Gene list
Applied filters:
Organism: Plasmid ColIb-P9
Number of genes found: 140
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Plasmid ColIb-P9 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | ColIb-P9 | repeat_unit | 89639 | 141 | + | 0.51773 | ||
NA | ColIb-P9 | repeat_unit | 39644 | 17 | + | 0.411765 | ||
NA | ColIb-P9 | repeat_unit | 37850 | 325 | + | 0.627692 | ||
NA | ColIb-P9 | repeat_unit | 27754 | 498 | + | 0.654619 | ||
NA | ColIb-P9 | repeat_unit | 34787 | 494 | + | 0.653846 | ||
NA | ColIb-P9 | oriT | 39622 | 110 | + | 0.536364 | ||
NA | ColIb-P9 | repeat_unit | 90353 | 141 | + | 0.546099 | ||
NA | ColIb-P9 | repeat_unit | 18601 | 20 | + | 0.15 | ||
NA | ColIb-P9 | repeat_unit | 18643 | 20 | + | 0.2 | ||
NA | ColIb-P9 | repeat_unit | 48668 | 104 | + | 0.423077 | ||
NA | ColIb-P9 | repeat_unit | 18742 | 20 | + | 0.2 | ||
NA | ColIb-P9 | repeat_unit | 4474 | 20 | - | 0.25 | ||
NA | ColIb-P9 | repeat_unit | 26108 | 354 | + | 0.652542 | ||
NA | ColIb-P9 | repeat_unit | 18708 | 20 | + | 0.25 | ||
NA | ColIb-P9 | repeat_unit | 71853 | 26 | + | 0.576923 | ||
NA | ColIb-P9 | repeat_unit | 48867 | 151 | + | 0.476821 | ||
NA | ColIb-P9 | conflict | 334 | 1 | + | 1 | ||
NA | ColIb-P9 | repeat_unit | 76660 | 19 | - | 0.631579 | ||
NA | ColIb-P9 | repeat_unit | 48247 | 152 | + | 0.486842 | ||
NA | ColIb-P9 | repeat_unit | 4453 | 21 | + | 0.238095 | ||
NA | ColIb-P9 | repeat_unit | 77188 | 19 | + | 0.631579 | ||
NA | ColIb-P9 | repeat_unit | 33744 | 355 | + | 0.653521 | ||
NA | ColIb-P9 | repeat_unit | 18679 | 20 | + | 0.4 | ||
NA | ColIb-P9 | repeat_unit | 77161 | 29 | - | 0.62069 | ||
NA | ColIb-P9 | repeat_unit | 39667 | 17 | - | 0.411765 | ||
NA | ColIb-P9 | repeat_unit | 77743 | 19 | - | 0.631579 | ||
NA | ColIb-P9 | repeat_unit | 18789 | 20 | + | 0.15 | ||
NA | ColIb-P9 | repeat_unit | 76687 | 19 | + | 0.684211 | ||
NA | ColIb-P9 | repeat_unit | 93039 | 26 | + | 0.615385 | ||
NA | ColIb-P9 | repeat_unit | 76154 | 19 | + | 0.631579 | ||
ard | anti-restriction protein | ColIb-P9 | CDS | 34105 | 501 | + | 0.552894 | |
cib | colicin Ib protein | ColIb-P9 | CDS | 8294 | 1881 | + | 0.458267 | |
exc | surface exclusion protein | ColIb-P9 | CDS | 49928 | 663 | - | 0.395173 | |
ibfA (abi) | abortive infection protein | ColIb-P9 | CDS | 13401 | 345 | - | 0.478261 | |
ibfC | abortive infection protein | ColIb-P9 | CDS | 13935 | 147 | - | 0.47619 | |
imm | immunity protein for colicin Ib | ColIb-P9 | CDS | 10192 | 348 | - | 0.336207 | |
impA | ColIb-P9 | CDS | 21492 | 438 | - | 0.557078 | ||
impB | ColIb-P9 | CDS | 20218 | 1275 | - | 0.515294 | ||
impC | ColIb-P9 | CDS | 21926 | 249 | - | 0.514056 | ||
inc | inc RNA | ColIb-P9 | misc_RNA | 292 | 72 | - | 0.472222 | |
nikA | relaxosome component | ColIb-P9 | CDS | 39728 | 333 | + | 0.426426 | |
nikB | relaxase | ColIb-P9 | CDS | 40071 | 2700 | + | 0.519259 | |
nuc | nuclease | ColIb-P9 | CDS | 68375 | 552 | - | 0.496377 | |
parA | ColIb-P9 | CDS | 18827 | 981 | + | 0.440367 | ||
