21 modulator proteinR100 CDS15692 351 + 0.635328
tnpR resolvase for Tn21R100 CDS16168 561 + 0.57754
traA prepropilinR100 CDS52535 360 + 0.475
traB R100 CDS54523 1452 + 0.578512
traC R100 CDS59376 2631 + 0.54314
traD R100 CDS76250 2217 + 0.524583
traE R100 CDS53242 567 + 0.462081
traF R100 CDS67095 762 + 0.513123
traG R100 CDS71156 2823 + 0.511867
traH R100 CDS69777 1383 + 0.520607
traI DNA helicase IR100 CDS78466 5271 + 0.599507
traJ positive rugulator of tra operonR100 CDS51467 672 + 0.31994
traK R100 CDS53795 729 + 0.565158
traL R100 CDS52909 312 + 0.474359
traM R100 CDS50890 384 + 0.388021
traN R100 CDS64986 903 + 0.528239
traP R100 CDS55943 588 + 0.510204
traQ possible cleavage protein of preproplinR100 CDS68333 285 + 0.519298
traR R100 CDS57484 222 + 0.454955
traS possible surface exclusion proteinR100 CDS74000 480 + 0.372917
traT surface exclusion proteinR100 CDS74528 732 + 0.494536
traU R100 CDS63015 993 + 0.545821
traV R100 CDS56834 516 + 0.523256
traW R100 CDS62386 633 + 0.597156
traX possible pilin acetylaseR100 CDS83756 747 + 0.576975
traY component of oriT-specific nickaseR100 CDS52275 228 + 0.412281
traZ R100 CDS65901 936 + 0.530983
trbA R100 CDS67870 345 + 0.405797
trbB R100 CDS68604 546 + 0.556777
trbC R100 CDS64351 639 + 0.546166
trbD R100 CDS56469 369 + 0.417344
trbE R100 CDS66860 261 + 0.40613
trbF R100 CDS69374 426 + 0.375587
trbI R100 CDS62003 387 + 0.573643
trbJ R100 CDS69079 348 + 0.448276
yadA R100 CDS3818 237 + 0.691983
yaeA R100 CDS4051 708 + 0.635593
yahA possible transposase of IS1353R100 CDS7426 1545 - 0.565696
ybbA R100 CDS11564 501 - 0.650699
ybjA R100 CDS19764 378 + 0.484127
ycdA R100 CDS23523 237 - 0.413502
ycdB R100 CDS23788 282 + 0.365248
ycgA R100 CDS26060 648 + 0.58179
ycgB R100 CDS26943 435 + 0.574713
ychA R100 CDS27377 828 + 0.611111
yciA R100 CDS28077 573 + 0.623037
yciB R100 CDS28622 426 + 0.544601
ycjA R100 CDS29094 423 + 0.553191
ycjB R100 CDS29568 354 + 0.570621
ydaA R100 CDS30084 252 + 0.65873
ydaB R100 CDS30761 231 + 0.571429
ydbA R100 CDS31043 1362 + 0.572687
ydcA R100 CDS32451 564 + 0.579787
yddA R100 CDS33100 468 - 0.58547
ydeA R100 CDS34448 240 + 0.5125
ydeB R100 CDS34748 1422 + 0.586498
ydgA transposase of Tn10R100 CDS36239 1209 + 0.450786
ydhA R100 CDS37813 1206 - 0.394693
ydjA R100 CDS39462 321 + 0.34891
ydjB R100 CDS39673 489 + 0.376278
yeaA R100 CDS40169 687 + 0.416303
yedA transposase of Tn10R100 CDS43963 1209 - 0.449132
yefA R100 CDS45293 576 + 0.579861
yehA R100 CDS47763 378 - 0.600529
yeiA R100 CDS48440 297 + 0.474747
yfhA R100 CDS57698 414 + 0.442029
yfiA R100 CDS58104 474 + 0.453586
yfiB R100 CDS58657 219 + 0.43379
yfiC R100 CDS58903 348 + 0.37069
ygeA R100 CDS64031 312 + 0.349359
yhfA R100 CDS75417 783 + 0.461047
yieA R100 CDS84561 861 + 0.440186
yigA R100 CDS86213 213 + 0.661972
yigB R100 CDS86669 462 + 0.484848
yihA R100 CDS87423 591 + 0.499154
yjcA R100 CDS92230 1311 + 0.345538