Gene list
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Organism: Yersinia enterocolitica, W22703
Number of genes found: 80
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Yersinia enterocolitica, W22703 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | pYVe227 | repeat_region | 58959 | 4584 | + | 0.517888 | ||
NA | pYVe227 | LTR | 58959 | 48 | + | 0.458333 | ||
NA | pYVe227 | rep_origin | 53 | 151 | + | 0.324503 | ||
NA | pYVe227 | repeat_region | 12254 | 217 | - | 0.451613 | ||
NA | pYVe227 | repeat_region | 47898 | 33 | + | 0.484848 | ||
NA | unknown | pYVe227 | CDS | 50865 | 471 | + | 0.492569 | |
NA | unknown | pYVe227 | CDS | 12760 | 276 | - | 0.365942 | |
NA | pYVe227 | repeat_region | 47941 | 33 | + | 0.484848 | ||
NA | pYVe227 | repeat_region | 43916 | 1245 | + | 0.485141 | ||
NA | unknown | pYVe227 | CDS | 1616 | 468 | + | 0.448718 | |
NA | unknown | pYVe227 | CDS | 47001 | 243 | - | 0.452675 | |
NA | unknown | pYVe227 | CDS | 889 | 546 | - | 0.388278 | |
NA | pYVe227 | LTR | 63542 | 48 | + | 0.458333 | ||
NA | pYVe227 | repeat_region | 10151 | 216 | - | 0.458333 | ||
NA | unknown | pYVe227 | CDS | 4485 | 276 | + | 0.369565 | |
NA | pYVe227 | LTR | 45126 | 35 | + | 0.457143 | ||
NA | pYVe227 | LTR | 43916 | 35 | + | 0.4 | ||
arsB | arsenite pump transmembrane protein ArsB | pYVe227 | CDS | 61041 | 1290 | - | 0.547287 | |
arsC | arsenate reductase ArsC | pYVe227 | CDS | 60603 | 426 | - | 0.495305 | |
arsH | arsenic resistance protein ArsH | pYVe227 | CDS | 62781 | 699 | + | 0.536481 | |
arsR | arsenite inducible repressor ArsR | pYVe227 | CDS | 62342 | 354 | - | 0.531073 | |
lcrD | LcrD (YscV) | pYVe227 | CDS | 19447 | 2115 | - | 0.464775 | |
lcrG | LcrG | pYVe227 | CDS | 18681 | 288 | - | 0.454861 | |
lcrR | LcrR | pYVe227 | CDS | 19010 | 441 | - | 0.489796 | |
lcrV | LcrV | pYVe227 | CDS | 17705 | 975 | - | 0.374359 | |
nuc | putative endonuclease Nuc | pYVe227 | CDS | 67432 | 543 | + | 0.508287 | |
pprA | PprA | pYVe227 | CDS | 58384 | 453 | - | 0.368653 | |
repA | RepA | pYVe227 | CDS | 68675 | 867 | + | 0.545559 | |
repB | RepB | pYVe227 | CDS | 68112 | 255 | + | 0.431373 | |
spyA | SpyA | pYVe227 | CDS | 49082 | 1209 | - | 0.43507 | |
spyB | SpyB | pYVe227 | CDS | 48120 | 966 | - | 0.42029 | |
sycD | chaperone SycD | pYVe227 | CDS | 17196 | 507 | - | 0.443787 | |
sycE | YopE chaperone SycE | pYVe227 | CDS | 45325 | 393 | - | 0.414758 | |
sycH | YopH chaperone SycH | pYVe227 | CDS | 43292 | 426 | - | 0.422535 | |
sycN | YopN chaperone SycN | pYVe227 | CDS | 22254 | 372 | - | 0.524194 | |
sycT | YopT chaperone SycT | pYVe227 | CDS | 9407 | 393 | + | 0.409669 | |
tnpA | transposase TnpA | pYVe227 | CDS | 58992 | 852 | - | 0.514085 | |
tnpR | resolvase TnpR | pYVe227 | CDS | 60004 | 582 | + | 0.513746 | |