parB | ColIb-P9 | CDS | 19800 | 417 | + | 0.429257 | ||
pilI | ColIb-P9 | CDS | 89362 | 300 | - | 0.573333 | ||
pilJ | ColIb-P9 | CDS | 88899 | 297 | - | 0.380471 | ||
pilK | ColIb-P9 | CDS | 88309 | 594 | - | 0.36532 | ||
pilL | lipoprotein | ColIb-P9 | CDS | 87208 | 1068 | - | 0.502809 | |
pilM | ColIb-P9 | CDS | 86771 | 438 | - | 0.484018 | ||
pilN | lipoprotein | ColIb-P9 | CDS | 85075 | 1683 | - | 0.492573 | |
pilO | ColIb-P9 | CDS | 83787 | 1296 | - | 0.489969 | ||
pilP | ColIb-P9 | CDS | 83348 | 453 | - | 0.439294 | ||
pilQ | ATP-binding protein | ColIb-P9 | CDS | 81784 | 1554 | - | 0.469755 | |
pilR | integral membrane protein | ColIb-P9 | CDS | 80674 | 1098 | - | 0.441712 | |
pilS | typeIV prepilin | ColIb-P9 | CDS | 80042 | 615 | - | 0.437398 | |
pilT | ColIb-P9 | CDS | 79472 | 561 | - | 0.43672 | ||
pilU | prepilin peptidase | ColIb-P9 | CDS | 78831 | 657 | - | 0.420091 | |
pilV | typeIV prepilin | ColIb-P9 | CDS | 77407 | 1425 | - | 0.469474 | |
pndA | post-segregation killing protein | ColIb-P9 | CDS | 47677 | 156 | + | 0.461538 | |
pndC | counter protein for PndA | ColIb-P9 | CDS | 47541 | 285 | + | 0.470175 | |
psiA | plasmid SOS inhibition protein | ColIb-P9 | CDS | 31633 | 720 | + | 0.559722 | |
psiB | plasmid SOS inhibition protein | ColIb-P9 | CDS | 31202 | 435 | + | 0.544828 | |
rci | shufflon-specific recombinase | ColIb-P9 | CDS | 74948 | 1155 | - | 0.488312 | |
repY | ColIb-P9 | CDS | 378 | 90 | + | 0.5 | ||
repZ | replication initiation protein | ColIb-P9 | CDS | 455 | 1032 | + | 0.562016 | |
resA | resolvase | ColIb-P9 | CDS | 16415 | 780 | + | 0.589744 | |
shfA | shufflon protein A | ColIb-P9 | CDS | 77201 | 210 | + | 0.490476 | |
shfB | shufflon protein B | ColIb-P9 | CDS | 76167 | 246 | + | 0.402439 | |
shfB' | shufflon protein B' | ColIb-P9 | CDS | 76414 | 252 | - | 0.488095 | |
shfC | shufflon protein C | ColIb-P9 | CDS | 76915 | 252 | - | 0.444444 | |
shfC' | shufflon protein C' | ColIb-P9 | CDS | 76700 | 219 | + | 0.424658 | |
sogL | DNA primase | ColIb-P9 | CDS | 64518 | 3768 | - | 0.543524 | |
sogS | DNA primase | ColIb-P9 | CDS | 64518 | 2535 | - | 0.527811 | |
ssb | single-stranded DNA binding protein | ColIb-P9 | CDS | 28321 | 528 | + | 0.602273 | |
ter | ColIb-P9 | misc_signal | 2019 | 22 | + | 0.227273 | ||
traA | ColIb-P9 | CDS | 92413 | 288 | - | 0.447917 | ||
traB | ColIb-P9 | CDS | 91438 | 534 | - | 0.43633 | ||
traC | ColIb-P9 | CDS | 90502 | 684 | - | 0.501462 | ||
traE | ColIb-P9 | CDS | 73973 | 825 | - | 0.435152 | ||
traF | ColIb-P9 | CDS | 72685 | 1203 | - | 0.468828 | ||
traG | ColIb-P9 | CDS | 72041 | 585 | - | 0.401709 | ||
traH | ColIb-P9 | CDS | 71188 | 459 | - | 0.511983 | ||
traI | ColIb-P9 | CDS | 70373 | 819 | - | 0.525031 | ||
traJ | ATP-binding protein | ColIb-P9 | CDS | 69228 | 1149 | - | 0.515231 | |
traK | ColIb-P9 | CDS | 68941 | 291 | - | 0.498282 | ||
traL | ColIb-P9 | CDS | 64153 | 348 | - | 0.528736 | ||
traM | ColIb-P9 | CDS | 63464 | 693 | - | 0.50938 | ||
traN | ColIb-P9 | CDS | 62470 | 984 | - | 0.54065 | ||
traO | ColIb-P9 | CDS | 61178 | 1290 | - | 0.510078 | ||
traP | ColIb-P9 | CDS | 60474 | 705 | - | 0.506383 | ||
traQ | ColIb-P9 | CDS | 59947 | 528 | - | 0.524621 | ||
traR | ColIb-P9 | CDS | 59492 | 405 | - | 0.501235 | ||
traS | ColIb-P9 | CDS | 59240 | 189 | - | 0.486772 | ||
traT | ColIb-P9 | CDS | 58456 | 801 | - | 0.508115 | ||
traU | ColIb-P9 | CDS | 55322 | 3045 | - | 0.508703 | ||
traV | ColIb-P9 | CDS | 54708 | 615 | - | 0.521951 | ||
traW | ColIb-P9 | CDS | 53539 | 1203 | - | 0.530341 | ||
traX | ColIb-P9 | CDS | 52926 | 585 | - | 0.483761 | ||
traY | ColIb-P9 | CDS | 50661 | 2238 | - | 0.466041 | ||
trbA | ColIb-P9 | CDS | 46180 | 1209 | - | 0.511993 | ||
trbB | ColIb-P9 | CDS | 45091 | 1071 | - | 0.511671 | ||
trbC | ColIb-P9 | CDS | 42807 | 2292 | - | 0.498255 | ||
trcD | ColIb-P9 | CDS | 89778 | 552 | - | 0.532609 | ||
yacA | ColIb-P9 | CDS | 2395 | 270 | + | 0.514815 | ||
yacB | ColIb-P9 | CDS | 2661 | 282 | + | 0.539007 | ||
yacC | ColIb-P9 | CDS | 2982 | 849 | + | 0.563015 | ||
yadA | ColIb-P9 | CDS | 3971 | 450 | + | 0.502222 | ||
yaeA | ColIb-P9 | CDS | 4555 | 234 | + | 0.397436 | ||
yaeB | ColIb-P9 | CDS | 4897 | 270 | - | 0.385185 | ||
yafA | ColIb-P9 | CDS | 5163 | 495 | - | 0.377778 | ||
yafB | ColIb-P9 | CDS | 5713 | 603 | - | 0.504146 | ||
yagA | ColIb-P9 | CDS | 6669 | 1347 | + | 0.478099 | ||
ybaA | ColIb-P9 | CDS | 10658 | 321 | + | 0.551402 | ||
ybbA | ColIb-P9 | CDS | 11010 | 753 | + | 0.618858 | ||
ybcA | ColIb-P9 | CDS | 12167 | 1059 | + | 0.545798 | ||
ybeA | ColIb-P9 | CDS | 14269 | 210 | + | 0.652381 | ||
ybeB | ColIb-P9 | CDS | 14609 | 882 | + | 0.577098 | ||
ybfA | ColIb-P9 | CDS | 15961 | 453 | + | 0.567329 | ||
ybhA | ColIb-P9 | CDS | 17341 | 678 | + | 0.423304 | ||
ybiA | ColIb-P9 | CDS | 18105 | 309 | + | 0.446602 | ||
yccA | ColIb-P9 | CDS | 22285 | 270 | + | 0.625926 | ||
yccB | ColIb-P9 | CDS | 22568 | 927 | + | 0.545847 | ||
ycdA | ColIb-P9 | CDS | 23491 | 312 | + | 0.628205 | ||
ycdB | ColIb-P9 | CDS | 23879 | 684 | + | 0.554094 | ||
yceA | ColIb-P9 | CDS | 24563 | 222 | + | 0.531532 | ||
yceB | ColIb-P9 | CDS | 24796 | 435 | + | 0.565517 | ||
ycfA | ColIb-P9 | CDS | 25281 | 771 | + | 0.607004 | ||
ycgA | ColIb-P9 | CDS | 26026 | 471 | + | 0.619958 | ||
ycgB | ColIb-P9 | CDS | 26469 | 426 | + | 0.532864 | ||
ycgC | ColIb-P9 | CDS | 26941 | 423 | + | 0.565012 | ||
ychA | ColIb-P9 | CDS | 27622 | 348 | + | 0.655172 | ||
ycjA | ColIb-P9 | CDS | 29108 | 2040 | + | 0.588726 | ||
ydcA | transposase | ColIb-P9 | CDS | 32476 | 1182 | + | 0.485618 | |
yddA | ColIb-P9 | CDS | 33714 | 471 | + | 0.626327 | ||
ydfA | ColIb-P9 | CDS | 35334 | 435 | + | 0.581609 | ||
ydfB | ColIb-P9 | CDS | 35860 | 267 | + | 0.58427 | ||
ydgA | ColIb-P9 | CDS | 36191 | 942 | + | 0.538217 | ||
ydhA | ColIb-P9 | CDS | 37766 | 336 | + | 0.592262 | ||
ydiA | ColIb-P9 | CDS | 38226 | 849 | + | 0.51119 |