traI | TraI | pYVe227 | CDS | 63642 | 450 | + | 0.582222 | |
traX | TraX | pYVe227 | CDS | 65744 | 333 | + | 0.522523 | |
tyeA | TyeA | pYVe227 | CDS | 22612 | 279 | - | 0.430108 | |
virF | transcriptional activator VirF | pYVe227 | CDS | 32056 | 816 | + | 0.414216 | |
virG | lipoprotein VirG (YscW) | pYVe227 | CDS | 31537 | 396 | + | 0.449495 | |
yadA | adhesin YadA | pYVe227 | CDS | 55753 | 1365 | + | 0.428571 | |
ylpA | lipoprotein YlpA | pYVe227 | CDS | 6151 | 750 | - | 0.481333 | |
yomA | YomA | pYVe227 | CDS | 57187 | 876 | + | 0.344749 | |
yopB | translocator YopB | pYVe227 | CDS | 16013 | 1206 | - | 0.465174 | |
yopD | translocator YopD | pYVe227 | CDS | 15074 | 921 | - | 0.435396 | |
yopE | Yop effector YopE | pYVe227 | CDS | 45910 | 660 | + | 0.515152 | |
yopH | Yop effector YopH | pYVe227 | CDS | 41658 | 1407 | + | 0.471215 | |
yopM | Yop effector YopM | pYVe227 | CDS | 13197 | 1104 | + | 0.399457 | |
yopN | YopN | pYVe227 | CDS | 22871 | 882 | - | 0.45805 | |
yopO | protein kinase YopO | pYVe227 | CDS | 2091 | 2190 | + | 0.484931 | |
yopP | Yop effector YopP | pYVe227 | CDS | 4761 | 867 | + | 0.342561 | |
yopQ | YopQ | pYVe227 | CDS | 7370 | 549 | - | 0.335155 | |
yopT | Yop effector YopT | pYVe227 | CDS | 8439 | 969 | + | 0.430341 | |
yscA | YscA | pYVe227 | CDS | 32949 | 99 | + | 0.313131 | |
yscB | YscB | pYVe227 | CDS | 33273 | 414 | + | 0.415459 | |
yscC | secretin YscC | pYVe227 | CDS | 33692 | 1824 | + | 0.453947 | |
yscD | YscD | pYVe227 | CDS | 35512 | 1257 | + | 0.470963 | |
yscE | YscE | pYVe227 | CDS | 36765 | 201 | + | 0.427861 | |
yscF | YscF | pYVe227 | CDS | 36966 | 264 | + | 0.424242 | |
yscG | YscG | pYVe227 | CDS | 37231 | 348 | + | 0.433908 | |
yscH | secreted protein YopR | pYVe227 | CDS | 37575 | 498 | + | 0.437751 | |
yscI | YscI | pYVe227 | CDS | 38073 | 348 | + | 0.471264 | |
yscJ | YscJ | pYVe227 | CDS | 38427 | 735 | + | 0.434014 | |
yscK | YscK | pYVe227 | CDS | 39161 | 630 | + | 0.48254 | |
yscL | YscL | pYVe227 | CDS | 39736 | 672 | + | 0.447917 | |
yscM1 | regulatory protein YscM1 | pYVe227 | CDS | 40626 | 348 | + | 0.491379 | |
yscM2 | regulatory protein YscM2 | pYVe227 | CDS | 53135 | 363 | + | 0.374656 | |
yscN | ATPase YscN | pYVe227 | CDS | 23950 | 1320 | + | 0.508333 | |
yscO | YscO | pYVe227 | CDS | 25266 | 465 | + | 0.449462 | |
yscP | YscP | pYVe227 | CDS | 25730 | 1548 | + | 0.485788 | |
yscQ | YscQ | pYVe227 | CDS | 27274 | 924 | + | 0.483766 | |
yscR | YscR | pYVe227 | CDS | 28194 | 654 | + | 0.429664 | |
yscS | YscS | pYVe227 | CDS | 28849 | 267 | + | 0.453184 | |
yscT | YscT | pYVe227 | CDS | 29112 | 786 | + | 0.431298 | |
yscU | YscU | pYVe227 | CDS | 29897 | 1065 | + | 0.435681 | |
yscX | YscX | pYVe227 | CDS | 21889 | 369 | - | 0.498645 | |
yscY | YscY | pYVe227 | CDS | 21548 | 345 | - | 0.457971 |